BLASTX nr result

ID: Paeonia22_contig00017611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00017611
         (249 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]        63   4e-08
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...    56   6e-06

>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -1

Query: 171 KTIQVHGFPSHVSHESVKVFLEQETGKETVRAIKFKKIQNTRLRTF-VVQFTTIEDAE 1
           KTIQ+ GFPSHVS ESVK FLE  TG+ TV AIK +  +N   R++ +VQF T+E AE
Sbjct: 3   KTIQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGSRSYAIVQFMTVETAE 60


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/57 (54%), Positives = 37/57 (64%)
 Frame = -1

Query: 171 KTIQVHGFPSHVSHESVKVFLEQETGKETVRAIKFKKIQNTRLRTFVVQFTTIEDAE 1
           KTIQV  FPS+V  E VK FLE  TGKETV A+K ++ +N      +VQFT   DAE
Sbjct: 3   KTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAE 59


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