BLASTX nr result

ID: Paeonia22_contig00014760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00014760
         (888 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005650078.1| splicing factor, component of the U5 snRNP a...    47   3e-06
ref|XP_007003317.1| hypothetical protein TREMEDRAFT_38390 [Treme...    46   7e-06

>ref|XP_005650078.1| splicing factor, component of the U5 snRNP and of the spliceosome
           [Coccomyxa subellipsoidea C-169]
           gi|384252057|gb|EIE25534.1| splicing factor, component
           of the U5 snRNP and of the spliceosome [Coccomyxa
           subellipsoidea C-169]
          Length = 2308

 Score = 46.6 bits (109), Expect(2) = 3e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
 Frame = -3

Query: 715 EST*LDWAEAVLQVCKKG*NMLNLLIHNRD-SKLHTP--CNLKP 593
           +ST LDW EA LQVC++G NMLNLLIH ++ + LH     NLKP
Sbjct: 457 QSTELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKP 500



 Score = 31.6 bits (70), Expect(2) = 3e-06
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 791 HHILPKAQK*KHLFSSIQTTKFFQS 717
           HH  PK  K K LF +++ TKFFQS
Sbjct: 434 HHRPPKNMKKKSLFKALRATKFFQS 458


>ref|XP_007003317.1| hypothetical protein TREMEDRAFT_38390 [Tremella mesenterica DSM
           1558] gi|392577643|gb|EIW70772.1| hypothetical protein
           TREMEDRAFT_38390 [Tremella mesenterica DSM 1558]
          Length = 2335

 Score = 45.8 bits (107), Expect(2) = 7e-06
 Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
 Frame = -3

Query: 715 EST*LDWAEAVLQVCKKG*NMLNLLIHNRD-SKLHTP--CNLKP 593
           ++T LDW EA LQVC++G NMLNLLIH ++ + LH     NLKP
Sbjct: 480 QTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNMNLKP 523



 Score = 31.2 bits (69), Expect(2) = 7e-06
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = -2

Query: 791 HHILPKAQK*KHLFSSIQTTKFFQS 717
           HH  PKA   ++LF S+++TKFFQ+
Sbjct: 457 HHKRPKAMVKRNLFRSLKSTKFFQT 481


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