BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00016905
         (1180 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   586   e-165
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              578   e-162
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   573   e-161
ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Popu...   569   e-160
ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like...   568   e-159
ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citr...   567   e-159
ref|XP_006347631.1| PREDICTED: RNA pseudouridine synthase 7-like...   565   e-158
ref|XP_004235304.1| PREDICTED: RNA pseudourine synthase 7-like [...   563   e-158
ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [...   556   e-156
gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]           551   e-154
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   540   e-151
ref|XP_007137869.1| hypothetical protein PHAVU_009G162600g [Phas...   539   e-151
ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Gly...   538   e-150
gb|EYU43033.1| hypothetical protein MIMGU_mgv1a022495mg [Mimulus...   535   e-149
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul...   532   e-148
ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [...   529   e-147
ref|XP_007038074.1| Pseudouridine synthase family protein isofor...   525   e-146
ref|XP_007038073.1| Pseudouridine synthase family protein isofor...   509   e-141
sp|Q0E0Y3.2|PUS7_ORYSJ RecName: Full=RNA pseudouridine synthase ...   504   e-140
gb|EEC73258.1| hypothetical protein OsI_07380 [Oryza sativa Indi...   504   e-140

>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  586 bits (1511), Expect = e-165
 Identities = 277/374 (74%), Positives = 314/374 (83%), Gaps = 24/374 (6%)
 Frame = +1

Query: 7    DMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPY 186
            +MEIVWQTPAN PERHDYI RNG+RHV+PY+FEFI+HVKNRWAGKTIVDLF EEFKGRPY
Sbjct: 10   EMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPY 69

Query: 187  DYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVC 366
            DYYV+AV+ GRIQVDG++VP+SY+V+SSQKISHF+HRHEPPV+  DVS+LQKE DVLT+C
Sbjct: 70   DYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTIC 129

Query: 367  KPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQQ 546
            KPASVPVHPCGQYRKNTVVGILQAEH +APLFP+HRLDRLVSGLLILARSASKAD FRQQ
Sbjct: 130  KPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQ 189

Query: 547  ----------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKF 660
                                  QVV+VN+NYNAREGRST EV +C  NTP KGK+ACTKF
Sbjct: 190  IEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPLKGKSACTKF 249

Query: 661  MRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAA 840
             RI+TNGTHSIVLC+P+TGRTHQIRVHLQYTGHPIAND+LYLSEF  +RST+GLSADRAA
Sbjct: 250  TRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAA 309

Query: 841  TNSCDALTSDARENCF--XXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYS 1014
             NS  +L S + ++C           DF+IDPMCTNCPNL PKGY+  EEGLWLHC+RY 
Sbjct: 310  ANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYC 369

Query: 1015 GPDWVYECPYPDWA 1056
            GPDWVYECP+P+WA
Sbjct: 370  GPDWVYECPHPEWA 383


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  578 bits (1491), Expect = e-162
 Identities = 276/373 (73%), Positives = 312/373 (83%), Gaps = 24/373 (6%)
 Frame = +1

Query: 10   MEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPYD 189
            MEIVWQTPAN PERHDYI RNG+RHV+PY+FEFI+HVKNRWAGKTIVDLF EEFKGRPYD
Sbjct: 1    MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYD 60

Query: 190  YYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVCK 369
            YYV+AV+ GRIQVDG++VP+SY+V+SSQKISHF+HRHEPPV+  DVS+LQKE DVLT+CK
Sbjct: 61   YYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICK 120

Query: 370  PASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQQ- 546
            PASVPVHPCGQYRKNTVVGILQAEH +APLFP+HRLDRLVSGLLILARSASKAD FRQQ 
Sbjct: 121  PASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQI 180

Query: 547  ---------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKFM 663
                                 QVV+VN+NYNAREGRST  V +C  NTP KGK+ACTKF 
Sbjct: 181  EAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRST--VGNCCGNTPLKGKSACTKFT 238

Query: 664  RINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAAT 843
            RI+TNGTHSIVLC+P+TGRTHQIRVHLQYTGHPIAND+LYLSEF  +RST+GLSADRAA 
Sbjct: 239  RISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAA 298

Query: 844  NSCDALTSDARENCF--XXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYSG 1017
            NS  +L S + ++C           DF+IDPMCTNCPNL PKGY+  EEGLWLHC+RY G
Sbjct: 299  NSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCG 358

Query: 1018 PDWVYECPYPDWA 1056
            PDWVYECP+P+WA
Sbjct: 359  PDWVYECPHPEWA 371


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 385

 Score =  573 bits (1476), Expect = e-161
 Identities = 276/382 (72%), Positives = 311/382 (81%), Gaps = 27/382 (7%)
 Frame = +1

Query: 1    EGDMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGR 180
            + DMEIVWQTPAN PE+HDYI R+GRRHV+PY+FEFI+H KNRWAGKTIVDLFAEEFKGR
Sbjct: 10   KNDMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVDLFAEEFKGR 69

Query: 181  PYDYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLT 360
            PYDYYVSAVKCGRIQVDG+ VP+SY+V+SSQKISHFLHRHEPPV  WD+ +L K+ DV+T
Sbjct: 70   PYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPVLYKDPDVVT 129

Query: 361  VCKPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFR 540
            V KPA+VPVHPCGQYRKNTVVGILQAEH++APLFPVHRLDRLVSGLLILAR+A KADLFR
Sbjct: 130  VYKPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARNALKADLFR 189

Query: 541  Q----------------------QQVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACT 654
            Q                      +QVV VNINYNAREGRSTAEV +   ++P KGKTACT
Sbjct: 190  QEIEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDSPPKGKTACT 249

Query: 655  KFMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADR 834
            KF RI+TNGTHSIVLC+P+TGRTHQIRVHLQYTGHPIAND LYLSE    RS +G+SADR
Sbjct: 250  KFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASRSAEGMSADR 309

Query: 835  AATNSCDALT-----SDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLH 999
            AA +S   +T     SD  E           DF+IDPMCTNCPNLAPKGY+V+EE LWLH
Sbjct: 310  AACSSSYCVTPQDFCSDTHEE------NSVQDFSIDPMCTNCPNLAPKGYDVYEECLWLH 363

Query: 1000 CVRYSGPDWVYECPYPDWALLT 1065
            CV+YSGP WVYECPYPDWA+L+
Sbjct: 364  CVQYSGPGWVYECPYPDWAILS 385


>ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Populus trichocarpa]
            gi|550322484|gb|EEF05856.2| hypothetical protein
            POPTR_0015s11340g [Populus trichocarpa]
          Length = 388

 Score =  569 bits (1466), Expect = e-160
 Identities = 270/377 (71%), Positives = 307/377 (81%), Gaps = 22/377 (5%)
 Frame = +1

Query: 1    EGDMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGR 180
            E  MEIVWQTPAN PE+HDYI R+GRRHV+PY FEFI+HVKNRWAGKTIVDLFAEEFKGR
Sbjct: 13   EKKMEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKTIVDLFAEEFKGR 72

Query: 181  PYDYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLT 360
            PYDYYVSAVKCGRIQVDG++VP+SY+V+SSQKISHF+HRHEPPVM WDV IL KE DV+T
Sbjct: 73   PYDYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWDVPILDKEDDVVT 132

Query: 361  VCKPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFR 540
            V KPA+VPVHPCGQYRKNTVVG+LQAEH +APLFPVHRLDRLVSGLLILAR+A++ADLFR
Sbjct: 133  VWKPATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLILARNATRADLFR 192

Query: 541  Q----------------------QQVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACT 654
            Q                      +Q+V VN+NYNAREGRST EV +  D +P KGKTACT
Sbjct: 193  QEIEAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCDGSPIKGKTACT 252

Query: 655  KFMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADR 834
            KF RI TNG HSIVLC+P+TGRTHQIRVHLQYTGHPIAND+LYLSE V  RS++G++ADR
Sbjct: 253  KFTRIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENVTNRSSEGVNADR 312

Query: 835  AATNSCDALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYS 1014
            AA +  + L  +   +          DF IDPMCTNCPNL PKGY+ HEEGLWLHCV+YS
Sbjct: 313  AAHSPNNCLVPE-NNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQYS 371

Query: 1015 GPDWVYECPYPDWALLT 1065
            G  WVY+CPYPDWA+LT
Sbjct: 372  GSGWVYQCPYPDWAVLT 388


>ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like [Citrus sinensis]
          Length = 405

 Score =  568 bits (1463), Expect = e-159
 Identities = 281/378 (74%), Positives = 306/378 (80%), Gaps = 25/378 (6%)
 Frame = +1

Query: 7    DMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPY 186
            +MEIVWQTPAN P + DYI R+GRR+VKPY+FEFI+HVKNRWAGKTIVDLFAEEFKGRPY
Sbjct: 36   NMEIVWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPY 95

Query: 187  DYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVC 366
            DYYVSAVKCGRIQVD ++VP+SY V+SSQKISHFLHRHEPPVM WDVSILQKE DVLTVC
Sbjct: 96   DYYVSAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVC 155

Query: 367  KPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQQ 546
            KP SVPVHPCGQYRKNTVVGILQAEHD APLFPVHRLDRLVSGLLILAR+ASKADLFRQQ
Sbjct: 156  KPPSVPVHPCGQYRKNTVVGILQAEHDFAPLFPVHRLDRLVSGLLILARNASKADLFRQQ 215

Query: 547  ----------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKF 660
                                  QVV VNINYNA  GRSTAE  D   +TP KGK ACTKF
Sbjct: 216  IEAGKVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAACTKF 275

Query: 661  MRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAA 840
             RI+TNGTHSIVLC+P+TGRTHQIRVHLQYTG+PIAND+LYL E V  R  +G+SADRAA
Sbjct: 276  TRISTNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLYLCEHVTHR--EGMSADRAA 333

Query: 841  T---NSCDALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRY 1011
                +S   ++SD  E+          DF+IDPMCTNCPNLAPKGYE HEEGLWLHCVRY
Sbjct: 334  AYSHHSPPPVSSDKSES-------SSEDFSIDPMCTNCPNLAPKGYEGHEEGLWLHCVRY 386

Query: 1012 SGPDWVYECPYPDWALLT 1065
            SGP W YECPYPDWA L+
Sbjct: 387  SGPGWTYECPYPDWATLS 404


>ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citrus clementina]
            gi|557539094|gb|ESR50138.1| hypothetical protein
            CICLE_v10031733mg [Citrus clementina]
          Length = 399

 Score =  567 bits (1461), Expect = e-159
 Identities = 280/378 (74%), Positives = 307/378 (81%), Gaps = 25/378 (6%)
 Frame = +1

Query: 7    DMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPY 186
            +MEIVWQTPAN P + DYI R+GRR+VKPY+FEFI+HVKNRWAGKTIVDLFAEEFKGRPY
Sbjct: 30   NMEIVWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPY 89

Query: 187  DYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVC 366
            DYYVSAVKCGRIQVD ++VP+SY V+SSQKISHFLHRHEPPVM WDVSILQKE DVLTVC
Sbjct: 90   DYYVSAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVC 149

Query: 367  KPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQQ 546
            KP SVPVHPCGQYRKNTVVGILQAEHD+APLFPVHRLDRLVSGLLILAR+ASKADLFRQQ
Sbjct: 150  KPPSVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNASKADLFRQQ 209

Query: 547  ----------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKF 660
                                  QVV VNINYNA  GRSTAE  D   +TP KGK ACTKF
Sbjct: 210  IEAGKVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAACTKF 269

Query: 661  MRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAA 840
             RI+TNGTHSIVLC+P+TGRTHQIRVHLQYTG+PIAND+LYL E V  R  +G+SADRAA
Sbjct: 270  TRISTNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLYLCEHVTHR--EGMSADRAA 327

Query: 841  T---NSCDALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRY 1011
                +S   ++SD  E+          DF+IDP+CTNCPNLAPKGYE HEEGLWLHCVRY
Sbjct: 328  AYSHHSPPPVSSDKSES-------SSEDFSIDPICTNCPNLAPKGYEGHEEGLWLHCVRY 380

Query: 1012 SGPDWVYECPYPDWALLT 1065
            SGP W YECPYPDWA L+
Sbjct: 381  SGPGWTYECPYPDWATLS 398


>ref|XP_006347631.1| PREDICTED: RNA pseudouridine synthase 7-like [Solanum tuberosum]
          Length = 385

 Score =  565 bits (1457), Expect = e-158
 Identities = 280/376 (74%), Positives = 302/376 (80%), Gaps = 24/376 (6%)
 Frame = +1

Query: 7    DMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPY 186
            DMEIVWQTPAN PERHDYI RNG R+VKPY+FEFI+HVKNRWAGKTIVDLF++EFKGRP 
Sbjct: 11   DMEIVWQTPANPPERHDYIFRNGIRYVKPYYFEFISHVKNRWAGKTIVDLFSDEFKGRPR 70

Query: 187  DYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVC 366
            DYY SAVK GRIQVDGQ V +SYVVQSSQKISHFLHRHEPPVM WDV IL +E DVLTVC
Sbjct: 71   DYYESAVKSGRIQVDGQKVSVSYVVQSSQKISHFLHRHEPPVMSWDVEILCEEPDVLTVC 130

Query: 367  KPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQ- 543
            KPASVPVHPCGQYRKNTVVGILQAE+ +APLFPVHRLDRLVSGLLILARSAS+ADLFRQ 
Sbjct: 131  KPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSASRADLFRQQ 190

Query: 544  ---------------------QQVVSVNINYNAREGRSTAEVNDCSDNTPA--KGKTACT 654
                                 QQVV+ N+NYNAREGRST EV D   ++ A  KGK ACT
Sbjct: 191  IESGAVQKRYIARVIGVFPDKQQVVNANVNYNAREGRSTVEVGDNQGSSTASLKGKAACT 250

Query: 655  KFMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADR 834
            KF RI+TNG  SIVLC+PVTGRTHQIRVHLQYTGHPIAND+LYLSEFV  RS QGLSADR
Sbjct: 251  KFTRISTNGKQSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSEFVSSRSAQGLSADR 310

Query: 835  AATNSCDALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYS 1014
            AA  SC     D              DF+IDPMCTNCPNLAPKGYE +EEGLWLHCV+YS
Sbjct: 311  AAAKSCS--PPDLISRTSDMANDSNEDFSIDPMCTNCPNLAPKGYEGNEEGLWLHCVKYS 368

Query: 1015 GPDWVYECPYPDWALL 1062
            GPDW+YECP+PDWA L
Sbjct: 369  GPDWIYECPHPDWASL 384


>ref|XP_004235304.1| PREDICTED: RNA pseudourine synthase 7-like [Solanum lycopersicum]
          Length = 383

 Score =  563 bits (1452), Expect = e-158
 Identities = 279/382 (73%), Positives = 307/382 (80%), Gaps = 29/382 (7%)
 Frame = +1

Query: 7    DMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPY 186
            DMEIVWQTPAN PERHDYI RNG R+VKPY+FEFI+HVKNRWAGKTIVDLF++EFKGRP 
Sbjct: 9    DMEIVWQTPANPPERHDYIFRNGVRYVKPYYFEFISHVKNRWAGKTIVDLFSDEFKGRPR 68

Query: 187  DYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVC 366
            DYY SAVK GRIQVDG+ V +SYVVQSSQKISHFLHRHEPPVM WDV IL +E DVLTVC
Sbjct: 69   DYYESAVKSGRIQVDGRKVSVSYVVQSSQKISHFLHRHEPPVMSWDVEILCEEPDVLTVC 128

Query: 367  KPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQ- 543
            KPASVPVHPCGQYRKNTVVGILQAE+ +APLFPVHRLDRLVSGLLILARSAS+ADLFRQ 
Sbjct: 129  KPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSASRADLFRQQ 188

Query: 544  ---------------------QQVVSVNINYNAREGRSTAEVNDCSDNTPA--KGKTACT 654
                                 QQVV+ N+NYNAREGRST EV D   N+ A  KGK ACT
Sbjct: 189  IESGVVQKRYIARVIGVFPEKQQVVNANVNYNAREGRSTVEVGDNQGNSTASLKGKAACT 248

Query: 655  KFMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADR 834
            KF RI+TNG  SIVLC+PVTGRTHQIRVHLQYTGHPIAND+LY+SEFV  R+ +GLSADR
Sbjct: 249  KFTRISTNGKQSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYMSEFVSSRAAEGLSADR 308

Query: 835  AATNSCD-----ALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLH 999
            AA  SC      + TSD   +          DF+IDPMCTNCPNLAPKGYE +EEGLWLH
Sbjct: 309  AAAKSCSPPDPISRTSDMEND-------SNEDFSIDPMCTNCPNLAPKGYEGNEEGLWLH 361

Query: 1000 CVRYSGPDWVYECPYPDWALLT 1065
            CV+YSGPDW+YECP+PDWA L+
Sbjct: 362  CVKYSGPDWIYECPHPDWASLS 383


>ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [Fragaria vesca subsp.
            vesca]
          Length = 383

 Score =  556 bits (1434), Expect = e-156
 Identities = 265/377 (70%), Positives = 302/377 (80%), Gaps = 22/377 (5%)
 Frame = +1

Query: 1    EGDMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGR 180
            E DMEIVWQ+PAN PER DYI RNGRRHV+PY+FEFIAHVKNRWAGKTIVDLF +EFKGR
Sbjct: 7    ETDMEIVWQSPANPPERKDYIFRNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFTDEFKGR 66

Query: 181  PYDYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLT 360
              DYY+SAVKCGRIQVDGQ+VP+S++V+ SQKISHFLHRHEPPVM WDV ILQ E DV+T
Sbjct: 67   NRDYYISAVKCGRIQVDGQLVPVSFIVKPSQKISHFLHRHEPPVMTWDVKILQTEPDVVT 126

Query: 361  VCKPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFR 540
            +CKPASVPVHPCGQYRKNTVVGILQAEH +APLFP+HRLDRLVSGLLILARSA++AD+FR
Sbjct: 127  ICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSAAQADIFR 186

Query: 541  QQ----------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACT 654
            QQ                      QVV  NI++NAREGRS+AEV D   + P KGKTACT
Sbjct: 187  QQIEGGMVHKQYIARVIGEFPEEEQVVDANIDHNAREGRSSAEVGDSCSDAPTKGKTACT 246

Query: 655  KFMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADR 834
            KF RI++NG  SIVLC+PVTGRTHQIRVHLQ+ GHPIAND+LYLS+ V +RS +G+ ADR
Sbjct: 247  KFTRISSNGIQSIVLCEPVTGRTHQIRVHLQHAGHPIANDMLYLSKHVSDRSAEGMGADR 306

Query: 835  AATNSCDALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYS 1014
            AA NS  +  S   +           DF+IDPMCTNCP+LAPKGY+ HEE LWLHC RYS
Sbjct: 307  AAANSDHSPASVVGKIKSTSHEDSSEDFSIDPMCTNCPSLAPKGYDYHEEALWLHCFRYS 366

Query: 1015 GPDWVYECPYPDWALLT 1065
            GP WVYECP+PDWA L+
Sbjct: 367  GPGWVYECPHPDWASLS 383


>gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]
          Length = 399

 Score =  551 bits (1419), Expect = e-154
 Identities = 270/374 (72%), Positives = 297/374 (79%), Gaps = 23/374 (6%)
 Frame = +1

Query: 10   MEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPYD 189
            MEIVWQTPAN PE+HDYI RNGRRHV+PY+FEFIAHVK RWAGKTIVDLFAEEFKGRPY+
Sbjct: 25   MEIVWQTPANPPEKHDYIFRNGRRHVRPYYFEFIAHVKIRWAGKTIVDLFAEEFKGRPYE 84

Query: 190  YYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVCK 369
            YYVSAVKCGRIQVDG++VP+SY+V+SSQKISHFLHRHEPPV+  DV +L KE DV+TV K
Sbjct: 85   YYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVLALDVKVLHKEPDVVTVWK 144

Query: 370  PASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQQ- 546
            PAS PVHPCGQYRKNTVVGILQAEHD+AP+FPVHRLDRLVSGLLILAR+ASKAD FRQQ 
Sbjct: 145  PASAPVHPCGQYRKNTVVGILQAEHDLAPVFPVHRLDRLVSGLLILARNASKADSFRQQI 204

Query: 547  ---------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKFM 663
                                 +VV VNINYNAREGRSTAEV D   +TP KGK A TKF 
Sbjct: 205  EAGKVQKQYVARVIGVFPEHEKVVDVNINYNAREGRSTAEVGDSCCDTPVKGKAASTKFT 264

Query: 664  RINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAAT 843
            RI TNG  SIVLC+PVTGRTHQIRVHLQY GHPIAND LYLS+   +RST+G +ADRAA 
Sbjct: 265  RIATNGIQSIVLCEPVTGRTHQIRVHLQYAGHPIANDTLYLSKEFVDRSTEGTTADRAAA 324

Query: 844  NSCDALT-SDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYSGP 1020
                +L+ S  ++           DF IDPMCTNCPNL PKGY+  EEGLWLHCVRYSGP
Sbjct: 325  GLDRSLSPSSGQDFLRQNEESSTEDFCIDPMCTNCPNLGPKGYDGDEEGLWLHCVRYSGP 384

Query: 1021 DWVYECPYPDWALL 1062
             W YECPYPDWA L
Sbjct: 385  GWAYECPYPDWATL 398


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
            gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
            pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  540 bits (1390), Expect = e-151
 Identities = 260/372 (69%), Positives = 295/372 (79%), Gaps = 23/372 (6%)
 Frame = +1

Query: 16   IVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPYDYY 195
            IVWQTP N P+R DYI  NGRRHV+PY+FEFIAHVKNRWAGKTIVDLFAEEFKGRPY+YY
Sbjct: 21   IVWQTPDNPPQRSDYIFHNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYY 80

Query: 196  VSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVCKPA 375
            V AV+CGRIQVDG++VP+SY+V+SSQKISHFLHRHEPPVM W V +L++E +VLTVCKPA
Sbjct: 81   VDAVECGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMAWGVKVLKEEEEVLTVCKPA 140

Query: 376  SVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQQ--- 546
            SVPVHPCGQYRKNTVVGIL+AEH +APLFP+HRLDRLVSGLLILAR+ASKADLFRQQ   
Sbjct: 141  SVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLILARNASKADLFRQQIES 200

Query: 547  -------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKFMRI 669
                               QVV  NINYN REGRSTAE+ D S +T  KGK A TKF RI
Sbjct: 201  GLVKKQYIARVVGVFPEEEQVVDANINYNPREGRSTAEMVDSSTDTRTKGKAAQTKFTRI 260

Query: 670  NTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAATNS 849
            +++G HSIV C+P+TGRTHQIRVHLQYTG+PIAND LYL++    RS Q  +ADRAA  S
Sbjct: 261  SSDGVHSIVSCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASGRSVQKTTADRAAAIS 320

Query: 850  CDALTSDARENCF-XXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYSGPDW 1026
              +   D +E+C          DF IDPMCTNCPNLAPKGYE  EEGLWLHCV+YSGP W
Sbjct: 321  FCSPARDVQEDCANACKENWSEDFGIDPMCTNCPNLAPKGYEGEEEGLWLHCVQYSGPGW 380

Query: 1027 VYECPYPDWALL 1062
            +YECPYP+WA L
Sbjct: 381  IYECPYPEWASL 392


>ref|XP_007137869.1| hypothetical protein PHAVU_009G162600g [Phaseolus vulgaris]
            gi|561010956|gb|ESW09863.1| hypothetical protein
            PHAVU_009G162600g [Phaseolus vulgaris]
          Length = 379

 Score =  539 bits (1389), Expect = e-151
 Identities = 267/377 (70%), Positives = 296/377 (78%), Gaps = 22/377 (5%)
 Frame = +1

Query: 1    EGDMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGR 180
            E  M+IVWQTPAN P   DY+ RNG R V+PY+FEFIAHVKNRWAGKTIVDLFAEEFKGR
Sbjct: 8    EEGMDIVWQTPANPPHPQDYVFRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGR 67

Query: 181  PYDYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLT 360
            PY+YYVSAVKCGRIQVDG++VP+SYVV+ SQKISHFLHRHEPPVM  DV ILQKE DVLT
Sbjct: 68   PYEYYVSAVKCGRIQVDGEMVPVSYVVRPSQKISHFLHRHEPPVMACDVLILQKEPDVLT 127

Query: 361  VCKPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFR 540
            +CKPASVPVHPCGQYRKNTVVGILQAEH +APLFPVHRLDRLVSGLLILARSA+KAD+FR
Sbjct: 128  ICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARSAAKADIFR 187

Query: 541  QQ----------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACT 654
            QQ                       +V  NI+YNAREGRSTAEV D      AKGK A T
Sbjct: 188  QQIEAGLVHKQYIAKVVGEFPEDELIVDANIDYNAREGRSTAEVRD-----SAKGKAAST 242

Query: 655  KFMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADR 834
            KF RI+TNGT SIVLC+P+TGRTHQIRVHLQY+GHPIAND+LY+SE   +RS +GLSADR
Sbjct: 243  KFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSVKGLSADR 302

Query: 835  AATNSCDALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYS 1014
            +A  S  +LT +  E           DF IDPMCTNCPNL PKGY+ +EEGLWLHC  YS
Sbjct: 303  SARISDVSLTPNFDEVLNACEANSNEDFIIDPMCTNCPNLEPKGYDGNEEGLWLHCFCYS 362

Query: 1015 GPDWVYECPYPDWALLT 1065
            GP W YECPYPDWA L+
Sbjct: 363  GPGWTYECPYPDWAKLS 379


>ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Glycine max]
          Length = 381

 Score =  538 bits (1387), Expect = e-150
 Identities = 265/377 (70%), Positives = 298/377 (79%), Gaps = 23/377 (6%)
 Frame = +1

Query: 1    EGDMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGR 180
            EG   IVWQTPAN P  +DY+ RNG R+V+PY+FEFIAHVKNRWAGKTIVDLFAEEFKGR
Sbjct: 9    EGMDNIVWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGR 68

Query: 181  PYDYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLT 360
            PY+YYVSAVKCGRIQVDG++VP+SY+V+SSQKISHFLHRHEPPVM  +V +LQK+ DVLT
Sbjct: 69   PYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVLQKDIDVLT 128

Query: 361  VCKPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFR 540
            VCKPASVPVHPCGQYRKNTVVGILQAEH + PLFPVHRLDRLVSGLLILAR+A+KAD+FR
Sbjct: 129  VCKPASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARNAAKADIFR 188

Query: 541  QQ----------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACT 654
            QQ                       +V  NI+YNAREGRSTAEV        AKGK A T
Sbjct: 189  QQIEAGLVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRG-----SAKGKAAST 243

Query: 655  KFMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADR 834
            KF RI+TNGT SIVLC+P+TGRTHQIRVHLQY+GHPIAND+LY+SE   +RS +GLSADR
Sbjct: 244  KFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSVKGLSADR 303

Query: 835  AATNSCDALTSDARENCF-XXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRY 1011
            +A  S  +LTS+  E            DF IDPMCTNCPNLAPKGY+  EEGLWLHC+RY
Sbjct: 304  SARISGVSLTSNFNEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEEGLWLHCIRY 363

Query: 1012 SGPDWVYECPYPDWALL 1062
            SGP W YECPYPDWA L
Sbjct: 364  SGPGWTYECPYPDWAKL 380


>gb|EYU43033.1| hypothetical protein MIMGU_mgv1a022495mg [Mimulus guttatus]
          Length = 375

 Score =  535 bits (1378), Expect = e-149
 Identities = 266/380 (70%), Positives = 297/380 (78%), Gaps = 28/380 (7%)
 Frame = +1

Query: 10   MEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPYD 189
            MEIVWQTPAN P+R DYI R+G R+VKPY+FEFI+H KNRWAGKTIVDLFA+EFKGRP D
Sbjct: 12   MEIVWQTPANPPQRQDYIFRDGIRYVKPYYFEFISHAKNRWAGKTIVDLFADEFKGRPRD 71

Query: 190  YYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVCK 369
            YYVSAVK GRIQVDGQIVP+SY+V+SSQKISHFLHRHEPPVM  DV IL  E DVLTV K
Sbjct: 72   YYVSAVKSGRIQVDGQIVPVSYIVRSSQKISHFLHRHEPPVMAMDVQILHTEPDVLTVYK 131

Query: 370  PASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQQ- 546
            PASVPVHPCGQYRKNTVVGIL+AEHD+AP+FP+HRLDRLVSGLLILARSASKAD+FRQQ 
Sbjct: 132  PASVPVHPCGQYRKNTVVGILEAEHDLAPIFPIHRLDRLVSGLLILARSASKADIFRQQI 191

Query: 547  ---------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKFM 663
                                 QV +VNINYNAREG+ST E+ + S     KGK ACTKF 
Sbjct: 192  ESGEIKKQYIAKVVGVFPENEQVANVNINYNAREGKSTVEIENGS-----KGKVACTKFT 246

Query: 664  RINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAAT 843
            RI+TNGT SIVLC+P+TGRTHQIRVHLQ+ GHPIAND+LYLSE V  RS +G SADRAA 
Sbjct: 247  RISTNGTQSIVLCEPITGRTHQIRVHLQFLGHPIANDLLYLSECVPNRSIEGFSADRAAA 306

Query: 844  NSC------DALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCV 1005
             +       D  T D+ E           DF IDPMCTNCP+L+PKGY+  EEGLWLHCV
Sbjct: 307  ANSGLHIKPDNSTDDSAE-----------DFDIDPMCTNCPDLSPKGYDGREEGLWLHCV 355

Query: 1006 RYSGPDWVYECPYPDWALLT 1065
            RYSGPDW YECPYP+WA L+
Sbjct: 356  RYSGPDWTYECPYPNWASLS 375


>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
            gi|355491829|gb|AES73032.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 380

 Score =  532 bits (1371), Expect = e-148
 Identities = 265/374 (70%), Positives = 295/374 (78%), Gaps = 23/374 (6%)
 Frame = +1

Query: 10   MEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPYD 189
            M+IVWQTPAN P   DYI+RNG R V+PY+FEFIAHVKNRWAGKTIVDLFAEEFKGRPY+
Sbjct: 12   MDIVWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYE 71

Query: 190  YYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVCK 369
            YYVSAVKCGRIQVDG++VP+SYVV+SSQKISHFLHRHEPPVM  DV IL KE DVLTVCK
Sbjct: 72   YYVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACDVPILHKEPDVLTVCK 131

Query: 370  PASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQ-- 543
            PASVPVHPCGQYRKNTVVGILQAEH +APLFPVHRLDRLVSGLLI+AR+A+KAD FRQ  
Sbjct: 132  PASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLIIARNATKADSFRQEI 191

Query: 544  --------------------QQVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKFM 663
                                + +V  NI+YNAREGRSTAEV D +     KGK A TKF 
Sbjct: 192  EAGLVKKQYIAKVVGEFPEDEIIVDANIDYNAREGRSTAEVRDST-----KGKVASTKFT 246

Query: 664  RINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAAT 843
            RI++NGTHSIVLC+PVTGRTHQIRVHLQ +GHPIAND+LY+SE   +RS  G +ADR+A 
Sbjct: 247  RISSNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYISEQTVDRSINGSTADRSAC 306

Query: 844  NSCDALTSDARENC-FXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYSGP 1020
             S  +LTS+  E            DF IDPMCTNCPNLAPKGY+  EEGLWLHC+RYSGP
Sbjct: 307  ISDASLTSNFGEKVPKDYQENSNEDFRIDPMCTNCPNLAPKGYDTDEEGLWLHCMRYSGP 366

Query: 1021 DWVYECPYPDWALL 1062
             W YECPYPDWA L
Sbjct: 367  GWTYECPYPDWAKL 380


>ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [Cicer arietinum]
          Length = 380

 Score =  529 bits (1362), Expect = e-147
 Identities = 262/374 (70%), Positives = 292/374 (78%), Gaps = 23/374 (6%)
 Frame = +1

Query: 10   MEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPYD 189
            M+IVWQTPAN P   DYI RNG R+V+PY+FEFIAHVKNRWAGKTIVDLFAEEFKGRPY+
Sbjct: 12   MDIVWQTPANPPLPQDYIFRNGTRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYE 71

Query: 190  YYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVCK 369
            YYVSAVKCGRIQVDG++VP+SY+V+SSQKISHFLHRHEPPVM  DV IL KE DVLT+CK
Sbjct: 72   YYVSAVKCGRIQVDGEMVPVSYLVKSSQKISHFLHRHEPPVMACDVPILHKEPDVLTICK 131

Query: 370  PASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQQ- 546
            PASVPVHPCGQYRKNTVVGILQAEH +APLFPVHRLDRLVSGLLILAR+ +KAD+FRQQ 
Sbjct: 132  PASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARNGTKADIFRQQI 191

Query: 547  ---------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKFM 663
                                  +V  NI+YN REGRSTAEV D      AKGK A TKF 
Sbjct: 192  EAGLVKKQYIAKVVGEFPKDELIVDANIDYNPREGRSTAEVRD-----SAKGKVASTKFT 246

Query: 664  RINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAAT 843
            RI +NGTHSIV C+PVTGRTHQIRVHLQY+GHPIAND+LY+SE   +RS  G +ADR+A 
Sbjct: 247  RIISNGTHSIVSCEPVTGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSINGSTADRSAR 306

Query: 844  NSCDALTSDARENC-FXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYSGP 1020
             +  +LTS+  E            DF  DPMCTNCPNLAPKGY+ +EEGLWLHC RYSGP
Sbjct: 307  IADASLTSNFSEEVPNDCQENSNGDFGFDPMCTNCPNLAPKGYDGNEEGLWLHCFRYSGP 366

Query: 1021 DWVYECPYPDWALL 1062
             W YECPYPDWA L
Sbjct: 367  GWTYECPYPDWAKL 380


>ref|XP_007038074.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508775319|gb|EOY22575.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 396

 Score =  525 bits (1351), Expect = e-146
 Identities = 248/374 (66%), Positives = 292/374 (78%), Gaps = 22/374 (5%)
 Frame = +1

Query: 10   MEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPYD 189
            M+IVWQTPA+   + DYI  NG+R+V+PY+FEF++HV  RW GKTIVDLF +EF+GRP D
Sbjct: 24   MDIVWQTPAHPAHKDDYIFHNGKRYVRPYYFEFVSHVNKRWEGKTIVDLFTQEFRGRPND 83

Query: 190  YYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVCK 369
            YYVSAVKCGRIQVDG+ +P+SY V+  QKISHF+HRHEPPVM WDV+ILQ E DVLTVCK
Sbjct: 84   YYVSAVKCGRIQVDGENIPVSYKVKRCQKISHFVHRHEPPVMAWDVAILQNEPDVLTVCK 143

Query: 370  PASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQ-- 543
            PASVPVHPCGQYRKNTV+GILQAEH ++PL+P+HRLDRLVSGLLI+A++ +KAD+FRQ  
Sbjct: 144  PASVPVHPCGQYRKNTVLGILQAEHGLSPLYPIHRLDRLVSGLLIVAKNPAKADIFRQHI 203

Query: 544  --------------------QQVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTKFM 663
                                +QVV  N++YNAREGRSTAEV   + +T  KGK ACTKF 
Sbjct: 204  EAGLVQKQYVAKVIGVFPECEQVVDANVDYNAREGRSTAEVGISNGDTTLKGKVACTKFT 263

Query: 664  RINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRAAT 843
            RI+TNG HSIVLC+P TGRTHQIRVHLQ TGHPIAND+LYLS+ V +RST G++ADRAA 
Sbjct: 264  RISTNGIHSIVLCEPTTGRTHQIRVHLQCTGHPIANDMLYLSDNVVDRSTLGMTADRAAA 323

Query: 844  NSCDALTSDARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLHCVRYSGPD 1023
             SC    +   EN          DF+IDPMC++CPNLAP GY  HEEGLWLHCVRYSGP 
Sbjct: 324  LSCSCPVTSC-ENHNEEYKVSSEDFSIDPMCSHCPNLAPNGYNGHEEGLWLHCVRYSGPG 382

Query: 1024 WVYECPYPDWALLT 1065
            WVYECPYPDWA L+
Sbjct: 383  WVYECPYPDWASLS 396


>ref|XP_007038073.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508775318|gb|EOY22574.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 426

 Score =  509 bits (1310), Expect = e-141
 Identities = 248/404 (61%), Positives = 292/404 (72%), Gaps = 52/404 (12%)
 Frame = +1

Query: 10   MEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRPYD 189
            M+IVWQTPA+   + DYI  NG+R+V+PY+FEF++HV  RW GKTIVDLF +EF+GRP D
Sbjct: 24   MDIVWQTPAHPAHKDDYIFHNGKRYVRPYYFEFVSHVNKRWEGKTIVDLFTQEFRGRPND 83

Query: 190  YYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTVCK 369
            YYVSAVKCGRIQVDG+ +P+SY V+  QKISHF+HRHEPPVM WDV+ILQ E DVLTVCK
Sbjct: 84   YYVSAVKCGRIQVDGENIPVSYKVKRCQKISHFVHRHEPPVMAWDVAILQNEPDVLTVCK 143

Query: 370  PASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQ-- 543
            PASVPVHPCGQYRKNTV+GILQAEH ++PL+P+HRLDRLVSGLLI+A++ +KAD+FRQ  
Sbjct: 144  PASVPVHPCGQYRKNTVLGILQAEHGLSPLYPIHRLDRLVSGLLIVAKNPAKADIFRQHI 203

Query: 544  --------------------QQVVSVNINYNAREGRSTAE-------------------- 603
                                +QVV  N++YNAREGRSTAE                    
Sbjct: 204  EAGLVQKQYVAKVIGVFPECEQVVDANVDYNAREGRSTAEKRKTRRKMRSVVVIHKSLLC 263

Query: 604  ----------VNDCSDNTPAKGKTACTKFMRINTNGTHSIVLCQPVTGRTHQIRVHLQYT 753
                      V   + +T  KGK ACTKF RI+TNG HSIVLC+P TGRTHQIRVHLQ T
Sbjct: 264  LLCRDFSFSKVGISNGDTTLKGKVACTKFTRISTNGIHSIVLCEPTTGRTHQIRVHLQCT 323

Query: 754  GHPIANDVLYLSEFVKERSTQGLSADRAATNSCDALTSDARENCFXXXXXXXXDFTIDPM 933
            GHPIAND+LYLS+ V +RST G++ADRAA  SC    +   EN          DF+IDPM
Sbjct: 324  GHPIANDMLYLSDNVVDRSTLGMTADRAAALSCSCPVTSC-ENHNEEYKVSSEDFSIDPM 382

Query: 934  CTNCPNLAPKGYEVHEEGLWLHCVRYSGPDWVYECPYPDWALLT 1065
            C++CPNLAP GY  HEEGLWLHCVRYSGP WVYECPYPDWA L+
Sbjct: 383  CSHCPNLAPNGYNGHEEGLWLHCVRYSGPGWVYECPYPDWASLS 426


>sp|Q0E0Y3.2|PUS7_ORYSJ RecName: Full=RNA pseudouridine synthase 7; AltName: Full=RNA
            pseudouridylate synthase 7; AltName: Full=RNA-uridine
            isomerase 7 gi|222622934|gb|EEE57066.1| hypothetical
            protein OsJ_06883 [Oryza sativa Japonica Group]
          Length = 393

 Score =  504 bits (1297), Expect = e-140
 Identities = 248/381 (65%), Positives = 285/381 (74%), Gaps = 28/381 (7%)
 Frame = +1

Query: 4    GDMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRP 183
            G   IVWQTPAN PER DYI R+GRR+V+PY+FEFI+HVKNRWAGKTIVDLF +EFKGRP
Sbjct: 4    GPAGIVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRP 63

Query: 184  YDYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTV 363
             +YYV AVKCGR+QVD Q+V   YVVQSSQKISHFLHRHEPPV+  D++ILQ E+DV+TV
Sbjct: 64   REYYVHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTV 123

Query: 364  CKPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQ 543
            CKPASVPVHPCGQYRKNTVVGILQAEH + PLFPVHRLDRLVSGLLI A++A KA+ FRQ
Sbjct: 124  CKPASVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQ 183

Query: 544  Q----------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTK 657
            Q                      Q V+ N+++NAREGRSTAEV D     P  GK ACTK
Sbjct: 184  QIEASLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTAEVCDGDGKAPI-GKQACTK 242

Query: 658  FMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRA 837
            F RI T+G HSIVLC+PVTGRTHQIRVHL++ G+PIAND +YLSE    RS++G   +RA
Sbjct: 243  FQRICTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRA 302

Query: 838  ATNSCDALTS------DARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLH 999
             T +C   +S      D   N          +F+IDPMCTNCPNLAP GY+  EE LWLH
Sbjct: 303  TTLACSLPSSDPDSCADLGNNDTNEDTEADEEFSIDPMCTNCPNLAPVGYDADEEALWLH 362

Query: 1000 CVRYSGPDWVYECPYPDWALL 1062
            CVRY+GPDW YECPYPDWA L
Sbjct: 363  CVRYTGPDWSYECPYPDWAFL 383


>gb|EEC73258.1| hypothetical protein OsI_07380 [Oryza sativa Indica Group]
          Length = 393

 Score =  504 bits (1297), Expect = e-140
 Identities = 248/381 (65%), Positives = 285/381 (74%), Gaps = 28/381 (7%)
 Frame = +1

Query: 4    GDMEIVWQTPANQPERHDYIIRNGRRHVKPYFFEFIAHVKNRWAGKTIVDLFAEEFKGRP 183
            G   IVWQTPAN PER DYI R+GRR+V+PY+FEFI+HVKNRWAGKTIVDLF +EFKGRP
Sbjct: 4    GPAGIVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRP 63

Query: 184  YDYYVSAVKCGRIQVDGQIVPISYVVQSSQKISHFLHRHEPPVMPWDVSILQKESDVLTV 363
             +YYV AVKCGR+QVD Q+V   YVVQSSQKISHFLHRHEPPV+  D++ILQ E+DV+TV
Sbjct: 64   REYYVHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTV 123

Query: 364  CKPASVPVHPCGQYRKNTVVGILQAEHDMAPLFPVHRLDRLVSGLLILARSASKADLFRQ 543
            CKPASVPVHPCGQYRKNTVVGILQAEH + PLFPVHRLDRLVSGLLI A++A KA+ FRQ
Sbjct: 124  CKPASVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQ 183

Query: 544  Q----------------------QVVSVNINYNAREGRSTAEVNDCSDNTPAKGKTACTK 657
            Q                      Q V+ N+++NAREGRSTAEV D     P  GK ACTK
Sbjct: 184  QIEASLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTAEVCDGDGKAPI-GKQACTK 242

Query: 658  FMRINTNGTHSIVLCQPVTGRTHQIRVHLQYTGHPIANDVLYLSEFVKERSTQGLSADRA 837
            F RI T+G HSIVLC+PVTGRTHQIRVHL++ G+PIAND +YLSE    RS++G   +RA
Sbjct: 243  FQRICTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRA 302

Query: 838  ATNSCDALTS------DARENCFXXXXXXXXDFTIDPMCTNCPNLAPKGYEVHEEGLWLH 999
             T +C   +S      D   N          +F+IDPMCTNCPNLAP GY+  EE LWLH
Sbjct: 303  TTLACSLPSSDPDSCADLGNNDTNKDTEADEEFSIDPMCTNCPNLAPVGYDADEEALWLH 362

Query: 1000 CVRYSGPDWVYECPYPDWALL 1062
            CVRY+GPDW YECPYPDWA L
Sbjct: 363  CVRYTGPDWSYECPYPDWAFL 383