BLASTX nr result

ID: Paeonia22_contig00023557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00023557
         (381 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004174148.1| PREDICTED: uncharacterized protein LOC101232...    64   2e-08
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A...    64   3e-08
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    62   8e-08
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A...    61   1e-07
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    59   9e-07
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    58   1e-06
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    57   4e-06
ref|XP_004149975.1| PREDICTED: uncharacterized protein LOC101222...    56   6e-06

>ref|XP_004174148.1| PREDICTED: uncharacterized protein LOC101232502 [Cucumis sativus]
          Length = 191

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +3

Query: 120 NVSSPDKVIWLPTN-GSFSI*SV*HCLRALLPKVEWSNIVWHKGHIPKVAFITWLAVRNG 296
           ++S  D+ +W+P +  SFSI SV   +R    +V WS ++W  G+IPK +F  WLA+R+ 
Sbjct: 74  SLSVEDRWVWVPGSLDSFSIASVWETIRPHSSRVGWSGLLWGGGNIPKHSFYAWLAIRDM 133

Query: 297 LATQDKFIYWRSIKTMSCVVC 359
           L T+D+   W     +SC++C
Sbjct: 134 LGTRDRLSRWDRSIPLSCMLC 154


>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 342

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = +3

Query: 126 SSPDKVIWLP-TNGSFSI*SV*HCLRALLPKVEWSNIVWHKGHIPKVAFITWLAVRNGLA 302
           S  D+ +W+P +  SFSI S    +R    +V WS ++W  G+IPK +F  WLA+R+ L+
Sbjct: 166 SVEDRWVWVPGSRDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLS 225

Query: 303 TQDKFIYWRSIKTMSCVVC 359
           T+D+   W     +SC++C
Sbjct: 226 TRDRLSRWDRSIPLSCLLC 244


>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +3

Query: 117 LNVSSPDKVIWLP-TNGSFSI*SV*HCLRALLPKVEWSNIVWHKGHIPKVAFITWLAVRN 293
           L+ S  D+ +W+P ++ SFSI S    +R    +V WS ++W  G+IPK +F  WLA+R+
Sbjct: 90  LSPSVEDRWVWVPGSHDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRD 149

Query: 294 GLATQDKFIYWRSIKTMSCVVC 359
            L T+ +   W     +SC++C
Sbjct: 150 RLGTRGRLSRWDRSIPLSCLLC 171


>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 288

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
 Frame = +3

Query: 144 IWLPTNGS---FSI*SV*HCLRALLPKVEWSNIVWHKGHIPKVAFITWLAVRNGLATQDK 314
           +W+   GS   FSI S    +R    +V WS ++W  G+IPK +F TWLA+++ L T+D+
Sbjct: 172 MWVRVPGSHESFSIVSACEAIRPHSSRVGWSGLLWGGGNIPKHSFYTWLAIKDRLGTRDR 231

Query: 315 FIYWRSIKTMSCVVC 359
              W S   +SC++C
Sbjct: 232 LSRWDSSIPLSCILC 246


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +3

Query: 126 SSPDKVIWLPTN-GSFSI*SV*HCLRALLPKVEWSNIVWHKGHIPKVAFITWLAVRNGLA 302
           S  D+ +W+P +  SFSI S    +R    +V WS ++W +G+IPK +F  WLA+R+ L 
Sbjct: 280 SVEDRWVWVPGSLDSFSIASAWETIRPHSSRVGWSGLLWDRGNIPKHSFYAWLAIRDRLG 339

Query: 303 TQDKFIYW-RSI 335
           T+D+   W RSI
Sbjct: 340 TRDRLSQWDRSI 351


>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
 Frame = +3

Query: 69  SRS-NVIFEIIENC---SMVLN--VSSPDKVIWLPTNGS-----FSI*SV*HCLRALLPK 215
           SRS N I ++++NC   S V+N  V + D +      GS     FS  +    L  +  K
Sbjct: 82  SRSRNPIIQLLKNCLPLSSVVNLQVDAEDDLFMWKVGGSEASVGFSSAATWIHLNPVGEK 141

Query: 216 VEWSNIVWHKGHIPKVAFITWLAVRNGLATQDKFIYWRSIKTMSCVVC 359
           V+W   +W KG IPK AFI+W+ +R+ L T+DK + W       C++C
Sbjct: 142 VDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLC 189


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +3

Query: 123 VSSPDKVIWLPTNG----SFSI*SV*HCLRALLPKVEWSNIVWHKGHIPKVAFITWLAVR 290
           V + D V+W    G    SFS        R   P+ EW   +W     PK +FITWLA +
Sbjct: 238 VETEDVVLWKGKGGRFKPSFSTKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATK 297

Query: 291 NGLATQDKFIYWRSIKTMSCVVCR 362
           N L+T D+ + W +   +SCV C+
Sbjct: 298 NRLSTGDRMMSWNAGVNLSCVFCQ 321


>ref|XP_004149975.1| PREDICTED: uncharacterized protein LOC101222747 [Cucumis sativus]
          Length = 163

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = +3

Query: 126 SSPDKVIWLP-TNGSFSI*SV*HCLRALLPKVEWSNIVWHKGHIPKVAFITWLAVRNGLA 302
           S  D+ +W+P ++ SF I S    +R    +V WS+++W  G+IPK +F  WLA+++ L 
Sbjct: 15  SVEDRWVWVPGSHDSFFITSAWETIRPHSSRVGWSDLLWGGGNIPKHSFCAWLAIKDRLG 74

Query: 303 TQDKFIYWRSIKTMSCVVC 359
           T+D+   W     +S ++C
Sbjct: 75  TRDRLSRWDRSIPLSRLLC 93


Top