BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00015307
         (844 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53052.1| retrotransposon protein, putative, Ty3-gypsy subc...   318   1e-84
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo...   318   2e-84
gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subc...   317   4e-84
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo...   317   4e-84
emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group] gi...   317   5e-84
gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subc...   316   6e-84
emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group]         315   1e-83
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc...   314   2e-83
gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-c...   314   2e-83
gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subc...   314   2e-83
tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacillifo...   313   5e-83
gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]     310   4e-82
gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]      279   8e-73
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...   259   1e-66
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]         258   3e-66
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               248   2e-63
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                   248   2e-63
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               248   3e-63
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16...   247   3e-63
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...   247   5e-63

>gb|AAP53052.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1183

 Score =  318 bits (816), Expect = 1e-84
 Identities = 152/247 (61%), Positives = 196/247 (79%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H E VRGKSRM+INYKRLNDNT  D
Sbjct: 716  EDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHVEEVRGKSRMIINYKRLNDNTIED 775

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
             Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 776  AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 835

Query: 484  KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
            K+AP+IFQRKM +IF +++ F++ YIDD+L FS++ +EH  HL+I   +   +R+I+ KK
Sbjct: 836  KNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEIFFRKVEQNRLILSKK 895

Query: 304  KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
            KM + K++I FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 896  KMEICKEKINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 955

Query: 124  LGKIAGP 104
            L K+AGP
Sbjct: 956  LAKLAGP 962


>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  318 bits (815), Expect = 2e-84
 Identities = 153/247 (61%), Positives = 196/247 (79%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 1296 KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 1355

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
             Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 1356 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 1415

Query: 484  KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
            K+AP+IFQRKM +IF +++ F++ YIDD+L FS++ +EH  HL+I   +   + +I+ KK
Sbjct: 1416 KNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKK 1475

Query: 304  KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
            KM + K++I FLG  IG+G+I LQ HIA   LEFPD + + K++QQFLGLVNYAR+ I +
Sbjct: 1476 KMEICKEKINFLGHEIGEGKIHLQEHIAKKILEFPDAMNDKKKLQQFLGLVNYARNHINN 1535

Query: 124  LGKIAGP 104
            L K+AGP
Sbjct: 1536 LAKLAGP 1542


>gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 730

 Score =  317 bits (812), Expect = 4e-84
 Identities = 151/247 (61%), Positives = 197/247 (79%)
 Frame = -1

Query: 844 QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
           +D+++F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 129 KDIKEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 188

Query: 664 GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
            Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 189 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 248

Query: 484 KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
           K+AP+IFQRKM +IF +++ F++ YIDD+L FS++ +EH  HL+I   +   + +I+ KK
Sbjct: 249 KNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKK 308

Query: 304 KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
           KM + K++I FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR++I +
Sbjct: 309 KMEICKEKINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNYINN 368

Query: 124 LGKIAGP 104
           L K+AGP
Sbjct: 369 LAKLAGP 375


>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  317 bits (812), Expect = 4e-84
 Identities = 152/247 (61%), Positives = 196/247 (79%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 1296 KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 1355

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
             Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 1356 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 1415

Query: 484  KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
            K+AP+IFQRKM +IF +++ F++ YIDD+L FS++ +EH  HL+I   +   + +I+ KK
Sbjct: 1416 KNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKK 1475

Query: 304  KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
            KM + K++I FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 1476 KMEICKEKINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 1535

Query: 124  LGKIAGP 104
            L K+AGP
Sbjct: 1536 LAKLAGP 1542


>emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group]
           gi|116310779|emb|CAH67571.1| H0315A08.1 [Oryza sativa
           Indica Group]
          Length = 685

 Score =  317 bits (811), Expect = 5e-84
 Identities = 152/247 (61%), Positives = 197/247 (79%)
 Frame = -1

Query: 844 QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
           +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLN+NT  D
Sbjct: 191 KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNNNTIED 250

Query: 664 GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
            Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 251 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 310

Query: 484 KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
           K+AP+IFQRKM +IF +++ F++ YIDD+L FS++ +EH  HL+I I +   + +I+ KK
Sbjct: 311 KNAPAIFQRKMQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEIFIRKVEQNGLILSKK 370

Query: 304 KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
           KM + K++I FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 371 KMEICKEKINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 430

Query: 124 LGKIAGP 104
           L K+AGP
Sbjct: 431 LAKLAGP 437


>gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1098

 Score =  316 bits (810), Expect = 6e-84
 Identities = 150/247 (60%), Positives = 196/247 (79%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 525  KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 584

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
             Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 585  AYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 644

Query: 484  KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
            K+AP++FQRKM +IF  ++ FV+ YIDD+L FSK+ ++H  HL++   +   + +I+ KK
Sbjct: 645  KNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDHIAHLELFFRKVEQNGLILSKK 704

Query: 304  KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
            KM ++K+++ FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 705  KMEIYKEKVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 764

Query: 124  LGKIAGP 104
            L K+AGP
Sbjct: 765  LAKLAGP 771


>emb|CAE03089.2| OSJNBa0017B10.4 [Oryza sativa Japonica Group]
          Length = 429

 Score =  315 bits (808), Expect = 1e-83
 Identities = 151/247 (61%), Positives = 196/247 (79%)
 Frame = -1

Query: 844 QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
           +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 80  KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 139

Query: 664 GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
            Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 140 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 199

Query: 484 KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
           K+AP+IFQRK+ +IF +++ F++ YIDD+L FS++ +EH  HL+I   +   + +I+ KK
Sbjct: 200 KNAPAIFQRKIQNIFNENQEFILVYIDDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKK 259

Query: 304 KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
           KM + K++I FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 260 KMEICKEKINFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 319

Query: 124 LGKIAGP 104
           L K+AGP
Sbjct: 320 LAKLAGP 326


>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 792

 Score =  314 bits (805), Expect = 2e-83
 Identities = 150/247 (60%), Positives = 195/247 (78%)
 Frame = -1

Query: 844 QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
           +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 191 KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 250

Query: 664 GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
            Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 251 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 310

Query: 484 KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
           K+AP++FQRKM +IF  ++ FV+ YIDD+L FSK+ ++H  HL++   +   + +I+ KK
Sbjct: 311 KNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDHIAHLELFFRKVEQNGLILSKK 370

Query: 304 KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
           KM + K+++ FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 371 KMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 430

Query: 124 LGKIAGP 104
           L K+AGP
Sbjct: 431 LAKLAGP 437


>gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 2828

 Score =  314 bits (805), Expect = 2e-83
 Identities = 150/247 (60%), Positives = 195/247 (78%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 2255 KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 2314

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
             Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 2315 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 2374

Query: 484  KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
            K+AP++FQRKM +IF  ++ FV+ YIDD+L FSK+ ++H  HL++   +   + +I+ KK
Sbjct: 2375 KNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDHIAHLELFFRKVEQNGLILSKK 2434

Query: 304  KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
            KM + K+++ FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 2435 KMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 2494

Query: 124  LGKIAGP 104
            L K+AGP
Sbjct: 2495 LAKLAGP 2501


>gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 764

 Score =  314 bits (805), Expect = 2e-83
 Identities = 150/247 (60%), Positives = 195/247 (78%)
 Frame = -1

Query: 844 QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
           +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 191 KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 250

Query: 664 GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
            Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 251 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 310

Query: 484 KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
           K+AP++FQRKM +IF  ++ FV+ YIDD+L FSK+ ++H  HL++   +   + +I+ KK
Sbjct: 311 KNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKDHIAHLELFFRKVEQNGLILSKK 370

Query: 304 KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
           KM + K+++ FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 371 KMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 430

Query: 124 LGKIAGP 104
           L K+AGP
Sbjct: 431 LAKLAGP 437


>tpd|FAA00006.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1711

 Score =  313 bits (802), Expect = 5e-83
 Identities = 150/247 (60%), Positives = 194/247 (78%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            +D+E+F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMVINYKRLNDNT  D
Sbjct: 1289 KDIEEFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVINYKRLNDNTIED 1348

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
             Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 1349 AYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 1408

Query: 484  KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
            K+AP++FQRKM +IF  ++ FV+ YIDD+L FSK+ + H  HL++   +   + +I+ KK
Sbjct: 1409 KNAPALFQRKMQNIFNDNQEFVLVYIDDLLIFSKTYKXHIAHLELFFRKVEQNGLILSKK 1468

Query: 304  KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
            KM + K+++ FLG  IG+G+I LQ HIA   L+FPD + + K++QQFLGLVNYAR+ I +
Sbjct: 1469 KMEICKEKVNFLGHEIGEGKIHLQEHIAKKILQFPDAMNDKKKLQQFLGLVNYARNHINN 1528

Query: 124  LGKIAGP 104
            L K+AGP
Sbjct: 1529 LAKLAGP 1535


>gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1326

 Score =  310 bits (794), Expect = 4e-82
 Identities = 150/247 (60%), Positives = 193/247 (78%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            +D+E F+MHI ELL+LG IR S SPH+S+AFIVR H+E VRGKSRMV NYKRLNDNT  D
Sbjct: 871  KDIEQFKMHIEELLKLGAIRESRSPHRSAAFIVRNHAEEVRGKSRMVKNYKRLNDNTIED 930

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
             Y+IP+  + INRIQ  K FSKFDLK+ FWQVKM  ESIEWTAFTCP+GH+EWLVMP GL
Sbjct: 931  AYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKMAEESIEWTAFTCPQGHYEWLVMPLGL 990

Query: 484  KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
            K+AP+IFQRKM +IF +++ F++ YI+D+L FS++ +EH  HL+I   +   + +I+ KK
Sbjct: 991  KNAPAIFQRKMQNIFNENQEFILVYINDLLVFSRTYKEHIAHLEIFFRKVEQNGLILSKK 1050

Query: 304  KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
            KM + K++I FLG  I +G+I LQ HIA   L+FPD + + KQ+QQFLGLVNYAR+ I +
Sbjct: 1051 KMEICKEKINFLGHEIREGKIHLQEHIAKKILQFPDAINDKKQLQQFLGLVNYARNHINN 1110

Query: 124  LGKIAGP 104
            L K+AGP
Sbjct: 1111 LAKLAGP 1117


>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
          Length = 2027

 Score =  279 bits (714), Expect = 8e-73
 Identities = 141/247 (57%), Positives = 179/247 (72%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            +D+E+F+  I ELL L +IRRS SPH+S+AFIVR H+E  RGK+R+V NYKRLNDNT +D
Sbjct: 929  EDIEEFKKQIKELLDLKLIRRSTSPHRSAAFIVRNHAEQKRGKARIVYNYKRLNDNTHDD 988

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
             Y++P    ++N IQ  KIFSKFDLKS + Q+KM  E   WTAFTCPEG FEW V+ FGL
Sbjct: 989  AYNLPHKDSILNLIQNKKIFSKFDLKSGYNQIKMKEEDRPWTAFTCPEGLFEWNVLSFGL 1048

Query: 484  KDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRKK 305
            K+AP+IFQR MD +F K++ F I YIDDIL  S + QEH  HL++V        I+I KK
Sbjct: 1049 KNAPAIFQRFMDSLFKKYE-FCIVYIDDILVASDTVQEHIKHLELVFKTIKEAGIVISKK 1107

Query: 304  KMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIKD 125
            K  + K  I FLG+ IG G+I+LQPHI   ALE+PDK+EN  ++Q FLGL+NYAR FI +
Sbjct: 1108 KTEIAKTYINFLGLKIGKGQIELQPHIVTKALEYPDKIENKNKLQSFLGLLNYARKFIPN 1167

Query: 124  LGKIAGP 104
            L K+ GP
Sbjct: 1168 LSKLVGP 1174


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
            gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein banding
            virus]
          Length = 708

 Score =  259 bits (661), Expect = 1e-66
 Identities = 125/248 (50%), Positives = 175/248 (70%), Gaps = 1/248 (0%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            QD E+F+  I ELL+LG+IR S SPH S AF+VR H+EI RGK+RMVINYK+LND+T+ D
Sbjct: 289  QDREEFKTQIEELLKLGIIRPSKSPHSSPAFMVRNHAEIKRGKARMVINYKKLNDHTKGD 348

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
            GY +P+  QL+ RI     +S FD KS FWQV++ PE+I+ TAF+CP+GH+EWLVMPFGL
Sbjct: 349  GYLLPNKEQLLQRIGGKTFYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGL 408

Query: 484  KDAPSIFQRKMDD-IFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRK 308
            K AP+IFQR MD+ +   + +F   Y+DDI+ FSK+ +EH GH++IV++      I++ K
Sbjct: 409  KQAPAIFQRHMDESLSNMYPQFCAVYVDDIIVFSKTEEEHLGHVKIVLNRCKALGIVLSK 468

Query: 307  KKMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIK 128
            KK  L K  I FLG++I  G +K+Q HI    + FPD+L +   +Q+FLGL+NY  ++  
Sbjct: 469  KKAQLCKTTINFLGLVIERGNLKVQSHIGLHLVAFPDQLSDRNALQRFLGLLNYISAYFP 528

Query: 127  DLGKIAGP 104
             +  +  P
Sbjct: 529  KIANLRSP 536


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score =  258 bits (658), Expect = 3e-66
 Identities = 126/248 (50%), Positives = 172/248 (69%), Gaps = 1/248 (0%)
 Frame = -1

Query: 844  QDVEDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEIVRGKSRMVINYKRLNDNTRND 665
            QD E+F+  I ELL+LG+IR S SPH S AF+VR H+EI RGK+RMVINYK+LNDNT+ D
Sbjct: 280  QDREEFKTQIEELLKLGIIRPSKSPHSSPAFMVRNHAEIKRGKARMVINYKKLNDNTKGD 339

Query: 664  GYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVMPFGL 485
            GY +P+  QL+ RI     +S FD KS FWQV++ PE+I+ TAF+CP+GH+EWLVMPFGL
Sbjct: 340  GYLLPNKEQLLQRIGGKTYYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFGL 399

Query: 484  KDAPSIFQRKMDD-IFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRIIIRK 308
            K AP+IFQR MD+ +   +  F   Y+DDI+ FSK+  EH GH++IV++      I++ K
Sbjct: 400  KQAPAIFQRHMDESLSNMYPSFCAVYVDDIIVFSKTEDEHLGHVKIVLNRCKALGIVLSK 459

Query: 307  KKMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDKLENLKQIQQFLGLVNYARSFIK 128
            KK  L K  I FLG++I  G +K+Q HI      FPD+L +   +Q+FLGL+NY  ++  
Sbjct: 460  KKAQLCKTTINFLGLVIERGNLKVQSHIGLHLTAFPDQLADRNALQRFLGLLNYISAYFP 519

Query: 127  DLGKIAGP 104
             +  +  P
Sbjct: 520  KIANLRSP 527


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  248 bits (633), Expect = 2e-63
 Identities = 128/252 (50%), Positives = 170/252 (67%), Gaps = 8/252 (3%)
 Frame = -1

Query: 835  EDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEI-------VRGKSRMVINYKRLNDN 677
            E FR H+  LL++G IR S S H+++A IV   + I       V+GK RMV NYKRLND 
Sbjct: 1395 ESFRKHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDL 1454

Query: 676  TRNDGYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVM 497
            T  D Y +P    ++ R++   IFSKFDLKS F QV MHP+S+EWTAF  P G +EWLVM
Sbjct: 1455 TNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSVEWTAFWVPSGLYEWLVM 1514

Query: 496  PFGLKDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRII 317
            PFGLK+AP++FQRKMD  F   + F+  YIDDIL FSK+ +EH  HLQI++S    + +I
Sbjct: 1515 PFGLKNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEKEHEEHLQIMLSICQRNGLI 1574

Query: 316  IRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDK-LENLKQIQQFLGLVNYAR 140
            +   KM + + +IEFLG II +G IKLQPHI    L F +K LE +K ++ +LGL+NYAR
Sbjct: 1575 LSPTKMKIAQAEIEFLGAIIHNGLIKLQPHIVQKLLTFTNKQLEEVKGLRSWLGLLNYAR 1634

Query: 139  SFIKDLGKIAGP 104
            S+I  +G++  P
Sbjct: 1635 SYIPHMGRLLSP 1646


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score =  248 bits (633), Expect = 2e-63
 Identities = 128/252 (50%), Positives = 170/252 (67%), Gaps = 8/252 (3%)
 Frame = -1

Query: 835  EDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEI-------VRGKSRMVINYKRLNDN 677
            E FR H+  LL++G IR S S H+++A IV   + I       V+GK RMV NYKRLND 
Sbjct: 917  ESFRRHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDL 976

Query: 676  TRNDGYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVM 497
            T  D Y +P    ++ R++   IFSKFDLKS F QV MHP+S+EWTAF  P G +EWLVM
Sbjct: 977  TNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFQQVAMHPDSVEWTAFWVPSGLYEWLVM 1036

Query: 496  PFGLKDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRII 317
            PFGLK+AP++FQRKMD  F   + F+  YIDDIL FSK+ +EH  HLQI++S    + +I
Sbjct: 1037 PFGLKNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKTEKEHEEHLQIMLSICQRNGLI 1096

Query: 316  IRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDK-LENLKQIQQFLGLVNYAR 140
            +   KM + + +IEFLG II +G IKLQPHI    L F +K LE +K ++ +LGL+NYAR
Sbjct: 1097 LSPTKMKIAQAEIEFLGAIIHNGLIKLQPHIVQKLLTFTNKQLEEVKGLRSWLGLLNYAR 1156

Query: 139  SFIKDLGKIAGP 104
            S+I  +G++  P
Sbjct: 1157 SYIPHMGRLLSP 1168


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  248 bits (632), Expect = 3e-63
 Identities = 129/252 (51%), Positives = 170/252 (67%), Gaps = 8/252 (3%)
 Frame = -1

Query: 835  EDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEI-------VRGKSRMVINYKRLNDN 677
            E FR H+  LL++G IR S S H+++A IV   + I       V+GK RMV NYKRLND 
Sbjct: 1394 ESFRKHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDL 1453

Query: 676  TRNDGYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVM 497
            T  D Y +P    ++ R++   IFSKFDLKS F QV MHP+SIEWTAF  P G +EWLVM
Sbjct: 1454 TNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVM 1513

Query: 496  PFGLKDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRII 317
            PFGLK+AP++FQRKMD  F   + F+  YIDDIL FSKS +EH  HL+I++S    + +I
Sbjct: 1514 PFGLKNAPAVFQRKMDHCFKGTEAFIAVYIDDILVFSKSEREHEEHLKIMLSICQKNGLI 1573

Query: 316  IRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDK-LENLKQIQQFLGLVNYAR 140
            +   KM + + +IEFLG II +G IKLQPHI    L F +K LE +K ++ +LGL+NYAR
Sbjct: 1574 LSPTKMKIAQVEIEFLGAIIHNGLIKLQPHIVQKLLTFTNKQLEEVKGLRSWLGLLNYAR 1633

Query: 139  SFIKDLGKIAGP 104
            S+I  +G++  P
Sbjct: 1634 SYIPHMGRLLSP 1645


>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
            gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
            yellow mosaic virus]
          Length = 1983

 Score =  247 bits (631), Expect = 3e-63
 Identities = 129/252 (51%), Positives = 169/252 (67%), Gaps = 8/252 (3%)
 Frame = -1

Query: 835  EDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEI-------VRGKSRMVINYKRLNDN 677
            E FR H+  LL++G IR S S H+++A IV   + I       V+GK RMV NYKRLND 
Sbjct: 1410 ESFRKHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDL 1469

Query: 676  TRNDGYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVM 497
            T  D Y +P    ++ R++   IFSKFDLKS F QV MHP+SIEWTAF  P G +EWLVM
Sbjct: 1470 TNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVM 1529

Query: 496  PFGLKDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRII 317
            PFGLK+AP+IFQRKMD  F   + F+  YIDDIL FSK+ Q+H  HLQI+++    + +I
Sbjct: 1530 PFGLKNAPAIFQRKMDHCFKGTEAFIAVYIDDILVFSKTEQDHEKHLQIMLAICQKNGLI 1589

Query: 316  IRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDK-LENLKQIQQFLGLVNYAR 140
            +   KM + + +IEFLG II  G IKLQPHI    L F +K LE +K ++ +LGL+NYAR
Sbjct: 1590 LSPTKMKIAQAEIEFLGAIIHKGLIKLQPHIVQKLLTFTNKQLEEVKGLRSWLGLLNYAR 1649

Query: 139  SFIKDLGKIAGP 104
            S+I  +G++  P
Sbjct: 1650 SYIPHMGRLLSP 1661


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
            gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
            bacilliform virus GD1]
          Length = 1892

 Score =  247 bits (630), Expect = 5e-63
 Identities = 121/252 (48%), Positives = 173/252 (68%), Gaps = 8/252 (3%)
 Frame = -1

Query: 835  EDFRMHISELLQLGVIRRSDSPHKSSAFIVRKHSEI-------VRGKSRMVINYKRLNDN 677
            E FR HI  LL+L VIR S S H+++AFIV   + +        +GK RMV NYKRLND 
Sbjct: 1343 ESFRKHIKGLLELKVIRPSTSKHRTTAFIVNSGTSVDPVTGKETKGKERMVFNYKRLNDL 1402

Query: 676  TRNDGYDIPD*TQLINRIQECKIFSKFDLKSSFWQVKMHPESIEWTAFTCPEGHFEWLVM 497
            T  D Y +P    ++ R+   KI+SKFDLKS F QV MHPESI+WTAF  P+G +EWLVM
Sbjct: 1403 TEKDQYSLPGINTIMKRVGHAKIYSKFDLKSGFHQVAMHPESIKWTAFWVPDGLYEWLVM 1462

Query: 496  PFGLKDAPSIFQRKMDDIFLKHKRFVITYIDDILGFSKSRQEHRGHLQIVISEFINHRII 317
            PFGLK+AP++FQRKMD++F   + F+  YIDDIL FS+S +EH  H+++++ +   + ++
Sbjct: 1463 PFGLKNAPAVFQRKMDNVFKGTEAFIAVYIDDILVFSQSEEEHIKHIRVMLEKCRENGLV 1522

Query: 316  IRKKKMVLFKQQIEFLGVIIGDGRIKLQPHIA*MALEFPDK-LENLKQIQQFLGLVNYAR 140
            +   KM + ++++EFLG I+  GRI+LQPHI    + F D+ L+  K ++ FLGL+NYAR
Sbjct: 1523 LSPTKMKIAQRKVEFLGAILEAGRIQLQPHIIKKVVNFKDEDLQETKGLRSFLGLLNYAR 1582

Query: 139  SFIKDLGKIAGP 104
            ++I  +G++  P
Sbjct: 1583 AYIPQMGRLLSP 1594