BLASTX nr result
ID: Paeonia22_contig00023213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00023213
(587 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 91 3e-16
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle... 89 9e-16
gb|ABA99612.1| retrotransposon protein, putative, unclassified [... 88 2e-15
gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 87 3e-15
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 87 4e-15
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle... 86 6e-15
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle... 86 1e-14
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 86 1e-14
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 86 1e-14
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle... 85 1e-14
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle... 85 1e-14
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle... 85 2e-14
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 84 2e-14
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group] 84 2e-14
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 84 2e-14
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle... 84 3e-14
gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis c... 84 4e-14
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle... 84 4e-14
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza... 84 4e-14
gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halle... 83 6e-14
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 90.5 bits (223), Expect = 3e-16
Identities = 66/189 (34%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFFEE-VYVEQSPGYVKKGEES 198
+FA V R+E + + S Q K + S FLN EE VY+EQ PGY+K GEE
Sbjct: 917 VFAPVVRMETI--RLLISQAAQFKWPIFQMDVKSAFLNGVLEEEVYIEQPPGYMKIGEEK 974
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV +LKKALYGLKQA + + ID F +NG + H+ K
Sbjct: 975 KVLKLKKALYGLKQAPRAWNTRIDTYFKENGFKQCPYE-HALYAKNNGGNMIFVALYVDD 1033
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
++ F G G F +EV+Q + GIF+SQ+KYAK++L+++
Sbjct: 1034 LIFMGNNNDMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQKETGIFVSQEKYAKEILKKY 1093
Query: 559 KMGEALPCS 585
KM P S
Sbjct: 1094 KMENCNPVS 1102
>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 89.0 bits (219), Expect = 9e-16
Identities = 68/187 (36%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q + K + +K S FLN +F EEVY+EQ GY+ KGEE+
Sbjct: 79 VFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDFEEEVYIEQPQGYIVKGEEN 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L+RF
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKRF 255
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 256 KMDDSNP 262
>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 88.2 bits (217), Expect = 2e-15
Identities = 71/195 (36%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Frame = +1
Query: 16 YNIFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFF-EEVYVEQSPGYVKKGE 192
Y +A V RLE + Q + K + +K S FLN + EE+YVEQ G+ +G
Sbjct: 787 YETYAPVARLETIRTIIALAAQKRWKIYQLDVK--SAFLNGYLDEEIYVEQPEGFSVQGG 844
Query: 193 ESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXX 372
E+KV RLKKALYGLKQA + YS ID F++ G TL K
Sbjct: 845 ENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGF--AKSISEPTLYVNKTGTDILIVSLY 902
Query: 373 XXXXXY*Q**SLV*RFLGNYEERIRD-----------D*YGASLSFPWIEVKQSDEGIFL 519
Y GN E+ ++D G F +EV QSDEGIF+
Sbjct: 903 VDDLIY----------TGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFI 952
Query: 520 SQKKYAKDLLRRFKM 564
SQ+KYAK++L++FKM
Sbjct: 953 SQRKYAKNILKKFKM 967
>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 87.4 bits (215), Expect = 3e-15
Identities = 70/195 (35%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Frame = +1
Query: 16 YNIFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFF-EEVYVEQSPGYVKKGE 192
Y +A V RLE + Q + K + +K S FLN + EE+YVEQ G+ +G
Sbjct: 714 YETYAPVARLETIRTIIALAAQKRWKIYQLDVK--SAFLNGYLDEEIYVEQPEGFSVQGG 771
Query: 193 ESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXX 372
E+KV RLKKALYGLKQA + YS ID F++ G TL K
Sbjct: 772 ENKVFRLKKALYGLKQAPRVWYSQIDKYFIQKGF--AKSISEPTLYVNKTGTDILIVSLY 829
Query: 373 XXXXXY*Q**SLV*RFLGNYEERIRD-----------D*YGASLSFPWIEVKQSDEGIFL 519
Y GN E+ ++D G F +EV QSDEGIF+
Sbjct: 830 VDDLIY----------TGNSEKMMQDFKKDMMHTYEMSDLGLLYYFLGMEVHQSDEGIFI 879
Query: 520 SQKKYAKDLLRRFKM 564
SQ+KYA+++L++FKM
Sbjct: 880 SQRKYAENILKKFKM 894
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 86.7 bits (213), Expect = 4e-15
Identities = 70/195 (35%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Frame = +1
Query: 16 YNIFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFF-EEVYVEQSPGYVKKGE 192
Y +A V RLE + Q + K + +K S FLN + EE+YVEQ G+ +G
Sbjct: 924 YETYAPVARLETIRTIIALAAQKRWKIYQLDVK--SAFLNGYLDEEIYVEQPEGFSVQGG 981
Query: 193 ESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXX 372
E+KV RLKKALYGLKQA + YS ID F++ G TL K
Sbjct: 982 ENKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGF--AKSISEPTLYVNKTGTDILIVSLY 1039
Query: 373 XXXXXY*Q**SLV*RFLGNYEERIRD-----------D*YGASLSFPWIEVKQSDEGIFL 519
Y GN E+ ++D G F +EV QSDEGIF+
Sbjct: 1040 VDDLIY----------TGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFI 1089
Query: 520 SQKKYAKDLLRRFKM 564
SQ+KYA+++L++FKM
Sbjct: 1090 SQRKYAENILKKFKM 1104
>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 86.3 bits (212), Expect = 6e-15
Identities = 66/187 (35%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q + K + +K STFLN + EEVY+EQ GY+ KGEE
Sbjct: 79 VFAPVARLETVRLIISLAAQNKWKIHQMDVK--STFLNGDLEEEVYIEQPQGYIVKGEED 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK+++++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVIKKF 255
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 256 KMDDSNP 262
>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 85.5 bits (210), Expect = 1e-14
Identities = 66/187 (35%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE+
Sbjct: 79 VFALVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEEN 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 255
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 256 KMDDSNP 262
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 85.5 bits (210), Expect = 1e-14
Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 918 VFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 975
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 976 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDD 1034
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 1035 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 1094
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 1095 KMDDSNP 1101
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 85.5 bits (210), Expect = 1e-14
Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 886 VFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 943
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 944 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDD 1002
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 1003 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 1062
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 1063 KMDDSNP 1069
>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 85.1 bits (209), Expect = 1e-14
Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 79 VFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 255
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 256 KMDDSNP 262
>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera] gi|389595484|gb|AFK88545.1| reverse
transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 85.1 bits (209), Expect = 1e-14
Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 79 VFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 255
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 256 KMDDSNP 262
>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 84.7 bits (208), Expect = 2e-14
Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA + RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 79 VFAPIARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 196 LIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 255
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 256 KMDDSNP 262
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 84.3 bits (207), Expect = 2e-14
Identities = 66/187 (35%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
IFA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 415 IFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 472
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKK LYGLKQA + + ID F + H+ KI++
Sbjct: 473 KVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDD 531
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 532 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 591
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 592 KMDDSNP 598
>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1136
Score = 84.3 bits (207), Expect = 2e-14
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Frame = +1
Query: 16 YNIFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFF-EEVYVEQSPGYVKKGE 192
Y +A V RLE + Q + K + +K S FLN + EE+YVEQ + +G
Sbjct: 708 YETYAHVARLETIHTIIALAAQKRWKIYQLDVK--SAFLNGYLDEEIYVEQPERFSVQGG 765
Query: 193 ESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXX 372
E+KV RLKKALYGLKQA + YS ID F++ +G + + +K+
Sbjct: 766 ENKVFRLKKALYGLKQAPRAWYSQIDKYFIQ---KGFAKSISEPILYVKKTGTDILIVSL 822
Query: 373 XXXXXY*Q**SLV*RFLGNYEERIRD-----------D*YGASLSFPWIEVKQSDEGIFL 519
+ GN E+ ++D G F +EV QSDEGIF+
Sbjct: 823 YVDDLI---------YTGNSEKLMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFI 873
Query: 520 SQKKYAKDLLRRFKM 564
SQ+KYA+++L++FKM
Sbjct: 874 SQRKYAENILKKFKM 888
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 84.3 bits (207), Expect = 2e-14
Identities = 66/187 (35%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
IFA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 918 IFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 975
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKK LYGLKQA + + ID F + H+ KI++
Sbjct: 976 KVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKEDILIACLYVDD 1034
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 1035 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 1094
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 1095 KMDDSNP 1101
>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 84.0 bits (206), Expect = 3e-14
Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 79 VFAPVARLETVRLIISLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA ++ + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRSWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKF 255
Query: 559 KMGEALP 579
K+ ++ P
Sbjct: 256 KVDDSNP 262
>gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 83.6 bits (205), Expect = 4e-14
Identities = 65/189 (34%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + Q K + +K S FLN + EEVY+EQ GY+ KGEE+
Sbjct: 79 VFAPVARLETVRLIISLAAQNVWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEEA 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV +LKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLKLKKALYGLKQAPRAWNTRIDKYFKEQDFIKCPYE-HALYIKIQKDDILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++L++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMYYYLGIEVKQEDNGIFITQEGYAKEVLKKF 255
Query: 559 KMGEALPCS 585
K+ ++ P S
Sbjct: 256 KLDDSNPVS 264
>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 83.6 bits (205), Expect = 4e-14
Identities = 65/187 (34%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 22 IFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLN-NFFEEVYVEQSPGYVKKGEES 198
+FA V RLE + + Q + K + +K S FLN + EEVY+EQ GY+ KGEE
Sbjct: 79 VFAPVARLETVRLIILLAAQNKWKIHQMDVK--SAFLNGDLEEEVYIEQPQGYIVKGEED 136
Query: 199 KVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXXXX 378
KV RLKKALYGLKQA + + ID F + H+ KI++
Sbjct: 137 KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE-HALYIKIQKDGILIACLYVDD 195
Query: 379 XXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLRRF 558
S+ F + G + IEVKQ D GIF++Q+ YAK++ ++F
Sbjct: 196 LIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVHKKF 255
Query: 559 KMGEALP 579
KM ++ P
Sbjct: 256 KMDDSNP 262
>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
gi|31429795|gb|AAP51797.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1350
Score = 83.6 bits (205), Expect = 4e-14
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Frame = +1
Query: 16 YNIFAAVNRLENSLKQFVCSWQLQLKEDEEFIK*MSTFLNNFF-EEVYVEQSPGYVKKGE 192
Y +A V RLE + Q + K + +K S FLN + EE+YVEQ G+ +G
Sbjct: 847 YETYAPVARLETIRTIIALAAQKRWKIYQLDVK--SAFLNGYLDEEIYVEQPEGFSVQGG 904
Query: 193 ESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSRGVHMRMHSTLRKIKRVXXXXXXXXX 372
E+KV RLKKALYGLKQA + YS ID F++ G + ST I +
Sbjct: 905 ENKVFRLKKALYGLKQAPRAWYSQIDQYFIQKG----FAKSISTDILIVSLYVDDLIYTA 960
Query: 373 XXXXXY*Q**SLV*RFLGNYEERIRDD*YGASLSFPWIEVKQSDEGIFLSQKKYAKDLLR 552
++ F + G F +EV QSDEGIF+SQ+KYA+++L+
Sbjct: 961 NSE-------KMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILK 1013
Query: 553 RFKM 564
+FKM
Sbjct: 1014 KFKM 1017
>gb|AFK88551.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 82.8 bits (203), Expect = 6e-14
Identities = 56/154 (36%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Frame = +1
Query: 121 STFLN-NFFEEVYVEQSPGYVKKGEESKVCRLKKALYGLKQAQKT*YSHIDNSFLKNGSR 297
S FLN + EEVY+EQ GY+ KGEE+KV RL KALYGLKQA + + ID F +
Sbjct: 110 SAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLNKALYGLKQAPRAWNTRIDKYFKEKDFT 169
Query: 298 GVHMRMHSTLRKIKRVXXXXXXXXXXXXXXY*Q**SLV*RFLGNYEERIRDD*YGASLSF 477
H+ KI++ S+ +F + + G +
Sbjct: 170 KCPYE-HALYIKIQKDDILIACLYVDDLIFTGNNPSMFEKFKKEMTKEFKMTDIGLMSYY 228
Query: 478 PWIEVKQSDEGIFLSQKKYAKDLLRRFKMGEALP 579
IEVKQ D GIF++Q+ YAK++L++FKM ++ P
Sbjct: 229 LGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP 262