BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00018444
         (1303 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like...   441   e-121
ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...   436   e-119
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr...   436   e-119
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   431   e-118
ref|XP_007031141.1| Pseudouridine synthase family protein isofor...   426   e-116
ref|XP_007031140.1| Pseudouridine synthase family protein isofor...   426   e-116
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [...   422   e-115
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]           412   e-112
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]           408   e-111
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   407   e-111
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like...   404   e-110
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [...   403   e-109
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   400   e-109
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   400   e-109
emb|CBI39587.3| unnamed protein product [Vitis vinifera]              389   e-105
gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus...   369   1e-99
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr...   368   4e-99
ref|XP_006302538.1| hypothetical protein CARUB_v10020638mg [Caps...   365   3e-98
ref|XP_002894642.1| pseudouridine synthase family protein [Arabi...   361   4e-97
dbj|BAK01967.1| predicted protein [Hordeum vulgare subsp. vulgare]    360   6e-97

>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
          Length = 324

 Score =  441 bits (1134), Expect = e-121
 Identities = 225/324 (69%), Positives = 263/324 (81%), Gaps = 1/324 (0%)
 Frame = +3

Query: 105  SDSSSTKDLNTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLI 284
            ++ +S     T  NY            K IEL+RAMSASS+S LY LSRSDVL+EDEWL+
Sbjct: 5    TEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLV 64

Query: 285  VVNKPQGVYCERVLASVPSIL-NDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSG 461
             VNKPQGVYCE VLASVP +L  DSA+S     ++G    T+ +L ELHLANRLDRDTSG
Sbjct: 65   AVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEG----TKLNLLELHLANRLDRDTSG 120

Query: 462  VMVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAA 641
            VMVITKS+KVA+KLVKAFT+HKV+KTYIALCIGPAPKW++ITI SGHGRSK+GAWRVYAA
Sbjct: 121  VMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAA 180

Query: 642  SDVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKK 821
            SDVGR LPGGSVVRDM T FEVLSVNG+GSFK+ S+ ++D++NN I+VE+K+V ++D KK
Sbjct: 181  SDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENN-IVVEKKAVLDADAKK 239

Query: 822  DEVLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHP 1001
            +E+LVR FPRSGRTHQIRLHCQYLGI IRGDVKYEGVYEW GK +DGHELHAESLSL HP
Sbjct: 240  NEILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHP 299

Query: 1002 VTDLPVVFWAPLPLWASQVLQRIS 1073
            +T  PV+  APLPLWA+Q  Q  S
Sbjct: 300  ITGCPVMVQAPLPLWATQAPQSSS 323


>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
            gi|462401230|gb|EMJ06787.1| hypothetical protein
            PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  436 bits (1121), Expect = e-119
 Identities = 218/317 (68%), Positives = 256/317 (80%)
 Frame = +3

Query: 114  SSTKDLNTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVN 293
            SS   L T  NY            K IEL+RAMSASS+S L++LSR DV+FED+WLIVVN
Sbjct: 11   SSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVN 70

Query: 294  KPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVI 473
            KPQGVYCE VL SVP +L DSA+S            T ++  ELHLANRLDRDTSG+MVI
Sbjct: 71   KPQGVYCESVLESVPQLLCDSAES-----------GTPANQLELHLANRLDRDTSGLMVI 119

Query: 474  TKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVG 653
            TKS+KVA+KLVKAFT+HK++KTYIA CIG APKWE+IT+ SGHGRSK+GAWRVYAASDVG
Sbjct: 120  TKSHKVASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVG 179

Query: 654  RALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVL 833
            R LPGGS+VRDMET FEVLS+NG+GS K+ S+ +KD+  N+I+V+EK+V + D KKDE+L
Sbjct: 180  RTLPGGSMVRDMETSFEVLSINGQGSLKEPSEFKKDEA-NTIVVQEKAVIDKDTKKDEIL 238

Query: 834  VRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDL 1013
            VRA PRSGRTHQIRLHCQYLGI IRGDVKYEGVYEW+G+T+DGHELHAESLS  HP+T L
Sbjct: 239  VRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGL 298

Query: 1014 PVVFWAPLPLWASQVLQ 1064
            PV+F AP+P WASQ LQ
Sbjct: 299  PVMFQAPVPSWASQALQ 315


>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
            gi|567881937|ref|XP_006433527.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
            gi|557535648|gb|ESR46766.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
            gi|557535649|gb|ESR46767.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
          Length = 357

 Score =  436 bits (1120), Expect = e-119
 Identities = 221/311 (71%), Positives = 256/311 (82%), Gaps = 1/311 (0%)
 Frame = +3

Query: 144  NYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERV 323
            NY            K IEL+RAMSASS+S LY LSRSDVL+EDEW + VNKPQGVYCE V
Sbjct: 51   NYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWFVAVNKPQGVYCESV 110

Query: 324  LASVPSIL-NDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAK 500
            LASVP  L  DSA+S     ++G    T+ +L ELHLANRLDRDTSGVMVITKS+KVA+K
Sbjct: 111  LASVPCFLAGDSAESKSGRLSEG----TKLNLLELHLANRLDRDTSGVMVITKSHKVASK 166

Query: 501  LVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVV 680
            LVKAFT+HKV+KTYIALCIGPAPKW++ITI SGHGRSK+GAWRVYAASDVGR LPGGSVV
Sbjct: 167  LVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVV 226

Query: 681  RDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGR 860
            RDM T FEVLSVNG+GSFK+ S+ ++ ++NN I+VE+K+V ++D KK+E+LVRAFPRSGR
Sbjct: 227  RDMVTSFEVLSVNGEGSFKEPSELQEHEENN-IVVEKKAVLDADAKKNEILVRAFPRSGR 285

Query: 861  THQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLP 1040
            THQIRLHCQYLGI IRGDVKYEGVYEW GK +DGHELHAESLS +HPVT  PV+  APLP
Sbjct: 286  THQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAPLP 345

Query: 1041 LWASQVLQRIS 1073
            LW ++ LQ  S
Sbjct: 346  LWGTEALQSSS 356


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 321

 Score =  431 bits (1108), Expect = e-118
 Identities = 219/318 (68%), Positives = 254/318 (79%), Gaps = 1/318 (0%)
 Frame = +3

Query: 114  SSTKDLNTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVN 293
            +S  D  TL NY            KQIEL+RA+SASSRS L+TLSRSDVL+ED+WLI VN
Sbjct: 11   TSQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVN 70

Query: 294  KPQGVYCERVLASVPSILNDSAD-SDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMV 470
            KPQGVYCE VL SVP +L  SA+ +D    A+G+         E HLANRLDRDTSGVMV
Sbjct: 71   KPQGVYCETVLESVPRVLAASAELTDPSEGAEGNPH-------EFHLANRLDRDTSGVMV 123

Query: 471  ITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDV 650
            ITKS+KVA+KLVKAFT+HK+ KTYIALCIG APKWEKITI SGHGRSK+G WRVYAASDV
Sbjct: 124  ITKSHKVASKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDV 183

Query: 651  GRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEV 830
            G+ LPGGS V+DMET FE+LSVNG+GSFK++S+  KD+  N ++VEEK+  N+DVKK E+
Sbjct: 184  GQTLPGGSTVKDMETSFELLSVNGQGSFKELSEFEKDE--NILVVEEKAAKNADVKKVEI 241

Query: 831  LVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTD 1010
            LVRAFP+SGRTHQIRLHCQYLGI IRGDVKYEGVYEWEG+T+DGHELHAE+LS  HPVT 
Sbjct: 242  LVRAFPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTG 301

Query: 1011 LPVVFWAPLPLWASQVLQ 1064
            +PV+  APLP WA Q  Q
Sbjct: 302  VPVMLRAPLPSWAIQASQ 319


>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719746|gb|EOY11643.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 313

 Score =  426 bits (1094), Expect = e-116
 Identities = 212/314 (67%), Positives = 252/314 (80%)
 Frame = +3

Query: 132  NTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVY 311
            N+  NY            K IEL+RAM+ASS+S L+ LSRSD+L+EDEWLI VNKPQG+Y
Sbjct: 6    NSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIY 65

Query: 312  CERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKV 491
            C+ VLAS+P  L+DS  SDR ++ +      Q+S  ELHLANRLDRDTSG+MVITKS+KV
Sbjct: 66   CDSVLASIPRFLSDSTVSDRLSDGN------QASPFELHLANRLDRDTSGIMVITKSHKV 119

Query: 492  AAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGG 671
            AA LVKAFTNH V+KTY+A CIG APK E+ITI SGHGRSK+GAWRVYAA DVGR LPGG
Sbjct: 120  AAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGG 179

Query: 672  SVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPR 851
            S+VRDM T FEVLS+NG+ S+K+ S+  KD++  S+IVEEK+V + D +KDE+LVRAFPR
Sbjct: 180  SIVRDMGTTFEVLSINGQQSYKEPSESVKDEE-TSVIVEEKAVIDVDAQKDEILVRAFPR 238

Query: 852  SGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWA 1031
            SGRTHQIRLHCQYLGIPIRGDVKYEGVYEW+G+ +D HELHAESLS  HPVT  PV+  A
Sbjct: 239  SGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQA 298

Query: 1032 PLPLWASQVLQRIS 1073
            PLPLWASQ LQ ++
Sbjct: 299  PLPLWASQALQPLT 312


>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508719745|gb|EOY11642.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 345

 Score =  426 bits (1094), Expect = e-116
 Identities = 212/314 (67%), Positives = 252/314 (80%)
 Frame = +3

Query: 132  NTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVY 311
            N+  NY            K IEL+RAM+ASS+S L+ LSRSD+L+EDEWLI VNKPQG+Y
Sbjct: 38   NSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIY 97

Query: 312  CERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKV 491
            C+ VLAS+P  L+DS  SDR ++ +      Q+S  ELHLANRLDRDTSG+MVITKS+KV
Sbjct: 98   CDSVLASIPRFLSDSTVSDRLSDGN------QASPFELHLANRLDRDTSGIMVITKSHKV 151

Query: 492  AAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGG 671
            AA LVKAFTNH V+KTY+A CIG APK E+ITI SGHGRSK+GAWRVYAA DVGR LPGG
Sbjct: 152  AAALVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGG 211

Query: 672  SVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPR 851
            S+VRDM T FEVLS+NG+ S+K+ S+  KD++  S+IVEEK+V + D +KDE+LVRAFPR
Sbjct: 212  SIVRDMGTTFEVLSINGQQSYKEPSESVKDEE-TSVIVEEKAVIDVDAQKDEILVRAFPR 270

Query: 852  SGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWA 1031
            SGRTHQIRLHCQYLGIPIRGDVKYEGVYEW+G+ +D HELHAESLS  HPVT  PV+  A
Sbjct: 271  SGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQA 330

Query: 1032 PLPLWASQVLQRIS 1073
            PLPLWASQ LQ ++
Sbjct: 331  PLPLWASQALQPLT 344


>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 347

 Score =  422 bits (1084), Expect = e-115
 Identities = 213/355 (60%), Positives = 260/355 (73%), Gaps = 3/355 (0%)
 Frame = +3

Query: 9    SLFSVKPISTTVRY---VCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYXXXXXXXXXX 179
            SL  ++P++  V +      SFP P       T     SS   L    NY          
Sbjct: 3    SLLVLQPVNVFVFFNPKTLTSFPKPFNFLRSVTMSDQPSSQNALQISQNYPVPLSPPLPL 62

Query: 180  XXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSA 359
              K +EL+RAMSASS+S L+TLSR+DV++ED+WLIVVNKPQG+YCE VL SVP +L +S 
Sbjct: 63   ISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETVLESVPKLLAESG 122

Query: 360  DSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKT 539
                           +   PE+HLANRLDRDTSGVM+ITKS+KVAAKLVKAFT+HKV+KT
Sbjct: 123  --------------LEGKAPEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFTDHKVSKT 168

Query: 540  YIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVN 719
            YIA CIG APKWE+IT+ SGHGRSK+GAWRVYAASDVGR LPGGSVVRDMET FE+LS+N
Sbjct: 169  YIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETSFEILSIN 228

Query: 720  GKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGI 899
            G+G F++ S+ R DD    ++ E+  + + D KKDE+LV A PRSGRTHQIRLHCQYLGI
Sbjct: 229  GQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVIARPRSGRTHQIRLHCQYLGI 288

Query: 900  PIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQ 1064
             IRGDVKYEGVYEW+G T+ GHELHAES+SL+HP+T LP++F APLP WA+Q++Q
Sbjct: 289  SIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILFRAPLPSWANQLIQ 343


>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  412 bits (1058), Expect = e-112
 Identities = 207/318 (65%), Positives = 249/318 (78%)
 Frame = +3

Query: 114  SSTKDLNTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVN 293
            +S   L T  NY            K +ELSRAMSASS+S L+++SR+D +FEDE L+ VN
Sbjct: 11   TSQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVN 70

Query: 294  KPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVI 473
            KPQG+YCE V  SV  +L+DS++  +          T++S PELHLANRLDRDTSG+M+I
Sbjct: 71   KPQGIYCESVFDSVRKVLSDSSEPGQLE--------TEASPPELHLANRLDRDTSGLMLI 122

Query: 474  TKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVG 653
            TKS+KVA+KLVKAFT HKV+KTYIA C+G APKWE ITI SGHGRSK+GAWRVYAASDVG
Sbjct: 123  TKSHKVASKLVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVG 182

Query: 654  RALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVL 833
            R LPGGSVVRDMET FEVLSVNG+   K+ S+ RKD  NN +IVEEK++ + D KKDE+L
Sbjct: 183  RTLPGGSVVRDMETSFEVLSVNGQRVSKEPSEFRKDG-NNVLIVEEKALIDRDGKKDEIL 241

Query: 834  VRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDL 1013
            VRA P+SGR+HQIRLHCQYLGI +RGDVKYEGV +W+GKT++GHELHAESLS  HP+T L
Sbjct: 242  VRARPKSGRSHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSL 301

Query: 1014 PVVFWAPLPLWASQVLQR 1067
            PVV   PLP+WASQV Q+
Sbjct: 302  PVVLSTPLPMWASQVTQQ 319


>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  408 bits (1048), Expect = e-111
 Identities = 206/318 (64%), Positives = 248/318 (77%)
 Frame = +3

Query: 114  SSTKDLNTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVN 293
            +S   L T  NY            K +ELSRAMSASS+S L+++SR+D +FEDE L+ VN
Sbjct: 11   TSQNALRTPQNYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVN 70

Query: 294  KPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVI 473
            KPQG+YCE V  SV  +L+DS++  +          T++S PELHLANRLDRDTSG+M+I
Sbjct: 71   KPQGIYCESVFDSVRKVLSDSSEPGQLE--------TEASPPELHLANRLDRDTSGLMLI 122

Query: 474  TKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVG 653
            TKS+KVA+KLVKAFT HKV+KTYIA C+G APKWE ITI SGHGRSK+GAWRVYAASDVG
Sbjct: 123  TKSHKVASKLVKAFTTHKVSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVG 182

Query: 654  RALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVL 833
            R LPGGSVVRDMET FEVLSVNG+   K+ S+ RKD  NN +IVEEK++ + D KKDE+L
Sbjct: 183  RTLPGGSVVRDMETSFEVLSVNGQRVSKEPSEFRKDG-NNVLIVEEKALIDRDGKKDEIL 241

Query: 834  VRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDL 1013
            VRA P+SGR+HQIRLHCQYLGI +RGDVKYEGV +W+GKT++GHELHAESLS  HP+T L
Sbjct: 242  VRARPKSGRSHQIRLHCQYLGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSL 301

Query: 1014 PVVFWAPLPLWASQVLQR 1067
             VV   PLP+WASQV Q+
Sbjct: 302  LVVLSTPLPMWASQVTQQ 319


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  407 bits (1045), Expect = e-111
 Identities = 214/349 (61%), Positives = 254/349 (72%)
 Frame = +3

Query: 30   ISTTVRYVCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYXXXXXXXXXXXXKQIELSRA 209
            I+  VR +  S P  TM++       D +S      LTNY            K IE SRA
Sbjct: 20   ITAAVRSLGASLPHTTMAE-----YIDPNSKDAPQILTNYPKPISPPLPAISKHIEQSRA 74

Query: 210  MSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADSDRRNEADG 389
            MSASSRS L++L RSD+LFED+WL+ VNKPQGVYCE +L SV  +L+DS         DG
Sbjct: 75   MSASSRSSLFSLCRSDILFEDQWLMAVNKPQGVYCETILLSVSRMLDDS---------DG 125

Query: 390  HSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAP 569
            H      S   LHLANRLDRDTSGVMVITKS++VAAKL+KAF++ KV KTY+ALCIG AP
Sbjct: 126  HD-----SCRSLHLANRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYLALCIGAAP 180

Query: 570  KWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSD 749
             WEKITI SGHGRSK+GAWRVYAASDVGRALP    ++DM T FEVLSVNG+G+ K++ +
Sbjct: 181  TWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAIKDMVTSFEVLSVNGQGNVKELPE 240

Query: 750  PRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEG 929
             RK D+   ++VEE+SV +S+ ++DE+LVRAFPRSGRTHQIRLHCQYLGI IRGDVKYEG
Sbjct: 241  SRKADE-TVLVVEERSVIDSNARQDEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEG 299

Query: 930  VYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQRISH 1076
            V+EW+GK +DGHELHAESLS  HPVT + V F APLP WA Q LQ   H
Sbjct: 300  VHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPSWAVQALQPSPH 348


>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
          Length = 332

 Score =  404 bits (1039), Expect = e-110
 Identities = 200/305 (65%), Positives = 237/305 (77%)
 Frame = +3

Query: 141  TNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCER 320
            T+Y            K IE +RA++ASS+S L++LSRS V+FEDEW+I VNKPQG+YCE 
Sbjct: 45   TDYPVPLSPPLPALSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCES 104

Query: 321  VLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAK 500
            VL+S+P +LND                T +++ ELHLANRLDRDTSGVM+ITK +KVAAK
Sbjct: 105  VLSSLPDLLND----------------TGANVSELHLANRLDRDTSGVMLITKLHKVAAK 148

Query: 501  LVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVV 680
             VKAFT+HKV KTY+A C+G APKWEKIT+ SGHGRSKYGAWRVYAASD GR LPGGS+V
Sbjct: 149  FVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLV 208

Query: 681  RDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGR 860
            +DMET FEVLSVNG G FK+VSD  KD+  + +IV+EKSV   D+KKDE+LVRA PRSGR
Sbjct: 209  KDMETSFEVLSVNGLGCFKEVSDFHKDE--DVVIVQEKSVIGCDLKKDEILVRASPRSGR 266

Query: 861  THQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLP 1040
            THQIRLHCQYLGIPIRGDV+YEGVYEW+G  +D HELHAESLS  HP+T  P++  APLP
Sbjct: 267  THQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDSHELHAESLSFEHPITGKPMLLQAPLP 326

Query: 1041 LWASQ 1055
             WA Q
Sbjct: 327  SWAIQ 331


>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
          Length = 308

 Score =  403 bits (1035), Expect = e-109
 Identities = 200/308 (64%), Positives = 238/308 (77%)
 Frame = +3

Query: 141  TNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCER 320
            T+Y            K IE +RA++ASS+S L++LSRS V+FEDEW+I VNKPQG+YCE 
Sbjct: 15   TDYPVPLSPPLPTLSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCES 74

Query: 321  VLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAK 500
            VL+S+P +LND                T +++ ELHLANRLDRDTSGVM+ITK +KVAAK
Sbjct: 75   VLSSLPDLLND----------------TGANVSELHLANRLDRDTSGVMLITKLHKVAAK 118

Query: 501  LVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVV 680
             VKAFT+HKV KTY+A C+G APKWEKIT+ SGHGRSKYGAWRVYAASD GR LPGGS+V
Sbjct: 119  FVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAGRKLPGGSLV 178

Query: 681  RDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGR 860
            +DMET FEVLSVNG G FK+VSD  KD+  + +IV+EKSV   D+KKDE+LVRA PRSGR
Sbjct: 179  KDMETSFEVLSVNGLGCFKEVSDLHKDE--DIVIVQEKSVIGCDLKKDEILVRASPRSGR 236

Query: 861  THQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLP 1040
            THQIRLHCQYLGIPIRGDV+YEGVYEW+G  +D HELHAESLS  HP+T   ++  APLP
Sbjct: 237  THQIRLHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPITGKSMLLQAPLP 296

Query: 1041 LWASQVLQ 1064
             WA Q L+
Sbjct: 297  SWAIQPLR 304


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  400 bits (1029), Expect = e-109
 Identities = 205/357 (57%), Positives = 256/357 (71%)
 Frame = +3

Query: 6    PSLFSVKPISTTVRYVCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYXXXXXXXXXXXX 185
            P  F+  P + +  +  +     +M+DS +    +  ST +     NY            
Sbjct: 15   PKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAE-----NYPVPLSPPLPAIS 69

Query: 186  KQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADS 365
            K +EL+RAM ASS+S LY LS +DV++EDEWLI VNKPQG+YCE VLA+VP +L DSA++
Sbjct: 70   KNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDSANA 129

Query: 366  DRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYI 545
                         ++SLPELHLANRLDRDTSGVMVITKS+KVA+KLVKAFT+H V+K+YI
Sbjct: 130  -----------GIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYI 178

Query: 546  ALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGK 725
            A C+G +PKW+KI + SGHGRSK+G WRVYAA+DVGR+LPGGSVVRDMET FEVLSVNGK
Sbjct: 179  AFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGK 238

Query: 726  GSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPI 905
             + +++   R+ ++  +I+V  KS+ + D  KDE+L+RA PRSGRTHQIRLHCQYLGIPI
Sbjct: 239  NTMEELQKFRRGEE-ETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPI 297

Query: 906  RGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQRISH 1076
            RGDVKYEGV EW  K +D HELHAESL   HPVT +P+   APLP WASQ LQ   H
Sbjct: 298  RGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQH 354


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
            [Cucumis sativus]
          Length = 366

 Score =  400 bits (1027), Expect = e-109
 Identities = 205/357 (57%), Positives = 255/357 (71%)
 Frame = +3

Query: 6    PSLFSVKPISTTVRYVCYSFPLPTMSDSDQTHLSDSSSTKDLNTLTNYXXXXXXXXXXXX 185
            P  F+  P + +  +  +     +M+DS +    +  ST +     NY            
Sbjct: 15   PKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAE-----NYPVPLSPPLPAIS 69

Query: 186  KQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADS 365
            K +EL+RAM ASS+S LY LS +DV++EDEWLI VNKPQG+YCE VLA+VP +L DSA++
Sbjct: 70   KNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDSANA 129

Query: 366  DRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYI 545
                         ++SLPELHLANRLDRDTSGVMVITKS+KVA+KLVKAFT+H V+K+YI
Sbjct: 130  -----------GIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYI 178

Query: 546  ALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGK 725
            A C+G +PKW KI + SGHGRSK+G WRVYAA+DVGR+LPGGSVVRDMET FEVLSVNGK
Sbjct: 179  AFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGK 238

Query: 726  GSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPI 905
             + +++   R+ ++  +I+V  KS+ + D  KDE+L+RA PRSGRTHQIRLHCQYLGIPI
Sbjct: 239  NTMEELQKFRRGEE-ETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQYLGIPI 297

Query: 906  RGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQRISH 1076
            RGDVKYEGV EW  K +D HELHAESL   HPVT +P+   APLP WASQ LQ   H
Sbjct: 298  RGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQH 354


>emb|CBI39587.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  389 bits (999), Expect = e-105
 Identities = 195/289 (67%), Positives = 230/289 (79%)
 Frame = +3

Query: 210  MSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADSDRRNEADG 389
            MSASSRS L++L RSD+LFED+WL+ VNKPQGVYCE +L SV  +L+DS         DG
Sbjct: 1    MSASSRSSLFSLCRSDILFEDQWLMAVNKPQGVYCETILLSVSRMLDDS---------DG 51

Query: 390  HSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAP 569
            H      S   LHLANRLDRDTSGVMVITKS++VAAKL+KAF++ KV KTY+ALCIG AP
Sbjct: 52   HD-----SCRSLHLANRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYLALCIGAAP 106

Query: 570  KWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSD 749
             WEKITI SGHGRSK+GAWRVYAASDVGRALP    ++DM T FEVLSVNG+G+ K++ +
Sbjct: 107  TWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAIKDMVTSFEVLSVNGQGNVKELPE 166

Query: 750  PRKDDKNNSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEG 929
             RK D+   ++VEE+SV +S+ ++DE+LVRAFPRSGRTHQIRLHCQYLGI IRGDVKYEG
Sbjct: 167  SRKADE-TVLVVEERSVIDSNARQDEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEG 225

Query: 930  VYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVLQRISH 1076
            V+EW+GK +DGHELHAESLS  HPVT + V F APLP WA Q LQ   H
Sbjct: 226  VHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPSWAVQALQPSPH 274


>gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus guttatus]
          Length = 323

 Score =  369 bits (948), Expect = 1e-99
 Identities = 188/311 (60%), Positives = 225/311 (72%), Gaps = 2/311 (0%)
 Frame = +3

Query: 135  TLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYC 314
            +L NY            K +EL+RA++ASS+S L++LSR DVLFEDEWLI VNKP G+YC
Sbjct: 20   SLQNYPVPLSPPPPLISKNVELNRALTASSKSSLFSLSRKDVLFEDEWLIAVNKPNGIYC 79

Query: 315  ERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVA 494
            E +L+SV  +LN                  Q  L ELHL+NRLDRDTSGV++ITKS+KVA
Sbjct: 80   ETILSSVQILLNTD----------------QVKLQELHLSNRLDRDTSGVILITKSHKVA 123

Query: 495  AKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGS 674
            AKLVKAFTNH V KTY+A C+G  PKW+ + I SGHGRSK+GAWRVYA SDVGR LPGGS
Sbjct: 124  AKLVKAFTNHMVKKTYLASCVGTFPKWKNMIIKSGHGRSKHGAWRVYAYSDVGRVLPGGS 183

Query: 675  VVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNS--DVKKDEVLVRAFP 848
             VRDMET F+VLSVNGK S  + SD   +++   +  E+  V  S    ++DEV+VRA P
Sbjct: 184  FVRDMETSFDVLSVNGK-SCSQESDANHEEEEKIVAEEKSEVVGSCCSDERDEVVVRAHP 242

Query: 849  RSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFW 1028
            RSGRTHQIRLHCQYLGIPI GDVKYEGVYEW+ +T++GHELHAE+LS  HP+T   V   
Sbjct: 243  RSGRTHQIRLHCQYLGIPIIGDVKYEGVYEWKDRTYEGHELHAETLSFEHPITGQSVFIQ 302

Query: 1029 APLPLWASQVL 1061
            APLPLWASQ L
Sbjct: 303  APLPLWASQAL 313


>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
            gi|557088941|gb|ESQ29721.1| hypothetical protein
            EUTSA_v10023586mg [Eutrema salsugineum]
          Length = 333

 Score =  368 bits (944), Expect = 4e-99
 Identities = 191/316 (60%), Positives = 228/316 (72%)
 Frame = +3

Query: 105  SDSSSTKDLNTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLI 284
            +D  +T D N   NY            K IEL RAM ASS+S L+ L+R+DVL+EDEWL+
Sbjct: 37   NDLPTTVDTNQ--NYPKPISAPPPPISKDIELKRAMEASSKSSLFNLTRNDVLYEDEWLM 94

Query: 285  VVNKPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGV 464
             VNKP+G+YCE VL+S P ++ DS+                S+  E HLANRLDRDTSGV
Sbjct: 95   AVNKPKGIYCESVLSSAPKVIVDSS----------------STANEFHLANRLDRDTSGV 138

Query: 465  MVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAAS 644
            M+ITKS+KVAAKLVKAFT HK+ K+YIALCIG +P W KIT+ SGHGRSK+GAWRVYAA 
Sbjct: 139  MLITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKITVRSGHGRSKHGAWRVYAAL 198

Query: 645  DVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKNNSIIVEEKSVTNSDVKKD 824
            DVGR LPGGS VRDMET FEV+SVNG     + ++P + +   S+IV E     S V  D
Sbjct: 199  DVGRVLPGGSFVRDMETTFEVVSVNG-----EKTEPLEVE---SVIVVEGEPGLSCVGDD 250

Query: 825  EVLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPV 1004
             V+VRAFPRSGRTHQIRLHC+YLGIPIRGDVKY G+YEW G+TF+GHELHAESLS +HPV
Sbjct: 251  VVVVRAFPRSGRTHQIRLHCRYLGIPIRGDVKYHGMYEWRGRTFEGHELHAESLSFDHPV 310

Query: 1005 TDLPVVFWAPLPLWAS 1052
            T  P+V  APLP W +
Sbjct: 311  TGEPIVIRAPLPCWVA 326


>ref|XP_006302538.1| hypothetical protein CARUB_v10020638mg [Capsella rubella]
            gi|565489799|ref|XP_006302539.1| hypothetical protein
            CARUB_v10020638mg [Capsella rubella]
            gi|482571248|gb|EOA35436.1| hypothetical protein
            CARUB_v10020638mg [Capsella rubella]
            gi|482571249|gb|EOA35437.1| hypothetical protein
            CARUB_v10020638mg [Capsella rubella]
          Length = 329

 Score =  365 bits (936), Expect = 3e-98
 Identities = 194/320 (60%), Positives = 227/320 (70%), Gaps = 4/320 (1%)
 Frame = +3

Query: 105  SDSSSTKDLNTLTNYXXXXXXXXXXXXKQIELSRAMSASSRSGLYTLSRSDVLFEDEWLI 284
            S  ++T +LN   NY            K IEL RAM ASS+S LY L+R DVL+EDE L+
Sbjct: 29   SMEATTSELNL--NYPKPISSPPPPISKDIELKRAMEASSKSSLYNLTRDDVLYEDEHLM 86

Query: 285  VVNKPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQSSLPELHLANRLDRDTSGV 464
             VNKP+GVYCE VL S P I+ DS+                    E HLANRLDRDTSGV
Sbjct: 87   AVNKPKGVYCEAVLRSAPQIVLDSSS-------------------EFHLANRLDRDTSGV 127

Query: 465  MVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITISSGHGRSKYGAWRVYAAS 644
            M+ITKS+KVAAKLVKAFT HK+ K+YIALCIG +P W K+T+SSGHGRSK+GAWRVY+A 
Sbjct: 128  MIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWSKVTVSSGHGRSKHGAWRVYSAL 187

Query: 645  DVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDD--KNNSIIVEEKSVTNSDVK 818
            DVGR LPGGS VRDMET FEV+SVNG  S     D  K +  +  S++V E     S  +
Sbjct: 188  DVGRVLPGGSFVRDMETTFEVVSVNGVKSESCEVDGVKTESCEVESVVVVEGKREVSSCE 247

Query: 819  KDE--VLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGKTFDGHELHAESLSL 992
             D+  V+VRAFPRSGRTHQIRLHCQYLGIPIRGDVKY G YEW G+TF+GHELHAE LSL
Sbjct: 248  GDDVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYHGRYEWCGRTFEGHELHAECLSL 307

Query: 993  NHPVTDLPVVFWAPLPLWAS 1052
            +HPVTD P+VF AP+P WA+
Sbjct: 308  DHPVTDEPIVFRAPVPCWAA 327


>ref|XP_002894642.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297340484|gb|EFH70901.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 321

 Score =  361 bits (926), Expect = 4e-97
 Identities = 191/335 (57%), Positives = 230/335 (68%), Gaps = 2/335 (0%)
 Frame = +3

Query: 57   YSFPLPTMSDSDQTHLSDSSSTKDLNTLTN--YXXXXXXXXXXXXKQIELSRAMSASSRS 230
            +SF + T S   + + + S+   +  +  N  Y            K IEL RAM ASS+S
Sbjct: 8    FSFSISTNSILTKPYFAISTKAMEATSELNLHYPKPISPPPPPISKDIELRRAMEASSKS 67

Query: 231  GLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADSDRRNEADGHSRATQS 410
             L+ L+R  VL+EDE+L+ VNKP+GVYCE VL S P I+ DS+                 
Sbjct: 68   SLFNLTRDHVLYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSSS---------------- 111

Query: 411  SLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYIALCIGPAPKWEKITI 590
               E HLANRLDRDTSGVM+ITKS+KVAAKLVKAFT HK+ K+YIALCIG +P W KIT+
Sbjct: 112  ---EFHLANRLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRKITV 168

Query: 591  SSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGKGSFKKVSDPRKDDKN 770
            SSGHGRSK+GAWRVYAA DVGR LPGGS VRDMET FEV+SVNG  +        +  + 
Sbjct: 169  SSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNGVET--------ESCEV 220

Query: 771  NSIIVEEKSVTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEGK 950
             ++IV E+    S    D V+VRAFPRSGRTHQIRLHCQYLGI IRGDVKY G+YEW G+
Sbjct: 221  ENVIVVEREQELSCAGDDVVVVRAFPRSGRTHQIRLHCQYLGISIRGDVKYHGMYEWRGR 280

Query: 951  TFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQ 1055
            TF+GHELHAE LSL+HPVTD P+V  APLP WA++
Sbjct: 281  TFEGHELHAECLSLDHPVTDDPIVIRAPLPCWATR 315


>dbj|BAK01967.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 346

 Score =  360 bits (925), Expect = 6e-97
 Identities = 188/295 (63%), Positives = 217/295 (73%), Gaps = 3/295 (1%)
 Frame = +3

Query: 186  KQIELSRAMSASSRSGLYTLSRSDVLFEDEWLIVVNKPQGVYCERVLASVPSILNDSADS 365
            K +EL RAM+AS+RSG Y  S + V+FEDEWL VV+KP GVYCE +L+++P     S D 
Sbjct: 65   KDVELRRAMTASARSGAY--SSAAVVFEDEWLAVVDKPAGVYCEALLSALPCSTASSGDP 122

Query: 366  DRRNEADGHSRATQSSLPELHLANRLDRDTSGVMVITKSNKVAAKLVKAFTNHKVNKTYI 545
                          SS P LHLANRLDRDTSG+MVITK NKVAAKLVKAFT HKV KTY+
Sbjct: 123  --------------SSKPNLHLANRLDRDTSGLMVITKCNKVAAKLVKAFTEHKVKKTYL 168

Query: 546  ALCIGPAPKWEKITISSGHGRSKYGAWRVYAASDVGRALPGGSVVRDMETKFEVLSVNGK 725
            ALCIG  P WEK+ + SGHGRSK+GAWRVYA SDVGR LPGGS VRDM TKFEVL  +GK
Sbjct: 169  ALCIGYLPAWEKVKVCSGHGRSKHGAWRVYAMSDVGRTLPGGSSVRDMSTKFEVLGTDGK 228

Query: 726  GSFKKVSDPRKDDKNNSIIVEEKS---VTNSDVKKDEVLVRAFPRSGRTHQIRLHCQYLG 896
            G +++ S+   DD   SI V+EK+    +N DVK   V VRA+P+SGRTHQIRLHCQYLG
Sbjct: 229  GQYREPSNVDIDD-IESITVQEKAADQTSNVDVKSHMVFVRAYPQSGRTHQIRLHCQYLG 287

Query: 897  IPIRGDVKYEGVYEWEGKTFDGHELHAESLSLNHPVTDLPVVFWAPLPLWASQVL 1061
            IPIRGDVKY GV EW G   DGH LHAESLS  HPVT LPV F APLP WA++++
Sbjct: 288  IPIRGDVKYGGVIEWNGVDCDGHALHAESLSFVHPVTGLPVTFQAPLPSWANEII 342