BLASTX nr result
ID: Paeonia22_contig00016601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00016601
(3085 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 1009 0.0
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 1009 0.0
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 932 0.0
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun... 931 0.0
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro... 926 0.0
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro... 922 0.0
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 922 0.0
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr... 913 0.0
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 913 0.0
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 906 0.0
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 903 0.0
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 897 0.0
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas... 892 0.0
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 885 0.0
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana... 882 0.0
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 881 0.0
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 880 0.0
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab... 879 0.0
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me... 879 0.0
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub... 878 0.0
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 1009 bits (2609), Expect = 0.0
Identities = 569/1015 (56%), Positives = 684/1015 (67%), Gaps = 36/1015 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNT---- 2916
SEDEMQ L PAI KPEPLW+GKQVITAVLNHIT+G PFT EK+GKIPREYFGS
Sbjct: 692 SEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKK 751
Query: 2915 ---GEDDLSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELY 2745
G+D S RK L + KN+LVRGVIDKAQF YGLVH VQELY
Sbjct: 752 SGKGKDPGSDRRKEKRIEKKHGEYK----LLIHKNELVRGVIDKAQFDKYGLVHMVQELY 807
Query: 2744 GPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXX 2565
G TAGILLS SRLFTVFLQMHGFTCGVDDLLI DI RK EL+K ++ G
Sbjct: 808 GSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGEL----- 862
Query: 2564 XXXXXKRKDIRNVYSKFLGIKYDEIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLSNA 2385
V+ KF+G + +IDP +L E+E I GE T LD M+ L+
Sbjct: 863 ------------VHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNEL 910
Query: 2384 STEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSG 2205
+++VNKDL +KGL+KPFPKNC SLMTTTGAKG VNF Q+SS LGQQDLEGKRVPRMVSG
Sbjct: 911 TSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSG 970
Query: 2204 KTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 2025
KTLP F PWD + RAGGFISD FLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL
Sbjct: 971 KTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 1030
Query: 2024 IKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHH 1845
IKNLECLKVCYD+TVRD+DGSI+QF+YG+DGVDVHQTSFI++F+AL N +++ EKF
Sbjct: 1031 IKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQD 1090
Query: 1844 LDKSNSYIKHLPPKLEKKAREFIKGVPEKKKHIDD----EDFMKLMNHKYFSSLAQPGEP 1677
K N YI+ LP +L KK ++FI+G E+++ D+ +DF+ L+ KY SSLAQPGEP
Sbjct: 1091 -GKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEP 1149
Query: 1676 VGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLK 1497
VGVLAAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA+ +IKTPIMTCPL
Sbjct: 1150 VGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQM 1209
Query: 1496 EKSTDEIAKGLAQTLKKVTVGDITENIYVGL-----RHHLYSRVYTLVMNLYRPA---SN 1341
+S D+ A+ LA LKKVTV DITE++ V + + H +Y L M LY PA +
Sbjct: 1210 GRSKDD-AERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPH 1268
Query: 1340 SGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVS--G 1167
+GISL+D +ETL FVRELEDAI N + + ++ GI+ F S+S ASKETDE+ S G
Sbjct: 1269 TGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDG 1328
Query: 1166 MRGEENDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEKE 987
+ G D+D D AQKRK+Q++DE+DY D SE EP+EG S G +E
Sbjct: 1329 LAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGD-SEGEPDEGEPSAGLTEE-- 1385
Query: 986 NGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQL 807
+D D ++S N + D D+ S +PS+S+S +
Sbjct: 1386 ----IDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKS----SKNKKAKTEAKRKKRFRA 1437
Query: 806 SRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKI 627
+KD DR+I V +PHILL Q+A A KVYI+S+G I+ CQ I
Sbjct: 1438 IKKDFDRAILV---KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI 1494
Query: 626 DCSNGQVLCH-------SNVSAEEKKRNSALLTAGVD--------XXXXXXXXXXXXXXX 492
DC+ QV+ + N+ EEKK+ AL TAGVD
Sbjct: 1495 DCNKDQVIYYGRDPKKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHA 1554
Query: 491 XXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESV 312
AR +II+EV +VFN+YG+ V+IRHL+LIADFMTHSGGY PM+R GGIAESV
Sbjct: 1555 MLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESV 1614
Query: 311 SPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
SPFSK+TFETASKFIVEAA +G+TD+LES SAR+CLGLPVK+GTGCFD+MQK++I
Sbjct: 1615 SPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1669
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 1009 bits (2609), Expect = 0.0
Identities = 569/1015 (56%), Positives = 684/1015 (67%), Gaps = 36/1015 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNT---- 2916
SEDEMQ L PAI KPEPLW+GKQVITAVLNHIT+G PFT EK+GKIPREYFGS
Sbjct: 763 SEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKK 822
Query: 2915 ---GEDDLSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELY 2745
G+D S RK L + KN+LVRGVIDKAQF YGLVH VQELY
Sbjct: 823 SGKGKDPGSDRRKEKRIEKKHGEYK----LLIHKNELVRGVIDKAQFDKYGLVHMVQELY 878
Query: 2744 GPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXX 2565
G TAGILLS SRLFTVFLQMHGFTCGVDDLLI DI RK EL+K ++ G
Sbjct: 879 GSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGEL----- 933
Query: 2564 XXXXXKRKDIRNVYSKFLGIKYDEIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLSNA 2385
V+ KF+G + +IDP +L E+E I GE T LD M+ L+
Sbjct: 934 ------------VHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNEL 981
Query: 2384 STEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSG 2205
+++VNKDL +KGL+KPFPKNC SLMTTTGAKG VNF Q+SS LGQQDLEGKRVPRMVSG
Sbjct: 982 TSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSG 1041
Query: 2204 KTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 2025
KTLP F PWD + RAGGFISD FLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL
Sbjct: 1042 KTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 1101
Query: 2024 IKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHH 1845
IKNLECLKVCYD+TVRD+DGSI+QF+YG+DGVDVHQTSFI++F+AL N +++ EKF
Sbjct: 1102 IKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQD 1161
Query: 1844 LDKSNSYIKHLPPKLEKKAREFIKGVPEKKKHIDD----EDFMKLMNHKYFSSLAQPGEP 1677
K N YI+ LP +L KK ++FI+G E+++ D+ +DF+ L+ KY SSLAQPGEP
Sbjct: 1162 -GKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEP 1220
Query: 1676 VGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLK 1497
VGVLAAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA+ +IKTPIMTCPL
Sbjct: 1221 VGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQM 1280
Query: 1496 EKSTDEIAKGLAQTLKKVTVGDITENIYVGL-----RHHLYSRVYTLVMNLYRPA---SN 1341
+S D+ A+ LA LKKVTV DITE++ V + + H +Y L M LY PA +
Sbjct: 1281 GRSKDD-AERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPH 1339
Query: 1340 SGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVS--G 1167
+GISL+D +ETL FVRELEDAI N + + ++ GI+ F S+S ASKETDE+ S G
Sbjct: 1340 TGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDG 1399
Query: 1166 MRGEENDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEKE 987
+ G D+D D AQKRK+Q++DE+DY D SE EP+EG S G +E
Sbjct: 1400 LAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGD-SEGEPDEGEPSAGLTEE-- 1456
Query: 986 NGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQL 807
+D D ++S N + D D+ S +PS+S+S +
Sbjct: 1457 ----IDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKS----SKNKKAKTEAKRKKRFRA 1508
Query: 806 SRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKI 627
+KD DR+I V +PHILL Q+A A KVYI+S+G I+ CQ I
Sbjct: 1509 IKKDFDRAILV---KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVI 1565
Query: 626 DCSNGQVLCH-------SNVSAEEKKRNSALLTAGVD--------XXXXXXXXXXXXXXX 492
DC+ QV+ + N+ EEKK+ AL TAGVD
Sbjct: 1566 DCNKDQVIYYGRDPKKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHA 1625
Query: 491 XXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESV 312
AR +II+EV +VFN+YG+ V+IRHL+LIADFMTHSGGY PM+R GGIAESV
Sbjct: 1626 MLNTFGVEAARATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESV 1685
Query: 311 SPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
SPFSK+TFETASKFIVEAA +G+TD+LES SAR+CLGLPVK+GTGCFD+MQK++I
Sbjct: 1686 SPFSKMTFETASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1740
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 932 bits (2409), Expect = 0.0
Identities = 538/1018 (52%), Positives = 654/1018 (64%), Gaps = 39/1018 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SEDE+QTL PAI KP+PLWTGKQVITA+LNHIT HPPFTVEK+ KIP +F S ED
Sbjct: 693 SEDEIQTLPPAIWKPKPLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDK 752
Query: 2903 LSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGPKTAGI 2724
E K+ ++L V KN+LVRGVIDK QFG YGLVHTV EL G TAGI
Sbjct: 753 PCQEEKSDKDAPAEKEPDEEKML-VYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGI 811
Query: 2723 LLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXXXXXKR 2544
LLS SRLFT +LQMHGFTCGVDDLLIL +D ERK++LE C+ G
Sbjct: 812 LLSVLSRLFTAYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEA------------ 859
Query: 2543 KDIRNVYSKFLGIKYDEI--DPKELPNEIEYGICRYGEVGTTSLDNEMRKHLSN-ASTEV 2373
V+ F+GIK ++I DP + IE I G+ LD +M L+ S+ V
Sbjct: 860 -----VHRNFIGIKDEKIKIDPVAMQLNIEKTIRSDGDSALAYLDRQMSNELNTKTSSGV 914
Query: 2372 NKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSGKTLP 2193
+L GLLKP KNC SLMTT+GAKG VNFQQ+SS LGQQ+LEGKRVPRMVSGKTLP
Sbjct: 915 ISNLLSDGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLP 974
Query: 2192 SFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNL 2013
F PWDW+ R+GG+I+D FLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNL
Sbjct: 975 CFHPWDWAARSGGYITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNL 1034
Query: 2012 ECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHHLDKS 1833
ECLK+ YDHTVRDADGS++QF YGEDGVDVHQTSFI+KFK L N ++ ++ L
Sbjct: 1035 ECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQLGAF 1094
Query: 1832 NSYIKHLPPKLEKKAREFIKGVP----EKKKHIDDEDFMKLMNHKYFSSLAQPGEPVGVL 1665
NSYI LP L++KA F+ + ED LM K+ SLAQPGEPVGVL
Sbjct: 1095 NSYISELPEALKEKADRFLDDFSIMGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVL 1154
Query: 1664 AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLKEKST 1485
AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS++IKTPIMTCP L+E T
Sbjct: 1155 AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIKTPIMTCP-LQEGRT 1213
Query: 1484 DEIAKGLAQTLKKVTVGDITENIYV-----GLRHHLYSRVYTLVMNLYRPA---SNSGIS 1329
+E A LA L+KVTV DI E++ V ++ R+Y L M LYRPA + IS
Sbjct: 1214 NEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANIS 1273
Query: 1328 LKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSG--MRGE 1155
++D++ETL + F+RELEDAI N + + R+ GI+ F S+S+AS E DE+V+G E
Sbjct: 1274 VEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDMSHRE 1333
Query: 1154 ENDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLS-----TGFEQEK 990
E DDD D AQKRK Q+TDE+DYDD E+E NEG + +GFE E
Sbjct: 1334 ERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEGESTASEEESGFESEI 1393
Query: 989 ENGNCLDTEMDGDDVSRN--SQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXX 816
+ G+ +TE+ D + N S+ + + ++SP
Sbjct: 1394 DQGD-NETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRK 1452
Query: 815 RQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHC 636
++S KD DR+I V +PHILL ++A AKKVYI++ G IE C
Sbjct: 1453 SRIS-KDFDRAIFV---EARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQC 1508
Query: 635 QKIDCSNGQVLCHS-------NVSAEEKKRNSALLTAGVD--------XXXXXXXXXXXX 501
+ DC QV+ + ++ + K++ AL GVD
Sbjct: 1509 RVTDCKESQVIYYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNN 1568
Query: 500 XXXXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIA 321
ARE+IIRE++HVF SYGI V RHL+LIADFMTH+GGY PMSR GGIA
Sbjct: 1569 IHAMLKTYGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIA 1628
Query: 320 ESVSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
ES+SPFSK++FETASKFIVEAAL+G D+LE+PSAR+CLGLPVK+GTG FD+MQK++I
Sbjct: 1629 ESISPFSKMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLEI 1686
>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
gi|462398594|gb|EMJ04262.1| hypothetical protein
PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 931 bits (2405), Expect = 0.0
Identities = 531/1031 (51%), Positives = 652/1031 (63%), Gaps = 52/1031 (5%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNT--GE 2910
SE MQ L PAI KPEPLWTGKQVITA+LNHIT+G PP TVE++ KIPR +F GE
Sbjct: 603 SEGTMQPLLPAIWKPEPLWTGKQVITALLNHITRGSPPVTVERDAKIPRGFFNCKNVEGE 662
Query: 2909 DDL-----------SVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVH 2763
D S E+ T L + +N+LVRGVIDKAQFG YGLVH
Sbjct: 663 DKSGNDGQQKKRKPSKEQATDKDSSKEKEEPDENHLLIYRNNLVRGVIDKAQFGDYGLVH 722
Query: 2762 TVQELYGPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGX 2583
TVQE YG TAG LLS S LFTV+LQMHGFTCG+DDLL+L+ +D + K +LE C+D G
Sbjct: 723 TVQEFYGSDTAGKLLSVLSHLFTVYLQMHGFTCGIDDLLLLESKDAKMKDQLESCEDVG- 781
Query: 2582 XXXXXXXXXXXKRKDIRNVYSKFLGIK-YDEIDPKELPNEIEYGICRYGEVGTTSLDNEM 2406
NVY F+ +K DP EL IE I GE SLD M
Sbjct: 782 ----------------ENVYRDFIEVKDVKRKDPVELQLNIENFIRSNGESALASLDRRM 825
Query: 2405 RKHLSN--ASTEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEG 2232
L+N ++++V K L ++GL KP KNC LMTT+GAKG + N QQ++S LGQQ+LEG
Sbjct: 826 ISQLNNKTSNSDVFKQLLLRGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQELEG 885
Query: 2231 KRVPRMVSGKTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTS 2052
KRVP+M+SGKTLP F PWDWS RAGGFI D FLTGLHPQEYYFHCMAGREGLVDTAVKTS
Sbjct: 886 KRVPQMISGKTLPCFPPWDWSSRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTS 945
Query: 2051 RSGYLQRCLIKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQ 1872
RSGYLQRC+IKNLECLKV YD+TVRDADGSIIQF YGEDG+DVH TSFI KF++L N +
Sbjct: 946 RSGYLQRCIIKNLECLKVSYDNTVRDADGSIIQFRYGEDGIDVHMTSFIQKFESLIANKE 1005
Query: 1871 ILREKFLHHLDKSNSYIKHLPPKLEKKAREFIKGVPEKKK-HIDDEDFMKLMNHKYFSSL 1695
+ +K +DK N YIK LP L++KA +F+ + K+K H EDF+KLM HKY SL
Sbjct: 1006 MFHKKGRRQMDKLNPYIKDLPLALKEKAEKFVHNLALKEKDHNFQEDFLKLMEHKYLCSL 1065
Query: 1694 AQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIM 1515
AQPGEPVGVLA QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ +IKTP+M
Sbjct: 1066 AQPGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANDIKTPVM 1125
Query: 1514 TCPLLKEKSTDEIAKGLAQTLKKVTVGDITENIYVG-----LRHHLYSRVYTLVMNLYRP 1350
TCPL K +S +E A+ LA LKK+TV DI E++ V ++ R+Y L M L+ P
Sbjct: 1126 TCPLQKGRSKEE-AQELADKLKKITVADIIESMKVTFVPFFIQDGQTCRIYKLEMTLHVP 1184
Query: 1349 ASNSGI---SLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDE 1179
I S +D++E L I FVRELEDAI N I + ++ GI+ F SQ KAS ETDE
Sbjct: 1185 EHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKNFTPDSQPKASNETDE 1244
Query: 1178 ---EVSGMRGEENDDDG---DVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGV 1017
E R EE+DD+G D A KRK Q+TDE+DY+D +DE E
Sbjct: 1245 NLPEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDEMDYEDGCDDEVREAD 1304
Query: 1016 LSTGFEQEKENGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSE------SQSPXXXXX 855
LS G E E +D E + ++ ++ + +D +D+ P E
Sbjct: 1305 LSDGDESE------IDEEENEVEIGKDGEIGVIDANDEMPGSPLEEAGDLAKPKSKEKKT 1358
Query: 854 XXXXXXXXXXXXXRQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAK 675
++ +K+ DR+I V D +PHILL Q+A A+
Sbjct: 1359 KSGSQIRKKRKVRAEMVKKETDRAIFV--SAKGFHFEVHFRFADNEPHILLSQIAQKTAQ 1416
Query: 674 KVYIKSAGDIEHCQKIDCSNGQVLC-------HSNVSAEEKKRNSALLTAGVD------- 537
KVYI+ +G + C++I C QVLC + S++EKK AL T G+D
Sbjct: 1417 KVYIQRSGKVADCKQITCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQL 1476
Query: 536 -XXXXXXXXXXXXXXXXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHS 360
ARE+IIRE+++VF SYGI+V+IRHLTLIADFMTH+
Sbjct: 1477 QDVLDVRYIYSNNIHAMLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHA 1536
Query: 359 GGYNPMSRSGGIAESVSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGT 180
GGY P++R GGI ES+SPF+K+TFETASKFIVEAA +G D LE+PSAR+CLGLPV VGT
Sbjct: 1537 GGYRPLNRFGGIVESISPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGT 1596
Query: 179 GCFDVMQKVDI 147
GCFD+M K+++
Sbjct: 1597 GCFDLMHKMEV 1607
>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
isoform 3 [Theobroma cacao]
Length = 1400
Score = 926 bits (2394), Expect = 0.0
Identities = 532/1022 (52%), Positives = 652/1022 (63%), Gaps = 43/1022 (4%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE+ M + PAILKP+PLWTGKQVI++VL+HIT+G PPFTV K KIPR++F + ++
Sbjct: 408 SEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNK 467
Query: 2903 LSVE---------RKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQE 2751
S +K E + + +NDLVRGVIDKAQF YGLVHTVQE
Sbjct: 468 QSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQE 527
Query: 2750 LYGPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXX 2571
LYG TAGILLS FSRLFTVFLQMHGFTCGVDDLLI++ +DIERK++LE C+
Sbjct: 528 LYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCE-------- 579
Query: 2570 XXXXXXXKRKDIRNVYSKFLGIKYD-EIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHL 2394
K + + + G+K + E P EL EIE I R GE T+LD +M L
Sbjct: 580 ---------KKVTEAHYELFGVKVNSETAPTELQLEIERTIRRDGETALTALDRKMISVL 630
Query: 2393 S-NASTEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPR 2217
+ N+S V +L +GL+K +NC SLMTT+GAKG VNFQQ+SS LGQQ+LEGKRVPR
Sbjct: 631 NENSSKGVLTELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPR 690
Query: 2216 MVSGKTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYL 2037
MVSGKTLP F PWDW+ RAGGFISD FL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYL
Sbjct: 691 MVSGKTLPCFHPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYL 750
Query: 2036 QRCLIKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREK 1857
QRCLIKNLECLK+ YDHTVRDADGSI+QF YGEDG+DVHQTSFI+KF+AL N ++ EK
Sbjct: 751 QRCLIKNLECLKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEK 810
Query: 1856 FLHHLDKSNSYIKHLPPKLEKKAREFIKGVPEKKKH--IDDEDFMKLMNHKYFSSLAQPG 1683
L + + K LP L KA +FI+ +K +H I +DF+ L+ K+ SSLAQPG
Sbjct: 811 LCSQLGEPDDSDKILPDGLRSKAEQFIREEIKKYQHQKIKPKDFLNLLKLKFLSSLAQPG 870
Query: 1682 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPL 1503
EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS++I+TP+MTCPL
Sbjct: 871 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPL 930
Query: 1502 LKEKSTDEIAKGLAQTLKKVTVGDITENIYVGLRHHLYSR-----VYTLVMNLYRP---A 1347
K K T E A LA +KK+TV DI E++ V + +Y L M L +P
Sbjct: 931 HKGK-TKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYF 989
Query: 1346 SNSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSG 1167
NS I++KD + L + F+RELEDAI N + + ++ GI+ F SQ AS E DE+VS
Sbjct: 990 ENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSE 1049
Query: 1166 MRGEE-----NDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGF 1002
R E +DDD D AQK+K+Q+TDE+DY+D SE E NEG
Sbjct: 1050 GRSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAAL 1109
Query: 1001 EQE----KENGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXX 834
E E ++ + M G D ++ ++ SN S +
Sbjct: 1110 ESEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEK--------TGSEP 1161
Query: 833 XXXXXXRQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSA 654
+ RK++DR+I +PHILL Q+A AKKVYI+S
Sbjct: 1162 KRKKMKAKFVRKESDRAI---FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSF 1218
Query: 653 GDIEHCQKIDCSNGQVLCH-----SNVSAEEKKRNSALLTAGVD--------XXXXXXXX 513
G I+ C+ DCS QV + S +K++ AL T GVD
Sbjct: 1219 GKIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYL 1278
Query: 512 XXXXXXXXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRS 333
ARE+IIRE+SHVF SYGI V+IRHLTLIADFMTHSG Y PMSR
Sbjct: 1279 YSNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRL 1338
Query: 332 GGIAESVSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKV 153
GGIAES+SPFSK++FETASKFIVEAA +GL D+LE+PS+R+CLGLPVK+GTG FD+MQKV
Sbjct: 1339 GGIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1398
Query: 152 DI 147
+I
Sbjct: 1399 EI 1400
>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
isoform 4 [Theobroma cacao]
Length = 1397
Score = 922 bits (2383), Expect = 0.0
Identities = 530/1021 (51%), Positives = 650/1021 (63%), Gaps = 42/1021 (4%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE+ M + PAILKP+PLWTGKQVI++VL+HIT+G PPFTV K KIPR++F + ++
Sbjct: 408 SEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNK 467
Query: 2903 LSVE---------RKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQE 2751
S +K E + + +NDLVRGVIDKAQF YGLVHTVQE
Sbjct: 468 QSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQE 527
Query: 2750 LYGPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXX 2571
LYG TAGILLS FSRLFTVFLQMHGFTCGVDDLLI++ +DIERK++LE C+
Sbjct: 528 LYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCE-------- 579
Query: 2570 XXXXXXXKRKDIRNVYSKFLGIKYDEIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLS 2391
K + + + G+K + EL EIE I R GE T+LD +M L+
Sbjct: 580 ---------KKVTEAHYELFGVKVNS--ETELQLEIERTIRRDGETALTALDRKMISVLN 628
Query: 2390 -NASTEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRM 2214
N+S V +L +GL+K +NC SLMTT+GAKG VNFQQ+SS LGQQ+LEGKRVPRM
Sbjct: 629 ENSSKGVLTELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRM 688
Query: 2213 VSGKTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQ 2034
VSGKTLP F PWDW+ RAGGFISD FL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQ
Sbjct: 689 VSGKTLPCFHPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQ 748
Query: 2033 RCLIKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKF 1854
RCLIKNLECLK+ YDHTVRDADGSI+QF YGEDG+DVHQTSFI+KF+AL N ++ EK
Sbjct: 749 RCLIKNLECLKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKL 808
Query: 1853 LHHLDKSNSYIKHLPPKLEKKAREFIKGVPEKKKH--IDDEDFMKLMNHKYFSSLAQPGE 1680
L + + K LP L KA +FI+ +K +H I +DF+ L+ K+ SSLAQPGE
Sbjct: 809 CSQLGEPDDSDKILPDGLRSKAEQFIREEIKKYQHQKIKPKDFLNLLKLKFLSSLAQPGE 868
Query: 1679 PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLL 1500
PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS++I+TP+MTCPL
Sbjct: 869 PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLH 928
Query: 1499 KEKSTDEIAKGLAQTLKKVTVGDITENIYVGLRHHLYSR-----VYTLVMNLYRP---AS 1344
K K T E A LA +KK+TV DI E++ V + +Y L M L +P
Sbjct: 929 KGK-TKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFE 987
Query: 1343 NSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSGM 1164
NS I++KD + L + F+RELEDAI N + + ++ GI+ F SQ AS E DE+VS
Sbjct: 988 NSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEG 1047
Query: 1163 RGEE-----NDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFE 999
R E +DDD D AQK+K+Q+TDE+DY+D SE E NEG E
Sbjct: 1048 RSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALE 1107
Query: 998 QE----KENGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXX 831
E ++ + M G D ++ ++ SN S +
Sbjct: 1108 SEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEK--------TGSEPK 1159
Query: 830 XXXXXRQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAG 651
+ RK++DR+I +PHILL Q+A AKKVYI+S G
Sbjct: 1160 RKKMKAKFVRKESDRAI---FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFG 1216
Query: 650 DIEHCQKIDCSNGQVLCH-----SNVSAEEKKRNSALLTAGVD--------XXXXXXXXX 510
I+ C+ DCS QV + S +K++ AL T GVD
Sbjct: 1217 KIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLY 1276
Query: 509 XXXXXXXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSG 330
ARE+IIRE+SHVF SYGI V+IRHLTLIADFMTHSG Y PMSR G
Sbjct: 1277 SNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLG 1336
Query: 329 GIAESVSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVD 150
GIAES+SPFSK++FETASKFIVEAA +GL D+LE+PS+R+CLGLPVK+GTG FD+MQKV+
Sbjct: 1337 GIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1396
Query: 149 I 147
I
Sbjct: 1397 I 1397
>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 922 bits (2383), Expect = 0.0
Identities = 530/1021 (51%), Positives = 650/1021 (63%), Gaps = 42/1021 (4%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE+ M + PAILKP+PLWTGKQVI++VL+HIT+G PPFTV K KIPR++F + ++
Sbjct: 700 SEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNK 759
Query: 2903 LSVE---------RKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQE 2751
S +K E + + +NDLVRGVIDKAQF YGLVHTVQE
Sbjct: 760 QSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQE 819
Query: 2750 LYGPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXX 2571
LYG TAGILLS FSRLFTVFLQMHGFTCGVDDLLI++ +DIERK++LE C+
Sbjct: 820 LYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCE-------- 871
Query: 2570 XXXXXXXKRKDIRNVYSKFLGIKYDEIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLS 2391
K + + + G+K + EL EIE I R GE T+LD +M L+
Sbjct: 872 ---------KKVTEAHYELFGVKVNS--ETELQLEIERTIRRDGETALTALDRKMISVLN 920
Query: 2390 -NASTEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRM 2214
N+S V +L +GL+K +NC SLMTT+GAKG VNFQQ+SS LGQQ+LEGKRVPRM
Sbjct: 921 ENSSKGVLTELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRM 980
Query: 2213 VSGKTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQ 2034
VSGKTLP F PWDW+ RAGGFISD FL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQ
Sbjct: 981 VSGKTLPCFHPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQ 1040
Query: 2033 RCLIKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKF 1854
RCLIKNLECLK+ YDHTVRDADGSI+QF YGEDG+DVHQTSFI+KF+AL N ++ EK
Sbjct: 1041 RCLIKNLECLKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKL 1100
Query: 1853 LHHLDKSNSYIKHLPPKLEKKAREFIKGVPEKKKH--IDDEDFMKLMNHKYFSSLAQPGE 1680
L + + K LP L KA +FI+ +K +H I +DF+ L+ K+ SSLAQPGE
Sbjct: 1101 CSQLGEPDDSDKILPDGLRSKAEQFIREEIKKYQHQKIKPKDFLNLLKLKFLSSLAQPGE 1160
Query: 1679 PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLL 1500
PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS++I+TP+MTCPL
Sbjct: 1161 PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLH 1220
Query: 1499 KEKSTDEIAKGLAQTLKKVTVGDITENIYVGLRHHLYSR-----VYTLVMNLYRP---AS 1344
K K T E A LA +KK+TV DI E++ V + +Y L M L +P
Sbjct: 1221 KGK-TKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFE 1279
Query: 1343 NSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSGM 1164
NS I++KD + L + F+RELEDAI N + + ++ GI+ F SQ AS E DE+VS
Sbjct: 1280 NSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEG 1339
Query: 1163 RGEE-----NDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFE 999
R E +DDD D AQK+K+Q+TDE+DY+D SE E NEG E
Sbjct: 1340 RSRETKNDDDDDDDDADDEERAEDLGLDAQKQKQQTTDEMDYEDDSEVEQNEGASLAALE 1399
Query: 998 QE----KENGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXX 831
E ++ + M G D ++ ++ SN S +
Sbjct: 1400 SEIDMSEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEK--------TGSEPK 1451
Query: 830 XXXXXRQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAG 651
+ RK++DR+I +PHILL Q+A AKKVYI+S G
Sbjct: 1452 RKKMKAKFVRKESDRAI---FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFG 1508
Query: 650 DIEHCQKIDCSNGQVLCH-----SNVSAEEKKRNSALLTAGVD--------XXXXXXXXX 510
I+ C+ DCS QV + S +K++ AL T GVD
Sbjct: 1509 KIDQCRVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLY 1568
Query: 509 XXXXXXXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSG 330
ARE+IIRE+SHVF SYGI V+IRHLTLIADFMTHSG Y PMSR G
Sbjct: 1569 SNSIHAMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLG 1628
Query: 329 GIAESVSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVD 150
GIAES+SPFSK++FETASKFIVEAA +GL D+LE+PS+R+CLGLPVK+GTG FD+MQKV+
Sbjct: 1629 GIAESISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVE 1688
Query: 149 I 147
I
Sbjct: 1689 I 1689
>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
gi|557523327|gb|ESR34694.1| hypothetical protein
CICLE_v10004132mg [Citrus clementina]
Length = 1715
Score = 913 bits (2360), Expect = 0.0
Identities = 532/1043 (51%), Positives = 655/1043 (62%), Gaps = 64/1043 (6%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE E+ L PAI KPEPLWTGKQVITAVLNHIT+G PPF VE+ GK+P+++F + D
Sbjct: 701 SEQEVLPLLPAIWKPEPLWTGKQVITAVLNHITRGRPPFIVERGGKLPQDFFKTRFNADK 760
Query: 2903 LSV--------------------------------ERKTSXXXXXXXXXXXXEILYVSKN 2820
S E K + E L + KN
Sbjct: 761 QSGRKKNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKN 820
Query: 2819 DLVRGVIDKAQFGSYGLVHTVQELYGPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLIL 2640
DLVRGVIDKAQF YGLVHTVQELYG TAG LLSA SRLFTVFLQMHGFTCGVDDLLIL
Sbjct: 821 DLVRGVIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLIL 880
Query: 2639 KYRDIERKQELEKCQDFGXXXXXXXXXXXXKRKDIRNVYSKFLGIKYD-EIDPKELPNEI 2463
K ++ ERK L ++ G + V+ + L ++ EIDP +L +EI
Sbjct: 881 KDKERERKNHLHGSEEIG-----------------KRVHLEALELEDGAEIDPIKLKSEI 923
Query: 2462 EYGICRYGEVGTTSLDNEMRKHLS-NASTEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGG 2286
E + G+ D +M L+ + S+ V DL +GLLKP KN SLMTT+GAKG
Sbjct: 924 EKAMRGGGDAAVAYFDMKMTSQLNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGS 983
Query: 2285 MVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYY 2106
VNFQQ+SS LGQQ+LEGKRVPRMVSGKTLPSF PWDW+PRAGGFI D FLTGL PQEYY
Sbjct: 984 KVNFQQISSHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYY 1043
Query: 2105 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDHTVRDADGSIIQFSYGEDGVD 1926
FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLK+ YD++VRDADGSI+QF YGEDGVD
Sbjct: 1044 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVD 1103
Query: 1925 VHQTSFISKFKALEENHQILREKFLHHLDKSNSYIKHLPPKLEKKAREFIKGVPEKKKHI 1746
VHQTSFISKF AL N +++ +K LD SN+YI LP L+ A +F +
Sbjct: 1104 VHQTSFISKFDALAANQEMIYKKCSGQLDASNAYIMELPDALKDNAEKFADKF--LSNEM 1161
Query: 1745 DDEDFMKLMNHKYFSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1566
+DF+KL+ HK+ SLAQPGEPVG+LAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1162 AKQDFLKLVKHKFVLSLAQPGEPVGLLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1221
Query: 1565 LQEILMTASVNIKTPIMTCPLLKEKSTDEIAKGLAQTLKKVTVGDITENIYVGLRHHL-- 1392
LQEIL AS +IKTP++TCPLL K+ D+ AK LA LKK+TV DI + I V +R
Sbjct: 1222 LQEILTIASKDIKTPVITCPLLVGKTEDD-AKRLADKLKKITVADIVKKISVKVRAFTSH 1280
Query: 1391 ---YSRVYTLVMNLYRP---ASNSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGI 1230
VY L M LY+P + + I+L+D++E L + FVRELED I N + + +++GI
Sbjct: 1281 DGQACTVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGI 1340
Query: 1229 QAFDQPSQSKASKETDEEVSG----MRGEENDDDGDVSXXXXXXXXXXXAQKRKRQSTDE 1062
+ KAS ETD+E SG RG+ DDD D + A K+K+++TDE
Sbjct: 1341 KNVASGLTQKASNETDQEGSGNVSQCRGD--DDDADDADGEEAEDLGMDAHKQKQRATDE 1398
Query: 1061 VDYDDASEDEPNEGVLSTGFEQEKENGNCLDTEMDGDDVSRNSQDAEMDGD-DDASNLPS 885
DY+D SE E N+GV + GF E + ++E+D D +D + +++ + S
Sbjct: 1399 KDYEDGSEGEMNDGVSAAGFGSEIDQA---ESEIDDDQAETEIEDDRATNEIENSQDQAS 1455
Query: 884 ESQSP--XXXXXXXXXXXXXXXXXXRQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPH 711
E+ P +L +KD DR+I V +P+
Sbjct: 1456 ENLKPFTPKSSKKKSKSKTKRKKARAKLVKKDTDRAIYVAARGMHFEAHFKFI---NEPN 1512
Query: 710 ILLQQVALNVAKKVYIKSAGDIEHCQKIDCSNGQVLCH-------SNVSAEEKKRNSALL 552
ILL Q+A +VAKKVYI+S+G I+ CQ +C QV+ + ++ EEK++ AL
Sbjct: 1513 ILLAQIARHVAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKKREDIKPEEKEKVQALH 1572
Query: 551 TAGVD--------XXXXXXXXXXXXXXXXXXXXXXXXARESIIREVSHVFNSYGITVDIR 396
T GVD ARE+IIRE+ HVF SYGI+V+ R
Sbjct: 1573 TTGVDFHAFWQLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTR 1632
Query: 395 HLTLIADFMTHSGGYNPMSRSGGIAESVSPFSKITFETASKFIVEAALYGLTDDLESPSA 216
HL+LIADFMTHSGGY PMSR GGIAESVSPFSK+TFE ASKFIVEAA YG D L++PSA
Sbjct: 1633 HLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFEIASKFIVEAASYGQVDKLDTPSA 1692
Query: 215 RVCLGLPVKVGTGCFDVMQKVDI 147
R+CLGLPVK+GTG FD+MQK+++
Sbjct: 1693 RICLGLPVKMGTGSFDLMQKLEV 1715
>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
sinensis]
Length = 1715
Score = 913 bits (2359), Expect = 0.0
Identities = 531/1043 (50%), Positives = 656/1043 (62%), Gaps = 64/1043 (6%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE E+ L PAI KPEPLWTGKQVITAVLNHIT+G PPF VE+ GK+P+++F + D
Sbjct: 701 SEQEVLPLLPAIWKPEPLWTGKQVITAVLNHITRGRPPFVVERGGKLPQDFFKTRFNADK 760
Query: 2903 LSV--------------------------------ERKTSXXXXXXXXXXXXEILYVSKN 2820
S E K + E L + KN
Sbjct: 761 QSDRKKNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKN 820
Query: 2819 DLVRGVIDKAQFGSYGLVHTVQELYGPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLIL 2640
DLVRGVIDKAQF YGLVHTVQELYG TAG LLSA SRLFTVFLQMHGFTCGVDDLLIL
Sbjct: 821 DLVRGVIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLIL 880
Query: 2639 KYRDIERKQELEKCQDFGXXXXXXXXXXXXKRKDIRNVYSKFLGIKYD-EIDPKELPNEI 2463
K ++ ERK L ++ G + V+ + L ++ EIDP +L +EI
Sbjct: 881 KDKERERKNHLHGSEEIG-----------------KRVHLEALELEDGAEIDPIKLKSEI 923
Query: 2462 EYGICRYGEVGTTSLDNEMRKHLS-NASTEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGG 2286
E + G+ D +M L+ + S+ V +L +GLLKP KN SLMTT+GAKG
Sbjct: 924 EKAMRGGGDAAVAYFDMKMTSQLNKHTSSSVINELLSEGLLKPTGKNWISLMTTSGAKGS 983
Query: 2285 MVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYY 2106
VNFQQ+SS LGQQ+LEGKRVPRMVSGKTLPSF PWDW+PRAGGFI D FLTGL PQEYY
Sbjct: 984 KVNFQQISSHLGQQELEGKRVPRMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYY 1043
Query: 2105 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDHTVRDADGSIIQFSYGEDGVD 1926
FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLK+ YD++VRDADGSI+QF YGEDGVD
Sbjct: 1044 FHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVD 1103
Query: 1925 VHQTSFISKFKALEENHQILREKFLHHLDKSNSYIKHLPPKLEKKAREFIKGVPEKKKHI 1746
VHQTSFISKF AL N +++ +K LD SN+YI LP L+ A +F +
Sbjct: 1104 VHQTSFISKFDALAANQEMIYKKCSGQLDASNAYIMELPDALKDNAEKFADKF--LSNEM 1161
Query: 1745 DDEDFMKLMNHKYFSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1566
+DF+KL+ HK+ SLAQPGEPVG+LA+QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR
Sbjct: 1162 AKQDFLKLVKHKFVLSLAQPGEPVGLLASQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPR 1221
Query: 1565 LQEILMTASVNIKTPIMTCPLLKEKSTDEIAKGLAQTLKKVTVGDITENIYVGLRHHL-- 1392
LQEIL AS +IKTP++TCPLL K+ D+ AK LA LKK+TV DI + I V +R
Sbjct: 1222 LQEILTIASKDIKTPVITCPLLVGKTEDD-AKRLADKLKKITVADIVKKISVKVRAFTSH 1280
Query: 1391 ---YSRVYTLVMNLYRP---ASNSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGI 1230
VY L M LY+P + + I+L+D++E L + FVRELED I N + + +++GI
Sbjct: 1281 DGQACSVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGI 1340
Query: 1229 QAFDQPSQSKASKETDEEVSG----MRGEENDDDGDVSXXXXXXXXXXXAQKRKRQSTDE 1062
+ KAS ETD++ SG RG+ DDD D + A K+K+++TDE
Sbjct: 1341 KNVASGLTQKASNETDQDGSGNVSQCRGD--DDDADDADGEEAEDLGMDAHKQKQRATDE 1398
Query: 1061 VDYDDASEDEPNEGVLSTGFEQEKENGNCLDTEMDGDDVSRNSQDAEMDGDDDAS-NLPS 885
DY+D SE+E N+GV + GF E + ++E+D D +D + + S + S
Sbjct: 1399 KDYEDGSEEEMNDGVSAAGFGSEIDQA---ESEIDDDQAETEIEDDRATNEIETSQDQAS 1455
Query: 884 ESQSP--XXXXXXXXXXXXXXXXXXRQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPH 711
E+ P +L +KD DR+I V +P+
Sbjct: 1456 ENLKPFTPKSSKKKSKSKSKRKKARAKLVKKDTDRAIYVAARGMHFEAHFKFI---NEPN 1512
Query: 710 ILLQQVALNVAKKVYIKSAGDIEHCQKIDCSNGQVLCH-------SNVSAEEKKRNSALL 552
ILL Q+A +VAKKVYI+S+G I+ CQ +C QV+ + ++ EEK++ AL
Sbjct: 1513 ILLAQIARHVAKKVYIQSSGKIDQCQVTNCKESQVIYYGKDPKTREDIKPEEKEKVQALH 1572
Query: 551 TAGVD--------XXXXXXXXXXXXXXXXXXXXXXXXARESIIREVSHVFNSYGITVDIR 396
T GVD ARE+IIRE+ HVF SYGI+V+ R
Sbjct: 1573 TTGVDFHAFWRLQDFIDVRYIYSNNIQAMLETYGVEAARETIIREIKHVFGSYGISVNTR 1632
Query: 395 HLTLIADFMTHSGGYNPMSRSGGIAESVSPFSKITFETASKFIVEAALYGLTDDLESPSA 216
HL+LIADFMTHSGGY PMSR GGIAESVSPFSK+TFETASKFIVEAA YG D L++PSA
Sbjct: 1633 HLSLIADFMTHSGGYRPMSRLGGIAESVSPFSKMTFETASKFIVEAASYGQVDKLDTPSA 1692
Query: 215 RVCLGLPVKVGTGCFDVMQKVDI 147
R+CLGLPVK+GTG FD+MQK+++
Sbjct: 1693 RICLGLPVKMGTGSFDLMQKLEV 1715
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 906 bits (2341), Expect = 0.0
Identities = 517/1005 (51%), Positives = 650/1005 (64%), Gaps = 29/1005 (2%)
Frame = -3
Query: 3074 EMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDDLSV 2895
EM + PA+ KPEPLWTGKQV+TA+L+HIT+G PPF VEK+ KIPR + + G S
Sbjct: 681 EMLPVLPAVWKPEPLWTGKQVVTALLDHITQGSPPFFVEKDVKIPRGFLILDEGN---SK 737
Query: 2894 ERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGPKTAGILLS 2715
+++ + + L + KN+LVRGVIDKAQFG YGLVHTVQELYG TAG+LLS
Sbjct: 738 KKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLS 797
Query: 2714 AFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXXXXXKRKDI 2535
SRLFTVFLQ HGFTCGVDDLL+++ D ER+++L+ C+ G
Sbjct: 798 VMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIG----------------- 840
Query: 2534 RNVYSKFLGIKYDE-IDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLSN--ASTEVNKD 2364
V+ FL +K E +DP L IE I GE TSLD +M L+ +++V KD
Sbjct: 841 EQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKD 900
Query: 2363 LFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPSFL 2184
L +GLLKP KNC SLMTT+GAKGG NFQQ+SS LGQQ LEGKRVPRMVSGKTLP F
Sbjct: 901 LLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP 960
Query: 2183 PWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECL 2004
PWDW+ RAGGFI D FLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE L
Sbjct: 961 PWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESL 1020
Query: 2003 KVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHHLDKSNSY 1824
K+CYDHTVRDADGS+IQF YGEDGVDVH+T+FI+KF+AL N +L E H L K N +
Sbjct: 1021 KICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVF 1080
Query: 1823 IKHLPPKLEKKAREFIKGVPEKKK---HIDDEDFMKLMNHKYFSSLAQPGEPVGVLAAQS 1653
I LP L +K EFI K K + EDF++L+ +KY SSLAQPGEPVGVLAAQS
Sbjct: 1081 INELPSALREKG-EFIYNSLSKDKVPGLVLKEDFIRLLENKYLSSLAQPGEPVGVLAAQS 1139
Query: 1652 VGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLKEKSTDEIA 1473
+GEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTAS +IKTPIMTCP LKE + ++A
Sbjct: 1140 IGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCP-LKEGYSMDVA 1198
Query: 1472 KGLAQTLKKVTVGDITENIYVGL-----RHHLYSRVYTLVMNLY---RPASNSGISLKDY 1317
KGLA LKK+TV DI E++ V + R +Y L ++ Y A + IS +D
Sbjct: 1199 KGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDL 1258
Query: 1316 KETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSGMRGEENDDDG 1137
+ TL F+ ELE I ++ + +++GI+ F SQSK S E D EVS R EE DDD
Sbjct: 1259 ENTLETVFLEELEGLIEREMVLLSKINGIKXFVPDSQSKGSSEGD-EVSSSRQEEMDDDD 1317
Query: 1136 DVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEKENGNCLDTEMD 957
+ + +K+K Q+ DE+DY+D SED+ N STGFE E + G+ + E+
Sbjct: 1318 EGNDLDVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGD--EAEIT 1375
Query: 956 GDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQLSRKDADRSIE 777
+D+ +D+ + + ++ S+S S +L RK+ DRSI
Sbjct: 1376 NNDMIEIVKDSASENQPEIVDV-SKSMS----KEKTTETSKEKKKVKSELVRKETDRSIF 1430
Query: 776 VXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKIDCSNGQVLCH 597
V +PH LL Q+ A+KV I+ +G I CQ+I C GQV+ H
Sbjct: 1431 V---EAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVIYH 1487
Query: 596 -------SNVSAEEKKRNSALLTAGVD--------XXXXXXXXXXXXXXXXXXXXXXXXA 462
N+ EEK++ AL T+GVD A
Sbjct: 1488 GNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAA 1547
Query: 461 RESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESVSPFSKITFET 282
R +IIRE+ ++F SYGI+V+IRHL+L+AD+MTHSGGY PMSR GGI++S+SPFS++TFET
Sbjct: 1548 RATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFET 1607
Query: 281 ASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
A KFIV+AAL+G D+LE+PS+R+CLGLPVK+GTG FD+MQK+++
Sbjct: 1608 AGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIEV 1652
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 903 bits (2334), Expect = 0.0
Identities = 512/1005 (50%), Positives = 648/1005 (64%), Gaps = 29/1005 (2%)
Frame = -3
Query: 3074 EMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDDLSV 2895
EM + PA+ KPEPLWTGKQV+TA+L+HIT+G PPF VEK+ KIPR +F ++ S
Sbjct: 675 EMLPVLPAVWKPEPLWTGKQVVTALLDHITQGSPPFFVEKDVKIPRGFFKCRDMGNNSSK 734
Query: 2894 ERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGPKTAGILLS 2715
+++ + + L + KN+LVRGVIDKAQFG YGLVHTVQELYG TAG+LLS
Sbjct: 735 KKEHTKVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLS 794
Query: 2714 AFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXXXXXKRKDI 2535
SRLFTVFLQ HGFTCGVDDLL+++ D ER+++L+ C+ G
Sbjct: 795 VMSRLFTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIG----------------- 837
Query: 2534 RNVYSKFLGIKYDE-IDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLSN--ASTEVNKD 2364
V+ FL +K E +DP L IE I GE TSLD +M L+ +++V KD
Sbjct: 838 EQVHLGFLKVKDGEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKD 897
Query: 2363 LFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPSFL 2184
L +GLLKP KNC SLMTT+GAKGG NFQQ+SS LGQQ LEGKRVPRMVSGKTLP F
Sbjct: 898 LLSEGLLKPSVKNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFP 957
Query: 2183 PWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECL 2004
PWDW+ RAGGFI D FLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE L
Sbjct: 958 PWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESL 1017
Query: 2003 KVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHHLDKSNSY 1824
K+CYDHTVRDADGS+IQF YGEDGVDVH+T+FI+KF+AL N +L E H L K N +
Sbjct: 1018 KICYDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVF 1077
Query: 1823 IKHLPPKLEKKAREFIKGVPEKKK---HIDDEDFMKLMNHKYFSSLAQPGEPVGVLAAQS 1653
I LP L +K EFI K K + EDF++L+ +KY SSLAQPGEPVGVLAAQS
Sbjct: 1078 INELPSALREKG-EFIYNSLSKDKVPGLVLKEDFIRLLENKYLSSLAQPGEPVGVLAAQS 1136
Query: 1652 VGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLKEKSTDEIA 1473
+GEPSTQMTLNTFH GRGEMNVTLGI RLQEILMTAS +IKTPIMTCP LKE + ++A
Sbjct: 1137 IGEPSTQMTLNTFHHVGRGEMNVTLGILRLQEILMTASQDIKTPIMTCP-LKEGYSMDVA 1195
Query: 1472 KGLAQTLKKVTVGDITENIYVGL-----RHHLYSRVYTLVMNLY---RPASNSGISLKDY 1317
KGLA LKK+TV DI E++ V + R +Y L ++ Y A + IS +D
Sbjct: 1196 KGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDL 1255
Query: 1316 KETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSGMRGEENDDDG 1137
+ TL F+ ELE I ++ + +++GI+ F SQSK S E DE S + E +DDD
Sbjct: 1256 ENTLETVFLEELEGLIEREMVLLSKINGIKNFVPDSQSKGSSEGDEVSSSRQKENDDDDD 1315
Query: 1136 DVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEKENGNCLDTEMD 957
+ + +K+K Q+ DE+DY+D SED+ N STGFE E + G+ + E+
Sbjct: 1316 EGNDLDVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGD--EAEIT 1373
Query: 956 GDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQLSRKDADRSIE 777
+D+ +D+ + + ++ S+S S +L RK+ DRSI
Sbjct: 1374 NNDMIEIVKDSASENQPEIVDV-SKSMS----KEKTTETSKEKKKVKSELVRKETDRSIF 1428
Query: 776 VXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKIDCSNGQVLCH 597
V +PH LL Q+ A+KV I+ +G I CQ+I C GQV+ H
Sbjct: 1429 V---EAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVIYH 1485
Query: 596 -------SNVSAEEKKRNSALLTAGVD--------XXXXXXXXXXXXXXXXXXXXXXXXA 462
N+ EEK++ AL T+GVD A
Sbjct: 1486 GNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAA 1545
Query: 461 RESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESVSPFSKITFET 282
R +IIRE+ ++F SYGI+V+IRHL+L+AD+MTHSGGY PMSR GGI++S+SPFS++TFET
Sbjct: 1546 RATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFET 1605
Query: 281 ASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
A KFIV+AAL+G D+LE+PS+R+CLGLPVK+GTG FD+MQK+++
Sbjct: 1606 AGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKIEV 1650
>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 897 bits (2318), Expect = 0.0
Identities = 519/1016 (51%), Positives = 640/1016 (62%), Gaps = 37/1016 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE+ M + PAILKP+PLWTGKQVI++VL+HIT+G PPFTV K KIPR++F + ++
Sbjct: 700 SEEGMLPIIPAILKPKPLWTGKQVISSVLSHITRGRPPFTVGKTAKIPRDFFRNRRNKNK 759
Query: 2903 LSVE---------RKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQE 2751
S +K E + + +NDLVRGVIDKAQF YGLVHTVQE
Sbjct: 760 QSSREENQPKNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQE 819
Query: 2750 LYGPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXX 2571
LYG TAGILLS FSRLFTVFLQMHGFTCGVDDLLI++ +DIERK++LE C+
Sbjct: 820 LYGSNTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCE-------- 871
Query: 2570 XXXXXXXKRKDIRNVYSKFLGIKYD-EIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHL 2394
K + + + G+K + E P EL EIE I R GE T+LD +M L
Sbjct: 872 ---------KKVTEAHYELFGVKVNSETAPTELQLEIERTIRRDGETALTALDRKMISVL 922
Query: 2393 S-NASTEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPR 2217
+ N+S V +L +GL+K +NC SLMTT+GAKG VNFQQ+SS LGQQ+LEGKRVPR
Sbjct: 923 NENSSKGVLTELLSEGLVKSMGENCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPR 982
Query: 2216 MVSGKTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYL 2037
MVSGKTLP F PWDW+ RAGGFISD FL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYL
Sbjct: 983 MVSGKTLPCFHPWDWAARAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYL 1042
Query: 2036 QRCLIKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREK 1857
QRCLIKNLECLK+ YDHTVRDADGSI+QF YGEDG+DVHQTSFI+KF+AL N ++ EK
Sbjct: 1043 QRCLIKNLECLKISYDHTVRDADGSIVQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEK 1102
Query: 1856 FLHHLDKSNSYIKHLPPKLEKKAREFIKGVPEKKKH--IDDEDFMKLMNHKYFSSLAQPG 1683
L + + K LP L KA +FI+ +K +H I +DF+ L+ K+ SSLAQPG
Sbjct: 1103 LCSQLGEPDDSDKILPDGLRSKAEQFIREEIKKYQHQKIKPKDFLNLLKLKFLSSLAQPG 1162
Query: 1682 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPL 1503
EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS++I+TP+MTCPL
Sbjct: 1163 EPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPL 1222
Query: 1502 LKEKSTDEIAKGLAQTLKKVTVGDITENIYVGLRHHLYSR-----VYTLVMNLYRP---A 1347
K K T E A LA +KK+TV DI E++ V + +Y L M L +P
Sbjct: 1223 HKGK-TKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYF 1281
Query: 1346 SNSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSG 1167
NS I++KD + L + F+RELEDAI N + + ++ GI+ F SQ AS E DE+VS
Sbjct: 1282 ENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSE 1341
Query: 1166 MRGEE--NDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASED-EPNEGVLSTGFEQ 996
R E NDDD D D+ D ++ +ED + L + +
Sbjct: 1342 GRSRETKNDDDDD---------------------DDDADDEERAEDLGASLAALESEIDM 1380
Query: 995 EKENGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXX 816
++ + M G D ++ ++ SN S +
Sbjct: 1381 SEDETGTIQINMIGSDNGKDEISQSSPNLENRSNPKSREEK--------TGSEPKRKKMK 1432
Query: 815 RQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHC 636
+ RK++DR+I +PHILL Q+A AKKVYI+S G I+ C
Sbjct: 1433 AKFVRKESDRAI---FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQC 1489
Query: 635 QKIDCSNGQVLCH-----SNVSAEEKKRNSALLTAGVD--------XXXXXXXXXXXXXX 495
+ DCS QV + S +K++ AL T GVD
Sbjct: 1490 RVTDCSENQVFYYGEDPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIH 1549
Query: 494 XXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAES 315
ARE+IIRE+SHVF SYGI V+IRHLTLIADFMTHSG Y PMSR GGIAES
Sbjct: 1550 AMLNTYGVEAARETIIREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAES 1609
Query: 314 VSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
+SPFSK++FETASKFIVEAA +GL D+LE+PS+R+CLGLPVK+GTG FD+MQKV+I
Sbjct: 1610 ISPFSKMSFETASKFIVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKVEI 1665
>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
gi|561018822|gb|ESW17626.1| hypothetical protein
PHAVU_007G255400g [Phaseolus vulgaris]
Length = 1637
Score = 892 bits (2306), Expect = 0.0
Identities = 514/1013 (50%), Positives = 649/1013 (64%), Gaps = 34/1013 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE EM PAI KPEPLWTGKQVI+A+L +IT+ PPFTVEK KIP +F + +
Sbjct: 670 SEFEMFLFPPAIWKPEPLWTGKQVISALLYYITRDSPPFTVEKNAKIPSNFFKTQVRDG- 728
Query: 2903 LSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGPKTAGI 2724
+R T + L + KNDLVRGV+DKAQFG YG++HTVQELYG K AG
Sbjct: 729 ---KRHTRDKSRNKVEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGN 785
Query: 2723 LLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXXXXXKR 2544
LLSA SRLFT FLQMHGFTCGVDDL+I + +D+ER +L C++ G
Sbjct: 786 LLSALSRLFTTFLQMHGFTCGVDDLMITEEKDVERMDQLRSCEEIG-------------- 831
Query: 2543 KDIRNVYSKFLGI-KYDEIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHL-SNASTEVN 2370
DI V+ +F+G+ D IDP L IE I GE T LD +M +L S S+ +
Sbjct: 832 -DI--VHREFIGVMNSDIIDPITLQLNIEKKIRSNGEAALTYLDRKMTSNLNSRTSSGIL 888
Query: 2369 KDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPS 2190
KDL G+LKP KNC SLMTT+GAKG MVNFQQ+SS LGQQ+LEGKRVPRMVSGKTLP
Sbjct: 889 KDLLSDGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPC 948
Query: 2189 FLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 2010
F PWD SPRAGGFI D FLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE
Sbjct: 949 FAPWDCSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLE 1008
Query: 2009 CLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHHLDKSN 1830
CLKVCYDHTVRDADGSIIQF YGEDGVDVH TSFI+KF+AL N +++ LD+S+
Sbjct: 1009 CLKVCYDHTVRDADGSIIQFHYGEDGVDVHHTSFINKFEALSTNKELVYGNCCRQLDRSS 1068
Query: 1829 SYIKHLPPKLEKKAREFIKGVPEKKK--HIDDEDFMKLMNHKYFSSLAQPGEPVGVLAAQ 1656
YI LP L++KA F + +++ + +F+KLM HKY S LAQPGE VGVLA+Q
Sbjct: 1069 PYINKLPDALKEKAENFFRDSLKQRNLGSLKRAEFLKLMEHKYVSCLAQPGESVGVLASQ 1128
Query: 1655 SVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLKEKSTDEI 1476
SVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEI+M A+ +IKTP MTCPL KS +E
Sbjct: 1129 SVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEE- 1187
Query: 1475 AKGLAQTLKKVTVGDITEN-----IYVGLRHHLYSRVYTLVMNLYRP---ASNSGISLKD 1320
A LA LKK+TV DI ++ + V + +Y LVM LY+P S I+L+D
Sbjct: 1188 AICLADKLKKITVADIIKSMKVSVVPVSVLGGQVCSIYKLVMKLYKPKQYPKYSDITLED 1247
Query: 1319 YKETLTIQFVRELEDAIHNQINAIKRMHGIQAF--DQPSQSKASKE-----TDEEVSGMR 1161
+++TL I FVRELEDAI N + + ++ GI+ F D S S +S++ ++ E G
Sbjct: 1248 WEDTLRISFVRELEDAIENHMALLSKISGIKKFKTDPQSHSNSSEDAHGNGSESETKGKS 1307
Query: 1160 GEENDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEKENG 981
+++DDD V AQKRKRQ TDEVDY+D E+E ++GVLS E +++N
Sbjct: 1308 NDDDDDDDVVEDTEGYEDLGSDAQKRKRQGTDEVDYEDGPEEETHDGVLSEEIENDEDNV 1367
Query: 980 NCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQLSR 801
+ D+++ ++ D+E G D+ SES+S + +
Sbjct: 1368 D--------DNMTLDASDSE--GLDEL----SESKS------IFEKDSLKREKKKSRPTT 1407
Query: 800 KDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKIDC 621
+ DR++ V +P ILL ++AL AKKV I+++G + C+ + C
Sbjct: 1408 RKYDRAVFVKAKGMHFQIHFKFTG---EPDILLAEIALRSAKKVCIQNSGRVGECKAVTC 1464
Query: 620 SNGQVLCH-------SNVSAEEKKRNSALLTAGV--------DXXXXXXXXXXXXXXXXX 486
V+ + ++ A K++ AL T+GV
Sbjct: 1465 KESGVMYYGEDSRKRDDIPASVKEKIPALQTSGVHFKTFWELQDDLDVRYIYSNNVHAML 1524
Query: 485 XXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESVSP 306
ARE+IIREV +VF SYGI+V+IRHLTLIADFMTHSGGY PM+R+G IA+ SP
Sbjct: 1525 NAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGGYRPMNRNGSIADCTSP 1584
Query: 305 FSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
F K+ FETASKFIVEAA +G D+LE+PS+R+CLGLPVK+GTGC D++QK++I
Sbjct: 1585 FIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGLPVKMGTGCHDLIQKLEI 1637
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 885 bits (2286), Expect = 0.0
Identities = 510/1013 (50%), Positives = 631/1013 (62%), Gaps = 34/1013 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE EM PAI KPEPLWTGKQVI+A+L +IT+G PPFT EK KIP +F + +
Sbjct: 682 SESEMFLFPPAIWKPEPLWTGKQVISALLYYITRGSPPFTAEKNAKIPSNFFKTQIRKGK 741
Query: 2903 LSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGPKTAGI 2724
E + L + KNDLVRGV+DKAQFG YG++HTVQELYG AG
Sbjct: 742 RYTEDTSKKKDKPDEDK-----LLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGN 796
Query: 2723 LLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXXXXXKR 2544
LLSA SRLFT FLQMHGFTCGVDDL++ + +D+ER +L+ C+ G
Sbjct: 797 LLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGD------------- 843
Query: 2543 KDIRNVYSKFLGIKY-DEIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHL-SNASTEVN 2370
+V+ +F+G+K D IDP L IE I GE T LD +M +L S S+ +
Sbjct: 844 ----SVHREFIGVKNSDNIDPVTLQLNIEKKIRSNGEAALT-LDRKMTSNLNSRTSSGIL 898
Query: 2369 KDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPS 2190
K L +G+LKP KNC SLMTT+GAKG MVNFQQ+SS LGQQ+LEGKRVPRMVSGKTLP
Sbjct: 899 KKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPC 958
Query: 2189 FLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 2010
F PWD SPRAGGFI D FLT LHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE
Sbjct: 959 FPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLE 1018
Query: 2009 CLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHHLDKSN 1830
CLKVCYDHTVRDADGSIIQF YGEDGVDVHQTSFI++F AL N +++ + LD+S+
Sbjct: 1019 CLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDRSS 1078
Query: 1829 SYIKHLPPKLEKKAREFIKGVPEKKKHIDDEDFMKLMNHKYFSSLAQPGEPVGVLAAQSV 1650
YI LP LE KA +F K ++ DF++LM HKY S LAQPGEPVGVLA+QSV
Sbjct: 1079 PYINKLPEALEGKAEKFSK--QRNLGSMEQADFLRLMEHKYVSCLAQPGEPVGVLASQSV 1136
Query: 1649 GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLKEKSTDEIAK 1470
GEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEILM A+ +IKTP MTCPL +KS + A
Sbjct: 1137 GEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMTCPLRHDKSMKD-AI 1195
Query: 1469 GLAQTLKKVTVGDITENIYVGL-----RHHLYSRVYTLVMNLYRPASN---SGISLKDYK 1314
LA LKK+TV DI +++ V + +Y LVM LY+ + I+L D++
Sbjct: 1196 CLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSKQYPEYTDITLDDWE 1255
Query: 1313 ETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSG-----MRGEEN 1149
ETL + FVRELEDAI N + + ++ GI+ F QS S +++ S +G+ N
Sbjct: 1256 ETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSESEKKGQNN 1315
Query: 1148 DDD----GDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEKENG 981
DDD G V AQKRK Q TDEVDY+D E+E ++G LS E ++
Sbjct: 1316 DDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGPEEETHDGELSEEIEGDE--- 1372
Query: 980 NCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQLSR 801
DG DV N + +++ L S+S + +
Sbjct: 1373 -------DGSDVDANENYNNVTDANNSEGLEKPSKSKTIDEKQNLKREKKKS----EPTT 1421
Query: 800 KDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKIDC 621
K DR+I V +PHILL Q+A AKKV I++ G + C+ I C
Sbjct: 1422 KKYDRAIFVEAKGKHFEIHFRFTG---EPHILLTQIAQRTAKKVCIQNFGKVGECKAITC 1478
Query: 620 SNGQVLCHS-------NVSAEEKKRNSALLTAGV--------DXXXXXXXXXXXXXXXXX 486
V+ + +SA EK++ AL T+GV +
Sbjct: 1479 KESGVIYYGKDGRKRIEISASEKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAML 1538
Query: 485 XXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESVSP 306
ARE+IIREV +VF SYGI+V+IRHLTLIADFMTH+G Y PM+R+G IA+S SP
Sbjct: 1539 NAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSP 1598
Query: 305 FSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
F K+ FETA FIVEAA +G D+LE+PSAR+CLGLPVK+GTGC D++QK++I
Sbjct: 1599 FIKMCFETAGNFIVEAAYHGQVDNLETPSARICLGLPVKMGTGCHDLIQKLEI 1651
>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
190K chain-like protein [Arabidopsis thaliana]
gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
[Arabidopsis thaliana]
Length = 1670
Score = 882 bits (2278), Expect = 0.0
Identities = 514/1015 (50%), Positives = 646/1015 (63%), Gaps = 36/1015 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGE-- 2910
S+ E+ T+ PAILKP PLWTGKQVITAVLN ITKGHPPFTVEK K+P ++F + E
Sbjct: 697 SDAELLTVTPAILKPVPLWTGKQVITAVLNQITKGHPPFTVEKATKLPVDFFKCRSREVK 756
Query: 2909 ---DDLSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGP 2739
DL+ +++ L++ KN+ V GVIDKAQF YGLVHTV ELYG
Sbjct: 757 PNSGDLTKKKEIDESWKQNLNEDK---LHIRKNEFVCGVIDKAQFADYGLVHTVHELYGS 813
Query: 2738 KTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXX 2559
AG LLS FSRLFTVFLQ HGFTCGVDDL+ILK D ER ++L++C++ G
Sbjct: 814 NAAGNLLSVFSRLFTVFLQTHGFTCGVDDLIILKDMDEERTKQLQECENVG--------- 864
Query: 2558 XXXKRKDIRNVYSKFLGIKYD-EIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLSNAS 2382
V K GI D +IDP+++ + IE + GE SLD + +L+ S
Sbjct: 865 --------ERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNYLNQCS 916
Query: 2381 TE-VNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSG 2205
++ V DL GLLK +NC SLMT +GAKG VNFQQ+SS LGQQDLEGKRVPRMVSG
Sbjct: 917 SKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSG 976
Query: 2204 KTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 2025
KTLP F PWDWSPRAGGFISD FL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL
Sbjct: 977 KTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 1036
Query: 2024 IKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHH 1845
+KNLE LKV YD TVRDADGSIIQF YGEDGVDVH++SFI KFK L N ++ +K
Sbjct: 1037 MKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKELTINQDMVLQKCSED 1096
Query: 1844 -LDKSNSYIKHLPPKLEKKAREFIKGVPEKK----KHIDDEDFMKLMNHKYFSSLAQPGE 1680
L ++SYI LP L+K A +F++ +P + K + E+ +KL+ K+F+SLAQPGE
Sbjct: 1097 MLSGASSYISDLPISLKKGAEKFVEAMPMNERIASKFVRQEELLKLVKSKFFASLAQPGE 1156
Query: 1679 PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLL 1500
PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ NIKTPIMTCPLL
Sbjct: 1157 PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLL 1216
Query: 1499 KEKSTDEIAKGLAQTLKKVTVGDITENIYVG-LRHHLYSR----VYTLVMNLYRP---AS 1344
K K T E A + L+K+TV DI +++ + + + +Y ++ L +NLY+P
Sbjct: 1217 KGK-TKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPEHYPK 1275
Query: 1343 NSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSGM 1164
++ I+ +D++ET+ F+R+LEDAI + + R+ GI + + A ETD + S +
Sbjct: 1276 HTDITEEDWEETMRAVFLRKLEDAIETHMKMLHRIRGIH--NDVTGPIAGNETDNDDS-V 1332
Query: 1163 RGEENDDDG-DVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEKE 987
G++N+DDG D AQK+K+Q TDE+DY++ SEDE NE +G E
Sbjct: 1333 SGKQNEDDGDDDGEGTEVDDLGSDAQKQKKQETDEMDYEENSEDETNEPSSISGVE---- 1388
Query: 986 NGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQL 807
D EMD + ++D E+ +D ES P R+
Sbjct: 1389 -----DPEMDSE-----NEDTEV-SKEDTPEPQEESMEPQKEVKGVKNVKEQSKKKRRKF 1437
Query: 806 SRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKI 627
R +DR I V +DPHILL Q+A A+KVYI+++G IE C
Sbjct: 1438 VRAKSDRHIFV--KGEGEKFEVHFKFATDDPHILLAQIAQQTAQKVYIQNSGKIERCTVA 1495
Query: 626 DCSNGQVLCHSN-------VSAEEKKRNSALLTAGVD--------XXXXXXXXXXXXXXX 492
+C + QV+ H + +S +EKK + AL +GVD
Sbjct: 1496 NCGDPQVIYHGDNPKERREISNDEKKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHD 1555
Query: 491 XXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESV 312
ARE+IIRE++HVF SYGI+V IRHL LIAD+MT SGGY PMSR GGIAES
Sbjct: 1556 MLNIFGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAEST 1615
Query: 311 SPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
SPF ++TFETA+KFIV+AA YG D LE+PSAR+CLGLP GTGCFD+MQ+V++
Sbjct: 1616 SPFCRMTFETATKFIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRVEL 1670
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 881 bits (2276), Expect = 0.0
Identities = 508/1021 (49%), Positives = 642/1021 (62%), Gaps = 43/1021 (4%)
Frame = -3
Query: 3080 EDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDDL 2901
E +QT+ PA+ KP+PLWTGKQVITA+LNH+T G PP TV+ +GKIP YF S + +
Sbjct: 701 EGVVQTVLPAVWKPKPLWTGKQVITALLNHLTNGCPPCTVKNKGKIPYAYFLSESRLVEY 760
Query: 2900 SVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGPKTAGIL 2721
+ + KN+LVRGVIDKAQFG +GLVHT+QELYG AGIL
Sbjct: 761 QSREEQEDRTAENE-------FLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGIL 813
Query: 2720 LSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXXXXXKRK 2541
LSA SRLFT+FLQ+HGFTCG+DDL+IL + DI RK+ELE D G
Sbjct: 814 LSALSRLFTIFLQLHGFTCGIDDLVILPHYDIRRKEELEG-DDVG--------------- 857
Query: 2540 DIRNVYSKFLGIKYDEIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLSNASTEVNKDL 2361
+ F+ K EI P EL EIE I EV T +LD +M+ L+N ++ NK+L
Sbjct: 858 --EEAHCDFVKFKRGEIGPLELQLEIEKAISSNKEVATAALDMKMKNKLANKGSQFNKEL 915
Query: 2360 FVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPSFLP 2181
+KGLLKPFP+NC +LMT TGAKG VNFQQ+SS LGQQ+LEGKRVPRMVSGKTLP F
Sbjct: 916 LLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPA 975
Query: 2180 WDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLK 2001
WD + RAGG++SD FL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE LK
Sbjct: 976 WDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLK 1035
Query: 2000 VCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHHLDKSNSYI 1821
VCYD+TVRDADGSIIQF YGEDGVDVH+TSF+ FKAL+ N + + +K L H K NSYI
Sbjct: 1036 VCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKALKNNQETICQK-LRHGCKLNSYI 1094
Query: 1820 KHLPPKLEKKAREFIK----------GVPEKKKHI------DDEDFMKLMNHKYFSSLAQ 1689
+ LP L +K + F + G+ KK+ + ++ DF++L+ KYFSSLA
Sbjct: 1095 EKLPDGLGEKVKHFWESKTKKLEKKLGMLVKKEEMVKQLKEEEADFLELVGQKYFSSLAD 1154
Query: 1688 PGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTC 1509
GEPVGVLA QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS IKTPIMTC
Sbjct: 1155 SGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEAIKTPIMTC 1214
Query: 1508 PLLKEKSTDEIAKGLAQTLKKVTVGDITENIYV-----GLRHHLYSRVYTLVMNLYRPAS 1344
P L KS ++ A+ L +KK+TV D+ E++ V + +H S++Y L + L +
Sbjct: 1215 PFLGWKSKND-AQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKK--- 1270
Query: 1343 NSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSGM 1164
+ +S +D + TL F+RELEDAI + + + +++GIQ F S+S S ET+E S
Sbjct: 1271 HDFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASST 1330
Query: 1163 RGEEND-DDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEK- 990
R EE DD D AQKRK+Q+TDE+DYDD ++ E + E EK
Sbjct: 1331 RREEEMLDDDDDDEDERTEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKS 1390
Query: 989 ------ENGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXX 828
+NG D E +GD + ++D SN +
Sbjct: 1391 EQTDEIDNG---DEEENGDRGNEEHTSKLQSTEEDISNTKTSKSK--------TKTTVKQ 1439
Query: 827 XXXXRQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGD 648
+ S+KD+DR + V +PHILL QVA AKKVY+K++G
Sbjct: 1440 KKKKERRSKKDSDRCVFVDVEGLHFEVHFRFV---NEPHILLAQVAQKTAKKVYVKNSGK 1496
Query: 647 IEHCQ--KIDCSNGQVLCHSNVSAEEKKRNS----ALLTAGVD--------XXXXXXXXX 510
I+ C+ K + + V+ N + ++++ + AL AGVD
Sbjct: 1497 IDQCRMVKYEVTENTVMWDENQTKQQRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIY 1556
Query: 509 XXXXXXXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSG 330
AR SI+REV VF YG+ +D RHL+LIADFMTH+GGY PMSR G
Sbjct: 1557 TNNIRAMLNTYGVEAARASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHG 1616
Query: 329 GIAESVSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVD 150
I+ES+SPF K++FETASKFIVEAA +GLTD+LE+PS+R+CLGLPVK+GTGCFD+MQ++D
Sbjct: 1617 SISESLSPFLKMSFETASKFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQELD 1676
Query: 149 I 147
I
Sbjct: 1677 I 1677
>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1650
Score = 880 bits (2273), Expect = 0.0
Identities = 509/1011 (50%), Positives = 633/1011 (62%), Gaps = 33/1011 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
S+ EM PAI KPEPLWTGKQVI+A+L +ITKG PPFTVEK KIP +F + E
Sbjct: 673 SDSEMFLFPPAIFKPEPLWTGKQVISALLYYITKGSPPFTVEKNAKIPSSFFKTRMREG- 731
Query: 2903 LSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGPKTAGI 2724
+K + + L + +NDLVRGV+DKAQFG YG+VHTVQE YG TAGI
Sbjct: 732 ----KKRTKDTSIKKDEPDEDKLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGI 787
Query: 2723 LLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXXXXXKR 2544
LLSA SRLFT FLQMHGFTCGVDDLL+ + +D ER +LE C++ G
Sbjct: 788 LLSALSRLFTNFLQMHGFTCGVDDLLLTEGKDSERTNQLESCEEIG-------------- 833
Query: 2543 KDIRNVYSKFLGI-KYDEIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHL-SNASTEVN 2370
DI V+ +F+G+ + D IDP + +E I GE T LD +M +L S ST V
Sbjct: 834 -DI--VHREFIGVMEGDNIDPITMQLNVEKKIRSNGEAAITYLDRKMISNLNSRTSTGVL 890
Query: 2369 KDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPS 2190
K L +G+LKP KN SLMTT+GAKG MVNFQQ+SS LGQQ+LEGKRVPRMVSGKTLP
Sbjct: 891 KVLLSEGILKPSGKNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPC 950
Query: 2189 FLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 2010
F WD SPRAGGFI D FLT L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE
Sbjct: 951 FTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLE 1010
Query: 2009 CLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHHLDKSN 1830
CLKVCYDHTVRDADGSIIQF YGEDGVDVHQTSFI+KF+AL N +++ LDKS+
Sbjct: 1011 CLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFINKFEALSTNKELVYSNCCRELDKSS 1070
Query: 1829 SYIKHLPPKLEKKAREFIKGVPEKKKH---IDDEDFMKLMNHKYFSSLAQPGEPVGVLAA 1659
YI LP L+ KA +FI K+++ + +F+ LM HKY SSLAQPGEPVGVLA+
Sbjct: 1071 PYINKLPDALKGKAEKFILDSSSKQRNSGSMTHTNFLHLMEHKYVSSLAQPGEPVGVLAS 1130
Query: 1658 QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLKEKSTDE 1479
QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEIL AS +IKTP MTCPL KS ++
Sbjct: 1131 QSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILTAASAHIKTPFMTCPLRPNKSMED 1190
Query: 1478 IAKGLAQTLKKVTVGDITENIYVG-----LRHHLYSRVYTLVMNLYRP---ASNSGISLK 1323
+ LA +KK+TV DI E++ V ++ +Y L+M L++P + ++LK
Sbjct: 1191 AIR-LADKMKKITVADIIESMKVSVVPVTVQDGRICSIYKLMMKLHKPKHYPKYTDVTLK 1249
Query: 1322 DYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVS-GMRGEEND 1146
D++ETL + FVR LEDAI N I + ++ GI F +Q +S +++ S G +++D
Sbjct: 1250 DWEETLRVSFVRGLEDAIENNIALLAKISGITNFKTDAQPNSSNGAEDDPSNGKTNDDDD 1309
Query: 1145 DDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEP-NEGVLS---TGFEQEKENGN 978
DDGD AQK KRQ D+VDYDD E+E +G LS G E K+N
Sbjct: 1310 DDGDADDTEGAEDLGLDAQKSKRQVVDDVDYDDGPEEETLEDGELSEDLEGVEDAKDNEY 1369
Query: 977 CLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQLSRK 798
D DGD D + GD+D S++ + +S+K
Sbjct: 1370 VKD---DGD----GKDDEDGKGDEDGSDIEVNENDKKVTLGANYSQGPEENSKSQPVSKK 1422
Query: 797 DADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKIDCS 618
DR + V +PHILL Q+A A+KV I++ G + C+ I C
Sbjct: 1423 -FDRRVYVKFEKRHFEIHFKFTG---EPHILLAQIAQKTAEKVCIQNFGKVGQCKAITCK 1478
Query: 617 NGQVLCH-------SNVSAEEKKRNSALLTAGV--------DXXXXXXXXXXXXXXXXXX 483
V+ + + + K++ AL T+G+
Sbjct: 1479 ESGVIYYGEDDSKREEIPSSVKEKIPALQTSGIHFKSFWEMQDDLNVRYVYSNNVHAILS 1538
Query: 482 XXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESVSPF 303
A+E+IIREV +VF SYGI+V+IRHL LIADFMTHSG Y PMSR G IA+S SPF
Sbjct: 1539 TYGVEAAKETIIREVQNVFKSYGISVNIRHLMLIADFMTHSGCYRPMSRKGSIADSTSPF 1598
Query: 302 SKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVD 150
KI FETAS FIVEAA +G D+L+SPSAR+CLGLPVK+GTGC +++QK++
Sbjct: 1599 LKICFETASNFIVEAACHGQVDNLDSPSARICLGLPVKMGTGCHELIQKLE 1649
>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
Length = 1678
Score = 879 bits (2270), Expect = 0.0
Identities = 510/1016 (50%), Positives = 642/1016 (63%), Gaps = 37/1016 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGE-- 2910
S+ E+ T+ PAILKP PLWTGKQVITAVLN ITKGHPPFTVEK K+P ++F + E
Sbjct: 699 SDAELLTVTPAILKPVPLWTGKQVITAVLNQITKGHPPFTVEKATKLPVDFFKCRSREVK 758
Query: 2909 ---DDLSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGP 2739
DL+ ++K L + KN+ V GVIDKAQF YGLVHTV ELYG
Sbjct: 759 PNSGDLTKKKKIDESWKQNLNEDK---LLIRKNEFVCGVIDKAQFADYGLVHTVHELYGS 815
Query: 2738 KTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXX 2559
AG LLS FSRLFTVFLQ+HGFTCGVDDL+ILK D ER ++L++C++ G
Sbjct: 816 NAAGNLLSVFSRLFTVFLQIHGFTCGVDDLIILKDMDEERTKQLQECENVG--------- 866
Query: 2558 XXXKRKDIRNVYSKFLGIKYD-EIDPKELPNEIEYGICRYGEVGTTSLDNEMRKHLSNAS 2382
V K GI D +IDP+++ + IE + GE SLD + L+ S
Sbjct: 867 --------ERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNDLNQCS 918
Query: 2381 TE-VNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSG 2205
++ V DL GLLK NC SLMT +GAKG VNFQQ+SS LGQQDLEGKRVPRMVSG
Sbjct: 919 SKGVMNDLLSDGLLKTPGMNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSG 978
Query: 2204 KTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 2025
KTLP F PWDWSPRAGGFISD FL+GL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL
Sbjct: 979 KTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL 1038
Query: 2024 IKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHH 1845
+KNLE LK+ YD TVRDADGSIIQF YGEDGVDVH++SFI KFK L N ++ ++
Sbjct: 1039 MKNLESLKINYDCTVRDADGSIIQFQYGEDGVDVHRSSFIEKFKELAINQDMVLQRCSED 1098
Query: 1844 -LDKSNSYIKHLPPKLEKKAREFIKGVPEKK----KHIDDEDFMKLMNHKYFSSLAQPGE 1680
L +NSYI LP L+ A +F++ +P + K + E+ +KL+ K+F+SLAQPGE
Sbjct: 1099 MLSGANSYISDLPISLKNGAEKFVEAMPMNERIASKFVRQEELLKLVKSKFFASLAQPGE 1158
Query: 1679 PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLL 1500
PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA+ +IKTPIMTCPLL
Sbjct: 1159 PVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMTCPLL 1218
Query: 1499 KEKSTDEIAKGLAQTLKKVTVGDITENI------YVGLRHHLYSRVYTLVMNLYRPA--- 1347
K K T E A + L+K+TV DI +++ Y ++ + S ++ L +NLY+P
Sbjct: 1219 KGK-TKEDANDITGKLRKITVADIIKSMDLSVVPYTVYKNEVCS-IHKLKINLYKPEHYP 1276
Query: 1346 SNSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEEVSG 1167
++ I+ KD++ET+T+ F+R+LEDAI + + R+ GI P +A ETD + S
Sbjct: 1277 KHTDITEKDWEETMTVVFLRKLEDAIEIHMKMLHRIRGICNDKGP---EAGNETDNDDS- 1332
Query: 1166 MRGEENDDDGDVSXXXXXXXXXXXA-QKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEK 990
+ G++N DDGD QK+K+Q TDE+DY++ SEDE NE +G E +
Sbjct: 1333 VSGKQNKDDGDDDGEGTEVDDLGSDAQKQKKQVTDEMDYEENSEDETNEPSSISGVEDPE 1392
Query: 989 ENGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQ 810
+ D E+ +D ++A++ + E+ P R+
Sbjct: 1393 MDSENEDAEVSKEDTPEPQEEADVSKE--------ETMEPQKEVKAVKNVKEQSKKKRRK 1444
Query: 809 LSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQK 630
+DR I V +DPHILL Q+A A+KVYI+ +G IE C
Sbjct: 1445 FVGATSDRHIFVRGEGEKFEVHFQFAT--DDPHILLAQIAQKTAQKVYIQDSGKIERCTV 1502
Query: 629 IDCSNGQVLCHSN-------VSAEEKKRNSALLTAGVD--------XXXXXXXXXXXXXX 495
+C + QV+ H + +S +EKK + AL +GVD
Sbjct: 1503 ANCGDPQVIYHGDNPKERREISNDEKKASPALHASGVDFPALWEFQDKLDVRYLYSNSIH 1562
Query: 494 XXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAES 315
ARE+IIRE++HVF SYGI+V IRHL LIAD+MT SGGY PMSR GGIAES
Sbjct: 1563 DMLNVFGVEAARETIIREINHVFKSYGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAES 1622
Query: 314 VSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
SPF ++TFETA+KFIV+AA YG D LE+PSAR+CLGLP GTGCFD+MQ+V++
Sbjct: 1623 TSPFCRMTFETATKFIVQAATYGEKDTLETPSARICLGLPALSGTGCFDLMQRVEL 1678
>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1628
Score = 879 bits (2270), Expect = 0.0
Identities = 505/1010 (50%), Positives = 640/1010 (63%), Gaps = 31/1010 (3%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTGEDD 2904
SE EM PAI KPEPLWTGKQVI+A+L +ITKG PPFTVEK KIP +F + TGE
Sbjct: 665 SESEMFLFPPAIFKPEPLWTGKQVISALLCYITKGRPPFTVEKNAKIPSSFFKTQTGE-- 722
Query: 2903 LSVERKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHTVQELYGPKTAGI 2724
+++ T ++Y +NDLVRGV+DKAQFG YG+VHTVQE YG TAGI
Sbjct: 723 --IKKHTKDTSRKKDELEDKLLIY--RNDLVRGVVDKAQFGDYGMVHTVQEFYGSNTAGI 778
Query: 2723 LLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXXXXXXXXXXXXKR 2544
LLSA SRLFT FLQMHGFTCGVDDLLI +D ER +LE C++ G
Sbjct: 779 LLSALSRLFTNFLQMHGFTCGVDDLLIKVGKDSERLNQLESCEEIG-------------- 824
Query: 2543 KDIRNVYSKFLGIKYDE-IDPKELPNEIEYGICRYGEVGTTSLDNEMRKHL-SNASTEVN 2370
DI V+ +F+G+ E IDP + +E I GE T LD +M +L S S+ V
Sbjct: 825 -DI--VHREFIGVMESENIDPITMQLNVEKKIRSNGEAAITYLDRKMISNLNSRTSSGVL 881
Query: 2369 KDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGKRVPRMVSGKTLPS 2190
K+L KG LKP KN SLMTT+GAKG MVNFQQ+SS LGQQ+LEGKRVPRMVSGKTLP
Sbjct: 882 KELLSKGSLKPSGKNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPC 941
Query: 2189 FLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLE 2010
F WD SPRAGGFI D FLT L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE
Sbjct: 942 FPSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLE 1001
Query: 2009 CLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQILREKFLHHLDKSN 1830
LKVCYDHTVRD+DGSIIQF YGEDGVDVHQTSFI+KF+AL N +++ LD+S+
Sbjct: 1002 SLKVCYDHTVRDSDGSIIQFHYGEDGVDVHQTSFINKFEALSINKELIYSNCCRQLDRSS 1061
Query: 1829 SYIKHLPPKLEKKAREFIKGVPEKKKH---IDDEDFMKLMNHKYFSSLAQPGEPVGVLAA 1659
YI LP L+ KA FI+ K+++ + + DF+++M HKY SSLAQPGEPVGVLA+
Sbjct: 1062 PYINKLPDALKGKAENFIRDFSSKQRNSSSMKEADFLQVMEHKYVSSLAQPGEPVGVLAS 1121
Query: 1658 QSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTCPLLKEKSTDE 1479
QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRL EI++ AS NIKTP MTCPL KS ++
Sbjct: 1122 QSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLHEIVVAASKNIKTPFMTCPLRPNKSMED 1181
Query: 1478 IAKGLAQTLKKVTVGDITEN-----IYVGLRHHLYSRVYTLVMNLYRPA---SNSGISLK 1323
+ LA +KK+TV DI E+ + V ++ +Y L M L++P + ++L+
Sbjct: 1182 AIR-LADKMKKITVADIIESMKVSVVPVAVKEGRICSIYKLTMKLHKPKHYPKYTDVTLE 1240
Query: 1322 DYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETD---EEVSGMRGEE 1152
D++ETL + FVRELEDAI N I+ + R+ GI+ F S S + D E S G+
Sbjct: 1241 DWEETLRVGFVRELEDAIENHISLLARISGIKDFQGKSNSSNGLDNDHSNESASNQNGQT 1300
Query: 1151 NDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQEKENGNCL 972
+DDD +V AQK K+++TDEVDYDD E+E ++G S E ++ +
Sbjct: 1301 DDDD-EVGDTEDAEEDGFDAQKSKQRATDEVDYDDGPEEETHDGEKSEDVEVSEDGKD-- 1357
Query: 971 DTEMDGDDVSRNSQDAEMDGDDDASNLPSESQSPXXXXXXXXXXXXXXXXXXRQLSRKDA 792
D + +G +V+ + D E++ D L S+S + + K
Sbjct: 1358 DEDDNGVEVNGDDSDIEVNDSDKNVTLEETSKSKKRKF---------------EPASKKY 1402
Query: 791 DRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSAGDIEHCQKIDCSNG 612
DR + V +PHILL Q+A A+KV I++ G + C+ I C
Sbjct: 1403 DRRVYVKAGGMRFEIHFKFIG---EPHILLAQIAQRTAEKVCIQNFGKVGQCKAITCKES 1459
Query: 611 QVLCH-------SNVSAEEKKRNSALLTAGV--------DXXXXXXXXXXXXXXXXXXXX 477
V+ + ++ + K++ AL T+G+ +
Sbjct: 1460 GVIYYGEDDSKRDDIPSSVKEKIPALQTSGIHFKTFWEMEDDLKVRYVYSNDVHAILKAY 1519
Query: 476 XXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSGGYNPMSRSGGIAESVSPFSK 297
A+E IIREV +VF SYGI+V+IRHL LIADFMTHSG Y P++RS GIA+S SPF K
Sbjct: 1520 GVEAAKEVIIREVQNVFKSYGISVNIRHLMLIADFMTHSGSYRPLTRS-GIADSTSPFVK 1578
Query: 296 ITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTGCFDVMQKVDI 147
I++ETAS FIVEAA +G D LE+PS+R+CLGLPVK+GTGC D++QK++I
Sbjct: 1579 ISYETASNFIVEAARHGQVDTLETPSSRICLGLPVKMGTGCIDLIQKLEI 1628
>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
vesca subsp. vesca]
Length = 1673
Score = 878 bits (2269), Expect = 0.0
Identities = 519/1030 (50%), Positives = 638/1030 (61%), Gaps = 51/1030 (4%)
Frame = -3
Query: 3083 SEDEMQTLQPAILKPEPLWTGKQVITAVLNHITKGHPPFTVEKEGKIPREYFGSNTG-ED 2907
SED MQ PAI KP W GKQ+IT +LN IT G PP T EKE K+P +F T E+
Sbjct: 682 SEDAMQLPLPAIWKPVRKWPGKQIITTLLNRITSGSPPLTFEKEAKLPSGFFNCKTPVEE 741
Query: 2906 DLSVE-----------RKTSXXXXXXXXXXXXEILYVSKNDLVRGVIDKAQFGSYGLVHT 2760
+ S + ++ L + KN+LVRGVIDK QFG YGLVH
Sbjct: 742 ERSAKGHRAKEKQSRIKEAGKDDSREIEEPDESKLLIYKNNLVRGVIDKNQFGDYGLVHN 801
Query: 2759 VQELYGPKTAGILLSAFSRLFTVFLQMHGFTCGVDDLLILKYRDIERKQELEKCQDFGXX 2580
V ELYG + AG LLSAFSRL+TV+LQMHGFTCGVDDLL+L+ +D + K++LE C++ G
Sbjct: 802 VHELYGSEAAGKLLSAFSRLYTVYLQMHGFTCGVDDLLLLQSKDKKMKEQLESCEELG-- 859
Query: 2579 XXXXXXXXXXKRKDIRNVYSKFLGIKYDEIDPKE-LPNEIEYGICRYGEVGTTSLDNEMR 2403
V +F+G++ +E L ++IE + GE + LD +M
Sbjct: 860 ---------------EKVIREFIGVRQNERKGALILQSDIEEFLRNNGESVSEMLDRKMT 904
Query: 2402 KHLSN--ASTEVNKDLFVKGLLKPFPKNCFSLMTTTGAKGGMVNFQQVSSLLGQQDLEGK 2229
L+ ++++V K LF KGL KP KNC LMT++GAKGG+ N QQ+++ LGQQ+LEGK
Sbjct: 905 SELNKKISNSDVFKQLFQKGLSKPSFKNCMYLMTSSGAKGGVANLQQIAAYLGQQELEGK 964
Query: 2228 RVPRMVSGKTLPSFLPWDWSPRAGGFISDNFLTGLHPQEYYFHCMAGREGLVDTAVKTSR 2049
RVP+MVSGKTLP F PWDWSPRAGGFI D FLTGLHPQEYYFHCMAGREGLVDTAVKTSR
Sbjct: 965 RVPQMVSGKTLPCFPPWDWSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSR 1024
Query: 2048 SGYLQRCLIKNLECLKVCYDHTVRDADGSIIQFSYGEDGVDVHQTSFISKFKALEENHQI 1869
SGYLQRCLIKNLECLKV YD+TVRDADGSIIQF YGEDG+DVH TSFI KF+ L N ++
Sbjct: 1025 SGYLQRCLIKNLECLKVSYDYTVRDADGSIIQFRYGEDGIDVHLTSFIQKFEKLANNKEM 1084
Query: 1868 LREKFLHHLDKSNSYIKHLPPKLEKKAREFIKGVPEKKKHIDDEDFMKLMNHKYFSSLAQ 1689
++F +DK N YI LPP L++KA + K+K+ + +KLM HK+ SSLAQ
Sbjct: 1085 FDKRFGREIDKFNPYIDELPPALKRKAEMSGPDLSLKEKNAN----LKLMEHKFLSSLAQ 1140
Query: 1688 PGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVNIKTPIMTC 1509
PGEPVG+LAAQSVGEPSTQMTLNTFH AGR EMNVTLGIPRLQEILMTAS +IKTP+MTC
Sbjct: 1141 PGEPVGILAAQSVGEPSTQMTLNTFHNAGRSEMNVTLGIPRLQEILMTASNDIKTPVMTC 1200
Query: 1508 PLLKEKSTDEIAKGLAQTLKKVTVGDITENIYVGLR-----HHLYSRVYTLVMNLYRPAS 1344
PL K+ D AK LA LK++TV DI E++ V ++ H RVY L M + P
Sbjct: 1201 PLRMGKAED--AKSLAGRLKRITVADIIESMKVNIKPFTHQDHQTCRVYELEMTFFIPEH 1258
Query: 1343 NSGISLKDYKETLTIQFVRELEDAIHNQINAIKRMHGIQAFDQPSQSKASKETDEE---- 1176
S S +D++E L ++FVR LEDAI N + + ++ GI+ S KAS ETDE+
Sbjct: 1259 LSKFS-EDWEELLKVKFVRALEDAIQNHLVLLSKISGIKDIKADSLPKASNETDEDISFN 1317
Query: 1175 VSGMRGEENDDDGDVSXXXXXXXXXXXAQKRKRQSTDEVDYDDASEDEPNEGVLSTGFEQ 996
+S GE DDD AQK+KRQ TDE++YDD EDE NEG S FE
Sbjct: 1318 ISQHEGEGGDDDNVDDSGEGVEDFGLDAQKQKRQGTDEMEYDDDWEDEFNEGRQSDEFEN 1377
Query: 995 EKENGNCLDTEMDGDDVSRNSQDAEMDGDDDASNLPSESQS------PXXXXXXXXXXXX 834
E +NG LD E+D D V+ G DA++ ES S P
Sbjct: 1378 EIDNGE-LDVEIDKDGVT---------GISDANDKMQESCSTGGISKPHSKGKKTKSRDK 1427
Query: 833 XXXXXXRQLSRKDADRSIEVXXXXXXXXXXXXXXXTDEDPHILLQQVALNVAKKVYIKSA 654
+L RK+ DR+ V +PHILL Q+A A+ VY+KS+
Sbjct: 1428 IKKKTSAKLVRKEYDRATFV---SAKGFHFEIHFKFTNEPHILLDQIAQKTARNVYVKSS 1484
Query: 653 GDIEHCQKIDC--SNGQVLC-----------HSNVSAEEKKRNSALLTAGVD-------- 537
G+I CQ ID + QV C N S EEKK AL TAGVD
Sbjct: 1485 GNILDCQDIDIYGNEDQVFCCWNDPRNKLSGEKNPSEEEKKMR-ALQTAGVDFATLWKLQ 1543
Query: 536 XXXXXXXXXXXXXXXXXXXXXXXXARESIIREVSHVFNSYGITVDIRHLTLIADFMTHSG 357
ARE+II+E+S+VF YGI+V+IRHL LIAD+MT SG
Sbjct: 1544 DDLDVNYIYSNNIHAMLNTYGVEAARETIIKEISNVFKVYGISVNIRHLLLIADYMTRSG 1603
Query: 356 GYNPMSRSGGIAESVSPFSKITFETASKFIVEAALYGLTDDLESPSARVCLGLPVKVGTG 177
Y PM+R GGIAES SP +K++FETASKFI EAA +G DDLE+PSAR+CLGLPVKVGTG
Sbjct: 1604 SYRPMNRFGGIAESTSPMNKMSFETASKFIQEAAYHGEKDDLETPSARICLGLPVKVGTG 1663
Query: 176 CFDVMQKVDI 147
CFD+M K++I
Sbjct: 1664 CFDLMHKMEI 1673