BLASTX nr result
ID: Paeonia22_contig00021064
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00021064
(515 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204... 56 4e-15
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A... 59 5e-13
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A... 50 1e-12
ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript... 51 5e-11
ref|XP_004174148.1| PREDICTED: uncharacterized protein LOC101232... 46 1e-10
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 54 2e-09
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 60 2e-09
dbj|BAA77394.1| SAE1-S9-protein [Brassica rapa] 54 4e-09
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 61 5e-09
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr... 50 6e-09
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 60 1e-08
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A... 43 2e-08
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 57 2e-08
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 64 2e-08
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ... 60 6e-08
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop... 60 6e-08
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 55 9e-08
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 50 9e-08
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 52 1e-07
gb|ABW81026.1| reverse transcriptase [Arabidopsis lyrata subsp. ... 61 2e-07
>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
Length = 282
Score = 56.2 bits (134), Expect(2) = 4e-15
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +3
Query: 264 GHIPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIWK 443
G+IPK +F WL +R L T+ +L++ +SC+ C E ++HLFFSC F IW
Sbjct: 134 GNIPKHSFCAWLAIRDRLGTRGRLSRWDRSIPLSCLLCGGNYESRDHLFFSCHFGWEIWS 193
Query: 444 QVL 452
++L
Sbjct: 194 RIL 196
Score = 50.4 bits (119), Expect(2) = 4e-15
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = +1
Query: 7 RIIYDFASSLNAKVCSIIS-NGGWKWPSF*FNA--VLEVINNCSVAPNVNVEDMYVWLP- 174
R+IYD S +A++ + +G W+WP + + + + ++P+V ED +VW+P
Sbjct: 46 RVIYDAGSRWDARLVDFMGRDGDWRWPLVYLDLMDIWDRVQGVRLSPSV--EDRWVWVPG 103
Query: 175 TNSTFFIQFAWNCFRGPISKVDWARLVWYKVTFPR 279
++ +F I AW R S+V W+ L+W P+
Sbjct: 104 SHDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPK 138
>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 288
Score = 58.5 bits (140), Expect(2) = 5e-13
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +3
Query: 264 GHIPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIWK 443
G+IPK +F TWL ++ L T+D+L++ +SC+ C E ++HLFF C F IW
Sbjct: 209 GNIPKHSFYTWLAIKDRLGTRDRLSRWDSSIPLSCILCGRNYESRDHLFFPCPFGWEIWS 268
Query: 444 QVL 452
++L
Sbjct: 269 RIL 271
Score = 41.2 bits (95), Expect(2) = 5e-13
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 7 RIIYDFASSLNAKVCSIIS-NGGWKWPSF*FNAVLEVINNCSVAPNVNVEDMYVWLP-TN 180
R+IYD S +A++ + +G W+W + + V P+ +VEDM+V +P ++
Sbjct: 121 RVIYDADSRRDARLVDFMGRDGDWRWSLVSLDLMDIWDRIQGVRPSPSVEDMWVRVPGSH 180
Query: 181 STFFIQFAWNCFRGPISKVDWARLVWYKVTFPR 279
+F I A R S+V W+ L+W P+
Sbjct: 181 ESFSIVSACEAIRPHSSRVGWSGLLWGGGNIPK 213
>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 342
Score = 50.1 bits (118), Expect(2) = 1e-12
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 7 RIIYDFASSLNAKVCSIIS-NGGWKWPSF*FNAVLEVINNCSVAPNVNVEDMYVWLP-TN 180
R+IYD S + ++ + NG W+W + + V P+ +VED +VW+P +
Sbjct: 119 RVIYDAGSRWDVRLVDFMGRNGDWRWSLVSLDLMDIWDRVQGVRPSPSVEDRWVWVPGSR 178
Query: 181 STFFIQFAWNCFRGPISKVDWARLVWYKVTFPR 279
+F I AW R S+V W+ L+W P+
Sbjct: 179 DSFSITSAWETIRPHSSRVGWSGLLWGGGNIPK 211
Score = 48.5 bits (114), Expect(2) = 1e-12
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 264 GHIPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFF 413
G+IPK +F WL +R L+T+D+L++ +SC+ C E +NHLFF
Sbjct: 207 GNIPKHSFCAWLAIRDRLSTRDRLSRWDRSIPLSCLLCGGNYESRNHLFF 256
>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
[Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
RNA-directed DNA polymerase (reverse
transcriptase)-related protein [Arabidopsis thaliana]
Length = 289
Score = 51.2 bits (121), Expect(2) = 5e-11
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 261 QGHIPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIW 440
+G +PK AF W+ L T+ +L ++S C C E ++HL FSC+F A +W
Sbjct: 134 KGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTIETESRDHLLFSCEFAAQVW 193
Query: 441 K 443
+
Sbjct: 194 R 194
Score = 41.6 bits (96), Expect(2) = 5e-11
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +1
Query: 34 LNAKVCSIISNGGWKWP---SF*FNAVLEVINNCSVAPNVNVEDMYVWLPTNST---FFI 195
LNA+V + GWK P S A+ + I+ + +ED + W+ F
Sbjct: 52 LNARVVEALGVNGWKLPLSRSAPAQAIHDHISTITTPSPATIEDSFDWVVGGVVCQGFSS 111
Query: 196 QFAWNCFRGPISKVDWARLVWYKVTFPR 279
W+ R ++DWA+ VW+K P+
Sbjct: 112 ARTWDAIRPRAPELDWAKAVWFKGAVPK 139
>ref|XP_004174148.1| PREDICTED: uncharacterized protein LOC101232502 [Cucumis sativus]
Length = 191
Score = 46.2 bits (108), Expect(2) = 1e-10
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 7 RIIYDFASSLNAKVCSIIS-NGGWKWPSF*FNAVLEVINNCSVAPNVNVEDMYVWLPTN- 180
R+IYD S +A++ + +G W+ P + + V P+++VED +VW+P +
Sbjct: 29 RVIYDAGSQRDARLVDFMGQDGDWRCPLVSLDLMDIWDRIQGVWPSLSVEDRWVWVPGSL 88
Query: 181 STFFIQFAWNCFRGPISKVDWARLVWYKVTFPR 279
+F I W R S+V W+ L+W P+
Sbjct: 89 DSFSIASVWETIRPHSSRVGWSGLLWGGGNIPK 121
Score = 45.4 bits (106), Expect(2) = 1e-10
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 264 GHIPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFF 413
G+IPK +F WL +R L T+D+L++ +SC+ C E ++HLFF
Sbjct: 117 GNIPKHSFYAWLAIRDMLGTRDRLSRWDRSIPLSCMLCGRNFESRDHLFF 166
>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
sativus]
Length = 382
Score = 53.9 bits (128), Expect(2) = 2e-09
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +1
Query: 7 RIIYDFASSLNAKVCS-IISNGGWKWP--SF*FNAVLEVINNCSVAPNVNVEDMYVWLPT 177
R+IYD S +A++ ++ +G W+WP S + + I V P+ +VED +VW+P
Sbjct: 233 RVIYDAGSRRDARLVDFMVRDGDWRWPLVSLDLMDIWDWIQG--VRPSSSVEDRWVWVPG 290
Query: 178 N-STFFIQFAWNCFRGPISKVDWARLVWYKVTFPR 279
+ +F I AW R S+V W+ L+W + P+
Sbjct: 291 SLDSFSIASAWETIRPHSSRVGWSGLLWDRGNIPK 325
Score = 33.5 bits (75), Expect(2) = 2e-09
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 261 QGHIPKVAFITWLVVRGGLATQDKLTQ 341
+G+IPK +F WL +R L T+D+L+Q
Sbjct: 320 RGNIPKHSFYAWLAIRDRLGTRDRLSQ 346
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 60.1 bits (144), Expect(2) = 2e-09
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Frame = +3
Query: 273 PKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIW---- 440
PK +F+TWL L T DK+ + CVFC +E ++HLFFSC + + +W
Sbjct: 1214 PKYSFVTWLAFHNRLTTSDKICKWNSGARYDCVFCGEELETRDHLFFSCPYSSHVWFSLT 1273
Query: 441 ------KQVLRWSLIVVDMVD 485
+ +L W+LI ++D
Sbjct: 1274 KGLLNGRNILNWNLITPHLLD 1294
Score = 26.9 bits (58), Expect(2) = 2e-09
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +1
Query: 154 DMYVWLPTNSTFFIQFA----WNCFRGPISKVDWARLVWYKVTFPR 279
D +W TF F+ W R + DW R VW+ + P+
Sbjct: 1170 DRSLWKQKEDTFKSSFSSSKTWQQIRSISLRCDWYRGVWFSASTPK 1215
>dbj|BAA77394.1| SAE1-S9-protein [Brassica rapa]
Length = 255
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +3
Query: 270 IPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIW 440
+P+ FITWL + L T+D+L SCV C VE +HLFF C F +W
Sbjct: 138 VPRCTFITWLAMLERLPTRDRLISWGLTVPNSCVLCNGGVESHSHLFFECSFAVGVW 194
Score = 32.7 bits (73), Expect(2) = 4e-09
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Frame = +1
Query: 34 LNAKVCSIISNGGWKWP--SF*FNAVLEVINNCSVAPNVNVE-DMYVWL--PT---NSTF 189
LNA V + NG W P F L++I + P N + D++ W PT + F
Sbjct: 51 LNASVADAVQNGHWYLPPARSEFAETLQIILSTITPPTDNNDIDIFYWRGGPTGGFTNKF 110
Query: 190 FIQFAWNCFRGPISKVDWARLVWYKVTFPR 279
+ W P +V W V +K PR
Sbjct: 111 SSKVTWELLCVPSPEVTWHSTVGFKEEVPR 140
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 61.2 bits (147), Expect(2) = 5e-09
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +3
Query: 267 HIPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIWKQ 446
H+PK AFI W+V L T+D+L + F +CV C L E + HLFF C F + IW
Sbjct: 995 HVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQFSSEIWSF 1054
Query: 447 VLR 455
+R
Sbjct: 1055 FMR 1057
Score = 24.6 bits (52), Expect(2) = 5e-09
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Frame = +1
Query: 151 EDMYVW-----LPTNSTFFIQFAWNCFRGPISKVDWARLVWYKVTFPR 279
+D Y+W P+N F W+ + + V W + VW+K P+
Sbjct: 952 DDTYLWKIGHHAPSNR-FSTADTWSYLQPSSTSVLWHKAVWFKDHVPK 998
>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 209
Score = 50.4 bits (119), Expect(2) = 6e-09
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 261 QGHIPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPI 437
+G IPK AFI+W+ +R L T+DKL C+ C + E + HLFF C F I
Sbjct: 151 KGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLCNAFDETRQHLFFDCVFAGEI 209
Score = 35.4 bits (80), Expect(2) = 6e-09
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Frame = +1
Query: 37 NAKVCSIISNGGWKW--PSF*FNAVLEVINNC---SVAPNVNVE---DMYVWLPTNSTFF 192
NA V + +G W W S N +++++ NC S N+ V+ D+++W S
Sbjct: 65 NASVADALRDGVW-WINGSRSRNPIIQLLKNCLPLSSVVNLQVDAEDDLFMWKVGGSEAS 123
Query: 193 IQFA----WNCFRGPISKVDWARLVWYKVTFPR 279
+ F+ W KVDW + +W+K P+
Sbjct: 124 VGFSSAATWIHLNPVGEKVDWHKAIWFKGRIPK 156
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 60.5 bits (145), Expect(2) = 1e-08
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +3
Query: 273 PKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIWKQVL 452
PK +F WL V+ L+T DK+ Q S +CV C + +E +NHLFFSC + A IW+ +
Sbjct: 497 PKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCYTAEIWENLA 556
Query: 453 R 455
+
Sbjct: 557 K 557
Score = 24.3 bits (51), Expect(2) = 1e-08
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +1
Query: 127 SVAPNVNVEDMYVWLPTNSTFFIQFA----WNCFRGPISKVDWARLVWYKVTFPR 279
SV N+ D +W N + +F+ WN R + V W +W+ P+
Sbjct: 445 SVQTTTNM-DSVLWRGRNDEYMPKFSTRDTWNQTRNTSTPVTWHMGIWFAHATPK 498
>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 409
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 270 IPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFC-RSLVEDKNHLFFSCDFIAPIW 440
IP+++ +W V+RG + ++D L + + + CV C R H+F +C F+A +W
Sbjct: 74 IPRISLHSWKVLRGRVLSEDLLQRRGIVLASRCVLCGRDCESSFPHIFLTCSFVASLW 131
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 67 GGWKWP---SF*FNAVLEVINNCSVAPNVNVEDMYVWLPTNS-TFFIQFAWNCFRGPISK 234
G W +P F F + ++IN+ ++ ++ D +W+P++S + A+ R +
Sbjct: 2 GPWNFPMLLQFHFLDICKLINDVPISIVPDMSDKLIWVPSSSGELLAKEAFQFMRPRLPS 61
Query: 235 VDWARLVWYKVTFPR 279
+DW++L+W K PR
Sbjct: 62 LDWSKLIWSKFIIPR 76
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 57.4 bits (137), Expect(2) = 2e-08
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +3
Query: 270 IPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIWKQV 449
IPK AF WL V L+T D++T +C+ C +E ++HLFFSC F IW+ +
Sbjct: 315 IPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSCPFATEIWEPL 374
Query: 450 LR 455
+
Sbjct: 375 AK 376
Score = 26.6 bits (57), Expect(2) = 2e-08
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = +1
Query: 151 EDMYVWLPTNSTFFIQFA----WNCFRGPISKVDWARLVWYKVTFPR 279
ED +W + F F+ WN R +KV W + VW+ P+
Sbjct: 271 EDRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPK 317
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/79 (41%), Positives = 43/79 (54%)
Frame = +3
Query: 273 PKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIWKQVL 452
P+ FI WL G L+T+D+L + ++ SC FC S E NHLFF CD +W +VL
Sbjct: 354 PRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFC-SEEESMNHLFFVCDNSKRVWMEVL 412
Query: 453 RWSLIVVDMVD*DATLVWL 509
+W I D D L WL
Sbjct: 413 QWVQIRHDPSDWPNELHWL 431
>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 637
Score = 60.5 bits (145), Expect(2) = 6e-08
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Frame = +3
Query: 273 PKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIW---- 440
PK +F+TWL LAT D+L + +CVFC +E ++HLFFSC + + IW
Sbjct: 290 PKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALA 349
Query: 441 ------KQVLRWSLIVVDMVD 485
+ V WSLI ++D
Sbjct: 350 KGLLNGRNVSSWSLITPHLLD 370
Score = 21.9 bits (45), Expect(2) = 6e-08
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = +1
Query: 154 DMYVWLPTNSTFFIQFA----WNCFRGPISKVDWARLVWYKVTFPR 279
D +W +F F+ W R ++ +W R VW+ + P+
Sbjct: 246 DRSLWKQKEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPK 291
>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
Length = 278
Score = 60.5 bits (145), Expect(2) = 6e-08
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Frame = +3
Query: 273 PKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIW---- 440
PK +F+TWL LAT D+L + +CVFC +E ++HLFFSC + + IW
Sbjct: 122 PKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALA 181
Query: 441 ------KQVLRWSLIVVDMVD 485
+ V WSLI ++D
Sbjct: 182 KGLLNGRNVSSWSLITPHLLD 202
Score = 21.9 bits (45), Expect(2) = 6e-08
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Frame = +1
Query: 154 DMYVWLPTNSTFFIQFA----WNCFRGPISKVDWARLVWYKVTFPR 279
D +W +F F+ W R ++ +W R VW+ + P+
Sbjct: 78 DRSLWKQKEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPK 123
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 54.7 bits (130), Expect(2) = 9e-08
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +3
Query: 273 PKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIWKQVL 452
PK +F +WL G L T D++ + C+FC+ +E ++HLFF+C F + IW +
Sbjct: 1067 PKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIWVDLA 1126
Query: 453 R 455
R
Sbjct: 1127 R 1127
Score = 26.9 bits (58), Expect(2) = 9e-08
Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 151 EDMYVWLPTNSTFFIQFA----WNCFRGPISKVDWARLVWYKVTFPR 279
ED +W + F F+ W+ R ++V W +++W+ P+
Sbjct: 1022 EDKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPK 1068
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 50.4 bits (119), Expect(2) = 9e-08
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +3
Query: 261 QGHIPKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIW 440
+G +PK AF W+ L T+ +L ++S +CV C E ++HL C+F A +W
Sbjct: 1058 KGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDACVLCSFASESRDHLLLICEFSAQVW 1117
Query: 441 KQVLR 455
+ V R
Sbjct: 1118 RLVFR 1122
Score = 31.2 bits (69), Expect(2) = 9e-08
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Frame = +1
Query: 7 RIIYDFASS-----LNAKVCSIISNGGWKWPSF*FNAVLEVINN--CSV-APNVNVEDM- 159
RII D S L AKV S S GW+ P +A + I++ C+V P+ ED+
Sbjct: 961 RIIGDIGPSSLRVPLLAKVASAFSEDGWRLPVS-RSAPAKGIHDHLCTVPVPSTAQEDVD 1019
Query: 160 -YVWLPTN---STFFIQFAWNCFRGPISKVDWARLVWYKVTFPR 279
Y W F W R + WA +W+K P+
Sbjct: 1020 RYEWSVNGFLCQGFSAAKTWEAIRPKATVKSWASSIWFKGAVPK 1063
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 52.4 bits (124), Expect(2) = 1e-07
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 273 PKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIW 440
PK +F WL L+T D++ + + S SCVFC + ++HLFF+C + + +W
Sbjct: 1291 PKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCNHPTKSRDHLFFNCPYSSEVW 1346
Score = 28.9 bits (63), Expect(2) = 1e-07
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +1
Query: 154 DMYVWLPTNSTFFIQFA----WNCFRGPISKVDWARLVWYKVTFPR 279
D VW N + QF+ WN R +KV W + VW+ P+
Sbjct: 1247 DDVVWRGRNDIYKPQFSTRDTWNNIRTTATKVTWYKGVWFYQATPK 1292
>gb|ABW81026.1| reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +3
Query: 273 PKVAFITWLVVRGGLATQDKLTQCRFLESMSCVFCRSLVEDKNHLFFSCDFIAPIWKQVL 452
PK AF TWLV + +AT D++ + SCVFC+ E K+H+FF+C + +WK+++
Sbjct: 52 PKYAFFTWLVAKNRIATGDRMIKWNQNVDASCVFCKDSRETKDHMFFNCPYSRTVWKELV 111
Query: 453 RWSLI 467
L+
Sbjct: 112 SGLLL 116