BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00022807
         (1279 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...   439   e-120
emb|CBI18893.3| unnamed protein product [Vitis vinifera]              421   e-115
ref|XP_007017950.1| Pseudouridine synthase family protein, putat...   395   e-107
ref|XP_007017949.1| Pseudouridine synthase family protein, putat...   395   e-107
ref|XP_007017948.1| Pseudouridine synthase family protein, putat...   395   e-107
ref|XP_007017947.1| Pseudouridine synthase family protein, putat...   395   e-107
ref|XP_007017946.1| Pseudouridine synthase family protein, putat...   395   e-107
ref|XP_006473742.1| PREDICTED: putative tRNA pseudouridine synth...   365   2e-98
ref|XP_006435287.1| hypothetical protein CICLE_v10000742mg [Citr...   365   2e-98
ref|XP_006435286.1| hypothetical protein CICLE_v10000742mg [Citr...   365   2e-98
ref|XP_007222480.1| hypothetical protein PRUPE_ppa004049mg [Prun...   347   6e-93
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...   347   8e-93
ref|XP_004292924.1| PREDICTED: putative tRNA pseudouridine synth...   326   1e-86
ref|XP_002307763.2| hypothetical protein POPTR_0005s26880g [Popu...   314   5e-83
ref|XP_004238405.1| PREDICTED: putative tRNA pseudouridine synth...   308   3e-81
ref|XP_006342101.1| PREDICTED: putative tRNA pseudouridine synth...   304   6e-80
ref|XP_006838680.1| hypothetical protein AMTR_s00002p00244810 [A...   300   9e-79
emb|CAN83944.1| hypothetical protein VITISV_013561 [Vitis vinifera]   283   9e-74
ref|XP_004499319.1| PREDICTED: putative tRNA pseudouridine synth...   281   3e-73
ref|XP_007160608.1| hypothetical protein PHAVU_001G001600g [Phas...   278   3e-72

>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
            vinifera]
          Length = 578

 Score =  439 bits (1129), Expect = e-120
 Identities = 232/403 (57%), Positives = 279/403 (69%), Gaps = 16/403 (3%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPA------EMQVVEDAVRQLPPHAVKELFSIGVC 169
            M  ETE    +N    V   S+A E         +M+++ DAV ++ PHAVK+L S+G+C
Sbjct: 1    MHHETEDAHASNGHEAVAKVSSAAEDRRMIAGEDDMRILNDAVSKVSPHAVKDLLSLGIC 60

Query: 170  IRCIFRLFGICGHIYSCTSLSPSSLCAVLGELTDLDKHT---VGNGEDLDSLLASKESEL 340
            I CIFRL G+ GHI+SC SL  S L  V+GE TD   H    +G  ED  +  +S+ESE 
Sbjct: 61   IGCIFRLSGVRGHIFSCPSLLLSILHPVIGEPTDSSTHRYTGIGGNEDSGAAHSSQESEC 120

Query: 341  EPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVI 520
            EP+ CSICLG+LQF Y +DK  L+ KDSA+ LA SI  LVK+EG++ DNFSLEVS+PPVI
Sbjct: 121  EPVICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFSLEVSIPPVI 180

Query: 521  LENEHAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSS-FPI 697
             ENEH V LYMK+KYG+E W QEK LS RISAKDALK S+ NPLEKLLDVKS  SS F I
Sbjct: 181  AENEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKLLDVKSSGSSTFRI 240

Query: 698  RLTYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVVPGTECT------MDSSIE 859
            RLTY   + S   QN  ER+Q CKR+R GT+     ++GSVV G EC+       D+ I 
Sbjct: 241  RLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIECSDISTSEADAGIR 300

Query: 860  RYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDE 1039
            +  DGLQD   S+ FKFP EKVN+PC L+ LC+RT IY  GRYLKYSRNVSQ+RWIIDDE
Sbjct: 301  KPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKYSRNVSQTRWIIDDE 360

Query: 1040 RMGEASVEEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            RMGEASVEEI+G  ILPMC GDNYKFHAAG +D+  R    GR
Sbjct: 361  RMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSGR 403


>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  421 bits (1081), Expect = e-115
 Identities = 225/401 (56%), Positives = 272/401 (67%), Gaps = 13/401 (3%)
 Frame = +2

Query: 5    KMPDETEAMQVNNSETKVHNSSTAGEHPA------EMQVVEDAVRQLPPHAVKELFSIGV 166
            +M  ETE    +N    V   S+A E         +M+++ DAV ++ PHAVK+L S+G+
Sbjct: 31   QMHHETEDAHASNGHEAVAKVSSAAEDRRMIAGEDDMRILNDAVSKVSPHAVKDLLSLGI 90

Query: 167  CIRCIFRLFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEP 346
            CI CIFRL G+ GHI+SC SL  S L  V+               D  +  +S+ESE EP
Sbjct: 91   CIGCIFRLSGVRGHIFSCPSLLLSILHPVI---------------DSGAAHSSQESECEP 135

Query: 347  IYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILE 526
            + CSICLG+LQF Y +DK  L+ KDSA+ LA SI  LVK+EG++ DNFSLEVS+PPVI E
Sbjct: 136  VICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFSLEVSIPPVIAE 195

Query: 527  NEHAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSS-FPIRL 703
            NEH V LYMK+KYG+E W QEK LS RISAKDALK S+ NPLEKLLDVKS  SS F IRL
Sbjct: 196  NEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKLLDVKSSGSSTFRIRL 255

Query: 704  TYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVVPGTECT------MDSSIERY 865
            TY   + S   QN  ER+Q CKR+R GT+     ++GSVV G EC+       D+ I + 
Sbjct: 256  TYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIECSDISTSEADAGIRKP 315

Query: 866  FDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERM 1045
             DGLQD   S+ FKFP EKVN+PC L+ LC+RT IY  GRYLKYSRNVSQ+RWIIDDERM
Sbjct: 316  SDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKYSRNVSQTRWIIDDERM 375

Query: 1046 GEASVEEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            GEASVEEI+G  ILPMC GDNYKFHAAG +D+  R    GR
Sbjct: 376  GEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSGR 416


>ref|XP_007017950.1| Pseudouridine synthase family protein, putative isoform 5, partial
            [Theobroma cacao] gi|508723278|gb|EOY15175.1|
            Pseudouridine synthase family protein, putative isoform
            5, partial [Theobroma cacao]
          Length = 422

 Score =  395 bits (1015), Expect = e-107
 Identities = 213/395 (53%), Positives = 274/395 (69%), Gaps = 8/395 (2%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 187
            M ++TE  QV++   + H    AG   AEMQ++E AVR LP H VKEL S+GVC RC+ R
Sbjct: 1    MSNDTEPAQVSSVAAESH----AGACDAEMQLLEGAVRSLPYHVVKELLSVGVCARCVLR 56

Query: 188  LFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 367
            LFGI  HIY  +S S S L ++L E T                  S +SE+E  +CS+CL
Sbjct: 57   LFGIEEHIYCHSSFSQSMLGSILEEET------------------SFKSEVEFQFCSVCL 98

Query: 368  GILQFVYCND-KGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVW 544
            G+LQF YC+D + T++ K+SA  +A SI ELVKQEG+Q+D FSLEVS+PP+ILENE ++ 
Sbjct: 99   GVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLL 158

Query: 545  LYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKT 724
             +MK+KY +E W QE+LLS+  S KD LK++I  PLE LL VK+  SSF IRLTYTH + 
Sbjct: 159  SHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRA 218

Query: 725  SKMVQNFVERNQSCKRKRQGTDGTLDILNG-SVVPGTECTMDSSIER------YFDGLQD 883
            SK VQN VERNQ CKR++ GT+  L  +N  SV+   +C+  S+IE       + +G+QD
Sbjct: 219  SKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGVQD 278

Query: 884  RGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVE 1063
            +  SEHF+ P EKV+EPC L  +C RT IY CGRYLKYSRNVSQ+RWIID+ERMGEASVE
Sbjct: 279  QETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVE 338

Query: 1064 EILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            EI+G+ ILP+C+GDNYKFHAAG +D+  R    GR
Sbjct: 339  EIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGR 373



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLGSGRPFL+EIQNARQVPSE+ VKE+E+KI
Sbjct: 366  VRMLGSGRPFLLEIQNARQVPSELIVKEMESKI 398


>ref|XP_007017949.1| Pseudouridine synthase family protein, putative isoform 4 [Theobroma
            cacao] gi|508723277|gb|EOY15174.1| Pseudouridine synthase
            family protein, putative isoform 4 [Theobroma cacao]
          Length = 469

 Score =  395 bits (1015), Expect = e-107
 Identities = 213/395 (53%), Positives = 274/395 (69%), Gaps = 8/395 (2%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 187
            M ++TE  QV++   + H    AG   AEMQ++E AVR LP H VKEL S+GVC RC+ R
Sbjct: 1    MSNDTEPAQVSSVAAESH----AGACDAEMQLLEGAVRSLPYHVVKELLSVGVCARCVLR 56

Query: 188  LFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 367
            LFGI  HIY  +S S S L ++L E T                  S +SE+E  +CS+CL
Sbjct: 57   LFGIEEHIYCHSSFSQSMLGSILEEET------------------SFKSEVEFQFCSVCL 98

Query: 368  GILQFVYCND-KGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVW 544
            G+LQF YC+D + T++ K+SA  +A SI ELVKQEG+Q+D FSLEVS+PP+ILENE ++ 
Sbjct: 99   GVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLL 158

Query: 545  LYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKT 724
             +MK+KY +E W QE+LLS+  S KD LK++I  PLE LL VK+  SSF IRLTYTH + 
Sbjct: 159  SHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRA 218

Query: 725  SKMVQNFVERNQSCKRKRQGTDGTLDILNG-SVVPGTECTMDSSIER------YFDGLQD 883
            SK VQN VERNQ CKR++ GT+  L  +N  SV+   +C+  S+IE       + +G+QD
Sbjct: 219  SKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGVQD 278

Query: 884  RGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVE 1063
            +  SEHF+ P EKV+EPC L  +C RT IY CGRYLKYSRNVSQ+RWIID+ERMGEASVE
Sbjct: 279  QETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVE 338

Query: 1064 EILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            EI+G+ ILP+C+GDNYKFHAAG +D+  R    GR
Sbjct: 339  EIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGR 373



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLGSGRPFL+EIQNARQVPSE+ VKE+E+KI
Sbjct: 366  VRMLGSGRPFLLEIQNARQVPSELIVKEMESKI 398


>ref|XP_007017948.1| Pseudouridine synthase family protein, putative isoform 3 [Theobroma
            cacao] gi|508723276|gb|EOY15173.1| Pseudouridine synthase
            family protein, putative isoform 3 [Theobroma cacao]
          Length = 449

 Score =  395 bits (1015), Expect = e-107
 Identities = 213/395 (53%), Positives = 274/395 (69%), Gaps = 8/395 (2%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 187
            M ++TE  QV++   + H    AG   AEMQ++E AVR LP H VKEL S+GVC RC+ R
Sbjct: 1    MSNDTEPAQVSSVAAESH----AGACDAEMQLLEGAVRSLPYHVVKELLSVGVCARCVLR 56

Query: 188  LFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 367
            LFGI  HIY  +S S S L ++L E T                  S +SE+E  +CS+CL
Sbjct: 57   LFGIEEHIYCHSSFSQSMLGSILEEET------------------SFKSEVEFQFCSVCL 98

Query: 368  GILQFVYCND-KGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVW 544
            G+LQF YC+D + T++ K+SA  +A SI ELVKQEG+Q+D FSLEVS+PP+ILENE ++ 
Sbjct: 99   GVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLL 158

Query: 545  LYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKT 724
             +MK+KY +E W QE+LLS+  S KD LK++I  PLE LL VK+  SSF IRLTYTH + 
Sbjct: 159  SHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRA 218

Query: 725  SKMVQNFVERNQSCKRKRQGTDGTLDILNG-SVVPGTECTMDSSIER------YFDGLQD 883
            SK VQN VERNQ CKR++ GT+  L  +N  SV+   +C+  S+IE       + +G+QD
Sbjct: 219  SKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGVQD 278

Query: 884  RGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVE 1063
            +  SEHF+ P EKV+EPC L  +C RT IY CGRYLKYSRNVSQ+RWIID+ERMGEASVE
Sbjct: 279  QETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVE 338

Query: 1064 EILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            EI+G+ ILP+C+GDNYKFHAAG +D+  R    GR
Sbjct: 339  EIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGR 373



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLGSGRPFL+EIQNARQVPSE+ VKE+E+KI
Sbjct: 366  VRMLGSGRPFLLEIQNARQVPSELIVKEMESKI 398


>ref|XP_007017947.1| Pseudouridine synthase family protein, putative isoform 2 [Theobroma
            cacao] gi|508723275|gb|EOY15172.1| Pseudouridine synthase
            family protein, putative isoform 2 [Theobroma cacao]
          Length = 476

 Score =  395 bits (1015), Expect = e-107
 Identities = 213/395 (53%), Positives = 274/395 (69%), Gaps = 8/395 (2%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 187
            M ++TE  QV++   + H    AG   AEMQ++E AVR LP H VKEL S+GVC RC+ R
Sbjct: 1    MSNDTEPAQVSSVAAESH----AGACDAEMQLLEGAVRSLPYHVVKELLSVGVCARCVLR 56

Query: 188  LFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 367
            LFGI  HIY  +S S S L ++L E T                  S +SE+E  +CS+CL
Sbjct: 57   LFGIEEHIYCHSSFSQSMLGSILEEET------------------SFKSEVEFQFCSVCL 98

Query: 368  GILQFVYCND-KGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVW 544
            G+LQF YC+D + T++ K+SA  +A SI ELVKQEG+Q+D FSLEVS+PP+ILENE ++ 
Sbjct: 99   GVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLL 158

Query: 545  LYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKT 724
             +MK+KY +E W QE+LLS+  S KD LK++I  PLE LL VK+  SSF IRLTYTH + 
Sbjct: 159  SHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRA 218

Query: 725  SKMVQNFVERNQSCKRKRQGTDGTLDILNG-SVVPGTECTMDSSIER------YFDGLQD 883
            SK VQN VERNQ CKR++ GT+  L  +N  SV+   +C+  S+IE       + +G+QD
Sbjct: 219  SKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGVQD 278

Query: 884  RGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVE 1063
            +  SEHF+ P EKV+EPC L  +C RT IY CGRYLKYSRNVSQ+RWIID+ERMGEASVE
Sbjct: 279  QETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVE 338

Query: 1064 EILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            EI+G+ ILP+C+GDNYKFHAAG +D+  R    GR
Sbjct: 339  EIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGR 373



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLGSGRPFL+EIQNARQVPSE+ VKE+E+KI
Sbjct: 366  VRMLGSGRPFLLEIQNARQVPSELIVKEMESKI 398


>ref|XP_007017946.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao] gi|508723274|gb|EOY15171.1| Pseudouridine synthase
            family protein, putative isoform 1 [Theobroma cacao]
          Length = 548

 Score =  395 bits (1015), Expect = e-107
 Identities = 213/395 (53%), Positives = 274/395 (69%), Gaps = 8/395 (2%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 187
            M ++TE  QV++   + H    AG   AEMQ++E AVR LP H VKEL S+GVC RC+ R
Sbjct: 1    MSNDTEPAQVSSVAAESH----AGACDAEMQLLEGAVRSLPYHVVKELLSVGVCARCVLR 56

Query: 188  LFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 367
            LFGI  HIY  +S S S L ++L E T                  S +SE+E  +CS+CL
Sbjct: 57   LFGIEEHIYCHSSFSQSMLGSILEEET------------------SFKSEVEFQFCSVCL 98

Query: 368  GILQFVYCND-KGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVW 544
            G+LQF YC+D + T++ K+SA  +A SI ELVKQEG+Q+D FSLEVS+PP+ILENE ++ 
Sbjct: 99   GVLQFSYCDDGEETVVKKESAKDMALSIAELVKQEGHQIDGFSLEVSVPPLILENESSLL 158

Query: 545  LYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKT 724
             +MK+KY +E W QE+LLS+  S KD LK++I  PLE LL VK+  SSF IRLTYTH + 
Sbjct: 159  SHMKKKYESEPWFQERLLSKCHSVKDVLKFAITKPLETLLGVKASASSFRIRLTYTHKRA 218

Query: 725  SKMVQNFVERNQSCKRKRQGTDGTLDILNG-SVVPGTECTMDSSIER------YFDGLQD 883
            SK VQN VERNQ CKR++ GT+  L  +N  SV+   +C+  S+IE       + +G+QD
Sbjct: 219  SKKVQNSVERNQECKRRKTGTENALHNVNDESVIADKDCSGYSTIETNSVTGIFSNGVQD 278

Query: 884  RGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVE 1063
            +  SEHF+ P EKV+EPC L  +C RT IY CGRYLKYSRNVSQ+RWIID+ERMGEASVE
Sbjct: 279  QETSEHFESPIEKVSEPCHLVYVCCRTHIYLCGRYLKYSRNVSQTRWIIDEERMGEASVE 338

Query: 1064 EILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            EI+G+ ILP+C+GDNYKFHAAG +D+  R    GR
Sbjct: 339  EIIGSNILPICQGDNYKFHAAGREDIDVRMLGSGR 373



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLGSGRPFL+EIQNARQVPSE+ VKE+E+KI
Sbjct: 366  VRMLGSGRPFLLEIQNARQVPSELIVKEMESKI 398


>ref|XP_006473742.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like isoform X1
            [Citrus sinensis]
          Length = 561

 Score =  365 bits (938), Expect = 2e-98
 Identities = 199/399 (49%), Positives = 263/399 (65%), Gaps = 12/399 (3%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEM----QVVEDAVRQLPPHAVKELFSIGVCIR 175
            M +ETE    N++      S+    +P +     +++ DAV+ LP  AVK+L S  VC+R
Sbjct: 1    MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLR 60

Query: 176  CIFRLFGICGHIYSCTSLSPSSL-CAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIY 352
            CIFRLFG+   +  C+SLS  SL C VLGE  DL ++                S +EP  
Sbjct: 61   CIFRLFGM--QVPICSSLSVKSLLCHVLGEQADLHQNI---------------SSVEPNI 103

Query: 353  CSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENE 532
            C  CLGILQF YC DK  ++  +SA   A +I ELVK+EG+Q+D+FSLEVS+PP ILENE
Sbjct: 104  CRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENE 163

Query: 533  HAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYT 712
            + + LY+KRKY +E W +++ +S   S KDALK+++ NPLE LLDVK  +S+F IRLTY+
Sbjct: 164  NKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS 223

Query: 713  HTKTSKMVQNFVERNQSCKRKRQGTDGTLD-ILNGSVVPGTECTMDSSI------ERYFD 871
              + S  +QNFVE+ + CKR++      LD + + S + G E ++ S+       E+  +
Sbjct: 224  RVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSN 283

Query: 872  GLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGE 1051
            GLQD  PSE  +FP +KVNEPCRL  LC RTPIYF GRYLKYSRNVSQ+RWIID+ERMGE
Sbjct: 284  GLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE 343

Query: 1052 ASVEEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            AS+EEI+G  ILPMCRGD+YKFHAAG +D+  R    GR
Sbjct: 344  ASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGR 382



 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLGSGRPFL EIQNAR+VPSE+ VKEIE+KI
Sbjct: 375  VRMLGSGRPFLFEIQNAREVPSELLVKEIESKI 407


>ref|XP_006435287.1| hypothetical protein CICLE_v10000742mg [Citrus clementina]
            gi|568839548|ref|XP_006473743.1| PREDICTED: putative tRNA
            pseudouridine synthase Pus10-like isoform X2 [Citrus
            sinensis] gi|557537409|gb|ESR48527.1| hypothetical
            protein CICLE_v10000742mg [Citrus clementina]
          Length = 557

 Score =  365 bits (938), Expect = 2e-98
 Identities = 199/399 (49%), Positives = 263/399 (65%), Gaps = 12/399 (3%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEM----QVVEDAVRQLPPHAVKELFSIGVCIR 175
            M +ETE    N++      S+    +P +     +++ DAV+ LP  AVK+L S  VC+R
Sbjct: 1    MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLR 60

Query: 176  CIFRLFGICGHIYSCTSLSPSSL-CAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIY 352
            CIFRLFG+   +  C+SLS  SL C VLGE  DL ++                S +EP  
Sbjct: 61   CIFRLFGM--QVPICSSLSVKSLLCHVLGEQADLHQNI---------------SSVEPNI 103

Query: 353  CSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENE 532
            C  CLGILQF YC DK  ++  +SA   A +I ELVK+EG+Q+D+FSLEVS+PP ILENE
Sbjct: 104  CRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENE 163

Query: 533  HAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYT 712
            + + LY+KRKY +E W +++ +S   S KDALK+++ NPLE LLDVK  +S+F IRLTY+
Sbjct: 164  NKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS 223

Query: 713  HTKTSKMVQNFVERNQSCKRKRQGTDGTLD-ILNGSVVPGTECTMDSSI------ERYFD 871
              + S  +QNFVE+ + CKR++      LD + + S + G E ++ S+       E+  +
Sbjct: 224  RVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSN 283

Query: 872  GLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGE 1051
            GLQD  PSE  +FP +KVNEPCRL  LC RTPIYF GRYLKYSRNVSQ+RWIID+ERMGE
Sbjct: 284  GLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE 343

Query: 1052 ASVEEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            AS+EEI+G  ILPMCRGD+YKFHAAG +D+  R    GR
Sbjct: 344  ASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGR 382



 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLGSGRPFL EIQNAR+VPSE+ VKEIE+KI
Sbjct: 375  VRMLGSGRPFLFEIQNAREVPSELLVKEIESKI 407


>ref|XP_006435286.1| hypothetical protein CICLE_v10000742mg [Citrus clementina]
            gi|557537408|gb|ESR48526.1| hypothetical protein
            CICLE_v10000742mg [Citrus clementina]
          Length = 489

 Score =  365 bits (938), Expect = 2e-98
 Identities = 199/399 (49%), Positives = 263/399 (65%), Gaps = 12/399 (3%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEM----QVVEDAVRQLPPHAVKELFSIGVCIR 175
            M +ETE    N++      S+    +P +     +++ DAV+ LP  AVK+L S  VC+R
Sbjct: 1    MANETEDAPTNSASESHATSADVERNPTDEDKNEKLLNDAVQFLPTDAVKDLLSKEVCLR 60

Query: 176  CIFRLFGICGHIYSCTSLSPSSL-CAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIY 352
            CIFRLFG+   +  C+SLS  SL C VLGE  DL ++                S +EP  
Sbjct: 61   CIFRLFGM--QVPICSSLSVKSLLCHVLGEQADLHQNI---------------SSVEPNI 103

Query: 353  CSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENE 532
            C  CLGILQF YC DK  ++  +SA   A +I ELVK+EG+Q+D+FSLEVS+PP ILENE
Sbjct: 104  CRSCLGILQFTYCGDKERVVENESACDFAVAIAELVKKEGHQIDSFSLEVSMPPTILENE 163

Query: 533  HAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYT 712
            + + LY+KRKY +E W +++ +S   S KDALK+++ NPLE LLDVK  +S+F IRLTY+
Sbjct: 164  NKLSLYVKRKYRSEAWFKDRSISECSSTKDALKFALTNPLETLLDVKCGISTFHIRLTYS 223

Query: 713  HTKTSKMVQNFVERNQSCKRKRQGTDGTLD-ILNGSVVPGTECTMDSSI------ERYFD 871
              + S  +QNFVE+ + CKR++      LD + + S + G E ++ S+       E+  +
Sbjct: 224  RVEASIRIQNFVEKIEGCKRRKVDAKNCLDTVKDKSAITGVENSVVSTTEVIPVDEKSSN 283

Query: 872  GLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGE 1051
            GLQD  PSE  +FP +KVNEPCRL  LC RTPIYF GRYLKYSRNVSQ+RWIID+ERMGE
Sbjct: 284  GLQDNEPSETHEFPLKKVNEPCRLECLCFRTPIYFGGRYLKYSRNVSQTRWIIDEERMGE 343

Query: 1052 ASVEEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            AS+EEI+G  ILPMCRGD+YKFHAAG +D+  R    GR
Sbjct: 344  ASIEEIIGGNILPMCRGDSYKFHAAGREDIDVRMLGSGR 382



 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLGSGRPFL EIQNAR+VPSE+ VKEIE+KI
Sbjct: 375  VRMLGSGRPFLFEIQNAREVPSELLVKEIESKI 407


>ref|XP_007222480.1| hypothetical protein PRUPE_ppa004049mg [Prunus persica]
            gi|462419416|gb|EMJ23679.1| hypothetical protein
            PRUPE_ppa004049mg [Prunus persica]
          Length = 533

 Score =  347 bits (890), Expect = 6e-93
 Identities = 192/355 (54%), Positives = 235/355 (66%), Gaps = 2/355 (0%)
 Frame = +2

Query: 110  DAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTV 289
            D VR+LP  AV +L SIGVC RCI RLFGI  H+Y  +SLSPS L +VLG+ T  +KH V
Sbjct: 23   DVVRELPIRAVIDLLSIGVCTRCILRLFGIREHVYYRSSLSPSMLSSVLGDSTCSEKHMV 82

Query: 290  -GNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQ 466
             GN  +L             + CSICLGILQF Y  DK  +  K+SAN LA SI  L++Q
Sbjct: 83   DGNFREL-------------VVCSICLGILQFTYWEDKKLVTEKESANELAVSISSLIRQ 129

Query: 467  EGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYSIVN 646
            +G+++D+FSLEVS+PP++LEN+H VWLYMKRKY +E W Q K +S  ISAKDALK S++ 
Sbjct: 130  QGFEIDSFSLEVSIPPIVLENDHTVWLYMKRKYESELWFQGKSISECISAKDALKISLME 189

Query: 647  PLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGSV-V 823
             LE +L  KS MS+F IRLTYTH  +SK V+N VE    C     G    L+ ++  +  
Sbjct: 190  SLETMLGCKSNMSAFRIRLTYTHRISSKTVENSVE---GC---HGGAGNGLNTIDDDIKC 243

Query: 824  PGTECTMDSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSR 1003
             G      + +E  F  LQ    SE  K P  + NEPC L  LC+RT IY  GRYLKYSR
Sbjct: 244  SGPPIEAGAVVEGSFVSLQANELSECLKLPLGQSNEPCCLEFLCYRTQIYVGGRYLKYSR 303

Query: 1004 NVSQSRWIIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            NVSQ+ WIIDDERMGEASVEEILG+ ILP+CRGDNYKFHAAG +D+  R    GR
Sbjct: 304  NVSQTCWIIDDERMGEASVEEILGSNILPLCRGDNYKFHAAGREDIDVRMLGSGR 358


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
            gi|223551325|gb|EEF52811.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 565

 Score =  347 bits (889), Expect = 8e-93
 Identities = 184/366 (50%), Positives = 241/366 (65%), Gaps = 7/366 (1%)
 Frame = +2

Query: 92   EMQVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCAVLGELTD 271
            +M++  +AVR LP HAVK L   G+C+RCIFRL G+ GHI+    LS S +  +LGE   
Sbjct: 34   DMRLFNEAVRSLPSHAVKGLLRNGICMRCIFRLLGVQGHIFFTYPLSRSLMHNILGESWK 93

Query: 272  LDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIV 451
             D       ED+       ES ++   C++CLGILQF++ +DKG L+ K +A  L  SI 
Sbjct: 94   DD-------EDMKGCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVNLCVSIA 146

Query: 452  ELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWLQEKLLSRRISAKDALK 631
            EL+KQEG+Q+D+FSLEVS+ P+I ENE  + LYM+RKY +E W QE + S+ I  K+ALK
Sbjct: 147  ELIKQEGHQIDSFSLEVSIAPIIQENERVIRLYMERKYRSELWFQESV-SKCICTKEALK 205

Query: 632  YSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILN 811
            ++I NPLE++LDVKS  SS  IRLTYT  K S +  N V   + CKR++ G     + +N
Sbjct: 206  FAIANPLERMLDVKSGPSSCRIRLTYTQAKPSGIAPNSVPGGEGCKRRKTGITDAPESVN 265

Query: 812  GSVVPGTECTMDSSI-------ERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPI 970
              ++       DSS+       E  F GL++   SE   FP EKV EPC L  LC+RTPI
Sbjct: 266  NELINARNGCFDSSMYKGIDSSESSFCGLENHESSECI-FPKEKVKEPCNLLFLCYRTPI 324

Query: 971  YFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGSKDVGFR 1150
            YF GRYLK+SRNVSQ+RWIIDDERMGEAS+EEI+G +I PMC+GD+YKFHAAG +D+  R
Sbjct: 325  YFGGRYLKFSRNVSQTRWIIDDERMGEASIEEIIGGSIFPMCQGDSYKFHAAGREDIDVR 384

Query: 1151 SAFLGR 1168
                GR
Sbjct: 385  MLGSGR 390


>ref|XP_004292924.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Fragaria
            vesca subsp. vesca]
          Length = 528

 Score =  326 bits (836), Expect = 1e-86
 Identities = 181/373 (48%), Positives = 240/373 (64%)
 Frame = +2

Query: 50   TKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSL 229
            T++  +S A  +  +++ + DAVR LP HAV ELFSIGVC RCI RLFG+ G ++  + L
Sbjct: 3    TEIEAASPATVNGDDVRALYDAVRALPSHAVIELFSIGVCTRCILRLFGVSGSVHYHSPL 62

Query: 230  SPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTL 409
            S S L +V  + TDLD               ++ S  EP+ C +CLGILQF Y  DK  +
Sbjct: 63   SQSMLSSVFSDSTDLD---------------NRSSLREPVVCRLCLGILQFTYSEDK-KV 106

Query: 410  INKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWLQE 589
            + K+S  GLAA I  L++++G+++D+FSLEVS+PPV+LENE  VW ++K K+ +E  LQE
Sbjct: 107  VKKESVEGLAAYICNLIREQGFEIDSFSLEVSIPPVVLENERIVWDHLKTKFESELQLQE 166

Query: 590  KLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCK 769
            + L   IS KDALK S+   LE +LD +S   +F IRLTYT+  +S+ V+N V+     K
Sbjct: 167  RSLPECISVKDALKVSLTETLETMLDCRSSTGTFRIRLTYTYPVSSETVENSVDGCHGSK 226

Query: 770  RKRQGTDGTLDILNGSVVPGTECTMDSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSI 949
            R++ GT     I   S    T+C+  S+ E   + +Q        KF  E+ NEPC L  
Sbjct: 227  RRKTGTQ----IHFASSDDETKCSGFSASEP--ESMQAIKSLNCPKFRMEQTNEPCCLEF 280

Query: 950  LCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTILPMCRGDNYKFHAAG 1129
            LC+RT IYF GRYLKYSRNVSQS WIIDDERMGEASVEEI+G+ ILP+CRGD YKFHAAG
Sbjct: 281  LCYRTQIYFGGRYLKYSRNVSQSCWIIDDERMGEASVEEIIGSNILPICRGDKYKFHAAG 340

Query: 1130 SKDVGFRSAFLGR 1168
             +D+  R    GR
Sbjct: 341  REDIDVRMLGSGR 353


>ref|XP_002307763.2| hypothetical protein POPTR_0005s26880g [Populus trichocarpa]
            gi|550339817|gb|EEE94759.2| hypothetical protein
            POPTR_0005s26880g [Populus trichocarpa]
          Length = 520

 Score =  314 bits (805), Expect = 5e-83
 Identities = 191/400 (47%), Positives = 237/400 (59%), Gaps = 13/400 (3%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPA-----EMQVVEDAVRQLPPHAVKELFSIGVCI 172
            M  ETEA Q +N    V   S   +H       E + + DAVR LP HAVK+L S G   
Sbjct: 1    MSSETEAAQFSNGTDAVQVISPNDDHRVTPGDDERRHLNDAVRSLPSHAVKDLLSAG--- 57

Query: 173  RCIFRLFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIY 352
                                                   G+    +S+    ESEL+P  
Sbjct: 58   ---------------------------------------GDSSSSESM----ESELKPEV 74

Query: 353  CSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENE 532
            C ICLGILQF+Y ++K  L+ + + + LAASI EL++QEG+Q+D FSLEVS+PP+I ENE
Sbjct: 75   CRICLGILQFIYRDEKEMLVKRKNGDELAASIAELIRQEGHQIDGFSLEVSIPPIIFENE 134

Query: 533  HAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYT 712
             AV LYMK+KYG+E W QE+L S  IS KDALK++IVNPLE +LDVKS  S   IRLTYT
Sbjct: 135  QAVRLYMKKKYGSELWFQERL-SECISTKDALKFAIVNPLEIILDVKSGPSYVRIRLTYT 193

Query: 713  HTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVVP-GTECTMDSSIE-------RYF 868
             TK S +    V+RN        GT+  LD ++  +V  GT C  D S+        R  
Sbjct: 194  ETKPSIIPSKSVDRNG-------GTNNGLDTVHVELVGNGTGCC-DLSLGQGSPASGRSS 245

Query: 869  DGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMG 1048
             GL +   SE   FP E+VNEPC L  LC+RTPIYF GRYLK+SRNVSQ+RWIIDDERMG
Sbjct: 246  TGLAEHESSECSNFPLERVNEPCHLVFLCYRTPIYFGGRYLKFSRNVSQTRWIIDDERMG 305

Query: 1049 EASVEEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            EAS+EEI+G  ILPMC+GD+YKFHAAG +D+  R    GR
Sbjct: 306  EASIEEIIGGNILPMCQGDSYKFHAAGREDIDVRMLGSGR 345


>ref|XP_004238405.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Solanum
            lycopersicum]
          Length = 557

 Score =  308 bits (789), Expect = 3e-81
 Identities = 178/376 (47%), Positives = 234/376 (62%), Gaps = 7/376 (1%)
 Frame = +2

Query: 62   NSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSS 241
            +S+ A     +++++ +AV  LP  AVK+L+SIG C+RCIFRLFG+   + S  SLS S 
Sbjct: 17   SSAEAAAEEEKLRLLREAVHALPVSAVKDLWSIGACVRCIFRLFGLHELMCSHPSLSISK 76

Query: 242  LCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKD 421
             C +L ++       + N +   +  + +E   E  +C ICLGILQF+Y +D GTL+ K 
Sbjct: 77   WCDILEDV-------MRNKDGEFNEQSHQERSRETNFCKICLGILQFLYYDDTGTLLKKY 129

Query: 422  SANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWLQEKLLS 601
            SA+  A  I ELVKQ+  Q+D+FSLEVSLP V+ EN+ AVWLYMK KY  E W QEK   
Sbjct: 130  SADDFAVVISELVKQQYQQIDSFSLEVSLPSVVTENDQAVWLYMKNKYRHELWFQEKAEC 189

Query: 602  RRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQ 781
            + IS KD  K  ++NPL++LL VKS  SSF +RLTY+H+       +  E N   KR++ 
Sbjct: 190  QFISTKDIFKLLVINPLQRLLGVKSTQSSFRVRLTYSHSDALTR-DDVQEGNGGNKRRKT 248

Query: 782  GTDGTLDILNGSVVPGTECTMDSSIERYFDGLQDRGPSE-------HFKFPPEKVNEPCR 940
            G  G L     SV P  E + DS+I    DGL    P E       +     +KV +PC 
Sbjct: 249  GFTGDLKTTGESVTPHVE-SFDSNIVD-GDGLTKVCPKEAQDLSCNNLMAKLDKVGKPCS 306

Query: 941  LSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTILPMCRGDNYKFH 1120
            L+I C R+  Y  GRYLKYSRNVSQ+RW+IDDERMGEASVEEI+G  ILP+ +GDNYKFH
Sbjct: 307  LAIHCCRSSTYIGGRYLKYSRNVSQTRWVIDDERMGEASVEEIIGGAILPIFQGDNYKFH 366

Query: 1121 AAGSKDVGFRSAFLGR 1168
            AAG +D+  R    GR
Sbjct: 367  AAGREDIDVRMLGTGR 382



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLG+GRPFLVEIQNARQVPSE  +KEIE KI
Sbjct: 375  VRMLGTGRPFLVEIQNARQVPSEALIKEIEKKI 407


>ref|XP_006342101.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Solanum
            tuberosum]
          Length = 560

 Score =  304 bits (778), Expect = 6e-80
 Identities = 181/396 (45%), Positives = 240/396 (60%), Gaps = 9/396 (2%)
 Frame = +2

Query: 8    MPDETEAMQVNNSETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFR 187
            M  E  A +V     K  +S+ A     +++++ +AV  LP +AVK+L+SIG C+RCIFR
Sbjct: 1    MAGEVAAAEVTG--VKHLSSAEAAAEEEKLRLLREAVHALPVNAVKDLWSIGACVRCIFR 58

Query: 188  LFGICGHIYSCTSLSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICL 367
            LFG+   + S  SLS S  C +L    D+ +   G   +      S+E+     +C ICL
Sbjct: 59   LFGLHELMCSHPSLSISKWCDIL---EDVMRKKDGEFNEQSHQERSRETN----FCKICL 111

Query: 368  GILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWL 547
            GILQF+Y +D GTL+ K SA+  A  I ELVKQ+  Q+D+FSLEVSLP  + EN+ AVWL
Sbjct: 112  GILQFLYYDDTGTLLKKYSADDFAVVISELVKQQYQQIDSFSLEVSLPSSVTENDQAVWL 171

Query: 548  YMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTK-- 721
            YMK K+  E W QEK   + IS KD LK  ++NPL++LL VKS  SSF +RLTY+H+   
Sbjct: 172  YMKNKFRHELWFQEKAECQFISTKDILKLLVINPLQRLLGVKSSQSSFRVRLTYSHSDAL 231

Query: 722  TSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVVPGTECTMDSSIERYFDGLQDRGPSE- 898
            T   VQ+    N+  K  + G  G L     SV P  E + +  ++   DGL    P E 
Sbjct: 232  TRDDVQDGNGGNKRRKTDKAGFTGDLKTTGESVTPHVESSDNHIVDG--DGLTKVCPKES 289

Query: 899  ------HFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASV 1060
                  +     +KV +PC L+I C R+  Y  GRYLKYSRNVSQ+RW+IDDERMGEASV
Sbjct: 290  QDLSCNNLMAQLDKVGKPCCLTIHCCRSSTYIGGRYLKYSRNVSQTRWVIDDERMGEASV 349

Query: 1061 EEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            EEI+G  ILP+ +GDNYKFHAAG +D+  R    GR
Sbjct: 350  EEIIGGAILPIFQGDNYKFHAAGREDIDVRMLGTGR 385



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +3

Query: 1131 VRMLGSGRPFLVEIQNARQVPSEVFVKEIEAKI 1229
            VRMLG+GRPFLVEIQNARQVPSE  +KEIE KI
Sbjct: 378  VRMLGTGRPFLVEIQNARQVPSEALIKEIERKI 410


>ref|XP_006838680.1| hypothetical protein AMTR_s00002p00244810 [Amborella trichopoda]
            gi|548841186|gb|ERN01249.1| hypothetical protein
            AMTR_s00002p00244810 [Amborella trichopoda]
          Length = 526

 Score =  300 bits (768), Expect = 9e-79
 Identities = 167/368 (45%), Positives = 228/368 (61%), Gaps = 9/368 (2%)
 Frame = +2

Query: 92   EMQVVEDAVRQ--LPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCAVLG-- 259
            E Q+VE+++RQ  LP HA+++L SIGVC RCIFRLFG+ G +YSC SLS S L +VL   
Sbjct: 8    EKQLVEESIRQSGLPCHALRDLLSIGVCPRCIFRLFGVHGDVYSCLSLSSSLLWSVLDLS 67

Query: 260  ----ELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSA 427
                E TD   H        +   + ++ ++ P +C +C GILQ  Y        +    
Sbjct: 68   NGHEEATDCKVH--------EGSSSPQDLKVGPEFCVVCWGILQLSYDEQAQQTFD---- 115

Query: 428  NGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWLQEKLLSRR 607
              L AS  +LVK EG+++D+FSLEVS+PP+IL NE +VWLYMK++YG+E   Q+K  S  
Sbjct: 116  --LVASTAQLVKGEGFEIDSFSLEVSVPPIILGNERSVWLYMKKRYGSESRFQDKFFSGS 173

Query: 608  ISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFV-ERNQSCKRKRQG 784
            IS KDAL++SI   LE++L VK  + SF IR TYTH+  S  +      R    K++++G
Sbjct: 174  ISVKDALRFSITKSLEEMLAVKVAVRSFHIRFTYTHSDASSKISLVQGSRTDGHKKQKRG 233

Query: 785  TDGTLDILNGSVVPGTECTMDSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRT 964
                L+ ++ S         D  I +   GL        F+ PP KVN+PC+++ LC+RT
Sbjct: 234  DKELLEGIDAS---------DLEINKESFGLDIAEQDRIFQVPPAKVNQPCKVTTLCYRT 284

Query: 965  PIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGSKDVG 1144
            P+Y  GRYLKYSRNVSQ+RWIID+ERMGE SVEEI+GN  L + + D+YKFHAAG +D+ 
Sbjct: 285  PVYVGGRYLKYSRNVSQTRWIIDEERMGETSVEEIIGNLTLSILKADSYKFHAAGREDID 344

Query: 1145 FRSAFLGR 1168
             R    GR
Sbjct: 345  VRMLGSGR 352


>emb|CAN83944.1| hypothetical protein VITISV_013561 [Vitis vinifera]
          Length = 872

 Score =  283 bits (725), Expect = 9e-74
 Identities = 151/270 (55%), Positives = 185/270 (68%), Gaps = 10/270 (3%)
 Frame = +2

Query: 143  KELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCAVLGELTDLDKHT---VGNGEDLDS 313
            +++  + +CI CIFRL G+ GHI+SC SL  S L  V+GE TD   H    +G  ED  +
Sbjct: 519  EDILGLQICIGCIFRLSGVRGHIFSCPSLLLSILHXVIGEPTDSSTHRYTGIGGNEDSGA 578

Query: 314  LLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVELVKQEGYQLDNFS 493
              +S+ESE EP+ CSICLG+LQF Y +DK  L+ KDSA+ LA SI  LVK+EG++ DNFS
Sbjct: 579  AHSSQESECEPVICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFS 638

Query: 494  LEVSLPPVILENEHAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYSIVNPLEKLLDVK 673
            LEVS+PPVI ENEH V LYMK+KYG+E W QEK LS RISAKDALK S+ NPLEKLLDVK
Sbjct: 639  LEVSIPPVIAENEHVVLLYMKKKYGSELWFQEKFLSERISAKDALKLSLCNPLEKLLDVK 698

Query: 674  SCMSS-FPIRLTYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGSVVPGTECT--- 841
            S  SS F IRLTY   + S   QN  ER+Q CKR+R GT+     ++GSVV G EC+   
Sbjct: 699  SSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIECSDIS 758

Query: 842  ---MDSSIERYFDGLQDRGPSEHFKFPPEK 922
                D+ I +  DGLQD   S+ FKFP EK
Sbjct: 759  TSEADAGIRKPSDGLQDNENSDCFKFPLEK 788


>ref|XP_004499319.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like isoform X1
            [Cicer arietinum] gi|502126472|ref|XP_004499320.1|
            PREDICTED: putative tRNA pseudouridine synthase
            Pus10-like isoform X2 [Cicer arietinum]
          Length = 508

 Score =  281 bits (720), Expect = 3e-73
 Identities = 159/357 (44%), Positives = 213/357 (59%)
 Frame = +2

Query: 98   QVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTSLSPSSLCAVLGELTDLD 277
            + +E+ V+ LP  AV  L S+G+C+RCIFR+FGI G +Y+  SLSPS   + + +L    
Sbjct: 22   KTLEEVVQALPSDAVNHLVSLGICVRCIFRVFGIEGRVYASPSLSPSVFASAVEQLPP-- 79

Query: 278  KHTVGNGEDLDSLLASKESELEPIYCSICLGILQFVYCNDKGTLINKDSANGLAASIVEL 457
              T  N  +   L            C++CLGILQF + +  GT++  D    L   I ++
Sbjct: 80   --TEDNNNNKHQL------------CTLCLGILQFTFRDHDGTILRNDD---LPLLISDM 122

Query: 458  VKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWLQEKLLSRRISAKDALKYS 637
            VK++GY  D FSLEVS+PP+IL N++++  YMK KYG++ W QE    R IS KDALK+S
Sbjct: 123  VKRDGYHSDTFSLEVSIPPIILHNDNSLRSYMKIKYGSQPWFQE----RCISTKDALKFS 178

Query: 638  IVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQSCKRKRQGTDGTLDILNGS 817
            + +PL+ LL+ KS M SF IRLTYT    SK     ++  +SCKR++ G           
Sbjct: 179  LQHPLQNLLECKSTMGSFRIRLTYT---ASKDADKCLDNAESCKRRKTG----------- 224

Query: 818  VVPGTECTMDSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRLSILCHRTPIYFCGRYLKY 997
                 EC +D           +   S+  KF  E  NEPC  +  C+RTP YF GRYLKY
Sbjct: 225  -----ECNLDGQKPSSIS--LENESSDCCKFMLEMPNEPCHFAYSCYRTPFYFGGRYLKY 277

Query: 998  SRNVSQSRWIIDDERMGEASVEEILGNTILPMCRGDNYKFHAAGSKDVGFRSAFLGR 1168
            SRNVSQ+RWIIDDERMGEASVEEI+G  IL  C+ D++KFHAAG +D+  R    GR
Sbjct: 278  SRNVSQTRWIIDDERMGEASVEEIIGGNILQACQADSFKFHAAGREDIDVRMLGPGR 334


>ref|XP_007160608.1| hypothetical protein PHAVU_001G001600g [Phaseolus vulgaris]
            gi|561034072|gb|ESW32602.1| hypothetical protein
            PHAVU_001G001600g [Phaseolus vulgaris]
          Length = 503

 Score =  278 bits (712), Expect = 3e-72
 Identities = 168/375 (44%), Positives = 217/375 (57%), Gaps = 1/375 (0%)
 Frame = +2

Query: 47   ETKVHNSSTAGEHPAEMQVVEDAVRQLPPHAVKELFSIGVCIRCIFRLFGICGHIYSCTS 226
            ET    S    EH  E +   ++V+ LP  AVKEL S GVC RCIFRLFG+ G +Y+   
Sbjct: 8    ETVKRLSGEEEEHKLESE--SESVQALPSDAVKELLSEGVCARCIFRLFGLHGRVYA--- 62

Query: 227  LSPSSLCAVLGELTDLDKHTVGNGEDLDSLLASKESELEPIYCSICLGILQFV-YCNDKG 403
             SP SL                      S L+    +L    C++C GILQF  Y +D  
Sbjct: 63   -SPPSL----------------------SSLSPTTHQL----CTLCFGILQFTCYSDDTQ 95

Query: 404  TLINKDSANGLAASIVELVKQEGYQLDNFSLEVSLPPVILENEHAVWLYMKRKYGAECWL 583
            TL+     + L   I + VK+  YQ + FSLEVS+PP+IL N++++  YMK K+G++ W 
Sbjct: 96   TLLQN---HNLPLLIADTVKRHAYQFNTFSLEVSIPPIILHNDNSLRSYMKTKFGSQPWF 152

Query: 584  QEKLLSRRISAKDALKYSIVNPLEKLLDVKSCMSSFPIRLTYTHTKTSKMVQNFVERNQS 763
            QE L +  IS KDALK+S++ PLE LL+ KS M  F IRLTYTH K SK  Q   +  Q+
Sbjct: 153  QENLHTGCISTKDALKFSLIYPLENLLECKSSMGDFRIRLTYTHPKASKGDQKGSDSAQT 212

Query: 764  CKRKRQGTDGTLDILNGSVVPGTECTMDSSIERYFDGLQDRGPSEHFKFPPEKVNEPCRL 943
            CKR++ G                E  +D   ER F    +   S+  +F  EK NEPC  
Sbjct: 213  CKRRKIG----------------ESNIDG--ERPFSNSLENDFSDCGEFLLEKPNEPCHF 254

Query: 944  SILCHRTPIYFCGRYLKYSRNVSQSRWIIDDERMGEASVEEILGNTILPMCRGDNYKFHA 1123
            +  C+RTP+YF GRYLKYSRNVSQ+ WIIDDERMGEASVEEI+G  IL  C+GD++KFHA
Sbjct: 255  AFFCYRTPLYFGGRYLKYSRNVSQTCWIIDDERMGEASVEEIIGGNILQSCQGDSFKFHA 314

Query: 1124 AGSKDVGFRSAFLGR 1168
            AG +D+  R    GR
Sbjct: 315  AGREDIDVRMLGPGR 329