BLASTX nr result
ID: Paeonia22_contig00018389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00018389
(453 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19898.3| unnamed protein product [Vitis vinifera] 59 4e-17
ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I sub... 57 9e-16
ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I sub... 56 2e-15
ref|XP_002875292.1| transcription factor S-II domain-containing ... 56 3e-15
ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 3e-15
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian... 55 4e-15
ref|XP_007017850.1| TFIIB zinc-binding protein, putative [Theobr... 55 4e-15
ref|XP_002318989.1| transcription factor S-II domain-containing ... 55 6e-15
gb|AAF79907.1|AC022472_16 Contains a weak similarity to transcri... 54 1e-14
ref|XP_006292047.1| hypothetical protein CARUB_v10018251mg [Caps... 52 3e-14
ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutr... 52 4e-14
gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Ory... 59 6e-14
ref|XP_006416439.1| hypothetical protein EUTSA_v10009132mg [Eutr... 51 1e-13
ref|XP_007162730.1| hypothetical protein PHAVU_001G175600g [Phas... 54 1e-13
ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycin... 54 2e-13
ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I sub... 55 2e-13
gb|ACA24493.1| TFIIS domain-containing protein [Cucumis sativus] 53 2e-13
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ... 52 4e-13
ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I sub... 51 1e-12
dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare] 49 2e-12
>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
Length = 126
Score = 59.3 bits (142), Expect(2) = 4e-17
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEI 208
M+YS QR F+FC++CGTML + S KYAEC LC +++ K+ +EI
Sbjct: 1 MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREI 46
Score = 54.3 bits (129), Expect(2) = 4e-17
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 222 FVKLDTINLECGGEGMNATVRRKCEKCPS-MFAEYTTQQTRSADEGQSVFYTCVKCRYMV 398
FVKLD I E E NA + +C++C + Y T+Q RSADEGQ++FY C KC +
Sbjct: 64 FVKLDGIITE-ESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGHKW 122
Query: 399 KEN 407
+N
Sbjct: 123 SQN 125
>ref|XP_004143007.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
1 [Cucumis sativus] gi|449450516|ref|XP_004143008.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform 2 [Cucumis sativus]
gi|449450518|ref|XP_004143009.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
sativus] gi|449500372|ref|XP_004161079.1| PREDICTED:
DNA-directed RNA polymerase I subunit RPA12-like isoform
1 [Cucumis sativus] gi|449500375|ref|XP_004161080.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform 2 [Cucumis sativus]
gi|449500379|ref|XP_004161081.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform 3 [Cucumis
sativus]
Length = 116
Score = 56.6 bits (135), Expect(2) = 9e-16
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +3
Query: 273 ATVRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
A RR+CEKC + A + ++Q RSADEGQ+ FYTC KC + +EN
Sbjct: 72 AKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN 116
Score = 52.4 bits (124), Expect(2) = 9e-16
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
M+YS FLFC++CGTML S KY EC C +++ AKE +EI E
Sbjct: 1 MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAE 53
>ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cicer
arietinum]
Length = 116
Score = 55.8 bits (133), Expect(2) = 2e-15
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
MSYS R FLFC++CGTML + S +YA+C LC K++ K + +EI E
Sbjct: 1 MSYSRGRDFLFCNLCGTMLAVPSTEYAQCPLCKTKQNIKHIKGKEISYTISAE 53
Score = 52.0 bits (123), Expect(2) = 2e-15
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
V + CEKC A + T+Q RSADEGQ+ FYTC +C + +EN
Sbjct: 74 VNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQFQEN 116
>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
transcription factor S-II domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 119
Score = 55.8 bits (133), Expect(2) = 3e-15
Identities = 26/53 (49%), Positives = 32/53 (60%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
M S + FLFC+ CGTML LKS KYAEC LC ++AKE ++I E
Sbjct: 1 MEKSRESGFLFCNWCGTMLVLKSTKYAECPLCKTTRNAKEIINKDIAYTVTAE 53
Score = 51.6 bits (122), Expect(2) = 3e-15
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKE 404
+++ CEKC YTT+QTRSADEGQ+ +YTC C + E
Sbjct: 77 IKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118
>ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
X1 [Cicer arietinum] gi|502132990|ref|XP_004501609.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform X2 [Cicer arietinum]
gi|502132992|ref|XP_004501610.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform X3 [Cicer
arietinum]
Length = 116
Score = 55.1 bits (131), Expect(2) = 3e-15
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
MSYS R FLFC +CGTML + S +YA+C LC +K+ ++ + +EI E
Sbjct: 1 MSYSRGRDFLFCHLCGTMLAVPSTEYAQCPLCKTRKNIRDIKGKEISYTISAE 53
Score = 52.0 bits (123), Expect(2) = 3e-15
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
V + CEKC A + T+Q RSADEGQ+ FYTC +C + +EN
Sbjct: 74 VNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQFQEN 116
>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
gi|9279599|dbj|BAB01057.1| unnamed protein product
[Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
putative RNA polymerase I subunit [Arabidopsis thaliana]
gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
protein [Arabidopsis thaliana]
Length = 119
Score = 55.1 bits (131), Expect(2) = 4e-15
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
M S + FLFC++CGTML LKS KYAEC C ++AK+ ++EI E
Sbjct: 1 MEKSRESEFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAE 53
Score = 51.6 bits (122), Expect(2) = 4e-15
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKE 404
+++ CEKC YTT+QTRSADEGQ+ +YTC C + E
Sbjct: 77 IKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118
>ref|XP_007017850.1| TFIIB zinc-binding protein, putative [Theobroma cacao]
gi|508723178|gb|EOY15075.1| TFIIB zinc-binding protein,
putative [Theobroma cacao]
Length = 119
Score = 55.1 bits (131), Expect(2) = 4e-15
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
M+YS R F+FC CG+ML L S KYAEC LC K AK +EIG E
Sbjct: 1 MAYSQARDFMFCSFCGSMLSLVSPKYAECPLCKFKPSAKGILGREIGYTITAE 53
Score = 51.6 bits (122), Expect(2) = 4e-15
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3
Query: 273 ATVRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
A +++ C+KC EYTT+Q RSADEGQ+VF C C++ EN
Sbjct: 75 ALIKQTCKKCGHPELEYTTRQMRSADEGQTVFLVCPNCKFKDTEN 119
>ref|XP_002318989.1| transcription factor S-II domain-containing family protein [Populus
trichocarpa] gi|222857365|gb|EEE94912.1| transcription
factor S-II domain-containing family protein [Populus
trichocarpa]
Length = 117
Score = 55.5 bits (132), Expect(2) = 6e-15
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEI 208
M+++ F+FCD+CGTM+FL S ++ EC LC KK AK+ E+EI
Sbjct: 1 MAHARGGDFMFCDLCGTMMFLYSKEHVECPLCKFKKSAKDLSEREI 46
Score = 50.8 bits (120), Expect(2) = 6e-15
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
+ +KCEKC +++T+Q RSADEGQ+ F+ C C Y EN
Sbjct: 75 INKKCEKCGHTKLKFSTRQMRSADEGQTTFFHCANCSYTFTEN 117
>gb|AAF79907.1|AC022472_16 Contains a weak similarity to transcription elongation factor S-II
from Drosophila melanogaster gi|135660 and contains a
transcription factor S-II domain PF|01096 [Arabidopsis
thaliana]
Length = 122
Score = 53.9 bits (128), Expect(2) = 1e-14
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +2
Query: 68 IMSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCEI 232
+M S + LFC++CGTML LKS KYAEC LC ++ KE ++ + EI
Sbjct: 26 LMEKSRESDILFCNLCGTMLVLKSTKYAECPLCETTRNGKEIIDKNLAYTVTTEI 80
Score = 51.2 bits (121), Expect(2) = 1e-14
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKE 404
+++ CEKC YTT+QTRSADEGQ+ +YTC C + E
Sbjct: 80 IKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCGHRFTE 121
>ref|XP_006292047.1| hypothetical protein CARUB_v10018251mg [Capsella rubella]
gi|482560754|gb|EOA24945.1| hypothetical protein
CARUB_v10018251mg [Capsella rubella]
Length = 119
Score = 52.4 bits (124), Expect(2) = 3e-14
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
M + + FLFC +CGTML LKS K+AEC LC + AK+ +++I E
Sbjct: 1 MKKAQESGFLFCGLCGTMLILKSRKHAECPLCKTTRKAKDIIDKDIAYKVSAE 53
Score = 51.6 bits (122), Expect(2) = 3e-14
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKE 404
+++ CEKC YTT+QTRSADEGQ+ +YTC C + E
Sbjct: 77 IKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118
>ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutrema salsugineum]
gi|557087097|gb|ESQ27949.1| hypothetical protein
EUTSA_v10019327mg [Eutrema salsugineum]
Length = 119
Score = 52.0 bits (123), Expect(2) = 4e-14
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
M S + FLFC++CGTML LKS AEC LC ++AKE +EI E
Sbjct: 1 MEKSRESGFLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKEIAYTVSAE 53
Score = 51.6 bits (122), Expect(2) = 4e-14
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKE 404
+++ CEKC YTT+QTRSADEGQ+ +YTC C + E
Sbjct: 77 IKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCSHRFTE 118
>gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza sativa Japonica Group]
gi|108710721|gb|ABF98516.1| Transcription factor S-II
family protein, expressed [Oryza sativa Japonica Group]
Length = 126
Score = 58.5 bits (140), Expect(2) = 6e-14
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 273 ATVRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
ATV ++CEKC + +Y T+Q RSADEGQ+VFY C CR+ EN
Sbjct: 81 ATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCANCRHEFNEN 125
Score = 44.3 bits (103), Expect(2) = 6e-14
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQE 205
M++ R FLFC VCGT+L S + A C LC K+ AK+ + +E
Sbjct: 1 MAFWQARDFLFCGVCGTLLKFDSVRSASCPLCGFKRKAKDIEGKE 45
>ref|XP_006416439.1| hypothetical protein EUTSA_v10009132mg [Eutrema salsugineum]
gi|312281609|dbj|BAJ33670.1| unnamed protein product
[Thellungiella halophila] gi|557094210|gb|ESQ34792.1|
hypothetical protein EUTSA_v10009132mg [Eutrema
salsugineum]
Length = 119
Score = 51.2 bits (121), Expect(2) = 1e-13
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKE 404
+++ CEKC YTT+QTRSADEGQ+ +YTC C + E
Sbjct: 77 IKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCGHRFTE 118
Score = 50.8 bits (120), Expect(2) = 1e-13
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
M S + FLFC++CGTML LKS AEC LC ++AKE ++I E
Sbjct: 1 MEKSRESGFLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKDIAYTVSAE 53
>ref|XP_007162730.1| hypothetical protein PHAVU_001G175600g [Phaseolus vulgaris]
gi|561036194|gb|ESW34724.1| hypothetical protein
PHAVU_001G175600g [Phaseolus vulgaris]
Length = 115
Score = 54.3 bits (129), Expect(2) = 1e-13
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
V +KCEKC A + T+Q RSADEGQ+ FYTC +C + +EN
Sbjct: 73 VNKKCEKCGHDEANFYTRQMRSADEGQTTFYTCTRCGHQSQEN 115
Score = 47.4 bits (111), Expect(2) = 1e-13
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 95 FLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
FLFC +CGTML + + +YA C LC +D ++ +++EIG E
Sbjct: 8 FLFCHLCGTMLTVPNSEYAVCPLCKTLRDIQDIRDKEIGYTIYAE 52
>ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine max]
gi|255632466|gb|ACU16583.1| unknown [Glycine max]
Length = 116
Score = 53.5 bits (127), Expect(2) = 2e-13
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
V +KCEKC A Y T+Q RSADEGQ+ FYTC C + +EN
Sbjct: 74 VSKKCEKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116
Score = 47.8 bits (112), Expect(2) = 2e-13
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +2
Query: 95 FLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEI 208
FLFC++CGTML + S +YA+C LC ++D ++ ++EI
Sbjct: 8 FLFCNLCGTMLTVPSTEYAQCPLCKTRRDIQDICDKEI 45
>ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
[Solanum lycopersicum] gi|565396690|ref|XP_006363942.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform X1 [Solanum tuberosum]
gi|565396692|ref|XP_006363943.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform X2 [Solanum
tuberosum]
Length = 121
Score = 55.5 bits (132), Expect(2) = 2e-13
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEI 208
M+Y QR F+FC++CGTML S KYA C LC KK KE EI
Sbjct: 1 MAYCRQRDFMFCEMCGTMLAFDSPKYARCPLCKFKKRVKEIAGNEI 46
Score = 45.4 bits (106), Expect(2) = 2e-13
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 288 KCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
KC+ C + Y +Q RSADEGQ++FYTC+ C EN
Sbjct: 81 KCKGCQHLGMSYIARQIRSADEGQTIFYTCLVCGNKQTEN 120
>gb|ACA24493.1| TFIIS domain-containing protein [Cucumis sativus]
Length = 116
Score = 53.1 bits (126), Expect(2) = 2e-13
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +3
Query: 273 ATVRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
A RR+CEKC + A + ++Q RSADEGQ+ FYTC KC +EN
Sbjct: 72 AKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTCSKCLPQTREN 116
Score = 47.8 bits (112), Expect(2) = 2e-13
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
M+YS FLFC++ GTML S KY EC C +++ AKE +EI E
Sbjct: 1 MAYSRGHDFLFCNLGGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAE 53
>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
gi|357470681|ref|XP_003605625.1| DNA-directed RNA
polymerase I subunit RPA12 [Medicago truncatula]
gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
I subunit RPA12 [Medicago truncatula]
gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
I subunit RPA12 [Medicago truncatula]
Length = 115
Score = 52.0 bits (123), Expect(2) = 4e-13
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 279 VRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
V + CEKC A + T+Q RSADEGQ+ FYTC +C + +EN
Sbjct: 73 VNKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRCGHQFQEN 115
Score = 48.1 bits (113), Expect(2) = 4e-13
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 77 YSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQEIGXXXXCE 229
YS R FLFC +CGTML + S YA C LC K + K+ + +EI E
Sbjct: 2 YSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAE 52
>ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Oryza
brachyantha]
Length = 125
Score = 51.2 bits (121), Expect(2) = 1e-12
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 273 ATVRRKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
AT+ R C +C EY T+Q RSADEGQ+VF+ C CR+ EN
Sbjct: 80 ATINRLCPECGYHELEYYTKQLRSADEGQTVFFECRDCRHKFNEN 124
Score = 47.4 bits (111), Expect(2) = 1e-12
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQE 205
M++ R FLFC VCGT+L S YA C LC K+ KE Q +E
Sbjct: 1 MAFWQARDFLFCGVCGTLLTFDSLHYASCPLCGFKRKTKEIQGKE 45
>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 125
Score = 48.9 bits (115), Expect(2) = 2e-12
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +2
Query: 71 MSYSHQRAFLFCDVCGTMLFLKSDKYAECRLCNNKKDAKEFQEQE 205
M++ R FLFC VCGT+L S +YA C LC K+ AK+ + +E
Sbjct: 1 MAFWQARDFLFCGVCGTLLDFNSHRYASCPLCGFKRKAKDIEGKE 45
Score = 48.5 bits (114), Expect(2) = 2e-12
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3
Query: 285 RKCEKCPSMFAEYTTQQTRSADEGQSVFYTCVKCRYMVKEN 407
R C KC EY T+Q RSADEGQ++FY C +C + EN
Sbjct: 84 RACPKCNHHELEYYTKQLRSADEGQTIFYECPECGHAFNEN 124