BLASTX nr result
ID: Paeonia22_contig00014900
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00014900
(891 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, part... 145 8e-81
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part... 140 3e-80
ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part... 143 4e-80
ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, part... 137 3e-79
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun... 122 1e-74
gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Ja... 95 8e-31
gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 2e-30
ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [S... 93 3e-30
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 89 5e-29
ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, part... 93 7e-29
gb|AAT73648.1| putative polyprotein [Oryza sativa Japonica Group] 90 7e-29
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 106 1e-20
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 103 9e-20
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 103 1e-19
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 92 1e-19
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 85 2e-19
gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida] 100 1e-18
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 86 1e-18
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 87 2e-18
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 86 4e-18
>ref|XP_007219089.1| hypothetical protein PRUPE_ppa015100mg, partial [Prunus persica]
gi|462415551|gb|EMJ20288.1| hypothetical protein
PRUPE_ppa015100mg, partial [Prunus persica]
Length = 641
Score = 145 bits (365), Expect(4) = 8e-81
Identities = 70/112 (62%), Positives = 88/112 (78%)
Frame = +3
Query: 153 FFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVGFGE 332
F IVYL DILI+S T E HL HI +VLE+LR ++L L+ KCEF +++LVYLGFIVG GE
Sbjct: 307 FVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQLNGKKCEFGKQHLVYLGFIVGAGE 366
Query: 333 LKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVR 488
LK+NL K +V++ WPTP V + SF+GACQYLRKFIRHFS I APL++L +
Sbjct: 367 LKMNLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTK 418
Score = 92.0 bits (227), Expect(4) = 8e-81
Identities = 46/75 (61%), Positives = 56/75 (74%)
Frame = +1
Query: 667 HSHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQAR 846
HS FSG V+NY TYDKE+YA+H VK+ RA L KEV+V+SD + Q+LTT KLQ AR
Sbjct: 480 HSEMFSGPVLNYPTYDKELYAMHQAVKHWRAYLLGKEVVVHSDPKPLQFLTTQSKLQHAR 539
Query: 847 HLK*MYYIQQFNIFI 891
H+K M Y+QQFNI I
Sbjct: 540 HMKWMSYLQQFNIVI 554
Score = 72.8 bits (177), Expect(4) = 8e-81
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +2
Query: 485 KGNQKFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPM 664
K NQKFEW H +F LL+ KI++A VL LPN + F VEAD+SN A AVLFQDG+P+
Sbjct: 418 KANQKFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQDGKPV 477
Query: 665 ATH 673
A H
Sbjct: 478 AYH 480
Score = 60.8 bits (146), Expect(4) = 8e-81
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
V I +DTW T K K GLFE LVMPF LCN+ TF++L+NEVL +I+DF
Sbjct: 257 VRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLRPFIDDF 307
>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
gi|462421192|gb|EMJ25455.1| hypothetical protein
PRUPE_ppa018408mg, partial [Prunus persica]
Length = 1440
Score = 140 bits (352), Expect(4) = 3e-80
Identities = 68/112 (60%), Positives = 87/112 (77%)
Frame = +3
Query: 153 FFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVGFGE 332
F IVYL DILI+S T E HL HI +VLE+LR ++L L+ KCEF +++LVYLGFIVG E
Sbjct: 733 FVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQLNGKKCEFGKQHLVYLGFIVGAEE 792
Query: 333 LKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVR 488
LK++L K +V++ WPTP V + SF+GACQYLRKFIRHFS I APL++L +
Sbjct: 793 LKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTK 844
Score = 93.6 bits (231), Expect(4) = 3e-80
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = +1
Query: 667 HSHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQAR 846
HS FSG V+NY TYDKE+YA+H VK+ RA L KEV+V+SD++ Q+LTT KLQ AR
Sbjct: 906 HSEMFSGPVLNYPTYDKELYAMHQVVKHWRAYLLGKEVVVHSDHKPLQFLTTQSKLQHAR 965
Query: 847 HLK*MYYIQQFNIFI 891
H+K M Y+QQFNI I
Sbjct: 966 HMKWMSYLQQFNIVI 980
Score = 72.8 bits (177), Expect(4) = 3e-80
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +2
Query: 485 KGNQKFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPM 664
K NQKFEW H +F LL+ KI++A VL LPN + F VEAD+SN A AVLFQDG+P+
Sbjct: 844 KANQKFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQDGKPV 903
Query: 665 ATH 673
A H
Sbjct: 904 AYH 906
Score = 62.4 bits (150), Expect(4) = 3e-80
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
V I +DTW T K K GLFE LVMPF LCN+ TF+QL+NEVL +I+DF
Sbjct: 683 VRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMQLMNEVLRPFIDDF 733
>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
gi|462398849|gb|EMJ04517.1| hypothetical protein
PRUPE_ppa019964mg, partial [Prunus persica]
Length = 1488
Score = 143 bits (360), Expect(4) = 4e-80
Identities = 69/112 (61%), Positives = 88/112 (78%)
Frame = +3
Query: 153 FFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVGFGE 332
F IVYL DILI+S T E HL HI +VLE+LR ++L L+ KCEF +++LVYLGFIVG GE
Sbjct: 733 FVIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQLNGKKCEFGKQHLVYLGFIVGAGE 792
Query: 333 LKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVR 488
LK++L K +V++ WPTP V + SF+GACQYLRKFIRHFS I APL++L +
Sbjct: 793 LKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTK 844
Score = 94.0 bits (232), Expect(4) = 4e-80
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = +1
Query: 667 HSHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQAR 846
HS FSG V+NY TYDKE+YA+H VK+ RA L KEV+V+SD++ Q+LTT KLQ AR
Sbjct: 906 HSEMFSGPVLNYPTYDKELYAMHQAVKHWRAYLLGKEVVVHSDHKPLQFLTTQSKLQHAR 965
Query: 847 HLK*MYYIQQFNIFI 891
H+K M Y+QQFNI I
Sbjct: 966 HMKWMSYLQQFNIVI 980
Score = 70.9 bits (172), Expect(4) = 4e-80
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = +2
Query: 485 KGNQKFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPM 664
K NQKFEW H +F LL+ KI++A VL LPN + F +EAD+SN A AVLFQ+G+P+
Sbjct: 844 KANQKFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDIEADASNYAMGAVLFQEGKPV 903
Query: 665 ATH 673
A H
Sbjct: 904 AYH 906
Score = 60.5 bits (145), Expect(4) = 4e-80
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
V I +DTW T K K GLFE LVMPF LCN+ TF++L+NEVL +I+DF
Sbjct: 683 VRIHEEDTWKTAFKIKQGLFEWLVMPFGLCNAPATFMRLMNEVLRPFIDDF 733
>ref|XP_007226950.1| hypothetical protein PRUPE_ppa025194mg, partial [Prunus persica]
gi|462423886|gb|EMJ28149.1| hypothetical protein
PRUPE_ppa025194mg, partial [Prunus persica]
Length = 1347
Score = 137 bits (346), Expect(4) = 3e-79
Identities = 67/112 (59%), Positives = 86/112 (76%)
Frame = +3
Query: 153 FFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVGFGE 332
F IVYL DILI+S T E HL HI +VLE+LR ++L L+ KCEF +++LVY GFIVG E
Sbjct: 660 FIIVYLDDILIFSVTWEDHLHHIAQVLEVLRTNQLQLNGKKCEFGKQHLVYPGFIVGARE 719
Query: 333 LKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVR 488
LK++L K +V++ WPTP V + SF+GACQYLRKFIRHFS I APL++L +
Sbjct: 720 LKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTK 771
Score = 94.0 bits (232), Expect(4) = 3e-79
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = +1
Query: 667 HSHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQAR 846
HS FSG V+NY TYDKE+YA+H VK+ RA L KEV+V+SD++ Q+LTT KLQ AR
Sbjct: 833 HSEMFSGPVLNYPTYDKELYAMHQAVKHWRAYLLGKEVVVHSDHKPLQFLTTQSKLQHAR 892
Query: 847 HLK*MYYIQQFNIFI 891
H+K M Y+QQFNI I
Sbjct: 893 HMKWMSYLQQFNIVI 907
Score = 72.8 bits (177), Expect(4) = 3e-79
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +2
Query: 485 KGNQKFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPM 664
K NQKFEW H +F LL+ KI++A VL LPN + F VEAD+SN A AVLFQDG+P+
Sbjct: 771 KANQKFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQDGKPV 830
Query: 665 ATH 673
A H
Sbjct: 831 AYH 833
Score = 60.8 bits (146), Expect(4) = 3e-79
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
V I +DTW T K K GLFE LVMPF LCN+ TF++L+NEVL +I+DF
Sbjct: 610 VRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLRPFIDDF 660
>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
gi|462415599|gb|EMJ20336.1| hypothetical protein
PRUPE_ppa015965mg [Prunus persica]
Length = 1484
Score = 122 bits (307), Expect(4) = 1e-74
Identities = 63/112 (56%), Positives = 77/112 (68%)
Frame = +3
Query: 153 FFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVGFGE 332
F IVYL DILI+S T E HL HI A KCEF +++LVYLGFIVG GE
Sbjct: 746 FVIVYLDDILIFSVTWEDHLHHI---------------AQKCEFGKQHLVYLGFIVGAGE 790
Query: 333 LKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVR 488
LK++L K +V++ WPTP V + SF+GACQYLRKFIRHFS I APL++L +
Sbjct: 791 LKMDLEKVHVISQWPTPRSVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTK 842
Score = 93.6 bits (231), Expect(4) = 1e-74
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = +1
Query: 667 HSHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQAR 846
HS FSG V+NY TYDKE+YA+H VK+ RA L KEV+V+SD++ Q+LTT KLQ AR
Sbjct: 904 HSKMFSGPVLNYPTYDKELYAMHQAVKHWRAYLLGKEVVVHSDHKPLQFLTTQSKLQHAR 963
Query: 847 HLK*MYYIQQFNIFI 891
H+K M Y+QQFNI I
Sbjct: 964 HMKWMSYLQQFNIVI 978
Score = 72.8 bits (177), Expect(4) = 1e-74
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +2
Query: 485 KGNQKFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPM 664
K NQKFEW H +F LL+ KI++A VL LPN + F VEAD+SN A AVLFQDG+P+
Sbjct: 842 KANQKFEWSRNHEESFQLLKRKITEAPVLALPNLQKPFDVEADASNYAMGAVLFQDGKPV 901
Query: 665 ATH 673
A H
Sbjct: 902 AYH 904
Score = 60.8 bits (146), Expect(4) = 1e-74
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
V I +DTW T K K GLFE LVMPF LCN+ TF++L+NEVL +I+DF
Sbjct: 696 VRIHEEDTWKTAFKTKQGLFEWLVMPFGLCNAPATFMRLMNEVLRPFIDDF 746
>gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
gi|108706172|gb|ABF93967.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1461
Score = 94.7 bits (234), Expect(3) = 8e-31
Identities = 43/116 (37%), Positives = 67/116 (57%)
Frame = +3
Query: 144 LRTFFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVG 323
LR F +V+ DILIYS T HL H++ VL +LREHKL + KC F +++ YLG ++
Sbjct: 662 LRRFVLVFFDDILIYSDTWADHLRHLRAVLTVLREHKLFIKRSKCAFGVDSVAYLGHVIS 721
Query: 324 FGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVRE 491
+ ++ K + +WP P + F+G Y RKF+ ++ I APL L+++
Sbjct: 722 AAGVAMDPAKVQAIREWPQPRSARAVRGFLGLAGYYRKFVHNYGTIAAPLTALLKK 777
Score = 45.8 bits (107), Expect(3) = 8e-31
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLF 169
V ++P+D T + GL+E LVMPF LCN+ TF L+N+VL ++ F F
Sbjct: 615 VRMRPEDIHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNDVLRSFLRRFVLVFF 670
Score = 41.2 bits (95), Expect(3) = 8e-31
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 500 FEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
F W T F L+ +S A +L +P+ + F VE D+S+ AVL QDG P+A
Sbjct: 780 FAWTEAATAAFDALKAAVSSAPILAMPDFTKAFTVECDASSHGFGAVLIQDGHPLA 835
>gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1030
Score = 94.0 bits (232), Expect(4) = 2e-30
Identities = 48/116 (41%), Positives = 69/116 (59%)
Frame = +3
Query: 144 LRTFFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVG 323
L F +V++ DILIYSK E+H H++ VLE LR+HKL KCEF + + +LG ++
Sbjct: 383 LEKFVVVFIDDILIYSKDEEEHAEHLRLVLEKLRKHKLYAKFSKCEFWLKEVAFLGHVIS 442
Query: 324 FGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVRE 491
G + V+ K VT+W P V I SF+G Y R+FI FS I P+ L+++
Sbjct: 443 AGGVAVDPTKVEAVTEWKAPKSVTEIQSFLGLAGYYRRFIEGFSKIARPMTQLLKK 498
Score = 40.4 bits (93), Expect(4) = 2e-30
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 485 KGNQKFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPM 664
K +KF W + +F L+ K++ A +LVLPN ++F + D+S VL QDG+ +
Sbjct: 497 KKEKKFVWSEQCQESFEQLKEKLTSAPILVLPNIRKDFVIYCDASRQGLGGVLMQDGKVV 556
Query: 665 A 667
A
Sbjct: 557 A 557
Score = 33.5 bits (75), Expect(4) = 2e-30
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 697 NYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTH--MKLQQARHLK 855
NY TYD E+ A+ H +K R L +Y+D++ +Y+ T + L+Q R L+
Sbjct: 569 NYPTYDLELAAVVHALKIWRHYLIGNHCDIYTDHKSLKYIFTQSDLNLRQKRWLE 623
Score = 32.0 bits (71), Expect(4) = 2e-30
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 8 IKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
I+ D T + GL+E VM F L N+ F+ L+N+V Y+E F
Sbjct: 338 IRTGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLEKF 386
>ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
gi|241933637|gb|EES06782.1| hypothetical protein
SORBIDRAFT_04g018075 [Sorghum bicolor]
Length = 1414
Score = 93.2 bits (230), Expect(3) = 3e-30
Identities = 43/116 (37%), Positives = 66/116 (56%)
Frame = +3
Query: 144 LRTFFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVG 323
LR F +V+ DILIYS T HL H++ VL+ILR H+L + KC F ++ YLG ++
Sbjct: 615 LRRFVLVFFDDILIYSTTWADHLRHLRVVLDILRRHRLFVKRSKCSFGVSSVAYLGHVIS 674
Query: 324 FGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVRE 491
+ ++ K + DWP P + F+G Y RKF+ ++ I APL L+++
Sbjct: 675 AAGVAMDPAKVQAIHDWPQPRSARAVRGFLGLAGYYRKFVHNYGAIAAPLTALLKK 730
Score = 48.1 bits (113), Expect(3) = 3e-30
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLF 169
V ++P+D T + GL+E LVMPF LCN+ TF L+N+VL Y+ F F
Sbjct: 568 VRMRPEDVHKTAFRTHDGLYEFLVMPFGLCNAPATFQALMNDVLRAYLRRFVLVFF 623
Score = 38.5 bits (88), Expect(3) = 3e-30
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 500 FEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
F W A+ F L+ ++ A VL LP+ + F VE D+S AVL Q+G P+A
Sbjct: 733 FTWGAEAEAAFSALKGAVTSAPVLTLPDFSKPFIVECDASTYGFGAVLIQEGHPIA 788
>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 88.6 bits (218), Expect(4) = 5e-29
Identities = 40/110 (36%), Positives = 68/110 (61%)
Frame = +3
Query: 144 LRTFFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVG 323
LR F +V+L DILIYS++ E+H+ H++ VL +L +H L ++ KCEF + + YLG ++
Sbjct: 836 LRRFVLVFLDDILIYSRSDEEHVGHLEMVLGMLAQHALFVNKKKCEFGKREVAYLGHVIS 895
Query: 324 FGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPL 473
G + ++ K V +W P + + F+G Y RKF+ ++++I PL
Sbjct: 896 EGGVAMDTEKVKAVLEWEVPKNLRELRGFLGLTGYYRKFVANYAHIARPL 945
Score = 42.7 bits (99), Expect(4) = 5e-29
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +2
Query: 500 FEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMATHIS 679
F+W A T F L+ + A VL +PN F VE D+S AVL QD RP+A +
Sbjct: 954 FKWSATATEAFKQLKSAMVSAPVLAMPNFQLTFVVETDASGYGMGAVLMQDNRPIAYYSK 1013
Query: 680 LV 685
L+
Sbjct: 1014 LL 1015
Score = 40.4 bits (93), Expect(4) = 5e-29
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
+ ++P+DT T + G +E LVMPF L N+ TF L+NEV ++ F
Sbjct: 789 ILVRPEDTHKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNEVFRPFLRRF 839
Score = 23.5 bits (49), Expect(4) = 5e-29
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 709 YDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKL 834
Y+KE+ A+ V+ + L + +V +D Q +Y+T ++
Sbjct: 1025 YEKELMAICFAVQKWKYYLLGRHFVVRTDQQSLRYITQQREI 1066
>ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, partial [Prunus persica]
gi|462422461|gb|EMJ26724.1| hypothetical protein
PRUPE_ppa026504mg, partial [Prunus persica]
Length = 750
Score = 93.2 bits (230), Expect(3) = 7e-29
Identities = 54/112 (48%), Positives = 66/112 (58%)
Frame = +3
Query: 153 FFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVGFGE 332
F IVYL DILI H + + IL L +YLGFIVG GE
Sbjct: 259 FVIVYLDDILIS---------HGKTIFIILLNVNL-------------EIYLGFIVGAGE 296
Query: 333 LKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVR 488
LKV+L K V++ WPTP+ V + SF+GACQYLRKFIRHFS I APL++L +
Sbjct: 297 LKVDLEKVQVISQWPTPNTVTEVRSFIGACQYLRKFIRHFSQIAAPLHSLTK 348
Score = 55.1 bits (131), Expect(3) = 7e-29
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +2
Query: 32 TVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
T K K GLFE LVMPF LCN+ TF++L+NEVLC +I+DF
Sbjct: 219 TTFKTKQGLFEWLVMPFGLCNARATFMRLMNEVLCPFIDDF 259
Score = 26.9 bits (58), Expect(3) = 7e-29
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 485 KGNQKFEWIAKHTYTFMLLE 544
K NQKFEW H +F L E
Sbjct: 348 KANQKFEWSRNHQESFQLNE 367
>gb|AAT73648.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 997
Score = 90.1 bits (222), Expect(4) = 7e-29
Identities = 46/116 (39%), Positives = 69/116 (59%)
Frame = +3
Query: 144 LRTFFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVG 323
L F +V++ DILIYS+T E+H H++ LE LREH+L KCEF + +LG ++
Sbjct: 415 LDKFVVVFIDDILIYSQTKEEHEKHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVIS 474
Query: 324 FGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVRE 491
G + ++ VT+W P IV I SF+G Y R+FI +FS I P+ L+++
Sbjct: 475 AGGVAIDPSNVESVTNWKQPKIVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQK 530
Score = 37.0 bits (84), Expect(4) = 7e-29
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +2
Query: 8 IKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDF 154
IK +D T + GLFE VM FRL N+ F+ L+N+V Y++ F
Sbjct: 370 IKEEDIPKTAFTTRYGLFECTVMSFRLTNAPAFFMNLMNKVFMEYLDKF 418
Score = 37.0 bits (84), Expect(4) = 7e-29
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 497 KFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
K++W + +F L+ ++ A +L+LP+ + F+V D+S VL QDG+ +A
Sbjct: 533 KYKWSEECEQSFQELKNRLISALILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVA 589
Score = 30.8 bits (68), Expect(4) = 7e-29
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 697 NYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTH--MKLQQARHLK 855
NY T+D E+ A+ H +K R L VY+D++ +Y+ T + ++Q R L+
Sbjct: 601 NYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLE 655
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 106 bits (265), Expect = 1e-20
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Frame = +3
Query: 123 MRYSVYILRTFF----IVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQ 290
MR ++LR F +VY DILIYSKT E+H+ HIQ+VL++LR+ +L + KC F
Sbjct: 855 MRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCT 914
Query: 291 ENLVYLGFIVGFGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAP 470
+ +V+LGF+V ++V+ K + DWPTP V + SF G + R+F+R FS I AP
Sbjct: 915 DQVVFLGFVVSGLGIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAP 974
Query: 471 LYTLVRE 491
L L ++
Sbjct: 975 LNELTKK 981
Score = 65.1 bits (157), Expect(2) = 2e-16
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 1/223 (0%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRRYS 181
+ +K D W T K K GL+E LVMPF L N+ +TF++L+N VL +I F F
Sbjct: 819 IRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDIL 878
Query: 182 NL*QNMRETPSSHPGGVGDITGAQIIIACDEM*ICSGEFSLLGFH-SGIRGAEGEFRKSQ 358
+ + E + + + Q+ ++ C+ + LGF SG+ E +
Sbjct: 879 IYSKTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKA 938
Query: 359 CRNGLAYTSYSNWDS*LHGSMSVFEEVH*TLFIY*STVVYSCKGNQKFEWIAKHTYTFML 538
++ + S S G + + + K F+W F
Sbjct: 939 IKDWPTPENVSQVKS-FRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQE 997
Query: 539 LE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
L+ ++S+ +LVLP+ + F+VE D+S VL Q+G+P+A
Sbjct: 998 LKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVA 1040
Score = 48.1 bits (113), Expect(2) = 2e-16
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQARH 849
S K G +NY YDKE+YAL ++ + L KE +++SD++ +YL KL + RH
Sbjct: 1043 SEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNR-RH 1101
Query: 850 LK*MYYIQQF 879
K + +I+ F
Sbjct: 1102 AKWVEFIETF 1111
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 103 bits (257), Expect = 9e-20
Identities = 51/127 (40%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
Frame = +3
Query: 123 MRYSVYILRTFF----IVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQ 290
MR ++LR F IVY DIL+YSK+ E+H+ H++ VLE+LR+ KL + KC F
Sbjct: 1044 MRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGT 1103
Query: 291 ENLVYLGFIVGFGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAP 470
+NLV+LGF+V +KV+ K + +WP+P V + SF G + R+F++ FS + AP
Sbjct: 1104 DNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAP 1163
Query: 471 LYTLVRE 491
L ++++
Sbjct: 1164 LTEVIKK 1170
Score = 59.3 bits (142), Expect(2) = 3e-14
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 1/223 (0%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRRYS 181
+ +K D W T K GL+E LVMPF L N+ +TF++L+N VL +I F F
Sbjct: 1008 IRMKEGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDIL 1067
Query: 182 NL*QNMRETPSSHPGGVGDITGAQIIIACDEM*ICSGEFSLLGFHSGIRGAEGEFRKSQC 361
+++ E + + ++ + + LGF G + + K +
Sbjct: 1068 VYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKA 1127
Query: 362 -RNGLAYTSYSNWDS*LHGSMSVFEEVH*TLFIY*STVVYSCKGNQKFEWIAKHTYTFML 538
R + S S HG + + + K N F+W F
Sbjct: 1128 IREWPSPKSVGEVRS-FHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQA 1186
Query: 539 LE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
L+ K++ A VL LP+ + F++E D+S VL QD +P+A
Sbjct: 1187 LKEKLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIA 1229
Score = 46.2 bits (108), Expect(2) = 3e-14
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQARH 849
S K G +NY TYDKE+YAL ++ + L KE ++++D++ ++L KL + RH
Sbjct: 1232 SEKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNK-RH 1290
Query: 850 LK*MYYIQQF 879
+ + +I+ F
Sbjct: 1291 ARWVEFIETF 1300
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 103 bits (256), Expect = 1e-19
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Frame = +3
Query: 123 MRYSVYILRTFF----IVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQ 290
MR ++LR F +VY DILIYSK +KH++H++EV +LR +L + KC F
Sbjct: 795 MRLMNHVLRNFIGKFVVVYFDDILIYSKDPQKHIIHLKEVFLVLRREQLYANLEKCYFGV 854
Query: 291 ENLVYLGFIVGFGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAP 470
E++V+LGFIV ++V+ K + DWPTP + SF G + R+F++ FS I AP
Sbjct: 855 ESVVFLGFIVSSKGIEVDETKIQAIRDWPTPKTATKVRSFHGLASFYRRFVKDFSTIAAP 914
Query: 471 LYTLVRE 491
L LV++
Sbjct: 915 LNELVKK 921
Score = 73.6 bits (179), Expect(2) = 4e-17
Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 7/229 (3%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRR-- 175
+ ++ D W T K K GL+E LVMPF L N+ +TF++L+N VL +I F F
Sbjct: 759 IRMQKGDEWKTAFKTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFIGKFVVVYFDDIL 818
Query: 176 -YSNL*QNMRETPSSHPGGVGDI----TGAQIIIACDEM*ICSGEFSLLGFHSGIRGAEG 340
YS + P H + ++ Q+ ++ LGF +G E
Sbjct: 819 IYS-------KDPQKHIIHLKEVFLVLRREQLYANLEKCYFGVESVVFLGFIVSSKGIEV 871
Query: 341 EFRKSQCRNGLAYTSYSNWDS*LHGSMSVFEEVH*TLFIY*STVVYSCKGNQKFEWIAKH 520
+ K Q + HG S + + + K + KFEW K
Sbjct: 872 DETKIQAIRDWPTPKTATKVRSFHGLASFYRRFVKDFSTIAAPLNELVKKDVKFEWGPKQ 931
Query: 521 TYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
F L+ K+ A+VL LPN + F++E D+S AVL Q+G P+A
Sbjct: 932 EQAFQTLKEKLCSAQVLSLPNFDKTFEIECDASGIGIGAVLMQEGHPIA 980
Score = 41.6 bits (96), Expect(2) = 4e-17
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYL 816
S K SG +NY TYDKE+YAL ++ L KE +++SD++ ++L
Sbjct: 983 SEKLSGPALNYSTYDKELYALVRTLETWEHYLWFKEFVIHSDHEALKHL 1031
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 73.9 bits (180), Expect(2) = 1e-19
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 1/223 (0%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRRYS 181
+ I+ D W T K K GL+E +VMPF L N+ +TF++L+N VL ++ F F
Sbjct: 706 IRIREGDEWKTAFKTKFGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDIL 765
Query: 182 NL*QNMRETPSSHPGGVGDITGAQIIIA-CDEM*ICSGEFSLLGFHSGIRGAEGEFRKSQ 358
+N+ + H V + + + A ++ C+ LGF +G + K +
Sbjct: 766 IYSKNL-DDHCIHLKAVLQVLRYENLYANLEKCVFCTDHVIFLGFIVSSKGVHVDEEKVK 824
Query: 359 CRNGLAYTSYSNWDS*LHGSMSVFEEVH*TLFIY*STVVYSCKGNQKFEWIAKHTYTFML 538
+ HG S + + + + + F+W K F
Sbjct: 825 AIREWPPPKNVSEVRSFHGLASFYRRFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFAA 884
Query: 539 LE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
L+ K+++A VL LPN ++F++E D+SN AVL Q+G P+A
Sbjct: 885 LKEKLTQAPVLALPNFSKSFEIECDASNVGIGAVLLQEGHPLA 927
Score = 49.7 bits (117), Expect(2) = 1e-19
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQARH 849
S K G +NY TYDKE+Y+L ++ + L KE +++SD++ ++L KL + RH
Sbjct: 930 SEKLKGAALNYSTYDKELYSLVRALQTWQHYLLPKEFVIHSDHESLKHLKGQGKLNK-RH 988
Query: 850 LK*MYYIQQF 879
+K + +++QF
Sbjct: 989 VKWVEFLEQF 998
Score = 92.0 bits (227), Expect = 3e-16
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Frame = +3
Query: 123 MRYSVYILRTFF----IVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQ 290
MR ++LR F +VY DILIYSK + H +H++ VL++LR L + KC F
Sbjct: 742 MRLMNHVLREFLGKFVVVYFDDILIYSKNLDDHCIHLKAVLQVLRYENLYANLEKCVFCT 801
Query: 291 ENLVYLGFIVGFGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAP 470
+++++LGFIV + V+ K + +WP P V + SF G + R+F++ FS + AP
Sbjct: 802 DHVIFLGFIVSSKGVHVDEEKVKAIREWPPPKNVSEVRSFHGLASFYRRFVKDFSTLAAP 861
Query: 471 LYTLVRE 491
L +V +
Sbjct: 862 LNEIVEK 868
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 71.6 bits (174), Expect(2) = 2e-19
Identities = 58/222 (26%), Positives = 97/222 (43%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRRYS 181
+ +K D W T K K GL+E LVMPF L N+ +TF++L+NEVL +I F F
Sbjct: 819 IRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDIL 878
Query: 182 NL*QNMRETPSSHPGGVGDITGAQIIIACDEM*ICSGEFSLLGFHSGIRGAEGEFRKSQC 361
++M E + A++ ++ C+ S LG+ +G E + K +
Sbjct: 879 IYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEA 938
Query: 362 RNGLAYTSYSNWDS*LHGSMSVFEEVH*TLFIY*STVVYSCKGNQKFEWIAKHTYTFMLL 541
+G G + + + K F W + F +L
Sbjct: 939 IHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVL 998
Query: 542 E*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
+ K++ A +L LP+ + F++E D+S VL Q+G+P+A
Sbjct: 999 KDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVA 1040
Score = 51.6 bits (122), Expect(2) = 2e-19
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQARH 849
S K SG V+NY TYDKE+YAL ++ + L KE +++SD++ +++ + KL + RH
Sbjct: 1043 SEKLSGSVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNR-RH 1101
Query: 850 LK*MYYIQQF 879
K + +I+ F
Sbjct: 1102 AKWVEFIESF 1111
Score = 84.7 bits (208), Expect = 4e-14
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Frame = +3
Query: 123 MRYSVYILRTFF----IVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQ 290
MR +LR F +VY DILIYSK+ ++H+ H++ V LR+ +L + KC F
Sbjct: 855 MRLMNEVLRAFIGKFVVVYFDDILIYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCT 914
Query: 291 ENLVYLGFIVGFGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAP 470
+ + +LG++V ++V+ K + WP P + + SF+G + R+F++ FS I AP
Sbjct: 915 DRVSFLGYVVTPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAP 974
Query: 471 LYTLVRE 491
L L ++
Sbjct: 975 LNELTKK 981
>gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]
Length = 435
Score = 100 bits (248), Expect = 1e-18
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Frame = +3
Query: 123 MRYSVYILRTFF----IVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQ 290
MR ++L++F +VY DILIYS+T ++H+ H+++VLE LR KL + KC F
Sbjct: 13 MRLMNHVLKSFINKFVVVYFDDILIYSRTIDEHVDHLRQVLEALRAEKLYANFKKCAFGV 72
Query: 291 ENLVYLGFIVGFGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAP 470
+ +V+LGF+V ++V+ K + DWPTP V + SF G + R+F++ FS AP
Sbjct: 73 DKVVFLGFVVSAQGVEVDESKVEAIRDWPTPTTVTQVRSFHGLASFYRRFVKDFSSKAAP 132
Query: 471 LYTLVRE 491
L LV++
Sbjct: 133 LTELVKK 139
Score = 45.1 bits (105), Expect(2) = 2e-09
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 1/199 (0%)
Frame = +2
Query: 74 MPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRRYSNL*QNMRETPSSHPGGVGDITGAQ 253
MPF L N+ +TF++L+N VL +I F F + + E + + +
Sbjct: 1 MPFGLSNAPSTFMRLMNHVLKSFINKFVVVYFDDILIYSRTIDEHVDHLRQVLEALRAEK 60
Query: 254 IIIACDEM*ICSGEFSLLGFHSGIRGAEGEFRKSQC-RNGLAYTSYSNWDS*LHGSMSVF 430
+ + + LGF +G E + K + R+ T+ + S HG S +
Sbjct: 61 LYANFKKCAFGVDKVVFLGFVVSAQGVEVDESKVEAIRDWPTPTTVTQVRS-FHGLASFY 119
Query: 431 EEVH*TLFIY*STVVYSCKGNQKFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEA 610
+ + K +Q F W F L+ ++S A +L LP+ + F+VE
Sbjct: 120 RRFVKDFSSKAAPLTELVKKDQPFVWGEPQEKAFQELKGRLSTAPLLQLPDFGKAFEVEC 179
Query: 611 DSSNCAS*AVLFQDGRPMA 667
D+S VL QD +P+A
Sbjct: 180 DASGVGIGGVLMQDSKPIA 198
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQARH 849
S K G +NY TYDKE+YAL + + + L +E + SD++ ++L KL + RH
Sbjct: 201 SEKLKGASLNYSTYDKEVYALVRALAHWQHYLWPREFEIKSDHESLKHLRGQEKLNK-RH 259
Query: 850 LK*MYYIQQF 879
K + +I+ F
Sbjct: 260 AKWVEFIESF 269
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 67.0 bits (162), Expect(2) = 1e-18
Identities = 57/222 (25%), Positives = 96/222 (43%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRRYS 181
+ +K D W T K K GL+E LVMPF L N+ +TF++L+NEVL +I F F
Sbjct: 652 IRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDIL 711
Query: 182 NL*QNMRETPSSHPGGVGDITGAQIIIACDEM*ICSGEFSLLGFHSGIRGAEGEFRKSQC 361
++M E + + A++ ++ C+ S LG+ +G E + K +
Sbjct: 712 IYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEA 771
Query: 362 RNGLAYTSYSNWDS*LHGSMSVFEEVH*TLFIY*STVVYSCKGNQKFEWIAKHTYTFMLL 541
+ G + + + K F W F +L
Sbjct: 772 IQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHML 831
Query: 542 E*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
+ K++ A +L LP+ + F++E D+S VL Q+G+P+A
Sbjct: 832 KDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVA 873
Score = 53.1 bits (126), Expect(2) = 1e-18
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQARH 849
S K SG+V+NY TYDKE+YAL ++ + L KE +++SD++ +++ + KL + RH
Sbjct: 876 SEKLSGLVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNR-RH 934
Query: 850 LK*MYYIQQF 879
K + +I+ F
Sbjct: 935 AKWVEFIESF 944
Score = 55.1 bits (131), Expect(3) = 1e-14
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +3
Query: 264 HAMKCEFAQENLVYLGFIVGFGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFI 443
+ +KCEF + +LG ++ + V+ VTDW P V I SF+G Y R+FI
Sbjct: 1670 YGLKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFI 1729
Query: 444 RHFSYIEAPLYTLVRE 491
+FS I P+ L+++
Sbjct: 1730 ENFSKIARPMTQLLKK 1745
Score = 39.7 bits (91), Expect(3) = 1e-14
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 485 KGNQKFEWIAKHTYTFMLLE*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPM 664
K +KF W + F L+ K+ + VL+LP+T ++F V D+S VL QDG +
Sbjct: 1744 KKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMVYCDASRQGLGCVLMQDGHVV 1803
Query: 665 A 667
A
Sbjct: 1804 A 1804
Score = 31.6 bits (70), Expect(3) = 1e-14
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 697 NYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTH--MKLQQARHLK 855
NY T+D E+ A+ H +K R L +Y+D++ +Y+ T + L+Q R L+
Sbjct: 1816 NYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLE 1870
Score = 85.9 bits (211), Expect = 2e-14
Identities = 41/113 (36%), Positives = 66/113 (58%)
Frame = +3
Query: 153 FFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVGFGE 332
F +VY DILIYSK+ +H H++ V LR+ +L + KC F + + +LG++V
Sbjct: 702 FVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQG 761
Query: 333 LKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVRE 491
++V+ K + WPTP V + SF+G + R+F++ FS I APL L ++
Sbjct: 762 IEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKK 814
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 68.2 bits (165), Expect(2) = 2e-18
Identities = 58/222 (26%), Positives = 95/222 (42%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRRYS 181
+ +K D W T K K GL+E LVMPF L N+ +TF++L+NEVL +I F F
Sbjct: 860 IRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDIL 919
Query: 182 NL*QNMRETPSSHPGGVGDITGAQIIIACDEM*ICSGEFSLLGFHSGIRGAEGEFRKSQC 361
+++ E + A++ + C+ S LG+ +G E + K +
Sbjct: 920 IYSKSLEEHLEHLRAVFIALRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEA 979
Query: 362 RNGLAYTSYSNWDS*LHGSMSVFEEVH*TLFIY*STVVYSCKGNQKFEWIAKHTYTFMLL 541
+ G + + + K + F W F +L
Sbjct: 980 IESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEEAFTVL 1039
Query: 542 E*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
+ K++ A +L LPN + F++E D+S VL QDG+P+A
Sbjct: 1040 KDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVA 1081
Score = 51.6 bits (122), Expect(2) = 2e-18
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQARH 849
S KFSG +NY TYDKE+YAL ++ + L KE +++SD++ +++ + KL + RH
Sbjct: 1084 SEKFSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNR-RH 1142
Query: 850 LK*MYYIQQF 879
K + +I+ F
Sbjct: 1143 AKWVEFIETF 1152
Score = 86.7 bits (213), Expect = 1e-14
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Frame = +3
Query: 123 MRYSVYILRTFF----IVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQ 290
MR +LR F +VY DILIYSK+ E+HL H++ V LR+ +L + KC F
Sbjct: 896 MRLMNEVLRAFIGRFVVVYFDDILIYSKSLEEHLEHLRAVFIALRDARLFGNLGKCTFCT 955
Query: 291 ENLVYLGFIVGFGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAP 470
+ + +LG++V ++V+ K + WP P V + SF+G + R+F+R FS I AP
Sbjct: 956 DRVSFLGYVVTPQGIEVDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAP 1015
Query: 471 LYTLVRE 491
L + ++
Sbjct: 1016 LNEVTKK 1022
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 67.4 bits (163), Expect(2) = 4e-18
Identities = 57/222 (25%), Positives = 96/222 (43%)
Frame = +2
Query: 2 VTIKPKDTWNTVGKAK*GLFE*LVMPFRLCNSLTTFVQLINEVLCLYIEDFFYCLFRRYS 181
+ +K D W T K K GL+E LVMPF L N+ +TF++L+NEVL +I F F
Sbjct: 816 IRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDIL 875
Query: 182 NL*QNMRETPSSHPGGVGDITGAQIIIACDEM*ICSGEFSLLGFHSGIRGAEGEFRKSQC 361
++M E + + A++ ++ C+ S LG+ +G E + K +
Sbjct: 876 IYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEA 935
Query: 362 RNGLAYTSYSNWDS*LHGSMSVFEEVH*TLFIY*STVVYSCKGNQKFEWIAKHTYTFMLL 541
+ G + + + K F W F +L
Sbjct: 936 IQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHML 995
Query: 542 E*KISKARVLVLPNT*RNFKVEADSSNCAS*AVLFQDGRPMA 667
+ K++ A +L LP+ + F++E D+S VL Q+G+P+A
Sbjct: 996 KDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVA 1037
Score = 51.2 bits (121), Expect(2) = 4e-18
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = +1
Query: 670 SHKFSGIVVNYLTYDKEIYALHHDVKY*RACLARKEVIVYSDYQLFQYLTTHMKLQQARH 849
S K SG V+NY TYDKE+YAL ++ + L KE +++SD++ +++ + KL + RH
Sbjct: 1040 SEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNR-RH 1098
Query: 850 LK*MYYIQQF 879
K + +I+ F
Sbjct: 1099 AKWVEFIESF 1108
Score = 85.9 bits (211), Expect = 2e-14
Identities = 41/113 (36%), Positives = 66/113 (58%)
Frame = +3
Query: 153 FFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVGFGE 332
F +VY DILIYSK+ +H H++ V LR+ +L + KC F + + +LG++V
Sbjct: 866 FVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQG 925
Query: 333 LKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVRE 491
++V+ K + WPTP V + SF+G + R+F++ FS I APL L ++
Sbjct: 926 IEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKK 978
Score = 84.3 bits (207), Expect = 6e-14
Identities = 44/116 (37%), Positives = 66/116 (56%)
Frame = +3
Query: 144 LRTFFIVYLGDILIYSKT*EKHLVHIQEVLEILREHKL*LHAMKCEFAQENLVYLGFIVG 323
L F +V++ DIL+YS++ E H H++ VL LREH+L KCEF + +LG ++
Sbjct: 1655 LDKFVVVFIDDILVYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVIS 1714
Query: 324 FGELKVNLGKANVVTDWPTPHIVIGIHSFMGACQYLRKFIRHFSYIEAPLYTLVRE 491
+ V+ VTDW P V I SF+G Y R+FI +FS I P+ L+++
Sbjct: 1715 AKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKK 1770