BLASTX nr result

ID: Paeonia22_contig00017353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00017353
         (713 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A...    59   2e-06
ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein A...    57   8e-06

>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 487

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
 Frame = -3

Query: 663 HYVGH--FLLNLTTL-GISRMQDWFLGKFESESALSMSI*Y----LGKLAYLFWAIWKSR 505
           H  GH  F   +  L GIS + DW  G  +    + ++  Y      K+  ++W IWK+R
Sbjct: 215 HLFGHCDFTTEVFRLAGISALMDWHEGYLKVLREMFINQPYDKFLFAKVLIIYWQIWKAR 274

Query: 504 NNKIFKQLPLNRYAIWRSTFIHYSSVM---TIQGDNLCSNFGIVRV*KFCRWIPPYDQFV 334
           N+ IF+ +      +  +   H++       + G  +             RW+PP++ F+
Sbjct: 275 NDTIFRDVITTATNVAATAAFHFNETALYKAVVGGGISQTTSST-----IRWLPPHNNFI 329

Query: 333 KINFDGSKNHVGSVAGWYVLLNSN 262
           KINFDGS     S AG +V  NS+
Sbjct: 330 KINFDGSVQG-RSAAGGFVFRNSD 352


>ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 399

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
 Frame = -3

Query: 663 HYVGHFLLNLTT-----LGISRMQDWFLGKFESESALSMSI*Y----LGKLAYLFWAIWK 511
           H  GH   + TT     +GIS   DW  G  +    + ++  Y      K+  ++W IWK
Sbjct: 123 HLFGH--CDFTTEVFRLVGISAPMDWHKGYLKVLREMFINQPYDKFLFAKVLIIYWQIWK 180

Query: 510 SRNNKIFKQLPLNRYAIWRSTFIHYSSVM---TIQGDNLCSNFGIVRV*KFCRWIPPYDQ 340
           +RN+ IF+ +      +  +   H++       + G  +             RW+PP++ 
Sbjct: 181 ARNDTIFRDVITTATNVVATAAFHFNETALYKAVVGGGISQTTPST-----IRWLPPHNN 235

Query: 339 FVKINFDGSKNHVGSVAGWYVLLNSN 262
           F+KINFDGS     +V G +V  NS+
Sbjct: 236 FIKINFDGSVQGRSAVGG-FVFRNSD 260


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