BLASTX nr result
ID: Paeonia22_contig00014486
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00014486
(2010 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera] 635 e-179
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis] 601 e-169
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 599 e-168
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ... 591 e-166
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas... 589 e-165
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas... 589 e-165
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 588 e-165
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 588 e-165
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu... 562 e-157
ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group] g... 531 e-148
gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indi... 530 e-147
ref|XP_002889060.1| tRNA pseudouridine synthase family protein [... 526 e-146
ref|XP_006307113.1| hypothetical protein CARUB_v10008701mg [Caps... 519 e-144
gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Mimulus... 518 e-144
ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mi... 513 e-142
gb|EAZ24127.1| hypothetical protein OsJ_07867 [Oryza sativa Japo... 471 e-130
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 362 4e-97
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi... 362 5e-97
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 362 5e-97
ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago trunca... 361 8e-97
>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
Length = 559
Score = 635 bits (1637), Expect = e-179
Identities = 335/536 (62%), Positives = 393/536 (73%), Gaps = 3/536 (0%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAVPEQ+RG+ KR+DWARSARTDKGVSA
Sbjct: 32 FFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSA 91
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPGLV+RLNSNL QIRIFGFKRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 92 VGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFAL 151
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1234
DP SHPDRE+VLASVGSENELVKCLECS+RGRKVVG+MGKRSFE + +V D
Sbjct: 152 DPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKV----SVDDREDVE 207
Query: 1233 XXXXXXXXXXXXXXXXXSLDNDH-DDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEK 1057
++ N + K+ N + I +++ + S TI++E A +
Sbjct: 208 GESKNIVQLGIPSNDEAAIVNSEVQEEIKATSNNNNIDANNSI---SETIKEEAAKLSSE 264
Query: 1056 LAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDD--CLMSENETNKVLSNNGKS 883
+ + E + S ++ + + +S N D + + + +N S
Sbjct: 265 VDAEIINGENSISEPVKVGAAILKSEAKEESMASSDNRHDGNSISQPIKEGRCFQDNETS 324
Query: 882 GMAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYV 703
++ QNE V S S ++DK E K +GSGFCYG+KE+ RFNRIL YV
Sbjct: 325 ESTPDSRASAQNEPGV--SHSEQSDK-----GENKLEKGSGFCYGDKERERFNRILGHYV 377
Query: 702 GTHNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGL 523
GTHNFHNFTTRIKAEDPSA+RFI+SFD NT V VEGIEFVKCEVVGQSFMLHQIRKMIGL
Sbjct: 378 GTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGL 437
Query: 522 AVAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAY 343
AVAIMRN APESL+ETAL K+VNI VPTAPEVGLYLDECFF+SYN KW+D+HEEVSMKAY
Sbjct: 438 AVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHEEVSMKAY 497
Query: 342 EDEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 175
+EAEEFKMKH+Y HI +TE+KEG VALWLHSLNHRNYPDL + +G +DGK+ E
Sbjct: 498 AEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDLCIGDNGAASDGKNGE 553
>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 621
Score = 601 bits (1549), Expect = e-169
Identities = 332/568 (58%), Positives = 394/568 (69%), Gaps = 35/568 (6%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEAL+LSGAVPEQ+R KRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEQDRYCPKRYDWARSARTDKGVSA 118
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPGLV+RLNS L+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGLVERLNSKLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 178
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1234
DP SHP+RE+VLAS+GSE+ELVKC+ECS+RGRKV G+MGKRS+E + ++ +
Sbjct: 179 DPSSHPNRESVLASLGSESELVKCVECSERGRKVPGLMGKRSYELTGASFDSGISLNICD 238
Query: 1233 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQ---DTILSSD--PMKVSSVTIEDEEAN 1069
+ +N S N D+ +SS+ KV SV D E N
Sbjct: 239 AKVDSVVSDENVVASINDIGEVKVENGDSETNHASFDSGISSNICDAKVDSVENGDSETN 298
Query: 1068 -AEEKLAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSEN---ETNKVL 901
A L S+ + V ++ +AS+N + EN ETN+
Sbjct: 299 RASFDLGISSNICDAKVDSVVTE-----------ENRVASVNGVGEVKVENGDSETNRAS 347
Query: 900 SNNGKSGMAVETMV-----------CVQNEGTV-LESGSMENDKV---TVKDE------- 787
N+G S +T V V +G V +E+G E ++V T+ +E
Sbjct: 348 FNSGISSNICDTKVVSVVRDENGVASVNGDGEVKVENGDSETNQVEGRTLDNEVSTGEEG 407
Query: 786 ----EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFIISFDA 619
E+KP + S F YGEKE+ RFNRIL Y GTHNFHNFTTR KAEDP+A+RFIISF+A
Sbjct: 408 NVNGEQKPEKRSDFSYGEKERERFNRILKHYEGTHNFHNFTTRTKAEDPAAQRFIISFNA 467
Query: 618 NTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVNITVPT 439
NT + VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNC PESL+E ALQK+VNI +PT
Sbjct: 468 NTVIPVEGMEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCVPESLMENALQKDVNINIPT 527
Query: 438 APEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKEGSVAL 259
APEVGLYLDEC F+SYN KWKD+HEE+SMKAY +EAEEFKMKHIY HIG TE KEG VAL
Sbjct: 528 APEVGLYLDECLFSSYNKKWKDSHEEMSMKAYAEEAEEFKMKHIYSHIGLTEQKEGVVAL 587
Query: 258 WLHSLNHRNYPDLRVVKDGITTDGKSAE 175
WLHSLN+RNYPD + V + TT+ S +
Sbjct: 588 WLHSLNYRNYPDFQAVDNKNTTNNNSTD 615
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
Length = 519
Score = 599 bits (1544), Expect = e-168
Identities = 324/526 (61%), Positives = 369/526 (70%), Gaps = 3/526 (0%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60 FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1234
DP H DRE+V AS+GS+NELVKCLECS+RGRKV G+MGKR+FE + +E+ +
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITESDISSNIVN 239
Query: 1233 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIED---EEANAE 1063
+ D + +D+ +SD K +SV +E+ E A
Sbjct: 240 AI-------------------EVSDVQANGVLEDSATTSDSNKQTSVLVENTATELTVAS 280
Query: 1062 EKLAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKS 883
E +AK SS M+ L ND ++ E S NGK
Sbjct: 281 EGIAKSESSE------------------------MSGLGNDSEIVVSKE-----SVNGK- 310
Query: 882 GMAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYV 703
EKP+ F YGE+EK RFNRIL YV
Sbjct: 311 ---------------------------------EKPS--GSFKYGEEEKARFNRILKHYV 335
Query: 702 GTHNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGL 523
GTHNFHNFTTR KAEDP+A+RFI+SFDA+TTV VEGIEFVKCEVVGQSFMLHQIRKM+GL
Sbjct: 336 GTHNFHNFTTRTKAEDPAARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGL 395
Query: 522 AVAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAY 343
AVAIMRNCAPESLIE ALQK+VNI VPTAPEVGLYLDEC FTSYN KWKDTHEEVSMKAY
Sbjct: 396 AVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAY 455
Query: 342 EDEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKD 205
E+ AE+FKMK IY HI STE+K+G+VALWLHSLNHRNYPDLRV+ +
Sbjct: 456 EEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDE 501
>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 584
Score = 591 bits (1523), Expect = e-166
Identities = 325/541 (60%), Positives = 378/541 (69%), Gaps = 5/541 (0%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAVPEQ+RG KRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDWARSARTDKGVSA 118
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQV+SGRFYVDPPGLVDRLNS L SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVISGRFYVDPPGLVDRLNSILPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 178
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1234
DP SH DRE+VLAS+GS +ELVKCLECS+RGRKV+G +GKRSFE
Sbjct: 179 DPSSHRDRESVLASLGSGDELVKCLECSERGRKVIGAVGKRSFE---------------- 222
Query: 1233 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKL 1054
SKS Q IL + +++ I+++ + + +
Sbjct: 223 --------------------------SKSEAFQTDILLNGGCAIANCEIKEDISMSMDNA 256
Query: 1053 AKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMA 874
SE + H+E + +++ D ++S +E V S++ + +
Sbjct: 257 HGVRMHSEFVEQTNVS--------HNEDSETESAMPRTD-ILSNSEDGNVKSDSKQEEVM 307
Query: 873 VETMVCVQNEGTVLESGSMEND-KVTVKDE----EEKPARGSGFCYGEKEKVRFNRILNS 709
V +G ES +ME D K +V +E EE +GS FCYGE+EK +FNRIL
Sbjct: 308 VSEDAA---DGGNKESETMEKDSKASVGEERVNGEEHVMKGSEFCYGEEEKEKFNRILKY 364
Query: 708 YVGTHNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMI 529
YVG+HNFHNFTTR KAEDPSA+R+IISFDA TTV VEGIEFVKCEV+GQSFMLHQIRKMI
Sbjct: 365 YVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEFVKCEVIGQSFMLHQIRKMI 424
Query: 528 GLAVAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMK 349
GLAVAIMRNCAPESLI TALQK+V I VPTAPEVGLYLDECFFTSYN KWKD HEE+ MK
Sbjct: 425 GLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDECFFTSYNQKWKD-HEELCMK 483
Query: 348 AYEDEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAEGV 169
YE+ AE+FKMK+IY HI STE KEG V LWLHSLN+RNYPDLR + KS E V
Sbjct: 484 DYEEVAEDFKMKYIYSHIASTEQKEGVVGLWLHSLNYRNYPDLRFCYTLDANNEKSTEVV 543
Query: 168 D 166
+
Sbjct: 544 N 544
>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028255|gb|ESW26895.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 556
Score = 589 bits (1519), Expect = e-165
Identities = 314/535 (58%), Positives = 365/535 (68%), Gaps = 2/535 (0%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPE +RG KRYDWARSARTDKGVSA
Sbjct: 28 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSA 87
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 88 VGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFAL 147
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 1240
DPC H DRETV+AS+GS NELVKCLECS+RGRKVVG++G K + E A++ E +
Sbjct: 148 DPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAGISSNT 207
Query: 1239 XXXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEE 1060
D++H + + N+ +L + N +
Sbjct: 208 DVVLDSVVTGDVEASLSKG--DDNHLNGESGIDNKGKVLV-------------DGTNLKT 252
Query: 1059 KLAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSG 880
+ KG ++++ L S+NN D + E + S +G
Sbjct: 253 GIEKGIPVQDEVMPLNG-----------------ESVNNSDIIEEEKMNGEDKSTSG--- 292
Query: 879 MAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVG 700
+M C YGEKE+ RFN+ILN +VG
Sbjct: 293 ----SMFC----------------------------------YGEKERERFNKILNCFVG 314
Query: 699 THNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLA 520
THNFHNFTTR KAEDP+A+R+IISF+ANT VEGIEFVKCEVVGQSFMLHQIRKM+GLA
Sbjct: 315 THNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLA 374
Query: 519 VAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYE 340
VAIMRNCAPESLI ALQ++VNI VPTAPEVGLYLDECFF+SYN KWKD+HEE+SMKAYE
Sbjct: 375 VAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYE 434
Query: 339 DEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 175
EAEEFKMK+IY HI TE KEG+VALWLHSLNHRNYPDLRVV + TD KSA+
Sbjct: 435 KEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNKSAD 489
>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|593783723|ref|XP_007154902.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028254|gb|ESW26894.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028256|gb|ESW26896.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 586
Score = 589 bits (1519), Expect = e-165
Identities = 314/535 (58%), Positives = 365/535 (68%), Gaps = 2/535 (0%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPE +RG KRYDWARSARTDKGVSA
Sbjct: 58 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSA 117
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 118 VGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFAL 177
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 1240
DPC H DRETV+AS+GS NELVKCLECS+RGRKVVG++G K + E A++ E +
Sbjct: 178 DPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAGISSNT 237
Query: 1239 XXXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEE 1060
D++H + + N+ +L + N +
Sbjct: 238 DVVLDSVVTGDVEASLSKG--DDNHLNGESGIDNKGKVLV-------------DGTNLKT 282
Query: 1059 KLAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSG 880
+ KG ++++ L S+NN D + E + S +G
Sbjct: 283 GIEKGIPVQDEVMPLNG-----------------ESVNNSDIIEEEKMNGEDKSTSG--- 322
Query: 879 MAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVG 700
+M C YGEKE+ RFN+ILN +VG
Sbjct: 323 ----SMFC----------------------------------YGEKERERFNKILNCFVG 344
Query: 699 THNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLA 520
THNFHNFTTR KAEDP+A+R+IISF+ANT VEGIEFVKCEVVGQSFMLHQIRKM+GLA
Sbjct: 345 THNFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLA 404
Query: 519 VAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYE 340
VAIMRNCAPESLI ALQ++VNI VPTAPEVGLYLDECFF+SYN KWKD+HEE+SMKAYE
Sbjct: 405 VAIMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYE 464
Query: 339 DEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 175
EAEEFKMK+IY HI TE KEG+VALWLHSLNHRNYPDLRVV + TD KSA+
Sbjct: 465 KEAEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNKSAD 519
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 588 bits (1517), Expect = e-165
Identities = 320/523 (61%), Positives = 367/523 (70%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60 FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1234
DP H DRE+V AS+GS+NELVKCLECS+RGRKV G++GKR+FE + +E+ +
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVN 239
Query: 1233 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKL 1054
+ D + +D+ +SD K +SV +E N +L
Sbjct: 240 AI-------------------EVSDVQANGVLEDSATTSDSNKQTSVLVE----NTATEL 276
Query: 1053 AKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMA 874
GS + K SE + M+ L +D ++ E S NGK
Sbjct: 277 NVGSEGTAK----------------SESSE-MSGLGSDSEIVVSKE-----SVNGKE--- 311
Query: 873 VETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGTH 694
SGS F YGE+EK RFNRIL YVGTH
Sbjct: 312 -------------KSSGS--------------------FKYGEEEKARFNRILKHYVGTH 338
Query: 693 NFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVA 514
NFHNFTTR KAEDP+A+RFI+SFDA+ V VEGIEFVKCEVVGQSFMLHQIRKM+GLAVA
Sbjct: 339 NFHNFTTRTKAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVA 398
Query: 513 IMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDE 334
IMRNCAPESLIE ALQK+VNI VPTAPEVGLYLDEC FTSYN KWKDTHEEVSMKAYE+
Sbjct: 399 IMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEA 458
Query: 333 AEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKD 205
AE+FKMK IY HI STE+K+G+VALWLHSLNHRNYPDLRV+ +
Sbjct: 459 AEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDE 501
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
sativus]
Length = 519
Score = 588 bits (1517), Expect = e-165
Identities = 320/523 (61%), Positives = 367/523 (70%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60 FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1234
DP H DRE+V AS+GS+NELVKCLECS+RGRKV G++GKR+FE + +E+ +
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVN 239
Query: 1233 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKL 1054
+ D + +D+ +SD K +SV +E N +L
Sbjct: 240 AI-------------------EVSDVQANGVLEDSATTSDSNKQTSVLVE----NTATEL 276
Query: 1053 AKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMA 874
GS + K SE + M+ L +D ++ E S NGK
Sbjct: 277 NVGSEGTAK----------------SESSE-MSGLGSDSEIVVSKE-----SVNGKE--- 311
Query: 873 VETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGTH 694
SGS F YGE+EK RFNRIL YVGTH
Sbjct: 312 -------------KSSGS--------------------FKYGEEEKARFNRILKHYVGTH 338
Query: 693 NFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVA 514
NFHNFTTR KAEDP+A+RFI+SFDA+ V VEGIEFVKCEVVGQSFMLHQIRKM+GLAVA
Sbjct: 339 NFHNFTTRTKAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVA 398
Query: 513 IMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDE 334
IMRNCAPESLIE ALQK+VNI VPTAPEVGLYLDEC FTSYN KWKDTHEEVSMKAYE+
Sbjct: 399 IMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEA 458
Query: 333 AEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKD 205
AE+FKMK IY HI STE+K+G+VALWLHSLNHRNYPDLRV+ +
Sbjct: 459 AEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPDLRVIDE 501
>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
gi|550344062|gb|EEE79946.2| hypothetical protein
POPTR_0002s01580g [Populus trichocarpa]
Length = 516
Score = 562 bits (1449), Expect = e-157
Identities = 306/534 (57%), Positives = 365/534 (68%), Gaps = 1/534 (0%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEALF +GAVPEQ+RG KRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRGIPKRYDWARSARTDKGVSA 118
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPGLV+RL+SNL+ Q RIFG+KRVT +F+AKKFCDRRR
Sbjct: 119 VGQVVSGRFYIDPPGLVERLHSNLSPQFRIFGYKRVTGSFNAKKFCDRRR---------- 168
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 1234
E+VLAS+ S +EL+KCLECS+RGRKV G +GKRSFE +S
Sbjct: 169 --------ESVLASLRSGSELIKCLECSERGRKVAGAVGKRSFELADNSS---------- 210
Query: 1233 XXXXXXXXXXXXXXXXXSLDNDHDDNSKS-VQNQDTILSSDPMKVSSVTIEDEEANAEEK 1057
ND D + KS ++ + +L + ++ I + E E K
Sbjct: 211 --------------------NDKDASVKSEIKEEVGVLLDNGLE----DIRNSETVNETK 246
Query: 1056 LAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGM 877
+ + S K VM + + S N++D ++ ++++ +
Sbjct: 247 IFQNDGSGSKSVM----------------PESVISSNSEDANVNPESKDEIIVS------ 284
Query: 876 AVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGT 697
+E+G E K +E+ +GS FCYGEKEK RFNRIL YVG+
Sbjct: 285 --------------VENGDDEKTK-----SKEEMVKGSSFCYGEKEKERFNRILGYYVGS 325
Query: 696 HNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAV 517
HNFHNFTTR KAEDPSA+R+I+SF+A TTVNVEGIEFVKCEVVGQSFMLHQIRKMIG+AV
Sbjct: 326 HNFHNFTTRTKAEDPSARRYIVSFEAKTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGVAV 385
Query: 516 AIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYED 337
AIMRNCAPESLI+TALQK+VNI VPTAPEVGLYLDECFFTSYN KWKD+HEE+SMK YE+
Sbjct: 386 AIMRNCAPESLIQTALQKDVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEEISMKDYEE 445
Query: 336 EAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 175
EAE+FKMKHIY HI +TE+KEGSVALWLHSLNHRNYPDLRV T D ++E
Sbjct: 446 EAEDFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYPDLRVSN---TVDNNNSE 496
>ref|NP_001047686.1| Os02g0668400 [Oryza sativa Japonica Group]
gi|50251324|dbj|BAD28300.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|50252138|dbj|BAD28134.1| putative pseudouridine
synthase 1 [Oryza sativa Japonica Group]
gi|113537217|dbj|BAF09600.1| Os02g0668400 [Oryza sativa
Japonica Group]
Length = 581
Score = 531 bits (1368), Expect = e-148
Identities = 288/538 (53%), Positives = 353/538 (65%), Gaps = 5/538 (0%)
Frame = -1
Query: 1764 YCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAVGQ 1585
YCG GYQGMQKNPGA+TIE DLEEAL+ +GAVPE +R +RYDWAR+ARTDKGVSA Q
Sbjct: 57 YCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRYDWARAARTDKGVSAAAQ 116
Query: 1584 VVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALDPC 1405
VVSGRFYVDPP DRLN+ LA QIR FG+ RVT +F+AKKFCDRRRYVYL+P FALDP
Sbjct: 117 VVSGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPS 176
Query: 1404 SHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRS-FEFRALNSETVVDXXXXXXX 1228
+HPDRE V+ASVGS +EL KCLECS+RGRKV GVMG+ AL E V+
Sbjct: 177 AHPDREAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAA 236
Query: 1227 XXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKLAK 1048
+ ++ D N D + + I D E N + +
Sbjct: 237 ----------------VGSNEDANCDPASTGDRSVD--------LPIPDNETNTQITEMR 272
Query: 1047 GSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE 868
+ + + V L S + V LN+D S++ K G ++E
Sbjct: 273 SNGAEKCDVQLSGGTLCSEAVPASNSETVCPILNSDSNTNSDSVDVDPSFVAEKKG-SIE 331
Query: 867 TMVCVQNEGTVLESGSMENDKVTVKDE----EEKPARGSGFCYGEKEKVRFNRILNSYVG 700
T+V + ++ + + K V E EE P R S F Y + K RFNRIL YVG
Sbjct: 332 TVVTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLR-SAFSYTHEVKERFNRILKKYVG 390
Query: 699 THNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLA 520
THNFHNFTTR KAEDP+AKRFIISF A+ VN++GI+F++CEVVGQSFMLHQIRKMIGLA
Sbjct: 391 THNFHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLA 450
Query: 519 VAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYE 340
VA+MRNCAPES+ + A +K+VN+ VPTAPEVGLYLDEC FTSYN KWKD+HE VSM+ Y
Sbjct: 451 VAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYS 510
Query: 339 DEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAEGVD 166
+EAEEFK+K+I+PHI + E+KEG+VALWLHSLN RNYPD R + D T+ A V+
Sbjct: 511 EEAEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYM-DNAGTEASIAAAVE 567
>gb|EEC73751.1| hypothetical protein OsI_08404 [Oryza sativa Indica Group]
Length = 581
Score = 530 bits (1365), Expect = e-147
Identities = 288/538 (53%), Positives = 353/538 (65%), Gaps = 5/538 (0%)
Frame = -1
Query: 1764 YCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAVGQ 1585
YCG GYQGMQKNPGA+TIE DLEEAL+ +GAVPE +R +RYDWAR+ARTDKGVSA Q
Sbjct: 57 YCGAGYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRYDWARAARTDKGVSAAAQ 116
Query: 1584 VVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALDPC 1405
VVSGRFYVDPP DRLN+ LA QIR FG+ RVT +F+AKKFCDRRRYVYL+P FALDP
Sbjct: 117 VVSGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPS 176
Query: 1404 SHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRS-FEFRALNSETVVDXXXXXXX 1228
+HPDRE V+ASVGS +EL KCLECS+RGRKV GVMG+ AL E V+
Sbjct: 177 AHPDREAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAA 236
Query: 1227 XXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKLAK 1048
+ ++ D N D + + I D E N + +
Sbjct: 237 ----------------VGSNEDANCDPASTGDRSVD--------LPIPDNETNTQITEMR 272
Query: 1047 GSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE 868
+ + + V L S + V LN+D S++ K G ++E
Sbjct: 273 SNGAEKCDVQLSGGTLCSEAVPASISETVCPILNSDSNTNSDSVDVDPSFVAEKKG-SIE 331
Query: 867 TMVCVQNEGTVLESGSMENDKVTVKDE----EEKPARGSGFCYGEKEKVRFNRILNSYVG 700
T+V + ++ + + K V E EE P R S F Y + K RFNRIL YVG
Sbjct: 332 TVVTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLR-SAFSYTHEVKERFNRILKKYVG 390
Query: 699 THNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLA 520
THNFHNFTTR KAEDP+AKRFIISF A+ VN++GI+F++CEVVGQSFMLHQIRKMIGLA
Sbjct: 391 THNFHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLA 450
Query: 519 VAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYE 340
VA+MRNCAPES+ + A +K+VN+ VPTAPEVGLYLDEC FTSYN KWKD+HE VSM+ Y
Sbjct: 451 VAVMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYS 510
Query: 339 DEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAEGVD 166
+EAEEFK+K+I+PHI + E+KEG+VALWLHSLN RNYPD R + D T+ A V+
Sbjct: 511 EEAEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYM-DNAGTEASIAAAVE 567
>ref|XP_002889060.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297334901|gb|EFH65319.1| tRNA pseudouridine
synthase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 458
Score = 526 bits (1354), Expect = e-146
Identities = 287/518 (55%), Positives = 344/518 (66%), Gaps = 1/518 (0%)
Frame = -1
Query: 1770 FAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAV 1591
FA+CGVGYQGMQKNPGAKTIE +LEEALF +GAVPE RG K YD+ARSARTDKGVSAV
Sbjct: 28 FAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPESIRGKPKLYDFARSARTDKGVSAV 87
Query: 1590 GQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALD 1411
GQVVSGRF VDPPG VDRLNSNL +QIRIFG+K VTP+FS+KKFCDRRRYVYL+P FALD
Sbjct: 88 GQVVSGRFNVDPPGFVDRLNSNLPNQIRIFGYKHVTPSFSSKKFCDRRRYVYLLPVFALD 147
Query: 1410 PCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXXX 1231
P SH DRETV+AS+G E VKC ECS+RGRK+ G++G ++ N T
Sbjct: 148 PISHRDRETVMASLGPGEEYVKCFECSERGRKIPGLVG----NWKGTNFVT--------- 194
Query: 1230 XXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKV-SSVTIEDEEANAEEKL 1054
KS+ Q ILS++ + + V IE +N L
Sbjct: 195 --------------------------KSLDFQSDILSNNSSALRTDVKIEALSSN----L 224
Query: 1053 AKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMA 874
A SS ++ S+ D C ++ N T K+ NG+ +
Sbjct: 225 ASLSSVDVEV----------------------GSIQEDSCKLNTNSTEKI---NGEGNVM 259
Query: 873 VETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGTH 694
ET S FCYGEKEK RFNRIL+ YVG++
Sbjct: 260 AETK--------------------------------SKFCYGEKEKERFNRILSCYVGSY 287
Query: 693 NFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVA 514
NFHNFTTR KA+DP+A R IISF ANT +N++GI+F+KCEV+G+SFMLHQIRKM+GLAVA
Sbjct: 288 NFHNFTTRTKADDPAANRQIISFTANTVINLDGIDFIKCEVLGKSFMLHQIRKMMGLAVA 347
Query: 513 IMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDE 334
IMRNCA ESLI+TA K+VNITVP APEVGLYLDECFFTSYN K++D+HEEVSM+AY++E
Sbjct: 348 IMRNCASESLIQTAFSKDVNITVPMAPEVGLYLDECFFTSYNKKFEDSHEEVSMEAYKEE 407
Query: 333 AEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDL 220
AE FK+KHIY HI +TE K G++ALWLHSLN+RNYPDL
Sbjct: 408 AEAFKLKHIYSHICATERKYGNMALWLHSLNYRNYPDL 445
>ref|XP_006307113.1| hypothetical protein CARUB_v10008701mg [Capsella rubella]
gi|482575824|gb|EOA40011.1| hypothetical protein
CARUB_v10008701mg [Capsella rubella]
Length = 574
Score = 519 bits (1336), Expect = e-144
Identities = 281/520 (54%), Positives = 343/520 (65%), Gaps = 2/520 (0%)
Frame = -1
Query: 1770 FAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAV 1591
FA+CGVGYQGMQKNPGAKTIE +LEEALF +GAVPE +R + Y+WARSARTDKGVSAV
Sbjct: 64 FAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPEADRNKPRSYEWARSARTDKGVSAV 123
Query: 1590 GQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALD 1411
GQVVSGRFYVDPPG V+RLNSNL QIR+FG+KRV P+FS+KKFCDRRRYVYLIP FALD
Sbjct: 124 GQVVSGRFYVDPPGFVERLNSNLPDQIRVFGYKRVAPSFSSKKFCDRRRYVYLIPVFALD 183
Query: 1410 PCSHPDRETVLASVGSENELVKCLECSDRGRKV-VGVMGKRSFEFRALNSETVVDXXXXX 1234
PC H + E V +G E VKC+ECS+ G K+ VGVMGK
Sbjct: 184 PCVHSEAEMVRTDLGYE--YVKCVECSENGYKIPVGVMGK-------------------- 221
Query: 1233 XXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANA-EEK 1057
D D ++KS++ Q I S+ S+ I+D ++ A
Sbjct: 222 ---------------------DTDCDAKSLEIQSDISHSN---CDSLGIDDVKSEALSSS 257
Query: 1056 LAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGM 877
++ G + V+ + DV A + T + ++ KS
Sbjct: 258 VSNGDDNLNSEVL--------------DGADVAARV----------VTEETPDSSSKSED 293
Query: 876 AVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGT 697
E + E L G M+N +E + FCYGEKEK RFNRIL+ YVG+
Sbjct: 294 MEELNLDSSKESDTLAKGEMKN-------KERRDMTEGNFCYGEKEKERFNRILSYYVGS 346
Query: 696 HNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAV 517
HNFHNFTTR KA DP+A R+I+SF+ANT +N++G +FVKCEVVGQSFMLHQIRKMIGLAV
Sbjct: 347 HNFHNFTTRTKAADPAANRYILSFNANTVINLDGKDFVKCEVVGQSFMLHQIRKMIGLAV 406
Query: 516 AIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYED 337
A+MRN APE+LIETA +K+V I VP APEVGLYLDECFFTSYN ++K +HEEVSM+ Y++
Sbjct: 407 AVMRNYAPETLIETAFKKDVRINVPMAPEVGLYLDECFFTSYNKRFKGSHEEVSMEEYKE 466
Query: 336 EAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLR 217
AEEFK KH+Y HIGS E K+G+VA+WLHSLNHRNYPDLR
Sbjct: 467 VAEEFKWKHVYSHIGSAEEKDGAVAIWLHSLNHRNYPDLR 506
>gb|EYU17545.1| hypothetical protein MIMGU_mgv1a003821mg [Mimulus guttatus]
Length = 562
Score = 518 bits (1335), Expect = e-144
Identities = 289/559 (51%), Positives = 360/559 (64%), Gaps = 23/559 (4%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEAL+LSGA+PE+ERG KRY+WARSARTDKGVSA
Sbjct: 51 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAIPEEERGLHKRYEWARSARTDKGVSA 110
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFYVDPPG ++RL+S+L+ QIRIFG+KRVTP+F+AKKFCDRRRY
Sbjct: 111 VGQVVSGRFYVDPPGFIERLHSHLSPQIRIFGYKRVTPSFNAKKFCDRRRY--------- 161
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGK-RSFEFRALNSETVVDXXXX 1237
CLECS+RGRKV GVMGK R+FE +A +
Sbjct: 162 -----------------------CLECSERGRKVFGVMGKQRNFESKAPGEGENENVEVG 198
Query: 1236 XXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEK 1057
+ D ++V+ ILS++ S T E AN+ E
Sbjct: 199 SGISSNNGTGSF----------ESKDVGENVEVGSGILSNNG---SPPTDEKVVANSLEN 245
Query: 1056 LAKGSSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSEN----ETNKVLSNNG 889
GS+ SE + + + + +V ++ D ++S+N + +K + ++
Sbjct: 246 NEIGSNGSENVSI---------GAAQDDKMEVDKAVLVDSAILSDNVSVLDESKTVVDSS 296
Query: 888 KSGMAVETMVCVQNEGTVLESGSMENDKVTVKDEEEKPARG------------------S 763
+ G+ E T LE+GS E +K+ +E R S
Sbjct: 297 EKGI----------ENTDLENGSSETEKLLETGDESIEKRNVDKLESENANGHTEAEKKS 346
Query: 762 GFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFV 583
FCYGE+EK RFNRIL Y GTHNFHNFTTR KAEDP+A+R+I+SF+ANT VNV+GI+FV
Sbjct: 347 EFCYGEEEKARFNRILKFYEGTHNFHNFTTRTKAEDPAARRYILSFNANTVVNVDGIDFV 406
Query: 582 KCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECF 403
KCEVVGQSFMLHQIRKMIGLAVA+MRN PES +ETA ++V VP APEVGLYLDECF
Sbjct: 407 KCEVVGQSFMLHQIRKMIGLAVAMMRNITPESKMETAFLQSVRFNVPMAPEVGLYLDECF 466
Query: 402 FTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPD 223
F+SYNNKWKD+HEEVSMKAY +E+EEFKMK+IYPH+ S+E+K+G+VALWLHSLN+RN+PD
Sbjct: 467 FSSYNNKWKDSHEEVSMKAYAEESEEFKMKYIYPHVASSEHKDGAVALWLHSLNYRNFPD 526
Query: 222 LRVVKDGITTDGKSAEGVD 166
LR +DG E V+
Sbjct: 527 LRAADSEPVSDGNGTEIVN 545
>ref|XP_004953401.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Setaria
italica]
Length = 538
Score = 513 bits (1320), Expect = e-142
Identities = 280/519 (53%), Positives = 339/519 (65%)
Frame = -1
Query: 1764 YCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAVGQ 1585
YCG GYQGMQKNPGA+TIE DLEEAL+ +GAVPE +R +RYDWAR+ARTDKGVSA Q
Sbjct: 55 YCGAGYQGMQKNPGARTIEGDLEEALYQAGAVPEADRAAPRRYDWARAARTDKGVSAAAQ 114
Query: 1584 VVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALDPC 1405
VVSGRFYVDPPG +DRLN+ LA QI +G+ RVT +FSAKKFCDRRRY+YL+P FALDP
Sbjct: 115 VVSGRFYVDPPGFIDRLNAQLAPQIHAYGYVRVTNSFSAKKFCDRRRYLYLLPVFALDPS 174
Query: 1404 SHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXXXXX 1225
+HPDRE V+AS+GS +EL KCLECS+RGRKV GVMG+ L S V
Sbjct: 175 AHPDREAVMASMGSGSELTKCLECSERGRKVPGVMGREG----KLPSPGV---------- 220
Query: 1224 XXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKLAKG 1045
N HD++ DP +V+ E + NAE G
Sbjct: 221 ------NGTDAPVEGTVNTHDESGSI-----GAAKGDP----TVSEETQAGNAE----LG 261
Query: 1044 SSSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMAVET 865
S+ + +V S D AS+ N++ N A E
Sbjct: 262 SNGASDVV-------------PSGSADADASIGNEE--------------NKLEATATEE 294
Query: 864 MVCVQNEGTVLESGSMENDKVTVKDEEEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFH 685
V +G E+ + E T D F Y ++ K RFNRIL YVGTHNFH
Sbjct: 295 KV----QGMDFENSNGEEKPPTKSD----------FSYNDEMKERFNRILKYYVGTHNFH 340
Query: 684 NFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMR 505
NFTTR KAEDP+AKRFIISF A+ V+++GI+FV+CEVVGQSFMLHQIRKMIGLAVA+MR
Sbjct: 341 NFTTRTKAEDPAAKRFIISFAADRVVSLDGIDFVRCEVVGQSFMLHQIRKMIGLAVAVMR 400
Query: 504 NCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEE 325
NCAPES+ + A +K+V + VPTAPEVGLYLDEC FTSYN KWKD+HE VSM+ Y +EAEE
Sbjct: 401 NCAPESIYDVAFRKDVKLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYCEEAEE 460
Query: 324 FKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVK 208
FK+K+I+PHI + E+KEG+VALWLHSLNHRNYPD R ++
Sbjct: 461 FKVKYIFPHIAAMEHKEGAVALWLHSLNHRNYPDFRYME 499
>gb|EAZ24127.1| hypothetical protein OsJ_07867 [Oryza sativa Japonica Group]
Length = 518
Score = 471 bits (1213), Expect = e-130
Identities = 270/536 (50%), Positives = 333/536 (62%), Gaps = 11/536 (2%)
Frame = -1
Query: 1740 MQKNPGAKTIEADLEEALFLSGAVPEQERG------NSKRYDWARSARTDKGVSAVGQVV 1579
MQKNPGA+TIE D GA+P + G AR+ARTDKGVSA QVV
Sbjct: 1 MQKNPGARTIEGDPG-----GGALPGRRPGPRPNAPGPAATTGARAARTDKGVSAAAQVV 55
Query: 1578 SGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALDPCSH 1399
SGRFYVDPP DRLN+ LA QIR FG+ RVT +F+AKKFCDRRRYVYL+P FALDP +H
Sbjct: 56 SGRFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPSAH 115
Query: 1398 PDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRS-FEFRALNSETVVDXXXXXXXXX 1222
PDRE V+ASVGS +EL KCLECS+RGRKV GVMG+ AL E V+
Sbjct: 116 PDREAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAA-- 173
Query: 1221 XXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVTIEDEEANAEEKLAKGS 1042
+ ++ D N D + + I D E N + + +
Sbjct: 174 --------------VGSNEDANCDPASTGDRSVD--------LPIPDNETNTQITEMRSN 211
Query: 1041 SSSEKIVMLXXXXXXXXXXSHSEVKDVMASLNNDDCLMSENETNKVLSNNGKSGMAVETM 862
+ + V L S + V LN+D S++ K G ++ET+
Sbjct: 212 GAEKCDVQLSGGTLCSEAVPASNSETVCPILNSDSNTNSDSVDVDPSFVAEKKG-SIETV 270
Query: 861 VCVQNEGTVLESGSMENDKVTVKDE----EEKPARGSGFCYGEKEKVRFNRILNSYVGTH 694
V + ++ + + K V E EE P R S F Y + K RFNRIL YVGTH
Sbjct: 271 VTEDGKKQAMDVVTEDEKKQDVDYEGSSLEEMPLR-SAFSYTHEVKERFNRILKKYVGTH 329
Query: 693 NFHNFTTRIKAEDPSAKRFIISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVA 514
NFHNFTTR KAEDP+AKRFIISF A+ VN++GI+F++CEVVGQSFMLHQIRKMIGLAVA
Sbjct: 330 NFHNFTTRTKAEDPAAKRFIISFAADRVVNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVA 389
Query: 513 IMRNCAPESLIETALQKNVNITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDE 334
+MRNCAPES+ + A +K+VN+ VPTAPEVGLYLDEC FTSYN KWKD+HE VSM+ Y +E
Sbjct: 390 VMRNCAPESIYDVAFRKDVNLNVPTAPEVGLYLDECMFTSYNKKWKDSHEAVSMEPYSEE 449
Query: 333 AEEFKMKHIYPHIGSTENKEGSVALWLHSLNHRNYPDLRVVKDGITTDGKSAEGVD 166
AEEFK+K+I+PHI + E+KEG+VALWLHSLN RNYPD R + D T+ A V+
Sbjct: 450 AEEFKLKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYM-DNAGTEASIAAAVE 504
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
[Medicago truncatula]
Length = 530
Score = 362 bits (929), Expect = 4e-97
Identities = 186/271 (68%), Positives = 215/271 (79%), Gaps = 9/271 (3%)
Frame = -1
Query: 969 KDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE-----TMVCVQNEGTVLESGSMENDK 805
KDV SL+ D +N NK N+ + ++VE T+V Q+E + GS N
Sbjct: 247 KDVEVSLSKGD----DNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPINGGSENNLG 302
Query: 804 VTVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFI 634
+ +++ E+ A GSGFCYGEKE+ RFN IL YVGTHNFHNFTTRIK EDPSAKRFI
Sbjct: 303 ILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFI 362
Query: 633 ISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVN 454
ISFDA+TTV VEG+EFVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLIE ALQK+V+
Sbjct: 363 ISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVS 422
Query: 453 ITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKE 274
ITVPTAPEVGLYLDECFFTSYN KWKDTHEEVSMKAYE EAE+FKM++IYPHI STE KE
Sbjct: 423 ITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKE 482
Query: 273 GSVALWLHSLNHRNYPDLRVVK-DGITTDGK 184
G+V LWLHSLNHRNYPDLR++ +G+T D K
Sbjct: 483 GTVGLWLHSLNHRNYPDLRILDGEGVTNDKK 513
Score = 298 bits (764), Expect = 5e-78
Identities = 162/262 (61%), Positives = 186/262 (70%), Gaps = 18/262 (6%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE +LEEAL++SGAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 59 FFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSA 118
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPG VDRLNSNL SQIRIFGFKRVT +FSAKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFAL 178
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRAL-------NSE 1261
DPC H DRETVLAS+GSENELVKCL CS+RGRKV GV+G KR+ E A+ N
Sbjct: 179 DPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKN 238
Query: 1260 TVVDXXXXXXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVT--- 1090
VVD S++++ S N T++ SD +V+ +
Sbjct: 239 DVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVV-SDQDEVAPINGGS 297
Query: 1089 ------IEDEEANAEEKLAKGS 1042
+E+E+ N E+ A GS
Sbjct: 298 ENNLGILEEEKVNREDTAANGS 319
>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X2 [Glycine max]
Length = 518
Score = 362 bits (928), Expect = 5e-97
Identities = 182/272 (66%), Positives = 216/272 (79%), Gaps = 7/272 (2%)
Frame = -1
Query: 969 KDVMASLNNDDCLMSENETNKVLSNNGKSGM----AVETMVCVQNEGTVLESGSMENDKV 802
+DV SL+ D +N N+ N+ K GM +ET++ VQ EGT L S+ N +
Sbjct: 210 EDVEVSLSKGD----DNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDI 265
Query: 801 TVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFII 631
+++ E+KP GS FCYGEKE+ RFN+IL +VGTHNFHNFTTR KAEDP+A+R+II
Sbjct: 266 LEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYII 325
Query: 630 SFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVNI 451
SF+ANTT+ VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLI+ ALQ++VNI
Sbjct: 326 SFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNI 385
Query: 450 TVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKEG 271
VPTAPEVGLYLDECFFTSYN KWKD HEE+SMKAYE EA+EFKMK+IY HI STE KEG
Sbjct: 386 NVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEG 444
Query: 270 SVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 175
+VALWLHSLNHRNYPDLRV+ + + KSA+
Sbjct: 445 TVALWLHSLNHRNYPDLRVINEEAIPNNKSAD 476
Score = 294 bits (753), Expect = 9e-77
Identities = 155/258 (60%), Positives = 183/258 (70%), Gaps = 14/258 (5%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPEQ+RG KRYDWARSARTDKGVSA
Sbjct: 25 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSA 84
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 85 VGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 144
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 1240
DP H DRETV+AS+GS NELVKCLECS+RGRKVVG++G K++ E A++ E +
Sbjct: 145 DPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNR 204
Query: 1239 XXXXXXXXXXXXXXXXXXXSLDNDHDDNSKS------------VQNQDTILSSDPMKVSS 1096
+ +DN VQ + T L+ + + S
Sbjct: 205 DSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSD 264
Query: 1095 VTIEDEEANAEEKLAKGS 1042
+ +E+E+ N E+K GS
Sbjct: 265 I-LEEEKVNGEDKPTNGS 281
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
X1 [Glycine max]
Length = 548
Score = 362 bits (928), Expect = 5e-97
Identities = 182/272 (66%), Positives = 216/272 (79%), Gaps = 7/272 (2%)
Frame = -1
Query: 969 KDVMASLNNDDCLMSENETNKVLSNNGKSGM----AVETMVCVQNEGTVLESGSMENDKV 802
+DV SL+ D +N N+ N+ K GM +ET++ VQ EGT L S+ N +
Sbjct: 240 EDVEVSLSKGD----DNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDI 295
Query: 801 TVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFII 631
+++ E+KP GS FCYGEKE+ RFN+IL +VGTHNFHNFTTR KAEDP+A+R+II
Sbjct: 296 LEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYII 355
Query: 630 SFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVNI 451
SF+ANTT+ VEG+EFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLI+ ALQ++VNI
Sbjct: 356 SFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNI 415
Query: 450 TVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKEG 271
VPTAPEVGLYLDECFFTSYN KWKD HEE+SMKAYE EA+EFKMK+IY HI STE KEG
Sbjct: 416 NVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEG 474
Query: 270 SVALWLHSLNHRNYPDLRVVKDGITTDGKSAE 175
+VALWLHSLNHRNYPDLRV+ + + KSA+
Sbjct: 475 TVALWLHSLNHRNYPDLRVINEEAIPNNKSAD 506
Score = 294 bits (753), Expect = 9e-77
Identities = 155/258 (60%), Positives = 183/258 (70%), Gaps = 14/258 (5%)
Frame = -1
Query: 1773 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 1594
FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPEQ+RG KRYDWARSARTDKGVSA
Sbjct: 55 FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSA 114
Query: 1593 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 1414
VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 115 VGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 174
Query: 1413 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 1240
DP H DRETV+AS+GS NELVKCLECS+RGRKVVG++G K++ E A++ E +
Sbjct: 175 DPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNR 234
Query: 1239 XXXXXXXXXXXXXXXXXXXSLDNDHDDNSKS------------VQNQDTILSSDPMKVSS 1096
+ +DN VQ + T L+ + + S
Sbjct: 235 DSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSD 294
Query: 1095 VTIEDEEANAEEKLAKGS 1042
+ +E+E+ N E+K GS
Sbjct: 295 I-LEEEKVNGEDKPTNGS 311
>ref|XP_003610354.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511409|gb|AES92551.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 361
Score = 361 bits (926), Expect = 8e-97
Identities = 186/271 (68%), Positives = 214/271 (78%), Gaps = 9/271 (3%)
Frame = -1
Query: 969 KDVMASLNNDDCLMSENETNKVLSNNGKSGMAVE-----TMVCVQNEGTVLESGSMENDK 805
KDV SL+ D +N NK N + ++VE T+V Q+E + GS N
Sbjct: 78 KDVEVSLSKGD----DNHINKESINYNEGKVSVEEVNSKTVVSDQDEVAPINGGSENNLG 133
Query: 804 VTVKDE---EEKPARGSGFCYGEKEKVRFNRILNSYVGTHNFHNFTTRIKAEDPSAKRFI 634
+ +++ E+ A GSGFCYGEKE+ RFN IL YVGTHNFHNFTTRIK EDPSAKRFI
Sbjct: 134 ILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFI 193
Query: 633 ISFDANTTVNVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIETALQKNVN 454
ISFDA+TTV VEG+EFVKCE+VGQSFMLHQIRKM+GLAVAIMRNCAPESLIE ALQK+V+
Sbjct: 194 ISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVS 253
Query: 453 ITVPTAPEVGLYLDECFFTSYNNKWKDTHEEVSMKAYEDEAEEFKMKHIYPHIGSTENKE 274
ITVPTAPEVGLYLDECFFTSYN KWKDTHEEVSMKAYE EAE+FKM++IYPHI STE KE
Sbjct: 254 ITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKE 313
Query: 273 GSVALWLHSLNHRNYPDLRVVK-DGITTDGK 184
G+V LWLHSLNHRNYPDLR++ +G+T D K
Sbjct: 314 GTVGLWLHSLNHRNYPDLRILDGEGVTNDKK 344
Score = 62.0 bits (149), Expect = 1e-06
Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Frame = -1
Query: 1389 ETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRAL-------NSETVVDXXXX 1237
ETVLAS+GSENELVKCL CS+RGRKV GV+G KR+ E A+ N VVD
Sbjct: 18 ETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVDVENGSSNKNDVVDSGVT 77
Query: 1236 XXXXXXXXXXXXXXXXXXSLDNDHDDNSKSVQNQDTILSSDPMKVSSVT---------IE 1084
S++ + S N T++ SD +V+ + +E
Sbjct: 78 KDVEVSLSKGDDNHINKESINYNEGKVSVEEVNSKTVV-SDQDEVAPINGGSENNLGILE 136
Query: 1083 DEEANAEEKLAKGS 1042
+E+ N E+ A GS
Sbjct: 137 EEKVNREDTAANGS 150