BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00017568
         (778 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK29467.1| polyprotein-like [Solanum chilense]                    136   7e-30
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   134   3e-29
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot...   115   2e-23
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc...   109   1e-21
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...   109   1e-21
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom...   108   2e-21
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...   108   2e-21
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]        108   2e-21
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   103   5e-20
gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryz...   103   9e-20
ref|XP_007016583.1| Uncharacterized protein TCM_041944 [Theobrom...   101   3e-19
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]   100   6e-19
ref|XP_007209839.1| hypothetical protein PRUPE_ppa014574mg [Prun...   100   8e-19
ref|XP_006405150.1| hypothetical protein EUTSA_v10000703mg, part...   100   1e-18
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      99   2e-18
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         99   2e-18
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    99   2e-18
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]      98   3e-18
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]      97   5e-18
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    95   2e-17

>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  136 bits (343), Expect = 7e-30
 Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
 Frame = -3

Query: 641 MNGVRVDIKLFNG-RDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKA 465
           M+GV+ ++  FNG +  F++ QR+MKD+LIQQ L   L GK K P  M++ DW +LD KA
Sbjct: 1   MSGVKYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKA 60

Query: 464 MSFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIM 285
            S I LH++D+V+ N++ E SA G   K+E LYMSK++ NKL+LK +L  L M+EG + +
Sbjct: 61  ASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTLHMDEGTNFL 120

Query: 284 EHLGSFNRCITNLFKVDVKYAENDKALMLLRHFVQ*SSPQILISKCNVFLHKMDGLEL 111
            HL   N  IT L  + VK  E DK ++LL      S P    +     LH  D ++L
Sbjct: 121 SHLNVLNGLITQLANLGVKIEEEDKRIVLLN-----SLPSSYDTLSTTILHGKDSIQL 173


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  134 bits (338), Expect = 3e-29
 Identities = 74/177 (41%), Positives = 106/177 (59%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           M+GV+ ++  FNG + F+  QR+M+D+LIQQ L  VL+   K P  M+  DW  LD +A 
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
           S I LH+SD+V+ N++ E +A+G   ++E LYMSK++ NKL+LK +L  L M EG + + 
Sbjct: 61  SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLS 120

Query: 281 HLGSFNRCITNLFKVDVKYAENDKALMLLRHFVQ*SSPQILISKCNVFLHKMDGLEL 111
           HL  FN  IT L  + VK  E DKA++LL      S P    +     LH    +EL
Sbjct: 121 HLNVFNGLITQLANLGVKIEEEDKAILLLN-----SLPSSYDNLATTILHGKTTIEL 172


>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
           gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
           superfamily protein [Theobroma cacao]
          Length = 1029

 Score =  115 bits (287), Expect = 2e-23
 Identities = 62/162 (38%), Positives = 100/162 (61%)
 Frame = -3

Query: 680 AMASGVKVDTKPSMNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGM 501
           A  S V ++   + +  + +I+ FNGR++F++ + KM+ +L+QQ LL  L+GK+ +P+ +
Sbjct: 112 ASRSWVNLNLAMATSSTKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNL 171

Query: 500 EINDWNKLDIKAMSFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDEL 321
              + + L  KA S I L +SDEV+  V  E SA     K+E +YM+KS+ N+L++K  L
Sbjct: 172 SDGEKDDLMKKAHSVILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRL 231

Query: 320 LNLRMEEGGDIMEHLGSFNRCITNLFKVDVKYAENDKALMLL 195
             L+M EG  +  H+  FNR I +L  +DVK  + D AL+LL
Sbjct: 232 YTLKMSEGTSVNTHIDEFNRVILDLKNIDVKIEDEDLALILL 273


>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 415

 Score =  109 bits (273), Expect = 1e-21
 Identities = 54/145 (37%), Positives = 94/145 (64%)
 Frame = -3

Query: 629 RVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMSFIE 450
           + ++  F+G  NF + Q ++KD+L QQ +   L+  + MP  ++ + WN++  +A + I 
Sbjct: 8   KFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQ--ETMPEKIDADKWNEMKAQAAATIR 65

Query: 449 LHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEHLGS 270
           L +SD V++ VM E S K   DK+  L+MSKS+ +KL+LK +L  L+++E  D+ +H+  
Sbjct: 66  LSLSDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYLKQQLYGLQVQEESDLRKHVDV 125

Query: 269 FNRCITNLFKVDVKYAENDKALMLL 195
           FN+ + +L K+DVK  + DKA++LL
Sbjct: 126 FNQLVVDLSKLDVKLDDEDKAIILL 150


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score =  109 bits (272), Expect = 1e-21
 Identities = 55/145 (37%), Positives = 92/145 (63%)
 Frame = -3

Query: 629 RVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMSFIE 450
           + ++  F+G  NF + Q ++KD+L QQ +   LE  + MP  M+   W ++  +A + I 
Sbjct: 8   KFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALE--ETMPEKMDAGKWEEMKAQAAATIR 65

Query: 449 LHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEHLGS 270
           L +SD V++ VM E ++K    K+  LYMSKS+ +KL+LK +L  L+M+E  D+ +H+  
Sbjct: 66  LSLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDV 125

Query: 269 FNRCITNLFKVDVKYAENDKALMLL 195
           FN+ + +L K+DVK  + DKA++LL
Sbjct: 126 FNQLVVDLSKLDVKLDDEDKAIILL 150


>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
           gi|508717229|gb|EOY09126.1| Uncharacterized protein
           TCM_024518 [Theobroma cacao]
          Length = 277

 Score =  108 bits (271), Expect = 2e-21
 Identities = 58/148 (39%), Positives = 94/148 (63%)
 Frame = -3

Query: 638 NGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMS 459
           +  + +I+ FNGR++F++ + KM  +L+QQ LL  L+GK+ +P+ +  ++ + L  KA S
Sbjct: 4   SSTKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHS 63

Query: 458 FIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEH 279
            I L +SDEV+  V  E SA     K+E +Y++KS+ N+L++K  L  L+M EG  +  H
Sbjct: 64  AILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTH 123

Query: 278 LGSFNRCITNLFKVDVKYAENDKALMLL 195
           +  FNR I +L  +DVK  + D AL+LL
Sbjct: 124 IDEFNRVILDLKNIDVKIEDEDLALILL 151


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score =  108 bits (270), Expect = 2e-21
 Identities = 55/145 (37%), Positives = 91/145 (62%)
 Frame = -3

Query: 629 RVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMSFIE 450
           + ++  F+G  NF + Q ++KD+L QQ +   LE  + MP  M+   W ++  +A + I 
Sbjct: 8   KFEVVKFDGTGNFILWQMRLKDLLAQQGISKALE--ETMPEKMDAGKWEEMKAQAAATIR 65

Query: 449 LHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEHLGS 270
           L +SD V++ VM E + K   DK+  LYMSKS+ +KL+LK +L  L+M+E  D+ +H+  
Sbjct: 66  LSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDV 125

Query: 269 FNRCITNLFKVDVKYAENDKALMLL 195
           FN+ + +L K+DVK  + D A++LL
Sbjct: 126 FNQLVVDLSKLDVKLDDEDMAIILL 150


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score =  108 bits (270), Expect = 2e-21
 Identities = 54/146 (36%), Positives = 97/146 (66%)
 Frame = -3

Query: 632 VRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMSFI 453
           ++ D+  F+G  NF + Q ++KD+L QQ++   L+G    P  ME +D  ++ ++A + I
Sbjct: 88  MKFDLVKFDGFGNFGLWQTRVKDLLAQQEVSKALKGVK--PAKMEDDDCEEMQLQAAATI 145

Query: 452 ELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEHLG 273
              +SD+++++VM+E S K   +K+E  +MSK++ NK +LK +L  L+M+EG D+  H+ 
Sbjct: 146 RRCLSDQIMYHVMEETSPKIIWEKLEAQFMSKTLTNKRYLKQKLYGLKMQEGADLTAHVN 205

Query: 272 SFNRCITNLFKVDVKYAENDKALMLL 195
            FN+ +T+L K+DV+  + DKA++LL
Sbjct: 206 VFNQLVTDLVKMDVEVDDEDKAIVLL 231


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  103 bits (258), Expect = 5e-20
 Identities = 55/149 (36%), Positives = 91/149 (61%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           M+  + +++ FNG ++FT+ + KMK +L+QQ     +EG++ +P G+   +  ++  +A 
Sbjct: 1   MSSQKFEVEKFNGSNDFTLWKLKMKALLVQQKCAQAIEGEETLPVGLTAVEKEEVVSRAH 60

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
           S I L ++DEV+  V  E +A G   K E  Y  KS+ N+L+ K +L  L+M EG  + +
Sbjct: 61  SAILLSLADEVLREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKMSEGMQVRD 120

Query: 281 HLGSFNRCITNLFKVDVKYAENDKALMLL 195
           HL +FNR I +L  V VK  E D+A++LL
Sbjct: 121 HLNNFNRIILDLNGVGVKVEEEDQAMILL 149


>gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryza sativa Japonica
           Group] gi|108706491|gb|ABF94286.1| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 556

 Score =  103 bits (256), Expect = 9e-20
 Identities = 52/129 (40%), Positives = 84/129 (65%)
 Frame = -3

Query: 581 QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMSFIELHISDEVIFNVMQELS 402
           Q ++KD+L QQ +   LE  + MP  M++  W ++  +A + I L +SD V++ VM E +
Sbjct: 155 QMRLKDLLAQQGISKALE--ETMPEKMDVGKWVEMKAQATAIIRLSLSDFVMYQVMDEKT 212

Query: 401 AKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEHLGSFNRCITNLFKVDVKYA 222
            K   DK+  LYMSKS+ +KL+LK +L  L+M+E  D+ +H+  FN+ + +L K+DVK  
Sbjct: 213 PKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLD 272

Query: 221 ENDKALMLL 195
           + DKA++LL
Sbjct: 273 DEDKAIILL 281


>ref|XP_007016583.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
           gi|508786946|gb|EOY34202.1| Uncharacterized protein
           TCM_041944 [Theobroma cacao]
          Length = 698

 Score =  101 bits (252), Expect = 3e-19
 Identities = 57/148 (38%), Positives = 91/148 (61%)
 Frame = -3

Query: 638 NGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMS 459
           +  + +I+ FNGR++F++   KM  +L+QQ LL  L+ K+ + + +   + + L  KA S
Sbjct: 4   SSTKYEIEKFNGRNDFSLWCVKMCALLVQQGLLKALKEKEHLLSNLSNGEKDNLMEKAHS 63

Query: 458 FIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEH 279
            I L +SDEVI  V  E SA     K++ +YM+KS++N+L++K  L  L+M EG  +  H
Sbjct: 64  AILLALSDEVIREVTDEESAIAVWLKLKSIYMTKSLMNRLYIKQRLYTLKMSEGTSVNTH 123

Query: 278 LGSFNRCITNLFKVDVKYAENDKALMLL 195
           +  FNR I +L  +DVK  + D AL+LL
Sbjct: 124 IDEFNRVILDLKNIDVKIEDEDLALILL 151


>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
          Length = 127

 Score =  100 bits (249), Expect = 6e-19
 Identities = 50/126 (39%), Positives = 79/126 (62%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           ++  + D+  F+G  NF + QR++KD+L+QQ ++  L GK   P GM   DW  L++K  
Sbjct: 4   ISSAKFDVVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGKQ--PEGMNNMDWKDLEVKVA 61

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
           + I L ++D+V+++VM E S      K+E  YMSK + NKL+LK +L  L+M EG D+ +
Sbjct: 62  ATIRLCLADDVMYHVMDEESPTAIWLKLESQYMSKLLTNKLYLKQKLYGLKMAEGSDLSQ 121

Query: 281 HLGSFN 264
           H+  FN
Sbjct: 122 HINVFN 127


>ref|XP_007209839.1| hypothetical protein PRUPE_ppa014574mg [Prunus persica]
           gi|462405574|gb|EMJ11038.1| hypothetical protein
           PRUPE_ppa014574mg [Prunus persica]
          Length = 157

 Score =  100 bits (248), Expect = 8e-19
 Identities = 58/149 (38%), Positives = 89/149 (59%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           M+ V+V +K F  ++NFT+ QR+MK +L +Q          K  T  ++ +W+ LD  A 
Sbjct: 1   MSSVKVKLKSFTDKENFTLWQRRMKYVLKKQ----------KQDTMTDV-EWDNLDELAK 49

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
             IE H+++E               +K+E ++ SKS+ NKLFLK+EL +L+MEEG  +ME
Sbjct: 50  GSIEQHLTNE---------------EKLEEMFESKSLSNKLFLKEELHSLKMEEGASLME 94

Query: 281 HLGSFNRCITNLFKVDVKYAENDKALMLL 195
           H+ +FNRCI NL ++D  Y   DKA++ L
Sbjct: 95  HVSTFNRCIANLQRMDEVYKLEDKAVIFL 123


>ref|XP_006405150.1| hypothetical protein EUTSA_v10000703mg, partial [Eutrema
           salsugineum] gi|557106278|gb|ESQ46603.1| hypothetical
           protein EUTSA_v10000703mg, partial [Eutrema salsugineum]
          Length = 162

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 53/148 (35%), Positives = 92/148 (62%)
 Frame = -3

Query: 638 NGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMS 459
           N ++ DI  FNG+ NF + Q ++KD+L QQ +   L   +K P  ++ +DW+ +  +A+S
Sbjct: 5   NSLKFDIPRFNGKGNFGLWQSRVKDLLTQQGMKKAL--LEKKPDKIKQDDWDDMQDQAVS 62

Query: 458 FIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEH 279
            I   +SD++              +++E +YMSKS+ +KL+LK +L  L+M E GD++ H
Sbjct: 63  TIRFCLSDDIT-------------NQLEKMYMSKSLSSKLYLKQKLFGLKMVESGDLIAH 109

Query: 278 LGSFNRCITNLFKVDVKYAENDKALMLL 195
           + +FN+ I +L +VD+K  + DKA++LL
Sbjct: 110 INNFNQIIGDLTRVDMKIEDEDKAMILL 137


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 54/149 (36%), Positives = 89/149 (59%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           M  ++ D+ L +    F++ Q KM+ +L QQDL   L G DK       ND  K D KAM
Sbjct: 36  MASLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWS-NDEKKKDRKAM 94

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
           S+I LH+S+ ++  V++E +A G   K+E + M+K + +K+ LK +L   ++++ G +M+
Sbjct: 95  SYIHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMD 154

Query: 281 HLGSFNRCITNLFKVDVKYAENDKALMLL 195
           HL +F   + +L  ++VKY E D  L+LL
Sbjct: 155 HLSTFKEIVADLESIEVKYDEEDLGLILL 183


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 54/149 (36%), Positives = 90/149 (60%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           M  ++ D+ L +    F++ Q KM+ +L QQ+L   L G DK       ND  K D KAM
Sbjct: 1   MTSLKYDLPLLDRDTRFSLWQVKMRAVLAQQELDDALSGFDKRTQDWS-NDEKKRDRKAM 59

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
           S+I LH+S+ ++  V++E +A G   K+E + M+K + +K+ LK +L   ++++ G +M+
Sbjct: 60  SYIHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMD 119

Query: 281 HLGSFNRCITNLFKVDVKYAENDKALMLL 195
           HL +F   + +L  ++VKY E D AL+LL
Sbjct: 120 HLSAFKEIVADLESMEVKYDEKDLALILL 148


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 54/149 (36%), Positives = 89/149 (59%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           M  ++ D+ L +    F++ Q KM+ +L QQDL   L G DK       ND  K D KAM
Sbjct: 36  MASLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWS-NDEKKKDRKAM 94

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
           S+I LH+S+ ++  V++E +A G   K+E + M+K + +K+ LK +L   ++++ G +M+
Sbjct: 95  SYIHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMD 154

Query: 281 HLGSFNRCITNLFKVDVKYAENDKALMLL 195
           HL +F   + +L  ++VKY E D  L+LL
Sbjct: 155 HLSTFKEIVADLESIEVKYDEEDLGLILL 183


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 52/126 (41%), Positives = 77/126 (61%)
 Frame = -3

Query: 572 MKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAMSFIELHISDEVIFNVMQELSAKG 393
           MK++LIQQ+    +  K   PT M    W K + K  S IELH++D V+ ++ + ++AK 
Sbjct: 1   MKNVLIQQETDKAIRTK---PTNMSDVLWTKKNKKTKSCIELHLADNVLLHIGETMTAKE 57

Query: 392 TCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIMEHLGSFNRCITNLFKVDVKYAEND 213
             + +E +Y  KS+ NKL LK++L  L+MEEG D+ +H+  F  CI NL KV  K  + D
Sbjct: 58  AWENLESVYKGKSIGNKLLLKEQLFGLKMEEGDDLNDHICKFQNCIANLEKVGAKMDDED 117

Query: 212 KALMLL 195
            A+MLL
Sbjct: 118 TAVMLL 123


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 53/149 (35%), Positives = 89/149 (59%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           M  ++ D+ L +    F++ Q KM+ +L QQDL   L G DK       ND  K D K M
Sbjct: 1   MASLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWS-NDEKKRDRKTM 59

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
           S+I LH+S+ ++  V++E +A G   K+E + M+K + +K+ LK +L   ++++ G +M+
Sbjct: 60  SYIHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMD 119

Query: 281 HLGSFNRCITNLFKVDVKYAENDKALMLL 195
           HL +F + + +L  ++VKY E D  L+LL
Sbjct: 120 HLSAFKKIVADLESMEVKYDEEDLCLILL 148


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 55/149 (36%), Positives = 86/149 (57%)
 Frame = -3

Query: 641 MNGVRVDIKLFNGRDNFTI*QRKMKDILIQQDLLFVLEGKDKMPTGMEINDWNKLDIKAM 462
           M  ++ D+ L      F++ Q KM+ +L QQDL   L G DK       ND  K D KAM
Sbjct: 208 MASLKYDLPLLYRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTHDWS-NDEKKRDRKAM 266

Query: 461 SFIELHISDEVIFNVMQELSAKGTCDKIECLYMSKSMLNKLFLKDELLNLRMEEGGDIME 282
           S+I LH+S+ ++  V++E  A G   K+E + M+K + +K+ LK  L   ++++ G +M+
Sbjct: 267 SYIHLHLSNNILQEVLKEEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMD 326

Query: 281 HLGSFNRCITNLFKVDVKYAENDKALMLL 195
           HL +F   I +L  ++VKY E D  L+LL
Sbjct: 327 HLSAFKEIIADLESMEVKYDEEDLGLILL 355