BLASTX nr result
ID: Paeonia22_contig00021930
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00021930
(798 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 108 4e-71
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 108 2e-70
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 108 2e-70
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 105 2e-69
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 105 2e-69
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 105 2e-69
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 105 4e-69
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 105 4e-69
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 104 9e-68
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 108 3e-63
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 108 4e-62
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 117 5e-62
gb|ABG22121.1| polyprotein [Solanum melongena] 123 7e-61
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 112 4e-60
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 102 4e-58
emb|CAN60145.1| hypothetical protein VITISV_019412 [Vitis vinifera] 97 3e-57
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 115 4e-57
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 105 6e-57
emb|CAN60396.1| hypothetical protein VITISV_018063 [Vitis vinifera] 100 4e-55
emb|CAN82357.1| hypothetical protein VITISV_005778 [Vitis vinifera] 100 2e-53
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 108 bits (270), Expect(4) = 4e-71
Identities = 60/106 (56%), Positives = 73/106 (68%), Gaps = 7/106 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL++SLYG KQSPRQWY +FD FM+ + +S D CVY K + S IYLLLY
Sbjct: 945 KEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLY 1003
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKN 294
VDD+LIA KS K+QLS F+MKDL KKIL +EI RDKN
Sbjct: 1004 VDDILIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDKN 1049
Score = 107 bits (266), Expect(4) = 4e-71
Identities = 52/75 (69%), Positives = 59/75 (78%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V KG++Q G+DYN+VFSPVVKHSSIR ++VA DLEL QLDVKTAFLHG L+EEIYM
Sbjct: 875 VAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYM 934
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKED V
Sbjct: 935 DQPEGFIVPGKEDYV 949
Score = 64.7 bits (156), Expect(4) = 4e-71
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPDLS A+S+VSRYM +PGKEHW+AV+W
Sbjct: 1113 LMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAVQW 1148
Score = 57.8 bits (138), Expect(4) = 4e-71
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ++Y+ KVLQ F M + K STP++PH KLSA+ +TDE+ Y++RVPY+S V
Sbjct: 1055 LSQQSYIKKVLQCFNM-HDAKPVSTPIAPHFKLSALQCANTDEDVEYMSRVPYSSAV 1110
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 108 bits (271), Expect(4) = 2e-70
Identities = 60/106 (56%), Positives = 73/106 (68%), Gaps = 7/106 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL++SLYG KQSPRQWY +FD FM+ + +S D CVY K + S IYLLLY
Sbjct: 945 KEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLY 1003
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKN 294
VDDMLIA KS K+QLS F+MKDL KKIL +EI RD+N
Sbjct: 1004 VDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRN 1049
Score = 104 bits (259), Expect(4) = 2e-70
Identities = 50/75 (66%), Positives = 57/75 (76%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V KG++Q G+DYN+VFSPVVKHSSIR ++V DLEL QLDVKT FLHG L+EEIYM
Sbjct: 875 VAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYM 934
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKED V
Sbjct: 935 DQPEGFIVPGKEDYV 949
Score = 61.6 bits (148), Expect(4) = 2e-70
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC PDLS A+S+VSRYM +PGKEHW+AV+W
Sbjct: 1113 LMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQW 1148
Score = 60.5 bits (145), Expect(4) = 2e-70
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ++Y+ KVLQ+F M + K STP++PH KLSA+ STDE+ Y++RVPY+S V
Sbjct: 1055 LSQQSYIKKVLQRFNM-HDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAV 1110
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 108 bits (269), Expect(4) = 2e-70
Identities = 60/106 (56%), Positives = 72/106 (67%), Gaps = 7/106 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL++SLYG KQSPRQWY +FD FM+ + +S D CVY K + S IYLLLY
Sbjct: 891 KEDDVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSHIYLLLY 949
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKN 294
VDDMLIA KS K+QLS F+MKDL KKIL +EI RD N
Sbjct: 950 VDDMLIAAKSKEQITTLKKQLSSEFDMKDLVASKKILGMEITRDIN 995
Score = 104 bits (260), Expect(4) = 2e-70
Identities = 51/75 (68%), Positives = 57/75 (76%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V KG++Q G+DYN+VFSPVVKHSSIR +VA DLEL QLDVKT FLHG L+EEIYM
Sbjct: 821 VAKGFSQIAGVDYNDVFSPVVKHSSIRTFFCIVAMHDLELEQLDVKTIFLHGELEEEIYM 880
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKED V
Sbjct: 881 DQPEGFIVPGKEDDV 895
Score = 61.2 bits (147), Expect(4) = 2e-70
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ++Y+ KVLQ+F + + K STP++PH KLSA+ STDE+ Y++RVPY+SVV
Sbjct: 1001 LSQQSYIKKVLQRFN-IHDAKPVSTPIAPHFKLSALQCTSTDEDVEYMSRVPYSSVV 1056
Score = 61.2 bits (147), Expect(4) = 2e-70
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RP LS A+S+VSRYM +PGKEHW+AV+W
Sbjct: 1059 LMYAMVCSRPVLSHAMSLVSRYMANPGKEHWKAVQW 1094
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 105 bits (262), Expect(4) = 2e-69
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V +GY+Q G+DYN+VFSPVVKHSSIR L++VA DLEL QLDVKTAFLHG L+E+IYM
Sbjct: 888 VARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYM 947
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKE V
Sbjct: 948 DQPEGFIVPGKEKYV 962
Score = 104 bits (259), Expect(4) = 2e-69
Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 7/105 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E+ +CKL++SLYG KQSPRQW +FD FM+ + +S +D CVY + + + S IYLLLY
Sbjct: 958 KEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHV-NGSPIYLLLY 1016
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDK 297
VDDMLIA KS K+ LS F+MKDL KKIL +EI RD+
Sbjct: 1017 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1061
Score = 63.5 bits (153), Expect(4) = 2e-69
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPDLS A+S+VSRYM +PGKEHW+A++W
Sbjct: 1126 LMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQW 1161
Score = 58.9 bits (141), Expect(4) = 2e-69
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ Y+ KVLQ+F M N K STP++PH KLSA STD E Y++RVPY+S V
Sbjct: 1068 LSQHNYIKKVLQRFNMQ-NAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAV 1123
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 105 bits (262), Expect(4) = 2e-69
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V +GY+Q G+DYN+VFSPVVKHSSIR L++VA DLEL QLDVKTAFLHG L+E+IYM
Sbjct: 886 VARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYM 945
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKE V
Sbjct: 946 DQPEGFIVPGKEKYV 960
Score = 104 bits (259), Expect(4) = 2e-69
Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 7/105 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E+ +CKL++SLYG KQSPRQW +FD FM+ + +S +D CVY + + + S IYLLLY
Sbjct: 956 KEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHV-NGSPIYLLLY 1014
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDK 297
VDDMLIA KS K+ LS F+MKDL KKIL +EI RD+
Sbjct: 1015 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDR 1059
Score = 63.2 bits (152), Expect(4) = 2e-69
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPDLS A+S+VSRYM +PGKEHW+ V+W
Sbjct: 1124 LMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQW 1159
Score = 58.9 bits (141), Expect(4) = 2e-69
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ Y+ KVLQ+F M N K STP++PH KLSA STD E Y++RVPY+S V
Sbjct: 1066 LSQHNYIKKVLQRFNMQ-NAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAV 1121
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 105 bits (261), Expect(4) = 2e-69
Identities = 60/106 (56%), Positives = 71/106 (66%), Gaps = 7/106 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL++SLYG KQSPRQWY +FD FM+ + S D CVY K + S IYLLLY
Sbjct: 278 KEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKWSEFDSCVYI-KFVNGSPIYLLLY 336
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKN 294
VDDMLIA KS K+QLS F+MKDL KKIL +EI RD N
Sbjct: 337 VDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDIN 382
Score = 103 bits (258), Expect(4) = 2e-69
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V KG++Q G+DYN+VFSPVVKHSSIR ++VA DLEL QLDVKT FLHG L++EIYM
Sbjct: 208 VAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGELEDEIYM 267
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKED V
Sbjct: 268 DQPEGFIVPGKEDYV 282
Score = 64.3 bits (155), Expect(4) = 2e-69
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY M+C RPDLS A+S+VSRYM +PGKEHW+AV+W
Sbjct: 446 LMYAMICSRPDLSHAMSLVSRYMANPGKEHWKAVQW 481
Score = 58.5 bits (140), Expect(4) = 2e-69
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ++Y+ KVL+ F M + K STP++ H KLSA+ STDE+ GY++RVPY+S V
Sbjct: 388 LSQQSYIKKVLEHFNM-HDAKPISTPIAAHFKLSALQCASTDEDVGYMSRVPYSSAV 443
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 105 bits (262), Expect(4) = 4e-69
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V +GY+Q G+DYN+VFSPVVKHSSIR L++VA DLEL QLDVKTAFLHG L+E+IYM
Sbjct: 886 VARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYM 945
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKE V
Sbjct: 946 DQPEGFIVPGKEKYV 960
Score = 104 bits (259), Expect(4) = 4e-69
Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 7/105 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E+ +CKL++SLYG KQSPRQW +FD FM+ + +S +D CVY + + + S IYLLLY
Sbjct: 956 KEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHV-NGSPIYLLLY 1014
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDK 297
VDDMLIA KS K+ LS F+MKDL KKIL +EI RD+
Sbjct: 1015 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1059
Score = 64.7 bits (156), Expect(4) = 4e-69
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPDLS A+S+VSRYM +PGKEHW+AV+W
Sbjct: 1124 LMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQW 1159
Score = 56.6 bits (135), Expect(4) = 4e-69
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ Y+ KVLQ+F M N K STP++PH KLSA S D E Y++RVPY+S V
Sbjct: 1066 LSQHNYIKKVLQRFNMQ-NAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAV 1121
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 105 bits (262), Expect(4) = 4e-69
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V +GY+Q G+DYN+VFSPVVKHSSIR L++VA DLEL QLDVKTAFLHG L+E+IYM
Sbjct: 886 VARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYM 945
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKE V
Sbjct: 946 DQPEGFIVPGKEKYV 960
Score = 104 bits (259), Expect(4) = 4e-69
Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 7/105 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E+ +CKL++SLYG KQSPRQW +FD FM+ + +S +D CVY + + + S IYLLLY
Sbjct: 956 KEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHV-NGSPIYLLLY 1014
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDK 297
VDDMLIA KS K+ LS F+MKDL KKIL +EI RD+
Sbjct: 1015 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDR 1059
Score = 64.7 bits (156), Expect(4) = 4e-69
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPDLS A+S+VSRYM +PGKEHW+AV+W
Sbjct: 1124 LMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQW 1159
Score = 56.6 bits (135), Expect(4) = 4e-69
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ Y+ KVLQ+F M N K STP++PH KLSA S D E Y++RVPY+S V
Sbjct: 1066 LSQHNYIKKVLQRFNMQ-NAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAV 1121
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 104 bits (260), Expect(4) = 9e-68
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V KG++Q G+DYN+VFSPVVKHSSIR ++VA DLEL QLDVKTAFLHG L+EEIYM
Sbjct: 559 VAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYM 618
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKE V
Sbjct: 619 DQPEGFIVPGKEGYV 633
Score = 100 bits (250), Expect(4) = 9e-68
Identities = 58/106 (54%), Positives = 71/106 (66%), Gaps = 7/106 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL++S YG KQSPRQWY +FD FM+ + +S D CVY K + S IY LLY
Sbjct: 629 KEGYVCKLKRSFYGLKQSPRQWYKRFDLFMLSHGFKRSEFDSCVYI-KFVNGSPIY-LLY 686
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKN 294
VDDMLIA KS K+QLS F+MKDL KKIL +EI RD+N
Sbjct: 687 VDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRN 732
Score = 64.7 bits (156), Expect(4) = 9e-68
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPDLS A+S+VSRYM +PGKEHW+AV+W
Sbjct: 796 LMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQW 831
Score = 56.2 bits (134), Expect(4) = 9e-68
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ++Y+ VLQ+F M + K S P++PH KLS + STDE+ Y++RVPY+S V
Sbjct: 738 LSQQSYIKNVLQRFNM-HDAKLVSIPIAPHFKLSVLQCASTDEDVEYMSRVPYSSAV 793
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 108 bits (271), Expect(4) = 3e-63
Identities = 57/116 (49%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL+KSLYG KQ+PRQWY++FD FM +Y ++ D CVYFRK + +FI L LY
Sbjct: 309 KENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYKRTTADPCVYFRKFSEGNFIILCLY 368
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKNGEKSLVVAEN 264
VDDMLI + K LS F+MKDL K+IL +EI RD+ K + EN
Sbjct: 369 VDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLWLSQEN 424
Score = 97.8 bits (242), Expect(4) = 3e-63
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
VVKG QK+GID++E+F+PVVK +SIR++L L +LEL QLDVKTAFLHG+L EEIYM
Sbjct: 239 VVKGCHQKKGIDFDEIFAPVVKMTSIRMILGLATCLNLELEQLDVKTAFLHGDLHEEIYM 298
Query: 616 THPSGFKVAGKEDCV 572
P GF+V GKE+ V
Sbjct: 299 EQPEGFEVKGKENFV 313
Score = 58.5 bits (140), Expect(4) = 3e-63
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPD++ AV +VSRY+ +P K HW+AVKW
Sbjct: 478 LMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKW 513
Score = 45.8 bits (107), Expect(4) = 3e-63
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ+ Y+ +VL++F M N K +TPL+ H KLS +T++E+ ++ +PY+SVV
Sbjct: 420 LSQENYIERVLERFNMK-NAKPVNTPLAAHFKLSKRCCPTTEKEKESMSHIPYSSVV 475
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 108 bits (269), Expect(4) = 4e-62
Identities = 60/106 (56%), Positives = 73/106 (68%), Gaps = 7/106 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL++SLYG KQSPRQWY +FD FM+ + +S D CVY K + S IYLLLY
Sbjct: 798 KEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYI-KFVNVSPIYLLLY 856
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKN 294
VDDMLIA KS K+QLS F+MKDL KKIL +EI RD+N
Sbjct: 857 VDDMLIAAKSKEQITTLKKQLSSEFDMKDLDAAKKILGMEITRDRN 902
Score = 78.6 bits (192), Expect(4) = 4e-62
Identities = 39/55 (70%), Positives = 42/55 (76%)
Frame = -3
Query: 736 VKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYMTHPSGFKVAGKEDCV 572
VKHSSIR ++VA DLEL QLDVKTAFLHG L+EEIYM P GF V GKED V
Sbjct: 748 VKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYV 802
Score = 60.5 bits (145), Expect(4) = 4e-62
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ++Y+ KVLQ+F M +TK ST ++PH KLSA+ STDE+ Y++RVPY+SVV
Sbjct: 908 LSQQSYIKKVLQRFNM-HDTKPVSTHIAPHFKLSALQCASTDEDVEYMSRVPYSSVV 963
Score = 60.5 bits (145), Expect(4) = 4e-62
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC R DLS A+S+VSRYM +PGKEHW+A++W
Sbjct: 966 LMYAMVCSRLDLSHAMSLVSRYMANPGKEHWKAIQW 1001
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 117 bits (292), Expect(4) = 5e-62
Identities = 59/103 (57%), Positives = 75/103 (72%), Gaps = 7/103 (6%)
Frame = -2
Query: 581 RLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLYVDD 402
++C L++SLYG KQSPRQW +FD FM G KYT+S +D CVYF+K D++IYLLLYVDD
Sbjct: 958 KVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDD 1017
Query: 401 MLIADKSKRQ-------LSL*FEMKDLSEDKKILAVEIQRDKN 294
MLIA +K + LS FEMKDL + KKIL +EI RD++
Sbjct: 1018 MLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRD 1060
Score = 102 bits (253), Expect(4) = 5e-62
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V KG+ QKEG+DYNE+FSPVVKH SIR LL++V +++EL Q+DVKTAFLHG L+EEIYM
Sbjct: 885 VAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYM 944
Query: 616 THPSGFKV 593
P GF++
Sbjct: 945 AQPEGFEI 952
Score = 49.7 bits (117), Expect(4) = 5e-62
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
+MY M+ RPDL+ ++ ++SR+M P K+HWQAVKW
Sbjct: 1124 IMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKW 1159
Score = 38.5 bits (88), Expect(4) = 5e-62
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ+ Y+ KVL+ F M N K STPL H KL A +E+ + VPYA+ +
Sbjct: 1066 LSQEGYVKKVLRSFQM-DNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTI 1121
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 123 bits (309), Expect(4) = 7e-61
Identities = 66/109 (60%), Positives = 78/109 (71%), Gaps = 7/109 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL KSLY KQS RQWY QFD+FM +YT+S +DHCVYF KL++ S++YLLLY
Sbjct: 28 KENWVCKLNKSLY-MKQSSRQWYKQFDKFMQDQRYTRSKYDHCVYFHKLQNGSYVYLLLY 86
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKNGEK 285
VDDMLIA KS K QLS FEMKDL E KKIL +EI RD+ K
Sbjct: 87 VDDMLIAAKSQFEIDRLKAQLSKEFEMKDLGEAKKILGMEISRDRQRGK 135
Score = 70.1 bits (170), Expect(4) = 7e-61
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC R D+SQAVS+VSRYMHDPGK HWQAVKW
Sbjct: 197 LMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKW 232
Score = 67.8 bits (164), Expect(4) = 7e-61
Identities = 34/64 (53%), Positives = 47/64 (73%)
Frame = -3
Query: 298 RMERRV*LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPY 119
R ++ L+QK YL KVLQ+FG+ ++K STPL+PH KLS+ +S TDEER Y+ +VPY
Sbjct: 131 RQRGKLCLTQKQYLKKVLQRFGINDDSKPVSTPLAPHLKLSSQLSPKTDEEREYMAKVPY 190
Query: 118 ASVV 107
A+ V
Sbjct: 191 ANAV 194
Score = 42.0 bits (97), Expect(4) = 7e-61
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3
Query: 667 DVKTAFLHGNLDEEIYMTHPSGFKVAGKEDCV 572
DVKTAF HG+L EEIY G KVA KE+ V
Sbjct: 1 DVKTAFFHGDLKEEIYYDFSQGIKVASKENWV 32
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 112 bits (281), Expect(4) = 4e-60
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 7/106 (6%)
Frame = -2
Query: 587 ERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLYV 408
E ++C+L+KSLYG KQSPRQW +FDRFM ++ +S HD CVY + + + FIYLLLYV
Sbjct: 979 ENKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYV 1038
Query: 407 DDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKNG 291
DDMLIA S K QLS FEMKD+ +IL ++I RD+ G
Sbjct: 1039 DDMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKG 1084
Score = 99.0 bits (245), Expect(4) = 4e-60
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V KGY Q+EG+DY E+F+PVVKH SIRIL++LV DLEL Q+DVKT FLHG+L+EE+YM
Sbjct: 908 VAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYM 967
Query: 616 THPSGFKVAGKEDCV 572
P GF E+ V
Sbjct: 968 EQPEGFVSDSSENKV 982
Score = 52.4 bits (124), Expect(4) = 4e-60
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
+MY M+ RPDL+ A+ ++SRYM PG HW+AVKW
Sbjct: 1144 IMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKW 1179
Score = 36.6 bits (83), Expect(4) = 4e-60
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ+ Y+ KVL +F M G K T+ P+ H KL+A+ ++E VPY+S V
Sbjct: 1089 LSQEIYIRKVLDRFNMSG-AKMTNAPVGAHFKLAAVRE---EDECVDTDVVPYSSAV 1141
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 102 bits (253), Expect(4) = 4e-58
Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 7/105 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +C L KSLYG KQ+PRQW +F+ +M + +S +D C Y +KL DDS +YLL Y
Sbjct: 983 KENEVCLLNKSLYGLKQAPRQWNEKFNHYMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFY 1042
Query: 410 VDDMLIA-------DKSKRQLSL*FEMKDLSEDKKILAVEIQRDK 297
VDDML+A D K++LS+ FEMKDL KKIL +EI D+
Sbjct: 1043 VDDMLVAANNMQAIDALKKELSIKFEMKDLGAAKKILGIEIIIDR 1087
Score = 100 bits (249), Expect(4) = 4e-58
Identities = 49/73 (67%), Positives = 60/73 (82%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V KGYAQ+EG+DY+E+F+PVVKH SIRILL++VAQ +LEL QLDVKTAFLHG L E+IYM
Sbjct: 913 VAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQENLELEQLDVKTAFLHGELKEKIYM 972
Query: 616 THPSGFKVAGKED 578
P G + KE+
Sbjct: 973 MPPEGCESLFKEN 985
Score = 50.1 bits (118), Expect(4) = 4e-58
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
+MY M+ RPDL+ V +VSR+M P KEHW VKW
Sbjct: 1152 IMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKW 1187
Score = 41.6 bits (96), Expect(4) = 4e-58
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMS--LSTDEERGYITRVPYASVV 107
LSQ++YL KVL+ F M+ +K TPL H K+ + LST+EE Y+ VPY+S V
Sbjct: 1094 LSQESYLNKVLKTFNML-ESKPALTPLGAHLKMKSATEEKLSTEEE--YMNSVPYSSAV 1149
>emb|CAN60145.1| hypothetical protein VITISV_019412 [Vitis vinifera]
Length = 1227
Score = 96.7 bits (239), Expect(4) = 3e-57
Identities = 45/75 (60%), Positives = 60/75 (80%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
VVKG+ QKEGIDY E+FSPVVK S+IR++L ++A +L L QLDVKT FLHG+L+E++YM
Sbjct: 796 VVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMMAIENLHLEQLDVKTTFLHGDLEEDLYM 855
Query: 616 THPSGFKVAGKEDCV 572
P GF V G+E+ +
Sbjct: 856 IQPEGFIVQGQENLI 870
Score = 91.3 bits (225), Expect(4) = 3e-57
Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 7/100 (7%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKLRK LYG KQ+PRQWY +FD FM + + DHC Y + D+S+I LLLY
Sbjct: 866 QENLICKLRKILYGLKQAPRQWYKKFDXFMHRIGFKRCEXDHCCYXKSF-DNSYIILLLY 924
Query: 410 VDDMLIA-------DKSKRQLSL*FEMKDLSEDKKILAVE 312
VDDMLIA + K+QLS F MKDL K+IL E
Sbjct: 925 VDDMLIAGSDIEXINNLKKQLSKQFAMKDLGAAKQILESE 964
Score = 57.4 bits (137), Expect(4) = 3e-57
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPD++ AV +VSR+M GK+HW+AVKW
Sbjct: 1018 LMYAMVCTRPDIAXAVGVVSRFMSRXGKQHWEAVKW 1053
Score = 45.8 bits (107), Expect(4) = 3e-57
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -3
Query: 271 QKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
+ Y+ KVL +F M K STPL H KLS S T EER ++++VPYAS +
Sbjct: 962 ESEYVKKVLSRFNM-NEAKPVSTPLGSHFKLSKEQSPKTXEERDHMSKVPYASAI 1015
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 115 bits (289), Expect(4) = 4e-57
Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 7/120 (5%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E ++C L++SLYG KQSPRQWY +FD+FM Y++S D+CVY RKL + S++YLLLY
Sbjct: 597 KENQVCLLKRSLYGLKQSPRQWYKRFDKFMTSVGYSRSKFDNCVYMRKLTNGSYVYLLLY 656
Query: 410 VDDMLIADKS-------KRQLSL*FEMKDLSEDKKILAVEIQRDKNGEKSLVVAENIFVE 252
VDDML+A KS K QL FEMKDL KKIL +E RD++ L +++ ++E
Sbjct: 657 VDDMLLASKSITEIAHLKTQLQSEFEMKDLGCAKKILGIEPYRDRS-TGILTISQRDYIE 715
Score = 101 bits (251), Expect(4) = 4e-57
Identities = 47/75 (62%), Positives = 61/75 (81%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
V K Y Q+EG+D+NE+FSP+VKH+SIR+LLALV+ ++LEL Q+DV AFLHG L+EEI+M
Sbjct: 527 VAKAYTQREGMDFNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELEEEIFM 586
Query: 616 THPSGFKVAGKEDCV 572
P GF V GKE+ V
Sbjct: 587 QQPKGFIVKGKENQV 601
Score = 39.7 bits (91), Expect(4) = 4e-57
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = -1
Query: 63 VSMVSRYMHDPGKEHWQAVKW 1
VS++SRYM +PG++HW+A+KW
Sbjct: 768 VSLLSRYMSNPGRDHWEALKW 788
Score = 33.9 bits (76), Expect(4) = 4e-57
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVVD 104
+SQ+ Y+ +VL+ F M K TP+ KLS +S T+EE ++ V YA+ ++
Sbjct: 708 ISQRDYIERVLKIFNMDA-AKAVDTPIGAQFKLSYDLSPKTEEEMQDMSNVAYANDIE 764
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 105 bits (263), Expect(4) = 6e-57
Identities = 53/102 (51%), Positives = 72/102 (70%), Gaps = 7/102 (6%)
Frame = -2
Query: 581 RLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLYVDD 402
++C L++SLYG +QSPRQW N+F+ FM Y +S +D CVYF++L+ +IYLLLYVDD
Sbjct: 776 KVCLLKRSLYGLRQSPRQWNNRFNEFMQKIGYERSKYDSCVYFKELQSGEYIYLLLYVDD 835
Query: 401 MLIADKSKRQ-------LSL*FEMKDLSEDKKILAVEIQRDK 297
+LIA + KR L+ FEMKDL + KKIL +EI RD+
Sbjct: 836 ILIASRDKRTVCDLKALLNSEFEMKDLGDAKKILGMEIVRDR 877
Score = 99.8 bits (247), Expect(4) = 6e-57
Identities = 46/66 (69%), Positives = 55/66 (83%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
VVKGY+QKEGIDY E+FSPVVKH SIR+LL++V D+EL Q+DVKTAFLHG LDE IY+
Sbjct: 703 VVKGYSQKEGIDYQEIFSPVVKHVSIRLLLSMVTHCDMELQQMDVKTAFLHGYLDETIYI 762
Query: 616 THPSGF 599
P G+
Sbjct: 763 EQPEGY 768
Score = 52.0 bits (123), Expect(4) = 6e-57
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY M+ RPDL+ +V +V R+M P KEHWQAVKW
Sbjct: 942 LMYSMIGTRPDLAHSVGLVCRFMSKPLKEHWQAVKW 977
Score = 32.3 bits (72), Expect(4) = 6e-57
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
+SQ+ YL KVL FGM K TP+ H KL + + VPY S V
Sbjct: 884 ISQEGYLLKVLGNFGM-DQAKPVFTPMGAHFKLKPATDEEVMRQSEVMRAVPYQSAV 939
>emb|CAN60396.1| hypothetical protein VITISV_018063 [Vitis vinifera]
Length = 1294
Score = 100 bits (250), Expect(4) = 4e-55
Identities = 58/118 (49%), Positives = 74/118 (62%), Gaps = 8/118 (6%)
Frame = -2
Query: 590 RERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLY 411
+E +CKL+KSLYG KQ+PRQWY +FD FM + + DHC YF+ D+S+I LLLY
Sbjct: 855 QENLVCKLKKSLYGLKQAPRQWYTKFDNFMHRIGFKRCEADHCCYFKSF-DNSYIILLLY 913
Query: 410 VDDMLIA-------DKSKRQLSL*FEMKDLSEDKKILAVEIQRDK-NGEKSLVVAENI 261
VDDMLI + K+QLS F MKDL K+IL + I RDK NG L +E +
Sbjct: 914 VDDMLIVGSDIEKNNNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYV 971
Score = 98.2 bits (243), Expect(4) = 4e-55
Identities = 46/75 (61%), Positives = 61/75 (81%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNLDEEIYM 617
VVKG+ QK+GIDY E+FSP+VK S+IR++L +VA +L L QLDVKTAFLHG+L+E++YM
Sbjct: 785 VVKGFQQKKGIDYTEIFSPIVKMSTIRLVLGMVAVENLHLEQLDVKTAFLHGDLEEDLYM 844
Query: 616 THPSGFKVAGKEDCV 572
P GF V G+E+ V
Sbjct: 845 IQPEGFIVQGQENLV 859
Score = 49.3 bits (116), Expect(4) = 4e-55
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ Y+ KVL +F M K STPL H KLS S T+EER +++VPYAS +
Sbjct: 965 LSQSEYVKKVLSRFNM-NEAKPVSTPLGSHFKLSKEQSPKTEEERDQMSKVPYASSI 1020
Score = 35.4 bits (80), Expect(4) = 4e-55
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYM 40
LMY MVC RPD++ V +VSR+M
Sbjct: 1023 LMYAMVCTRPDIAHVVGVVSRFM 1045
>emb|CAN82357.1| hypothetical protein VITISV_005778 [Vitis vinifera]
Length = 1024
Score = 100 bits (248), Expect(4) = 2e-53
Identities = 59/117 (50%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Frame = -2
Query: 587 ERRLCKLRKSLYGSKQSPRQWYNQFDRFMIG*KYTKSYHDHCVYFRKLEDDSFIYLLLYV 408
E +CKLRKSLYG KQ+PRQWY +FD FM + + DHC Y + D+S+I LLLYV
Sbjct: 740 ENLVCKLRKSLYGLKQAPRQWYKKFDSFMHRIGFKRCEADHCCYVKSF-DNSYIILLLYV 798
Query: 407 DDMLIA-------DKSKRQLSL*FEMKDLSEDKKILAVEIQRDK-NGEKSLVVAENI 261
DDMLIA + K+QLS F MKDL K+IL + I RDK NG L +E +
Sbjct: 799 DDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYV 855
Score = 70.5 bits (171), Expect(4) = 2e-53
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -3
Query: 796 VVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLELAQLDVKTAFLHGNL 635
VVKG+ QKEGIDY E+FSPVVK S+IR+LL +V +L L LDVKT F H NL
Sbjct: 689 VVKGFQQKEGIDYTEIFSPVVKMSTIRLLLGMVVAENLHLEXLDVKTTFPHENL 742
Score = 57.0 bits (136), Expect(4) = 2e-53
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = -1
Query: 108 LMYVMVCIRPDLSQAVSMVSRYMHDPGKEHWQAVKW 1
LMY MVC RPD++ AV +VSR+M GK+HW+AVKW
Sbjct: 907 LMYAMVCTRPDIAHAVGVVSRFMSRLGKQHWEAVKW 942
Score = 50.8 bits (120), Expect(4) = 2e-53
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = -3
Query: 277 LSQKTYL*KVLQQFGMVGNTKFTSTPLSPHCKLSAIMSLSTDEERGYITRVPYASVV 107
LSQ Y+ KVL +F M K STPL H KLS S T+EER ++++VPYAS +
Sbjct: 849 LSQSEYVKKVLSRFNM-NEAKPXSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAI 904