BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00023109
         (1739 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun...   721   0.0  
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   717   0.0  
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   706   0.0  
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob...   702   0.0  
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   693   0.0  
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   681   0.0  
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   675   0.0  
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   675   0.0  
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   674   0.0  
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   674   0.0  
ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phas...   667   0.0  
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   664   0.0  
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   663   0.0  
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   659   0.0  
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   657   0.0  
gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus...   655   0.0  
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   651   0.0  
ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   645   0.0  
ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chlor...   642   0.0  
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor...   639   0.0  

>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
            gi|462409392|gb|EMJ14726.1| hypothetical protein
            PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  721 bits (1862), Expect = 0.0
 Identities = 338/408 (82%), Positives = 372/408 (91%)
 Frame = -2

Query: 1534 PTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDLPPLFVADLIH 1355
            PT++ SSVNGYPEY RLLPCP  NGPPRVEH+VV+EGGPVLEYICK LDLPP FVADLIH
Sbjct: 71   PTSV-SSVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIH 129

Query: 1354 FGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQKTFRITHVNEF 1175
            FGAVYYALVCPKPPP+ATPEQ+R+FKEVTAPSVLK R+SIKGKTVREAQKTFRITH +EF
Sbjct: 130  FGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEF 189

Query: 1174 VEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCVTF 995
            VEAGTYLRVHVHPKRFPRCY+IDWKSRIIAV+E +VVLDKPAGT+VGGTTDNIEESC TF
Sbjct: 190  VEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATF 249

Query: 994  ATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXXXXXXXXXXPI 815
            ATRALGLTTPL TTHQIDNCTEGCVVLARTKEYCSVFHGKIREK+VKK          P 
Sbjct: 250  ATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPT 309

Query: 814  GIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYCVMDCGWPSKE 635
            GII HYMRPIN+APRLISE+FI+ W LCQLEV+ECKE+PWPN+ VEE+YCV DCGWPSK+
Sbjct: 310  GIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWPSKD 369

Query: 634  FAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPYGKHKKQYTTE 455
            +AYECKINLLTGRTHQ+RAQLAA GAPIVGDSMYMPAA+AE  SPGLNP+G++KK YTTE
Sbjct: 370  YAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHYTTE 429

Query: 454  NEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWRLE 311
            N++  AV EWIARHGKEPNVAIGLQA QISWDDG+HT+EAR+PWWR +
Sbjct: 430  NDKETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWRCQ 477


>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  717 bits (1851), Expect = 0.0
 Identities = 339/401 (84%), Positives = 367/401 (91%)
 Frame = -2

Query: 1522 TSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDLPPLFVADLIHFGAV 1343
            TSSVNGYPEYHRLLPCP +NGPPRVEH+VV+EGG VL+YI KALDLPPLFVADLIHFGAV
Sbjct: 71   TSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAV 130

Query: 1342 YYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQKTFRITHVNEFVEAG 1163
            YYALVCP+PPPSATPEQ+R+FKEVTAPSVL+KR SIKGKT+REAQKTFRIT VNEFVEAG
Sbjct: 131  YYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAG 190

Query: 1162 TYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFATRA 983
            TYLRVHVHPKRFPRCYEIDWKSRIIAV ESYVVLDKPAGTSVGGTTDNIEESC TFATRA
Sbjct: 191  TYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRA 250

Query: 982  LGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXXXXXXXXXXPIGIID 803
            LGLTTPL+TTHQIDNCTEGCVVLARTKEYCSVFHGKIREK+VKK          PIGI+ 
Sbjct: 251  LGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVT 310

Query: 802  HYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYCVMDCGWPSKEFAYE 623
            HYMRP+N+APRLISE+FIKGWYLCQLEVLECKEVPWP++ +EE+YC+ D GWP K  A++
Sbjct: 311  HYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFK 370

Query: 622  CKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPYGKHKKQYTTENEEL 443
            CKINLLTGRTHQIRAQLAA GAPIVGDSMYMPAAIAE TSPGLNP+GK+KK+YTTEN+  
Sbjct: 371  CKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRE 430

Query: 442  MAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWW 320
             AV EWIA+HGKEP VAIGLQA QISWDDGEH Y+A SPWW
Sbjct: 431  TAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
            gi|550340110|gb|EEE85437.2| pseudouridine synthase family
            protein [Populus trichocarpa]
          Length = 470

 Score =  706 bits (1823), Expect = 0.0
 Identities = 331/428 (77%), Positives = 372/428 (86%)
 Frame = -2

Query: 1600 AFLNCNRRARSCKASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGG 1421
            A + C+   R     S   D   T  TSSVNGYPEY RLLPCP  N PPR+EH+VV+E G
Sbjct: 39   ALVWCSLSKRKLSCESLKQDIACTTATSSVNGYPEYTRLLPCPSHNSPPRIEHLVVSEEG 98

Query: 1420 PVLEYICKALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRS 1241
            PVL+YICKALDLPPLFVADLIHFGAV+YALVCP+PP +ATPEQIR+F+EVTAPSVLKKR+
Sbjct: 99   PVLDYICKALDLPPLFVADLIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRA 158

Query: 1240 SIKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVL 1061
            SIKGKTVREAQKTFRITHV++F+EAG YLRVHVHPKRFPRCY+IDWKSRII V ES+VVL
Sbjct: 159  SIKGKTVREAQKTFRITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVL 218

Query: 1060 DKPAGTSVGGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFH 881
            DKPAGTSVGGTTDNIEESC TFATRALGLT PL+TTHQIDNCTEGCVVLART+E CSVFH
Sbjct: 219  DKPAGTSVGGTTDNIEESCATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFH 278

Query: 880  GKIREKRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEV 701
            GKIREK VKK          PIG+++HYMRPINMAPRL+SEEFIKGW+LCQLEV+ECK V
Sbjct: 279  GKIREKTVKKLYIALAASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRV 338

Query: 700  PWPNSAVEERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAA 521
            PWP++ +EE+YCV DCGWPSK+ AYECKINLLTGRTHQIRAQLAA GAP+VGDSMYMPAA
Sbjct: 339  PWPDAVMEEKYCVQDCGWPSKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAA 398

Query: 520  IAETTSPGLNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTY 341
            +AE  SPG NP+GK+KKQYT+E+++ +AVEEW+  HGKEPNVAIGLQA QISWDDG+H Y
Sbjct: 399  VAEMVSPGCNPFGKYKKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIY 458

Query: 340  EARSPWWR 317
             A SPWWR
Sbjct: 459  NAGSPWWR 466


>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508781387|gb|EOY28643.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 491

 Score =  702 bits (1813), Expect = 0.0
 Identities = 338/443 (76%), Positives = 376/443 (84%), Gaps = 14/443 (3%)
 Frame = -2

Query: 1594 LNCNRRARSCKASSAPADAIPTNITSSVNG--------------YPEYHRLLPCPIENGP 1457
            L  +RR  SC   S   DA  T   +SVNG              YPEYHRLLPCP  NGP
Sbjct: 51   LGSSRRELSCL--STKMDAAQTASATSVNGVLLYFMIEIHFLFSYPEYHRLLPCPSHNGP 108

Query: 1456 PRVEHMVVTEGGPVLEYICKALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFK 1277
            PRVEH+VV+EGGPVLEYICKALDLPP+FVADLIHFGAVYYALVCP+PPPSATPEQIRIFK
Sbjct: 109  PRVEHLVVSEGGPVLEYICKALDLPPMFVADLIHFGAVYYALVCPQPPPSATPEQIRIFK 168

Query: 1276 EVTAPSVLKKRSSIKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKS 1097
            EVTAPSVL KR+SI+GKTVREAQKTFRITHV++FVEAGTYLRVHVHPKRFPRCYEIDWKS
Sbjct: 169  EVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYLRVHVHPKRFPRCYEIDWKS 228

Query: 1096 RIIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVV 917
            RIIAV +SYVVLDKPAGTSVGGTTDNIEESC TFA RALG +TPLKTTHQIDNCTEGCVV
Sbjct: 229  RIIAVTDSYVVLDKPAGTSVGGTTDNIEESCATFANRALGFSTPLKTTHQIDNCTEGCVV 288

Query: 916  LARTKEYCSVFHGKIREKRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWY 737
            LARTKEYCSVFHGKIREK+VKK          PIG+I HYMRPINMAPRL+SE+FIKGWY
Sbjct: 289  LARTKEYCSVFHGKIREKKVKKLYLALTAAPLPIGVITHYMRPINMAPRLVSEDFIKGWY 348

Query: 736  LCQLEVLECKEVPWPNSAVEERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGA 557
            LCQLEV+ECK+VPWP+  ++E YC+ D GWP K+ AYECKINLLTGRTHQ+RAQLAA GA
Sbjct: 349  LCQLEVMECKKVPWPDYVIQENYCIEDSGWPLKDHAYECKINLLTGRTHQVRAQLAACGA 408

Query: 556  PIVGDSMYMPAAIAETTSPGLNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQA 377
            PI+GDSMYMP  IAE  +PGLNP+GK+KK +T+EN++ +A+ EWI++ GKEP+VAIGLQA
Sbjct: 409  PILGDSMYMPPTIAEIANPGLNPFGKYKK-HTSENDKEIAITEWISQFGKEPSVAIGLQA 467

Query: 376  SQISWDDGEHTYEARSPWWRLEK 308
             QISWDDGEH Y+ARSPWWR  K
Sbjct: 468  CQISWDDGEHFYKARSPWWRSRK 490


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  693 bits (1788), Expect = 0.0
 Identities = 330/450 (73%), Positives = 381/450 (84%)
 Frame = -2

Query: 1666 VRTLVTAPALXXXXXXXXNATSAFLNCNRRARSCKASSAPADAIPTNITSSVNGYPEYHR 1487
            +RTL +  A         NA + F   +   + C  SS P  A  TN TS VNG  +Y R
Sbjct: 24   LRTLASTHAYSFHRHHPKNALARFSLNSHERKFCCESSKPEVAYTTN-TSCVNGNSDYDR 82

Query: 1486 LLPCPIENGPPRVEHMVVTEGGPVLEYICKALDLPPLFVADLIHFGAVYYALVCPKPPPS 1307
            LLPCP  N PPR+EH+VV E GPVL+YICKALDLPPLFVADLI FGAV+YALVCP+PP +
Sbjct: 83   LLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLPPLFVADLIDFGAVHYALVCPRPPTT 142

Query: 1306 ATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRF 1127
            ATPEQIR+F++ TAPSVLKKRSSIKGKTVREAQKTFRITHV++++EAGTYLRVHVHPKRF
Sbjct: 143  ATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTYLRVHVHPKRF 202

Query: 1126 PRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFATRALGLTTPLKTTHQ 947
            PRCY+IDWKSRIIAV + YVVLDKPAGTSVGGT DNIEESC TFATRALGLTTPLKTTHQ
Sbjct: 203  PRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRALGLTTPLKTTHQ 262

Query: 946  IDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRL 767
            IDNCTEGCVVLAR+KEYCSVFHGKIREK+VKK          P+G+I +YMRP+N+APRL
Sbjct: 263  IDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIKNYMRPVNIAPRL 322

Query: 766  ISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYCVMDCGWPSKEFAYECKINLLTGRTHQ 587
            +SEEF+ GW+LCQLEVLEC++VPWP++A+EE+Y V DCGWPSK+FAYECKINLLTGRTHQ
Sbjct: 323  LSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPSKDFAYECKINLLTGRTHQ 382

Query: 586  IRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPYGKHKKQYTTENEELMAVEEWIARHGK 407
            IRAQLAA GAP+VGDSMYMPAA+AE  +PGLNP+GKH+KQYT E++E MAV EW+A+HGK
Sbjct: 383  IRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYTNESDESMAVAEWVAQHGK 442

Query: 406  EPNVAIGLQASQISWDDGEHTYEARSPWWR 317
            EP VAIGLQA +ISWD+G+H Y+A SPWWR
Sbjct: 443  EPKVAIGLQACEISWDEGKHIYKAGSPWWR 472


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
            gi|557551677|gb|ESR62306.1| hypothetical protein
            CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  681 bits (1756), Expect = 0.0
 Identities = 318/402 (79%), Positives = 362/402 (90%)
 Frame = -2

Query: 1522 TSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDLPPLFVADLIHFGAV 1343
            T S  GYPEYHRLLPCP +N PPRVEH+VV+EGGPVLEYIC+ L+LPPLFVADLIHFGAV
Sbjct: 77   TPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFGAV 136

Query: 1342 YYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQKTFRITHVNEFVEAG 1163
            YYALVCPKPP +ATPEQ+R+FKEVT PSVL KRSSIKGKTVREAQKTFRITHV++ VEAG
Sbjct: 137  YYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAG 196

Query: 1162 TYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFATRA 983
            TYLRVHVHPKRFPRCY+IDWKSRIIAV ES+VVLDKPAGTSVGGTTDNIEESC TFA+RA
Sbjct: 197  TYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRA 256

Query: 982  LGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXXXXXXXXXXPIGIID 803
            LGLTTPL+TTHQIDNCTEGCVVLART+EYCS+FH KIREK+VKK          P+GI+ 
Sbjct: 257  LGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGIMT 316

Query: 802  HYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYCVMDCGWPSKEFAYE 623
            HYMRPIN+APRLISE+FIKGWYLCQLEV+ECK+VPWP++ V + Y + DCGWPS+++AYE
Sbjct: 317  HYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPSRDYAYE 376

Query: 622  CKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPYGKHKKQYTTENEEL 443
            CKI LLTGRTHQ+RAQLAA GAPIVGDSMYMPAAIA+ +SPGLNP+GK +K+Y +++++ 
Sbjct: 377  CKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEYASDDDKE 436

Query: 442  MAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWR 317
            MAV EWI++HGKEP+VAIGLQA  ISWDDGE  YEARSPWWR
Sbjct: 437  MAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  675 bits (1742), Expect = 0.0
 Identities = 316/408 (77%), Positives = 361/408 (88%)
 Frame = -2

Query: 1540 AIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDLPPLFVADL 1361
            AI    T S  GYPEYHRLLPCP +N PPRVEH+VV+EGGPVLEYIC+ L+LPPLFVADL
Sbjct: 71   AIAAATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADL 130

Query: 1360 IHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQKTFRITHVN 1181
            IHFGAVYYALVCPKPP +ATPEQ+R+FKEVT PSVL KRSSIKGKTVREAQKTFRITHV+
Sbjct: 131  IHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVD 190

Query: 1180 EFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCV 1001
            + VEAGTYLRVHVHPKRFPRCY+IDW SRIIAV ES+VVLDKPAGTSVGGTTDNIEESC 
Sbjct: 191  QIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCA 250

Query: 1000 TFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXXXXXXXXXX 821
            TFA+RALGLTTPL+TTHQIDNCTEGCVVLART+EYCS+FH KIREK+VKK          
Sbjct: 251  TFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAPL 310

Query: 820  PIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYCVMDCGWPS 641
            P+GI+ HYMRPIN+APRL+SE+FI GWYLCQLEV+ECK+VPWP++ V + Y + DCGWPS
Sbjct: 311  PVGIMTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIEDCGWPS 370

Query: 640  KEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPYGKHKKQYT 461
            +++AYECKI LLTGRTHQ+RAQLAA GAPIVGDSMYMPAAIA+ +SPGLNP+GK +K+Y 
Sbjct: 371  RDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKCQKEYA 430

Query: 460  TENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWR 317
            +++++ MAV EWI++HG EP+VAIGLQA  ISWDDGE  YEARSPWWR
Sbjct: 431  SDDDKEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 477

 Score =  675 bits (1741), Expect = 0.0
 Identities = 317/403 (78%), Positives = 356/403 (88%)
 Frame = -2

Query: 1519 SSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDLPPLFVADLIHFGAVY 1340
            SSV GYP Y RLLPCP +NGPPRVEH+VV+EGGPVLEYICK LDLP  FVADLIHFGAVY
Sbjct: 76   SSVYGYP-YTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKLDLPAQFVADLIHFGAVY 134

Query: 1339 YALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQKTFRITHVNEFVEAGT 1160
            YALVCPKPPP+ATPEQ+R++KEVTAPSVLKKR SIKGKTVREAQKTFRITH +++VE GT
Sbjct: 135  YALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHADQYVEDGT 194

Query: 1159 YLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFATRAL 980
            YLRVHVHPKRFPRCY+IDWKSR+IAV E +VVLDKPAGT+VGGTTDNIEESC TF +RAL
Sbjct: 195  YLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESCATFTSRAL 254

Query: 979  GLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXXXXXXXXXXPIGIIDH 800
            GL+TPL TTHQIDNCTEGCVVLARTK+YCSVFHGKIREK+VKK          P+G I H
Sbjct: 255  GLSTPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAPVPLGTITH 314

Query: 799  YMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYCVMDCGWPSKEFAYEC 620
            YMRPIN+APRLISE+ I+ W LCQLEV+ECK+VPWP+S +EE Y V DCGWPSK++AYEC
Sbjct: 315  YMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCGWPSKDYAYEC 374

Query: 619  KINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPYGKHKKQYTTENEELM 440
            KINLLTG+THQIRAQLAA G P+VGDSMYMPAAIAE  +P LNP+GKHKK Y  EN+E +
Sbjct: 375  KINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKKHYAGENDEEI 434

Query: 439  AVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWRLE 311
            AV EW+ARHGKEP VAIGLQA QISWDDGEH++EAR+PWWR +
Sbjct: 435  AVTEWMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWRYQ 477


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  674 bits (1740), Expect = 0.0
 Identities = 311/416 (74%), Positives = 365/416 (87%)
 Frame = -2

Query: 1564 KASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDL 1385
            +A  +  DA     TSS + +P+Y RLLPCP    PPR+EH+V++EGGPVLE ICKALDL
Sbjct: 62   EAEFSTTDAGNLTATSSSDSFPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDL 121

Query: 1384 PPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQK 1205
            PPL+V+DLI FGAVYYALVCP+PPP+AT EQIR+FKEVT PSVL+KR+SIKGKTVREAQK
Sbjct: 122  PPLYVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQK 181

Query: 1204 TFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTT 1025
            TFR+THV++FVE GTYLRVHVHPKRFPR YEIDW+SRIIAVAESYVVLDKPAGTSVGGTT
Sbjct: 182  TFRVTHVDQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTT 241

Query: 1024 DNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXX 845
            DNIEESC TFATRALG+TTPL TTHQIDNCTEGCVVLARTK+YCS+FHGKIREK+VKK  
Sbjct: 242  DNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLY 301

Query: 844  XXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYC 665
                    P GII HYMRPINMAPRLISE+FIKGW+LCQLEVLEC+++PWP +A++++YC
Sbjct: 302  LALAASPLPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYC 361

Query: 664  VMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPY 485
            V DCGWPS+++AYECKINLLTG+THQIRAQ AA+ AP++GDSMYMPAAIA+ ++PGLNP+
Sbjct: 362  VEDCGWPSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPF 421

Query: 484  GKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWR 317
            GK+KK +++E+E+  AV  W+A+HGKEP+VAIGLQA QISWDD EH YEA  PWWR
Sbjct: 422  GKYKKDFSSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 477


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  674 bits (1738), Expect = 0.0
 Identities = 314/416 (75%), Positives = 364/416 (87%)
 Frame = -2

Query: 1564 KASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDL 1385
            +A     DA   N TSS + + +Y RLLPCP    PPR+EH+VV+EGGPVLE+ICKALDL
Sbjct: 62   EAEFLTTDAGILNATSSSDSFRKYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDL 121

Query: 1384 PPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQK 1205
            PPL+V+DLI FGAVYYALVCP+PPP+AT EQIR+FKEVT PSVL+KR+SIKGKTVREAQK
Sbjct: 122  PPLYVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQK 181

Query: 1204 TFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTT 1025
            TFR+THV++FVE GTYLRVHVHPKR PRCYEIDW+SRII VAESYVVLDKPAGTSVGGTT
Sbjct: 182  TFRVTHVDQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTT 241

Query: 1024 DNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXX 845
            DNIEESC TFATRALG+TTPL TTHQIDNCTEGCVVLARTKEYCSVFHGKIREK+VKK  
Sbjct: 242  DNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFY 301

Query: 844  XXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYC 665
                    P GII HYMRPI+MAPRLISE+FIKGW+LCQLEVLEC++VPWP +A++++YC
Sbjct: 302  LALAAFPLPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYC 361

Query: 664  VMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPY 485
            + DCGWPS+++AYECKINLLTG+THQIRAQ AA+ AP++GDSMYMPAAIA  ++PGLNP+
Sbjct: 362  IEDCGWPSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPF 421

Query: 484  GKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWR 317
            GK+KK +++E+E+  AV  WIA+HGKEP+VAIGLQA QISWDD EH YEA SPWWR
Sbjct: 422  GKYKKDFSSESEKETAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 477


>ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
            gi|561020966|gb|ESW19737.1| hypothetical protein
            PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  667 bits (1721), Expect = 0.0
 Identities = 311/420 (74%), Positives = 360/420 (85%)
 Frame = -2

Query: 1576 ARSCKASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICK 1397
            A + ++  +  DA     TSS N  P+Y RLLPCP+   PPRVEH+VV+EGGPVLE+ICK
Sbjct: 58   AIAAESEFSKTDAENLTATSSSNSLPKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICK 117

Query: 1396 ALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVR 1217
            AL+LPPL+V DLI FGAVYYALVCP+PPPSAT EQIR+FKEVT PSVL++R+SIKGKTVR
Sbjct: 118  ALELPPLYVTDLIQFGAVYYALVCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVR 177

Query: 1216 EAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSV 1037
            EAQKTFR+TH ++FVE GTYLRVHVHPKRFPRCYEIDW+SRII+VAESYVVLDKPAGTSV
Sbjct: 178  EAQKTFRVTHADQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSV 237

Query: 1036 GGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRV 857
            GGTTDNIEESC TFATRALGLT PL TTHQIDNCTEGCVVLARTKEYCSVFHGKIREK+V
Sbjct: 238  GGTTDNIEESCATFATRALGLTAPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKV 297

Query: 856  KKXXXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVE 677
            KK          P GII HYMRPINMAPRLISE+FIKGW +CQLE+ EC++VPWP  +++
Sbjct: 298  KKLYLALASSPLPTGIITHYMRPINMAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQ 357

Query: 676  ERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPG 497
            ++YCV DCGWP ++FAYECKINLLTGRTHQIRAQ AA  AP+VGDSMYMPAAI + ++PG
Sbjct: 358  DKYCVEDCGWPYQDFAYECKINLLTGRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPG 417

Query: 496  LNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWR 317
            LNP+GK+K+ +++E+E+  AV  WIA+HGKEP VAIGLQA QISWDD +H YE+ SPWWR
Sbjct: 418  LNPFGKYKRDFSSESEKETAVVNWIAQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWR 477


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  664 bits (1713), Expect = 0.0
 Identities = 312/428 (72%), Positives = 367/428 (85%)
 Frame = -2

Query: 1600 AFLNCNRRARSCKASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGG 1421
            A  +C+R + SC+ S+A +D   T+ T S NG+  Y RL+PCP++N PPRVEH+VVT+ G
Sbjct: 58   ALSSCSR-SFSCQ-STALSDISSTSHTVSSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEG 115

Query: 1420 PVLEYICKALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRS 1241
            PVLEYICKALDLPPL+V DLI FGAVYYALVCPKPPP+A+PEQI++++EVT PS+L++R+
Sbjct: 116  PVLEYICKALDLPPLYVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRT 175

Query: 1240 SIKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVL 1061
            SIKGKTVREAQKTF+IT  +E VEAGTYLRVHVHPKRFPRCY+IDWKSRIIAV + YVVL
Sbjct: 176  SIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVL 235

Query: 1060 DKPAGTSVGGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFH 881
            DKPAGTSVGGTTDNIEESC TFATRALG + PL TTHQIDNCTEGCVVLAR+KEYCSVFH
Sbjct: 236  DKPAGTSVGGTTDNIEESCATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFH 295

Query: 880  GKIREKRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEV 701
            GKIREK+VKK          PIGI+ HYMRPINMAPRL+SE+F+KGW LCQLEVLECK+V
Sbjct: 296  GKIREKKVKKLYLALAAAPVPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKV 355

Query: 700  PWPNSAVEERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAA 521
            PWP+S ++  Y + DCGW  K+FAYEC+INLLTGRTHQIRAQLAA  AP+VGDSMYMPAA
Sbjct: 356  PWPSSEIQRTYNLEDCGWALKDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAA 415

Query: 520  IAETTSPGLNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTY 341
            IAE   PG NP+GK+KK Y+ EN++ +A++EWIA+HGKEP+VA+GLQA QISWDDG+H Y
Sbjct: 416  IAEIVCPGSNPFGKNKKLYSNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCY 475

Query: 340  EARSPWWR 317
             AR PWWR
Sbjct: 476  GARLPWWR 483


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  663 bits (1711), Expect = 0.0
 Identities = 307/393 (78%), Positives = 348/393 (88%)
 Frame = -2

Query: 1495 YHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDLPPLFVADLIHFGAVYYALVCPKP 1316
            Y RLLPCP +N PPRVEH+VV E GPVL+YICKALDLPPLFVADLIHFGAV+YALVCP+P
Sbjct: 3    YDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQP 62

Query: 1315 PPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHP 1136
            PP+ATPEQIR+F+E TAPSVLKKR+SIKGKTVREAQKTFR++ V++F+E GTYLRV+VHP
Sbjct: 63   PPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHP 122

Query: 1135 KRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFATRALGLTTPLKT 956
            +RFPRCYEIDWKSRIIAV ESYVVLDKPAGTSVGGTT+NIEE+C TFATRALGLT PLKT
Sbjct: 123  RRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETCATFATRALGLTIPLKT 182

Query: 955  THQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXXXXXXXXXXPIGIIDHYMRPINMA 776
            THQIDNCTEGCVVLART EYC VFHGKIRE +VKK          P+G+I HYMRP N+ 
Sbjct: 183  THQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGNIP 242

Query: 775  PRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYCVMDCGWPSKEFAYECKINLLTGR 596
            PRL+SEEFI+GWYLCQLEVLEC++VPWP++  EE+Y V DCGWPSK+FAYECKINLLTGR
Sbjct: 243  PRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLTGR 302

Query: 595  THQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPYGKHKKQYTTENEELMAVEEWIAR 416
            THQIRAQLAA GAP+VGDSMYMPAAIAE  +PG+NP+GKHKKQYT EN+E M V EW+ R
Sbjct: 303  THQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVAEWVER 362

Query: 415  HGKEPNVAIGLQASQISWDDGEHTYEARSPWWR 317
            HGKEP++AIGLQA +ISW D +H Y+A  PWWR
Sbjct: 363  HGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
            lycopersicum]
          Length = 448

 Score =  659 bits (1699), Expect = 0.0
 Identities = 305/417 (73%), Positives = 358/417 (85%)
 Frame = -2

Query: 1567 CKASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALD 1388
            C  S+A +D   T+ T S NG+  Y RL+PCP++N PPRVEH+VVT+ GPV+EYICKALD
Sbjct: 32   CCQSTALSDINSTSHTVSSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVVEYICKALD 91

Query: 1387 LPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQ 1208
            LPPL+V DLI FGAVYYALVCPKPPP+A+PEQI++++EVT PSVL+KR+SIKGKTVREAQ
Sbjct: 92   LPPLYVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQ 151

Query: 1207 KTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGT 1028
            KTF+IT  +E VEAGTYLRVHVHPKRFPRCY+IDWKSRIIAV + YVVLDKPAGTSVGGT
Sbjct: 152  KTFKITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGT 211

Query: 1027 TDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKX 848
            TDNIEESC TFATRALG + PL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIREK+V+K 
Sbjct: 212  TDNIEESCATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVRKL 271

Query: 847  XXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERY 668
                     PIGI+ HYMRPINMAPRL+S +F+KGW LCQLEVLEC++VPWP+S ++  Y
Sbjct: 272  YLALAAAPVPIGILTHYMRPINMAPRLVSRDFVKGWLLCQLEVLECQKVPWPSSEIQRTY 331

Query: 667  CVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNP 488
             + DCGW  K++AYEC+INLLTGRTHQIRAQLAA  AP+VGDSMYMPAAIAE   PG NP
Sbjct: 332  NLEDCGWALKDYAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNP 391

Query: 487  YGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWR 317
            +GK+KK Y+ EN++ +A++EWIA+HGKEP+VA+GLQA QISWDDG+H Y AR PWWR
Sbjct: 392  FGKNKKLYSNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARMPWWR 448


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  657 bits (1695), Expect = 0.0
 Identities = 314/432 (72%), Positives = 360/432 (83%), Gaps = 6/432 (1%)
 Frame = -2

Query: 1582 RRARSCKASSAPADAIPTNIT------SSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGG 1421
            RR+   K+S+ P  +  T++T      S+ NGYP+YHRLLPCP  + PPRVEHMVV E G
Sbjct: 44   RRSLGSKSSAFPCKSSITDVTVKTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAG 103

Query: 1420 PVLEYICKALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRS 1241
            PV+EYICK+L+LPPL+VADLIHFGAVYYALVCP+PP +ATPEQIR+FK+ T PS LK R 
Sbjct: 104  PVMEYICKSLNLPPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRK 163

Query: 1240 SIKGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVL 1061
            SIKGKTVREAQKTFRITHV+EFVE GTYLRVHVHPKRFPRCYEIDWKSRIIAV ESYVVL
Sbjct: 164  SIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVL 223

Query: 1060 DKPAGTSVGGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFH 881
            DKPAGTSVGGTTDNIEESC TFATRALGLT+PL TTHQIDNCTEGCV+ ARTKEYCS+FH
Sbjct: 224  DKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFH 283

Query: 880  GKIREKRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEV 701
            GKIREK+V K          P+GII HYMRPIN+APRL+S++ I GW +CQLEVLEC+EV
Sbjct: 284  GKIREKKVMKLYLALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREV 343

Query: 700  PWPNSAVEERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAA 521
             WP++ +E +Y V DCGWPSK+ AYEC+INLLTGRTHQIRAQLA  GAP+VGDSMYMPA 
Sbjct: 344  SWPDADIEAKYRVEDCGWPSKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAV 403

Query: 520  IAETTSPGLNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTY 341
            +AE  SPGLNP+GK KK+YT E ++  AV EW A HGKEP VAIGLQA +ISWD  EH+Y
Sbjct: 404  VAEMGSPGLNPFGKCKKEYTNEEDKETAVAEWSALHGKEPAVAIGLQAYEISWDSREHSY 463

Query: 340  EARSPWWRLEKV 305
             A +PWWR E++
Sbjct: 464  NAGTPWWRQEQL 475


>gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus guttatus]
          Length = 483

 Score =  655 bits (1690), Expect = 0.0
 Identities = 311/428 (72%), Positives = 359/428 (83%), Gaps = 3/428 (0%)
 Frame = -2

Query: 1591 NCNRRARSCKASSAPADAIPTNI-TSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPV 1415
            N   R RSC+++++   +  ++I TS+ N YP Y RLLPCP +NGPPRVEH VVTEGGPV
Sbjct: 56   NAAHRNRSCESTASAYVSTDSSISTSNNNSYPPYGRLLPCPSQNGPPRVEHFVVTEGGPV 115

Query: 1414 LEYICKALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSI 1235
            L+YI K+L++P  FVADLIHFGAV+YALVCP PPP+ATPEQI  FKE T PS+L+KRSSI
Sbjct: 116  LDYISKSLNIPSPFVADLIHFGAVFYALVCPDPPPTATPEQINFFKEYTDPSLLRKRSSI 175

Query: 1234 KGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDK 1055
            KGKT REAQKTFRI+  +EFVE GTYLRVHVHPKRFPRCYE DW+SR+IAVAESYVVLDK
Sbjct: 176  KGKTFREAQKTFRISRTDEFVETGTYLRVHVHPKRFPRCYETDWRSRVIAVAESYVVLDK 235

Query: 1054 PAGTSVGGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGK 875
            PAGTSVGGTTDNIEESCVTF TRALGL  PL TTHQIDNCTEGCVVLARTKEYCSVFHGK
Sbjct: 236  PAGTSVGGTTDNIEESCVTFTTRALGLEAPLITTHQIDNCTEGCVVLARTKEYCSVFHGK 295

Query: 874  IREKRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPW 695
            IREK+VKK           IG+I HYMRP+N+APRL+SE+ + GW+LCQLEVLEC+++PW
Sbjct: 296  IREKKVKKLYLALAAAPVSIGVITHYMRPVNIAPRLVSEDLVNGWHLCQLEVLECRKIPW 355

Query: 694  PNSAVEERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIA 515
            P+S  EE+  V DCGWPSK+FAYECK+NLLTGRTHQIRAQ AA GAP+VGDSMYMPAAIA
Sbjct: 356  PSSIAEEKNRVEDCGWPSKDFAYECKVNLLTGRTHQIRAQFAACGAPLVGDSMYMPAAIA 415

Query: 514  ETTSPGLNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGE--HTY 341
            E   P LNP+GK+KK+Y +++ + +AVEEWIARHGKEP VAIGLQA +ISWD  E  H+Y
Sbjct: 416  EVDRPELNPFGKNKKEYASDDIKAVAVEEWIARHGKEPIVAIGLQACKISWDSDEEQHSY 475

Query: 340  EARSPWWR 317
            EA  PWWR
Sbjct: 476  EAGRPWWR 483


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  651 bits (1680), Expect = 0.0
 Identities = 318/459 (69%), Positives = 366/459 (79%), Gaps = 10/459 (2%)
 Frame = -2

Query: 1651 TAPALXXXXXXXXNATSAFLNCNRRARSC----KASSAPADAIPTNIT------SSVNGY 1502
            T+P+L         + SA  + +  A  C    K+S+ P  +  T++T      S+ NGY
Sbjct: 17   TSPSLLRTLARPRASLSAASSRDYFAPRCSLGSKSSAFPCKSSITDVTVKTATNSAENGY 76

Query: 1501 PEYHRLLPCPIENGPPRVEHMVVTEGGPVLEYICKALDLPPLFVADLIHFGAVYYALVCP 1322
            P+YHRLLPCP  + PPRVEHMVV E GPV+EYICK+L+LPPL+VADLIHFGAVYYALVCP
Sbjct: 77   PQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVCP 136

Query: 1321 KPPPSATPEQIRIFKEVTAPSVLKKRSSIKGKTVREAQKTFRITHVNEFVEAGTYLRVHV 1142
            +PP +ATPEQIR+FK  T PS LK R SIKGKTVREAQKTFRITHV+EFVE GTYLRVHV
Sbjct: 137  QPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVHV 196

Query: 1141 HPKRFPRCYEIDWKSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFATRALGLTTPL 962
            HPKRFPRCYEIDWKSRIIAV ESYVVLDKPAGTSVGGTTDNIEESC TFATRALGLT+PL
Sbjct: 197  HPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPL 256

Query: 961  KTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKRVKKXXXXXXXXXXPIGIIDHYMRPIN 782
             TTHQIDNCTEGCV+ ARTKEYCS+FHGKIREK+V K          P+GII HYMRPIN
Sbjct: 257  WTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPIN 316

Query: 781  MAPRLISEEFIKGWYLCQLEVLECKEVPWPNSAVEERYCVMDCGWPSKEFAYECKINLLT 602
            +APRL+S++ I GW +CQLEVLEC+EV WP++  E +Y V DCGWPSK+ AYEC+INLLT
Sbjct: 317  IAPRLVSKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGWPSKKKAYECRINLLT 376

Query: 601  GRTHQIRAQLAAWGAPIVGDSMYMPAAIAETTSPGLNPYGKHKKQYTTENEELMAVEEWI 422
            GRTHQIRAQLA  GAP+VGDSMYMPA +AE  SPGLNP+GK KK+YT E ++  +V EW 
Sbjct: 377  GRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETSVAEWS 436

Query: 421  ARHGKEPNVAIGLQASQISWDDGEHTYEARSPWWRLEKV 305
            A HGKEP VAIGLQA +ISWD  EH Y A +PWWR E++
Sbjct: 437  ALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 475


>ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cicer arietinum]
          Length = 467

 Score =  645 bits (1664), Expect = 0.0
 Identities = 312/438 (71%), Positives = 359/438 (81%), Gaps = 12/438 (2%)
 Frame = -2

Query: 1594 LNCNRRARSCKASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPV 1415
            LN +    SC+ SS  + A+  +++     YP+Y+RLLPCP    PPR+EH+VV+EGGPV
Sbjct: 35   LNKHAFGWSCR-SSHNSSAVAFSLS-----YPKYNRLLPCPTHKIPPRIEHIVVSEGGPV 88

Query: 1414 LEYICKALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSI 1235
            LEYICKALDLPPLFVADLI FGAVY+ALVCPKPPP+AT E+IR+FK+ T P VL+KR+SI
Sbjct: 89   LEYICKALDLPPLFVADLIKFGAVYFALVCPKPPPTATAEEIRVFKKATEPLVLRKRASI 148

Query: 1234 KGKTVREAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDK 1055
            KGKT+REAQKTF +T V++FVE GTYLRVHVHPKRFPRCYEIDW+SRIIAV ESYV+LDK
Sbjct: 149  KGKTIREAQKTFLVTDVDQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIIAVEESYVILDK 208

Query: 1054 PAGTSVGGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGK 875
            PAGTSVGGTT N EESC  FATRAL LTTPL TTHQIDNCTEGCVVLAR KEYCSVFHGK
Sbjct: 209  PAGTSVGGTTGNTEESCANFATRALELTTPLMTTHQIDNCTEGCVVLARNKEYCSVFHGK 268

Query: 874  IREKRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRLISE------------EFIKGWYLC 731
            IREK+VKK          P GII HYMRPINMAPRLISE             F KGW++C
Sbjct: 269  IREKKVKKIYLALAASPLPTGIIKHYMRPINMAPRLISEGXTTQIGMHSKDYFNKGWHIC 328

Query: 730  QLEVLECKEVPWPNSAVEERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPI 551
            QLEVLEC ++PWP + V+E+YCV DCGWPS+++AYECKINLLTGRTHQIRAQ AA  AP+
Sbjct: 329  QLEVLECIKIPWPTTVVQEKYCVEDCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPL 388

Query: 550  VGDSMYMPAAIAETTSPGLNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQ 371
            +GDSMYMPAAIAE  +PGLNP+GK+KK +T+E+E+  AV  WIA+HGKEP+VAIGLQA Q
Sbjct: 389  IGDSMYMPAAIAEMMNPGLNPFGKYKKDFTSESEKETAVINWIAQHGKEPSVAIGLQACQ 448

Query: 370  ISWDDGEHTYEARSPWWR 317
            ISWDDGEH YEA SPWWR
Sbjct: 449  ISWDDGEHIYEAGSPWWR 466


>ref|XP_004158017.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  642 bits (1655), Expect = 0.0
 Identities = 300/427 (70%), Positives = 356/427 (83%)
 Frame = -2

Query: 1585 NRRARSCKASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEY 1406
            N +A  C++S+   +   T   S+ NGYP+YHRLLPC   N PPRVEH+VV EGGPV+EY
Sbjct: 49   NSKAFPCESSTTDVNVTQTATNSAENGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEY 108

Query: 1405 ICKALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGK 1226
            I K+LDLPP++VADLIHFGAVYYALVCP+PPP+A+ E+IR+FK+ T PS L  R SIKGK
Sbjct: 109  ISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGK 168

Query: 1225 TVREAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAG 1046
            T+REAQKTFRITH++EFVE GTYLRV+VHPKRFPRCYE+DWKSRIIAV +SYVVLDKPAG
Sbjct: 169  TLREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAG 228

Query: 1045 TSVGGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIRE 866
            TSVGGTT+NIEE+CVTFATRALGLT+PL TTHQIDNCTEGCV+LARTKEYCS+FH KIRE
Sbjct: 229  TSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIRE 288

Query: 865  KRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNS 686
            K+V K          P GI+ HYMRP N+APRL+S + I GW LCQLEVLEC+EV WP++
Sbjct: 289  KKVTKLYLALVAVPLPKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDA 348

Query: 685  AVEERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETT 506
             +E +Y + DCGWPSK+ A+ECKINLLTGRTHQIR QLA +GAP+VGDS+YMPAA+AE  
Sbjct: 349  DIEAKYSIEDCGWPSKKKAFECKINLLTGRTHQIRVQLADYGAPLVGDSIYMPAAVAEMA 408

Query: 505  SPGLNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSP 326
            +PGLNP+GK KK+YT+E ++  AV EWIA HGKEP VAIGLQA +ISWD GEH Y A +P
Sbjct: 409  NPGLNPFGKCKKEYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSGEHIYNAGTP 468

Query: 325  WWRLEKV 305
            WWR E++
Sbjct: 469  WWRQEQL 475


>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  639 bits (1649), Expect = 0.0
 Identities = 300/427 (70%), Positives = 355/427 (83%)
 Frame = -2

Query: 1585 NRRARSCKASSAPADAIPTNITSSVNGYPEYHRLLPCPIENGPPRVEHMVVTEGGPVLEY 1406
            N +A  C++S+   +   T   S+ NGYP+YHRLLPC   N PPRVEH+VV EGGPV+EY
Sbjct: 49   NSKAFPCESSTTDVNVTQTATNSAENGYPQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEY 108

Query: 1405 ICKALDLPPLFVADLIHFGAVYYALVCPKPPPSATPEQIRIFKEVTAPSVLKKRSSIKGK 1226
            I K+LDLPP++VADLIHFGAVYYALVCP+PPP+A+ E+IR+FK+ T PS L  R SIKGK
Sbjct: 109  ISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGK 168

Query: 1225 TVREAQKTFRITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAESYVVLDKPAG 1046
            T+REAQKTFRITH++EFVE GTYLRV+VHPKRFPRCYE+DWKSRIIAV +SYVVLDKPAG
Sbjct: 169  TLREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAG 228

Query: 1045 TSVGGTTDNIEESCVTFATRALGLTTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIRE 866
            TSVGGTT+NIEE+CVTFATRALGLT+PL TTHQIDNCTEGCV+LARTKEYCS+FH KIRE
Sbjct: 229  TSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIRE 288

Query: 865  KRVKKXXXXXXXXXXPIGIIDHYMRPINMAPRLISEEFIKGWYLCQLEVLECKEVPWPNS 686
            K+V K          P GI+ HYMRP N+APRL+S + I GW LCQLEVLEC+EV WP++
Sbjct: 289  KKVTKLYLALVAVPLPKGIMTHYMRPNNLAPRLVSRDCIDGWNLCQLEVLECREVSWPDA 348

Query: 685  AVEERYCVMDCGWPSKEFAYECKINLLTGRTHQIRAQLAAWGAPIVGDSMYMPAAIAETT 506
             +E +Y + DCGWPSK+ A+ECKINLLTGRTHQIRAQLA  GAP+VGDSMYMPA +AE  
Sbjct: 349  DIEAKYSIEDCGWPSKKKAFECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMA 408

Query: 505  SPGLNPYGKHKKQYTTENEELMAVEEWIARHGKEPNVAIGLQASQISWDDGEHTYEARSP 326
            +PGLNP+GK KK+YT+E ++  AV EWIA HGKEP VAIGLQA +ISWD  EH+Y A +P
Sbjct: 409  NPGLNPFGKCKKEYTSEEDKENAVAEWIALHGKEPAVAIGLQAYEISWDSREHSYNAGTP 468

Query: 325  WWRLEKV 305
            WWR E++
Sbjct: 469  WWRQEQL 475