BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00020904
         (827 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   260   4e-67
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   258   2e-66
ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   256   9e-66
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   249   9e-64
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   249   9e-64
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   249   1e-63
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   249   1e-63
gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus...   245   2e-62
ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [A...   245   2e-62
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...   242   1e-61
ref|XP_007009966.1| Pseudouridine synthase family protein isofor...   241   2e-61
ref|XP_007009965.1| Pseudouridine synthase family protein isofor...   241   2e-61
ref|XP_007009964.1| Pseudouridine synthase family protein isofor...   241   2e-61
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   239   9e-61
ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prun...   238   2e-60
ref|XP_007009963.1| Pseudouridine synthase family protein isofor...   235   2e-59
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   233   5e-59
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   233   7e-59
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...   229   7e-58
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   229   7e-58

>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 1 [Vitis vinifera]
          Length = 393

 Score =  260 bits (665), Expect = 4e-67
 Identities = 135/211 (63%), Positives = 153/211 (72%), Gaps = 2/211 (0%)
 Frame = +2

Query: 200 SSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQPQSGQLFIPWIVRDENGNLTLQ 379
           ++  EFNI+FA                     + +  +PQS  L IPWIVRDENGNL +Q
Sbjct: 48  TTSAEFNISFAP--------------------KSKNPKPQSETLLIPWIVRDENGNLRVQ 87

Query: 380 SQPPARFVQAMAFADXXXXXXXXXXXXXXD--AGAQPKHSKAARRFYNENFREPPQRLSK 553
           S PP R++Q MA A                     +PK+SKAARRFYNENFR+PPQRLSK
Sbjct: 88  STPPERYLQDMAKAKALSAKKKKKKEESTARAVAVEPKYSKAARRFYNENFRDPPQRLSK 147

Query: 554 VLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYF 733
           VLAAAGVASRR+SEELIF+GRVTVNGSVCNTPQTRVDP RD+IYVNGNRLPKKLPPKVY 
Sbjct: 148 VLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTRVDPARDMIYVNGNRLPKKLPPKVYL 207

Query: 734 ALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           ALNKPKGYICS+GEKESKSV+CLFD Y+KSW
Sbjct: 208 ALNKPKGYICSSGEKESKSVLCLFDDYLKSW 238


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  258 bits (658), Expect = 2e-66
 Identities = 140/227 (61%), Positives = 153/227 (67%), Gaps = 9/227 (3%)
 Frame = +2

Query: 173 RTRPSFRIFSSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQPQ-----SGQLFI 337
           RT  +  + SS T+FNITFA                      D    P        QL+I
Sbjct: 32  RTFITSSLSSSSTKFNITFAPPKPKPKPKPEPAIPINSDSDSDSNSVPNLEAEIGDQLYI 91

Query: 338 PWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXDAGA----QPKHSKAAR 505
           PWIVRDE GNLTLQS PPAR +  MA A                A      +PKHSKAAR
Sbjct: 92  PWIVRDEKGNLTLQSTPPARLLHEMANASTSKKKKKGKEVASKAATVVPTPEPKHSKAAR 151

Query: 506 RFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIY 685
           RFYNENFR+PPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVC TPQT+VDP RD+IY
Sbjct: 152 RFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIY 211

Query: 686 VNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           VNGNRLPKKLP KVY ALNKPKGYICS+GEKE+KSVM LFD ++KSW
Sbjct: 212 VNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSW 258


>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Solanum lycopersicum]
          Length = 414

 Score =  256 bits (653), Expect = 9e-66
 Identities = 139/228 (60%), Positives = 156/228 (68%), Gaps = 10/228 (4%)
 Frame = +2

Query: 173 RTRPSFRIFSSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQPQS------GQLF 334
           RT  +  + SS T+FNITFA                 +  S+  +    +       QL+
Sbjct: 32  RTFITSSLSSSSTKFNITFAPPKPKPKTKPEPAIPIINPNSDSNSDSVPNLDAEVGDQLY 91

Query: 335 IPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXDAGA----QPKHSKAA 502
           IPWIVRDE GNLTLQS PPAR +  MA A                A      +PKHSKAA
Sbjct: 92  IPWIVRDEKGNLTLQSTPPARLLHEMANASTGKKKKKGKEVASKAATVVPTPEPKHSKAA 151

Query: 503 RRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDII 682
           RRFYNENFR+PPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVC TPQT+VDP RD+I
Sbjct: 152 RRFYNENFRDPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVI 211

Query: 683 YVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           YVNGNRLPKKLP KVY ALNKPKGYICS+GEKE+KSVM LFD ++KSW
Sbjct: 212 YVNGNRLPKKLPTKVYLALNKPKGYICSSGEKETKSVMSLFDDFIKSW 259


>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  249 bits (636), Expect = 9e-64
 Identities = 145/239 (60%), Positives = 157/239 (65%), Gaps = 18/239 (7%)
 Frame = +2

Query: 164 CFCRTRPSFRIF--SSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQP--QSG-- 325
           C  RT P  RI   SS  +FNI+FA                   P   +TQQ   +SG  
Sbjct: 26  CIHRTFPRSRITCSSSSLQFNISFAP------------------PKRKKTQQDDFESGEG 67

Query: 326 ---QLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXDAGAQ----- 481
              QLFIPWIVR E+GNL LQ+ PPAR V  +A A                A A      
Sbjct: 68  SEQQLFIPWIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGG 127

Query: 482 ----PKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTP 649
               PK SKAARRFYN+NFR+ P+RLSKVLAAAGVASRRSSEELIFQG+VTVNGSVCNTP
Sbjct: 128 PKAAPKLSKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTP 187

Query: 650 QTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           QTRVDP RDIIYVNG RLPKKLPPKVY ALNKPKGYICSAGEKE KSVM LFD Y+KSW
Sbjct: 188 QTRVDPARDIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSW 246


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
           gi|557538690|gb|ESR49734.1| hypothetical protein
           CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  249 bits (636), Expect = 9e-64
 Identities = 145/239 (60%), Positives = 157/239 (65%), Gaps = 18/239 (7%)
 Frame = +2

Query: 164 CFCRTRPSFRIF--SSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQP--QSG-- 325
           C  RT P  RI   SS  +FNI+FA                   P   +TQQ   +SG  
Sbjct: 76  CIHRTFPRSRITCSSSSLQFNISFAP------------------PKRKKTQQDDFESGEG 117

Query: 326 ---QLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXDAGAQ----- 481
              QLFIPWIVR E+GNL LQ+ PPAR V  +A A                A A      
Sbjct: 118 SEQQLFIPWIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGG 177

Query: 482 ----PKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTP 649
               PK SKAARRFYN+NFR+ P+RLSKVLAAAGVASRRSSEELIFQG+VTVNGSVCNTP
Sbjct: 178 PKAAPKLSKAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTP 237

Query: 650 QTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           QTRVDP RDIIYVNG RLPKKLPPKVY ALNKPKGYICSAGEKE KSVM LFD Y+KSW
Sbjct: 238 QTRVDPARDIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSW 296


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
           gi|550332354|gb|EEE89362.2| hypothetical protein
           POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  249 bits (635), Expect = 1e-63
 Identities = 142/235 (60%), Positives = 159/235 (67%), Gaps = 6/235 (2%)
 Frame = +2

Query: 140 SPSILTKACFCRTRPSFRIFSSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQPQ 319
           S S+L K+     RP+ RI +S  EFNITFA                A+L ++  +    
Sbjct: 21  SLSLLNKSI----RPT-RITAS-LEFNITFAPPKPKPKLP-------ANLQTDAASLSLP 67

Query: 320 SGQLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXDAG------AQ 481
            GQLFIPWIVR E+GNL LQS PPAR + A+A A                        A+
Sbjct: 68  PGQLFIPWIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDKVKKESSGNVKAKLEAE 127

Query: 482 PKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRV 661
           P  SKAARRFYNENFR+  QRLSKVLAAAGVASRRSSE LIF+G+VTVNGSVCNTPQTRV
Sbjct: 128 PTRSKAARRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRV 187

Query: 662 DPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           DPGRD IYVNGNRLPKKLPPK+Y ALNKPKGYICS GEKESKSVMCL D Y +SW
Sbjct: 188 DPGRDAIYVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSW 242


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
           PREDICTED: uncharacterized RNA pseudouridine synthase
           aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  249 bits (635), Expect = 1e-63
 Identities = 135/209 (64%), Positives = 145/209 (69%)
 Frame = +2

Query: 200 SSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQPQSGQLFIPWIVRDENGNLTLQ 379
           SS  EFNITFA                 D  S         GQLFIPWIVR E+GNL LQ
Sbjct: 45  SSSLEFNITFAPPKPKPKSEVEDPFQFIDRNS--------GGQLFIPWIVRGEDGNLKLQ 96

Query: 380 SQPPARFVQAMAFADXXXXXXXXXXXXXXDAGAQPKHSKAARRFYNENFREPPQRLSKVL 559
           S PP RF+ +++  +                   PKHSKAARRFYNEN RE  QRLSKVL
Sbjct: 97  SHPPTRFLHSVS--EDETKPKKKKVSAGKPITEPPKHSKAARRFYNENIRESSQRLSKVL 154

Query: 560 AAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFAL 739
           AAAGVASRRSSEELIF GRVTVNGSVCNTPQTRVDP RDIIYVNGNRLPKKLPPKVY AL
Sbjct: 155 AAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLAL 214

Query: 740 NKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           NKPKGYICS+G+KESKSV+ LFD Y+KSW
Sbjct: 215 NKPKGYICSSGKKESKSVISLFDDYLKSW 243


>gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus guttatus]
          Length = 409

 Score =  245 bits (625), Expect = 2e-62
 Identities = 138/248 (55%), Positives = 156/248 (62%), Gaps = 18/248 (7%)
 Frame = +2

Query: 137 FSPSILTKACFCRTRPSFRIF----------SSHTEFNITFAXXXXXXXXXXXXXXXXAD 286
           F+   L+K  F   R  FR            ++  EF ITFA                  
Sbjct: 11  FTTLHLSKTSFILPRRHFRTVITSSLSTTTTTAAAEFKITFAPPKPKP-----------Q 59

Query: 287 LPSEDQTQQP---QSGQLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXX 457
           L   D T  P      QL +PWI+RDENGN++LQ  PP RF++AMA              
Sbjct: 60  LQKSDPTNAPGIDSGDQLLVPWILRDENGNISLQKMPPQRFLKAMANESTQKKKKRDDKT 119

Query: 458 XXXDAGA-----QPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVT 622
               A A     +PK+SKAARRFYNE FREPPQRL+KVLA AGVASRRSSEELIFQG+VT
Sbjct: 120 PAKKAKAAMQYVEPKYSKAARRFYNERFREPPQRLAKVLATAGVASRRSSEELIFQGKVT 179

Query: 623 VNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCL 802
           VNGSVCNTPQTRVDP RDIIYVNG+RL KKLPPKVY ALNKPKGYICSAGE+E+KSV  L
Sbjct: 180 VNGSVCNTPQTRVDPARDIIYVNGSRLAKKLPPKVYLALNKPKGYICSAGEEETKSVFSL 239

Query: 803 FDAYMKSW 826
           FD +MK W
Sbjct: 240 FDDFMKGW 247


>ref|XP_006848911.1| hypothetical protein AMTR_s00161p00064200 [Amborella trichopoda]
           gi|548852364|gb|ERN10492.1| hypothetical protein
           AMTR_s00161p00064200 [Amborella trichopoda]
          Length = 403

 Score =  245 bits (625), Expect = 2e-62
 Identities = 132/221 (59%), Positives = 150/221 (67%), Gaps = 3/221 (1%)
 Frame = +2

Query: 173 RTRPSFRIFSSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQP-QSGQLFIPWIV 349
           R  P  +  S+ T+FNITF                 +      Q + P Q   LFIPWIV
Sbjct: 43  RNVPLIKASSASTQFNITFGARKKENPSPEMGEQDSSSSIKAPQKELPSQPAPLFIPWIV 102

Query: 350 RDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXDAG--AQPKHSKAARRFYNEN 523
           +DENGNL +QS PPA  + AMA A                    A+PKHSKAARRFYN+N
Sbjct: 103 KDENGNLKIQSTPPAHILSAMAEASTAKKTKKKKEGGSKSGSLSAEPKHSKAARRFYNQN 162

Query: 524 FREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRL 703
           FREP QRLSKVLA+AGVASRRSSEELIF G+VTVNGSVCN PQTRVDP +D+IYVNG+RL
Sbjct: 163 FREP-QRLSKVLASAGVASRRSSEELIFDGKVTVNGSVCNVPQTRVDPIKDVIYVNGSRL 221

Query: 704 PKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
            KKLPPK+YFALNKPKGYICS+ EKESKSV+ LFD Y KSW
Sbjct: 222 AKKLPPKLYFALNKPKGYICSSSEKESKSVLMLFDDYWKSW 262


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  242 bits (618), Expect = 1e-61
 Identities = 139/217 (64%), Positives = 147/217 (67%), Gaps = 8/217 (3%)
 Frame = +2

Query: 200 SSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQPQSG-----QLFIPWIVRDENG 364
           SS  EFNITFA                A  P  D    P S      QLFIPWIVR E+G
Sbjct: 35  SSSLEFNITFAP---------------APKPKPDPNSLPASSSSSGQQLFIPWIVRGEDG 79

Query: 365 NLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXDAG---AQPKHSKAARRFYNENFREP 535
            L LQS PPAR +  MA AD                    A+PKHSKAARRFYNENFRE 
Sbjct: 80  KLKLQSHPPARLLHEMAQADTKTKSKKNKDTAQKKQRVLTAEPKHSKAARRFYNENFRES 139

Query: 536 PQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPKKL 715
            QRLSKVLAAAGVASRRSSE+LIF G+VTVNGSVCNTPQT VDPGRDIIYVNGNRLPKKL
Sbjct: 140 -QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTPQTPVDPGRDIIYVNGNRLPKKL 198

Query: 716 PPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           PPKVY ALNKPKGYIC+AGEK  KSV+ LFD Y+KSW
Sbjct: 199 PPKVYLALNKPKGYICAAGEK--KSVLSLFDDYLKSW 233


>ref|XP_007009966.1| Pseudouridine synthase family protein isoform 4 [Theobroma cacao]
           gi|508726879|gb|EOY18776.1| Pseudouridine synthase
           family protein isoform 4 [Theobroma cacao]
          Length = 350

 Score =  241 bits (616), Expect = 2e-61
 Identities = 130/219 (59%), Positives = 146/219 (66%), Gaps = 10/219 (4%)
 Frame = +2

Query: 200 SSHTEFNITFAXXXXXXXXXXXXXXXX-ADLPSEDQTQQPQSGQLFIPWIVRDENGNLTL 376
           SS  +FNITFA                   L   +    P +GQLFIPWIVR E+GNL L
Sbjct: 74  SSSLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPPLPSNGQLFIPWIVRGEDGNLKL 133

Query: 377 QSQPPARFVQAMAFA---------DXXXXXXXXXXXXXXDAGAQPKHSKAARRFYNENFR 529
           Q+ PPAR + A+A A         D               +   PK SKAARRFYNENF 
Sbjct: 134 QAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLSKAARRFYNENFT 193

Query: 530 EPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPK 709
           EPPQRLSKVLAAAGVASRR SEELIF G+VTVNGSVCN PQTRVDP +DIIYVNG+RLPK
Sbjct: 194 EPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKDIIYVNGSRLPK 253

Query: 710 KLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           KLPPK+Y ALNKPKGYICS+GEKE KSV+ LF+ Y+K W
Sbjct: 254 KLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRW 292


>ref|XP_007009965.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
           gi|508726878|gb|EOY18775.1| Pseudouridine synthase
           family protein isoform 3 [Theobroma cacao]
          Length = 374

 Score =  241 bits (616), Expect = 2e-61
 Identities = 130/219 (59%), Positives = 146/219 (66%), Gaps = 10/219 (4%)
 Frame = +2

Query: 200 SSHTEFNITFAXXXXXXXXXXXXXXXX-ADLPSEDQTQQPQSGQLFIPWIVRDENGNLTL 376
           SS  +FNITFA                   L   +    P +GQLFIPWIVR E+GNL L
Sbjct: 74  SSSLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPPLPSNGQLFIPWIVRGEDGNLKL 133

Query: 377 QSQPPARFVQAMAFA---------DXXXXXXXXXXXXXXDAGAQPKHSKAARRFYNENFR 529
           Q+ PPAR + A+A A         D               +   PK SKAARRFYNENF 
Sbjct: 134 QAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLSKAARRFYNENFT 193

Query: 530 EPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPK 709
           EPPQRLSKVLAAAGVASRR SEELIF G+VTVNGSVCN PQTRVDP +DIIYVNG+RLPK
Sbjct: 194 EPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKDIIYVNGSRLPK 253

Query: 710 KLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           KLPPK+Y ALNKPKGYICS+GEKE KSV+ LF+ Y+K W
Sbjct: 254 KLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRW 292


>ref|XP_007009964.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
           cacao] gi|508726877|gb|EOY18774.1| Pseudouridine
           synthase family protein isoform 2, partial [Theobroma
           cacao]
          Length = 398

 Score =  241 bits (616), Expect = 2e-61
 Identities = 130/219 (59%), Positives = 146/219 (66%), Gaps = 10/219 (4%)
 Frame = +2

Query: 200 SSHTEFNITFAXXXXXXXXXXXXXXXX-ADLPSEDQTQQPQSGQLFIPWIVRDENGNLTL 376
           SS  +FNITFA                   L   +    P +GQLFIPWIVR E+GNL L
Sbjct: 25  SSSLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPPLPSNGQLFIPWIVRGEDGNLKL 84

Query: 377 QSQPPARFVQAMAFA---------DXXXXXXXXXXXXXXDAGAQPKHSKAARRFYNENFR 529
           Q+ PPAR + A+A A         D               +   PK SKAARRFYNENF 
Sbjct: 85  QAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLSKAARRFYNENFT 144

Query: 530 EPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPK 709
           EPPQRLSKVLAAAGVASRR SEELIF G+VTVNGSVCN PQTRVDP +DIIYVNG+RLPK
Sbjct: 145 EPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAKDIIYVNGSRLPK 204

Query: 710 KLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           KLPPK+Y ALNKPKGYICS+GEKE KSV+ LF+ Y+K W
Sbjct: 205 KLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRW 243


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  239 bits (610), Expect = 9e-61
 Identities = 137/248 (55%), Positives = 158/248 (63%), Gaps = 17/248 (6%)
 Frame = +2

Query: 134 HFSPSILTKACFCRTRPSFR---------IFSSHTEFNITFAXXXXXXXXXXXXXXXXAD 286
           H S S+L+ +     RPS R         + SS +EFNI+FA                 +
Sbjct: 14  HLSSSLLSLSSLS-LRPSIRHILPRVLCSLSSSTSEFNISFAPAKPKPQP---------E 63

Query: 287 LPSEDQTQQPQSGQLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXX 466
               D        QLFIPWI+R ++GNL LQS PPAR + AMA AD              
Sbjct: 64  ATEVDSLFGADGSQLFIPWIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKKPTAAEK 123

Query: 467 D--------AGAQPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVT 622
                    + A+PK+SKAARRFYNENFRE  QRLSKVLAAAGVASRR+SEELI +GRVT
Sbjct: 124 KKKNDKADKSVAEPKYSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRVT 183

Query: 623 VNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCL 802
           VNGSVCNTPQTRVDP +D+IYVNGNRLPK+LPPKVY ALNKPKGYICS G+K  KSVM L
Sbjct: 184 VNGSVCNTPQTRVDPAKDVIYVNGNRLPKRLPPKVYLALNKPKGYICSVGDK--KSVMSL 241

Query: 803 FDAYMKSW 826
           FD Y+K W
Sbjct: 242 FDDYLKIW 249


>ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
           gi|462414524|gb|EMJ19261.1| hypothetical protein
           PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score =  238 bits (607), Expect = 2e-60
 Identities = 128/209 (61%), Positives = 148/209 (70%)
 Frame = +2

Query: 200 SSHTEFNITFAXXXXXXXXXXXXXXXXADLPSEDQTQQPQSGQLFIPWIVRDENGNLTLQ 379
           SS  EFNITFA                    S +   +  +GQL IPWIVR E+GNL LQ
Sbjct: 43  SSSLEFNITFAPSKPKPKLKPD---------SAEPDPEALAGQLIIPWIVRGEDGNLKLQ 93

Query: 380 SQPPARFVQAMAFADXXXXXXXXXXXXXXDAGAQPKHSKAARRFYNENFREPPQRLSKVL 559
           S PPARF+QA+                   A  +PK+SKAARRFYNENFR+  QRLSKVL
Sbjct: 94  SHPPARFLQAIETKSKTKKKKEGAEKRVPTA--EPKYSKAARRFYNENFRDASQRLSKVL 151

Query: 560 AAAGVASRRSSEELIFQGRVTVNGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFAL 739
           AAAGVASRRSSE+LIF G+VTVNGSVCNTPQ+RVDPGRDIIYVNGNRLPK+LPPKVY AL
Sbjct: 152 AAAGVASRRSSEQLIFDGKVTVNGSVCNTPQSRVDPGRDIIYVNGNRLPKRLPPKVYLAL 211

Query: 740 NKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           NKPKGYIC++G  E+KSV+ LF+ Y+K+W
Sbjct: 212 NKPKGYICASG--ENKSVLSLFEDYLKTW 238


>ref|XP_007009963.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508726876|gb|EOY18773.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 453

 Score =  235 bits (599), Expect = 2e-59
 Identities = 130/225 (57%), Positives = 146/225 (64%), Gaps = 16/225 (7%)
 Frame = +2

Query: 200 SSHTEFNITFAXXXXXXXXXXXXXXXX-ADLPSEDQTQQPQSGQLFIPWIVRDENGNLTL 376
           SS  +FNITFA                   L   +    P +GQLFIPWIVR E+GNL L
Sbjct: 74  SSSLQFNITFAPPNPKLKPRTPPNLKNDVVLDDSESPPLPSNGQLFIPWIVRGEDGNLKL 133

Query: 377 QSQPPARFVQAMAFA---------DXXXXXXXXXXXXXXDAGAQPKHSKAARRFYNENFR 529
           Q+ PPAR + A+A A         D               +   PK SKAARRFYNENF 
Sbjct: 134 QAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLSKAARRFYNENFT 193

Query: 530 EPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTPQ------TRVDPGRDIIYVN 691
           EPPQRLSKVLAAAGVASRR SEELIF G+VTVNGSVCN PQ      TRVDP +DIIYVN
Sbjct: 194 EPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQASDNLQTRVDPAKDIIYVN 253

Query: 692 GNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           G+RLPKKLPPK+Y ALNKPKGYICS+GEKE KSV+ LF+ Y+K W
Sbjct: 254 GSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRW 298


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
           gi|482562896|gb|EOA27086.1| hypothetical protein
           CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  233 bits (595), Expect = 5e-59
 Identities = 121/187 (64%), Positives = 133/187 (71%), Gaps = 20/187 (10%)
 Frame = +2

Query: 326 QLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXDAGAQ-------- 481
           QLFIPWIVR ++G L LQSQPPAR + ++A                    A         
Sbjct: 115 QLFIPWIVRGDDGTLKLQSQPPARLIHSLAIDATTQNPKKKEKSKKKQTQATSSSATASS 174

Query: 482 ------------PKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTV 625
                       PK SKAARRFYNENF+EPPQRLSKVLAAAGVASRR+SEELIF G+VTV
Sbjct: 175 SASASSPPPQSVPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTV 234

Query: 626 NGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLF 805
           NG +CNTPQTRVDP RDIIYVNGNR+PKKLPPKVYFALNKPKGYICS+GEKE KSV+ LF
Sbjct: 235 NGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLF 294

Query: 806 DAYMKSW 826
           D YM SW
Sbjct: 295 DEYMASW 301


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 412

 Score =  233 bits (594), Expect = 7e-59
 Identities = 122/187 (65%), Positives = 135/187 (72%), Gaps = 20/187 (10%)
 Frame = +2

Query: 326 QLFIPWIVRDENGNLTLQSQPPARFVQAMAF---------ADXXXXXXXXXXXXXXDAGA 478
           QLFIPWIVR ++G L LQSQPPAR +  +A           D               A A
Sbjct: 71  QLFIPWIVRGDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATA 130

Query: 479 -----------QPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTV 625
                      +PK SKAARRFYNENF+EPPQRLSKVLAAAGVASRR+SEELIF G+VTV
Sbjct: 131 SASSPASHSEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTV 190

Query: 626 NGSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLF 805
           NG +CNTPQTRVDP RDIIYVNGNR+PKKLPPKVYFALNKPKGYICS+GEKE KSV+ LF
Sbjct: 191 NGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLF 250

Query: 806 DAYMKSW 826
           D Y+ SW
Sbjct: 251 DEYLSSW 257


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
           gi|557112308|gb|ESQ52592.1| hypothetical protein
           EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score =  229 bits (585), Expect = 7e-58
 Identities = 117/179 (65%), Positives = 134/179 (74%), Gaps = 12/179 (6%)
 Frame = +2

Query: 326 QLFIPWIVRDENGNLTLQSQPPARFVQAMAFADXXXXXXXXXXXXXXD------------ 469
           QLFIPWIVR E+G L +QSQPPAR + A+A A                            
Sbjct: 70  QLFIPWIVRGEDGKLKVQSQPPARLIHALADATTQNPKKKDKSKKKKPQSTSASTPSSPA 129

Query: 470 AGAQPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVNGSVCNTP 649
           + ++PK SKAARRFYNENF++PPQRLSKVLAAAGVASRR+SEELIF G+VTVNGS+C  P
Sbjct: 130 SHSKPKLSKAARRFYNENFKDPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGSLCTAP 189

Query: 650 QTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFDAYMKSW 826
           Q RVDP RDIIYVNGNR+PKKLPPKVYFALNKPKGYICS+GEKE KSV+ LFD ++ SW
Sbjct: 190 QIRVDPTRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDDFLASW 248


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
           gi|21617894|gb|AAM66944.1| unknown [Arabidopsis
           thaliana] gi|26450440|dbj|BAC42334.1| unknown protein
           [Arabidopsis thaliana] gi|330254545|gb|AEC09639.1|
           pseudouridine synthase family protein [Arabidopsis
           thaliana]
          Length = 410

 Score =  229 bits (585), Expect = 7e-58
 Identities = 118/186 (63%), Positives = 132/186 (70%), Gaps = 19/186 (10%)
 Frame = +2

Query: 326 QLFIPWIVRDENGNLTLQSQPPARFVQAMAF-------------------ADXXXXXXXX 448
           QLFIPWIVR ++G L LQSQPPAR +  +A                    A         
Sbjct: 70  QLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTT 129

Query: 449 XXXXXXDAGAQPKHSKAARRFYNENFREPPQRLSKVLAAAGVASRRSSEELIFQGRVTVN 628
                  +  +PK SKAARRFYNENF+E PQRLSKVLAAAGVASRR+SEELIF G+VTVN
Sbjct: 130 ASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVN 189

Query: 629 GSVCNTPQTRVDPGRDIIYVNGNRLPKKLPPKVYFALNKPKGYICSAGEKESKSVMCLFD 808
           G +CNTPQTRVDP RDIIYVNGNR+PKKLPPKVYFALNKPKGYICS+GEKE KS + LFD
Sbjct: 190 GILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSAISLFD 249

Query: 809 AYMKSW 826
            Y+ SW
Sbjct: 250 EYLSSW 255