BLASTX nr result
ID: Paeonia22_contig00012820
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00012820
(1113 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis] 663 0.0
ref|XP_007215021.1| hypothetical protein PRUPE_ppa003340mg [Prun... 662 0.0
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi... 662 0.0
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi... 652 0.0
ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutr... 650 0.0
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr... 649 0.0
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi... 647 0.0
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi... 646 0.0
ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu... 645 0.0
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps... 645 0.0
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ... 644 0.0
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar... 642 0.0
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana] 642 0.0
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi... 641 0.0
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi... 635 e-180
ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfam... 634 e-179
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,... 633 e-179
gb|EYU34118.1| hypothetical protein MIMGU_mgv1a003395mg [Mimulus... 629 e-178
ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi... 621 e-175
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi... 615 e-173
>gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]
Length = 688
Score = 663 bits (1711), Expect = 0.0
Identities = 339/370 (91%), Positives = 350/370 (94%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LYTPSVFAYNV +RNVLRAKQW VAHGLFDEMR+RALAPDRYTYSTLIT FGKEGMFDAA
Sbjct: 161 LYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTYSTLITYFGKEGMFDAA 220
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
LSWLQKMEQD VSGDLVLYSNLIELSRKLCDYSKAISIFSRLK SGI PDLVAYNSMINV
Sbjct: 221 LSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKWSGITPDLVAYNSMINV 280
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA LL+ EMR+AGV PDTVSYSTLL MYVENQ+FI+ALSVF EMNEV C LD
Sbjct: 281 FGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEMNEVRCRLD 340
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
LTTCNIMIDVYG LDM KEADRLFWSMRKMGIEP+VVSYNTLLRVYGEAELFGEAIHLFR
Sbjct: 341 LTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFR 400
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
LMQRKDIEQNVVTYNTMIK+YGKSLEHEKATNLVQEMQ RGI+PNAITYSTIISIW KAG
Sbjct: 401 LMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAG 460
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDRAA LFQKLRSSGVEIDQVLYQTMIVAYE+AGLVAHAKRLL ELKRPDNIPRETAIT
Sbjct: 461 KLDRAAILFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAIT 520
Query: 1082 ILARAGRIEE 1111
ILA AGR+EE
Sbjct: 521 ILAGAGRLEE 530
Score = 107 bits (268), Expect = 7e-21
Identities = 76/314 (24%), Positives = 152/314 (48%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P+V +YN ++R A+ +G A LF M+++ + + TY+T+I +GK + A +
Sbjct: 374 PNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNL 433
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+Q+M++ + + + YS +I + K +A +F +L+SSG+ D V Y +MI + K
Sbjct: 434 VQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAILFQKLRSSGVEIDQVLYQTMIVAYEK 493
Query: 371 AKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTT 550
A L A LL E++ +PD + T + + + +A VF + ++ D++
Sbjct: 494 AGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRLEEATWVFRQASDAGEIKDISV 549
Query: 551 CNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 730
+ MI+++ +F MR +G P +L YG+ F +A +++ MQ
Sbjct: 550 FSCMIELFSKNKKYANLTEVFDKMRGVGYFPDSNVIALVLNAYGKLRDFEKADAVYKEMQ 609
Query: 731 RKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLD 910
+ + + MI LYG + + L + +++ N + + I+ +A KL+
Sbjct: 610 EEGCVFSDEVHFQMISLYGARKDFKMVEELFERLES-DPNINKELHLVVAGIYERANKLN 668
Query: 911 RAATLFQKLRSSGV 952
A+ + ++ G+
Sbjct: 669 DASRIMNRMNDRGI 682
Score = 73.9 bits (180), Expect = 1e-10
Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN LR A+ + A LF M+++ + + TY+T+I +G
Sbjct: 153 LDWINEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTYSTLITYFG 212
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K + A + +Q+M+ + + + YS +I + K +A ++F +L+ SG+ D V
Sbjct: 213 KEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKWSGITPDLV 272
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELKR----PDNIPRETAITI 1084
Y +MI + +A L A+ L++E++ PD + T +T+
Sbjct: 273 AYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTM 315
>ref|XP_007215021.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
gi|462411171|gb|EMJ16220.1| hypothetical protein
PRUPE_ppa003340mg [Prunus persica]
Length = 584
Score = 662 bits (1709), Expect = 0.0
Identities = 334/370 (90%), Positives = 351/370 (94%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LYTPSVFAYNVVIRNVLRAKQW +AHGLF+EMR+RALAPDRYTYSTLIT FGK GMFD+A
Sbjct: 59 LYTPSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFGKAGMFDSA 118
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLK GI+PDLVAYNSMINV
Sbjct: 119 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLVAYNSMINV 178
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA LLL+EMR+ GV PDTVSYSTLL+MY+ENQ+F++ALSVF EMNEV CPLD
Sbjct: 179 FGKAKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEVKCPLD 238
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
LTTCNIMIDVYG LDM KEADRLFWSMRKMG+EP+VVSYNTLLRVYG+AELFGEAIHLFR
Sbjct: 239 LTTCNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFR 298
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
LMQR DIEQNVVTYNTMIK+YGKSLEHEKATNLVQEMQN GIQPNA+TYSTIISIW KAG
Sbjct: 299 LMQRMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAG 358
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDRAA LFQKLRSSGVEIDQVLYQTMIVAYER GLVAHAKRLL ELKRPDNIPRETAIT
Sbjct: 359 KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRETAIT 418
Query: 1082 ILARAGRIEE 1111
ILA AGRIEE
Sbjct: 419 ILAGAGRIEE 428
Score = 105 bits (263), Expect = 3e-20
Identities = 73/324 (22%), Positives = 153/324 (47%), Gaps = 1/324 (0%)
Frame = +2
Query: 74 AHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWLQKMEQDHVSGDLVLYSNLIE 253
A LF MRK L P+ +Y+TL+ +G +F A+ + M++ + ++V Y+ +I+
Sbjct: 258 ADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRMDIEQNVVTYNTMIK 317
Query: 254 LSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQP 433
+ K ++ KA ++ +++SGI P+ + Y+++I+++GKA A +L +++RS+GV+
Sbjct: 318 IYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 377
Query: 434 DTVSYSTLLNMYVENQQFIKALSVFFEMNEV-NCPLDLTTCNIMIDVYGLLDMVKEADRL 610
D V Y T++ Y A + E+ N P + I + ++EA +
Sbjct: 378 DQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRETA-----ITILAGAGRIEEATWV 432
Query: 611 FWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGK 790
F G + + ++ ++ + I +F M+ + ++ +GK
Sbjct: 433 FRQAFDAGEVKDISVFGCMIDLFSRNRKYANCIEVFEKMRVAGYFPASNVIDLVLNAFGK 492
Query: 791 SLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQVL 970
E EKA L +EMQ G + + +++++ LF++L + L
Sbjct: 493 LREFEKADALYREMQEEGCVFSDEVHFQMLTLYGARKDFKMVEALFKRLMCDPNINKKEL 552
Query: 971 YQTMIVAYERAGLVAHAKRLLSEL 1042
+ + YER+ + A R+++++
Sbjct: 553 HLVVASIYERSNRLNDASRIMNKM 576
Score = 100 bits (250), Expect = 8e-19
Identities = 74/314 (23%), Positives = 146/314 (46%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P+V +YN ++R A+ +G A LF M++ + + TY+T+I +GK + A +
Sbjct: 272 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRMDIEQNVVTYNTMIKIYGKSLEHEKATNL 331
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+Q+M+ + + + YS +I + K +A +F +L+SSG+ D V Y +MI + +
Sbjct: 332 VQEMQNSGIQPNAMTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 391
Query: 371 AKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTT 550
L A LL E++ +PD + T + + + +A VF + + D++
Sbjct: 392 VGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDISV 447
Query: 551 CNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 730
MID++ +F MR G P+ + +L +G+ F +A L+R MQ
Sbjct: 448 FGCMIDLFSRNRKYANCIEVFEKMRVAGYFPASNVIDLVLNAFGKLREFEKADALYREMQ 507
Query: 731 RKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLD 910
+ + + M+ LYG + + L + + + + SI+ ++ +L+
Sbjct: 508 EEGCVFSDEVHFQMLTLYGARKDFKMVEALFKRLMCDPNINKKELHLVVASIYERSNRLN 567
Query: 911 RAATLFQKLRSSGV 952
A+ + K+ G+
Sbjct: 568 DASRIMNKMNERGI 581
Score = 71.6 bits (174), Expect = 5e-10
Identities = 44/163 (26%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN ++R A+ + A LF M+++ + + TY+T+I +G
Sbjct: 51 LDWINEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFG 110
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K+ + A + +Q+M+ + + + YS +I + K +A ++F +L+ G+ D V
Sbjct: 111 KAGMFDSALSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLV 170
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELKR----PDNIPRETAITI 1084
Y +MI + +A L A+ LL E++ PD + T +++
Sbjct: 171 AYNSMINVFGKAKLFREARLLLKEMRAVGVLPDTVSYSTLLSM 213
>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product
[Vitis vinifera]
Length = 675
Score = 662 bits (1707), Expect = 0.0
Identities = 334/369 (90%), Positives = 350/369 (94%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
Y+PSVFAYNVVIRNVLRAKQW +AHGLF+EMR+RALAPDRYTYSTLIT FGKEGMFD+AL
Sbjct: 151 YSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSAL 210
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQKMEQD VSGDLVLYSNLIELSRKLCDYSKAISIFSRLK SGI PDLVAYNSMINVF
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVF 270
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLFREA LLL EMR+ GV PDTVSYSTLL+MYVEN ++++ALSVF EMNEV CPLDL
Sbjct: 271 GKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDL 330
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCN+MIDVYG LDM KEADRLFWSMRKMGIEP +VSYNTLLRVYGEAELFGEAIHLFRL
Sbjct: 331 TTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRL 390
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRKDIEQNVVTYNTMIK+YGKSLEHEKATNLVQEMQNRGI+PNAITYSTIISIW KAGK
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGK 450
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAA LFQKLRSSG+EIDQVLYQTMIVAYERAGLVAHAKRLL ELKRPDNIPRETAITI
Sbjct: 451 LDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITI 510
Query: 1085 LARAGRIEE 1111
LA AGRIEE
Sbjct: 511 LAGAGRIEE 519
Score = 110 bits (276), Expect = 8e-22
Identities = 93/416 (22%), Positives = 180/416 (43%), Gaps = 70/416 (16%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
+P + AYN +I +AK + A L EMR + PD +YSTL++ + + G + ALS
Sbjct: 257 SPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALS 316
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+M + DL + +I++ +L +A +F ++ GI P +V+YN+++ V+G
Sbjct: 317 VFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYG 376
Query: 368 KAKLFREA-HL----------------------------------LLEEMRSAGVQPDTV 442
+A+LF EA HL L++EM++ G++P+ +
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAI 436
Query: 443 SYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSM 622
+YST+++++ + + +A +F ++ +D MI Y +V A RL +
Sbjct: 437 TYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHEL 496
Query: 623 RKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLY------ 784
++ P + T + + A EA +FR +++ + MI L+
Sbjct: 497 KR----PDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSRNRKH 552
Query: 785 -----------------------------GKSLEHEKATNLVQEMQNRGIQPNAITYSTI 877
GK E EKA + +EM+ G + + +
Sbjct: 553 TNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEEEGCVFSDEVHFQM 612
Query: 878 ISIWCKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELK 1045
+S++ G +LF++L S + L+ + YERA + A ++++ ++
Sbjct: 613 LSLYGARGDFQMVDSLFERLDSDPNINKKELHLVVASIYERANRLNDASQIMNRMR 668
>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Solanum lycopersicum]
Length = 665
Score = 652 bits (1683), Expect = 0.0
Identities = 328/370 (88%), Positives = 349/370 (94%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LYTPSVFAYNV +RNVLRAKQW +A+GLFDEMR+RAL+PDRYTYSTLIT FGKEG+FD A
Sbjct: 142 LYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDA 201
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
LSWLQKMEQDHVSGDLVLY NLIELSRKLCDY+KAISIFSRLK+SGI PDLVAYN+MINV
Sbjct: 202 LSWLQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGITPDLVAYNTMINV 261
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA LL++EMRS GV PDTVSYSTLL MYVENQ+F++ALSVF EMNEV CPLD
Sbjct: 262 FGKAKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCPLD 321
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
LTTCNIMIDVYG LDM KEADRLFWSMRKMGIEP+VVSYNTLLRVYGEAELFGEAIHLFR
Sbjct: 322 LTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFR 381
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
LMQRK+IEQNVVTYNTMIK+YGK+LEHEKA NL+QEMQN GI+PNAITYSTIISIW K G
Sbjct: 382 LMQRKNIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVG 441
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDRAA LFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLL ELKRPDNIPRETAIT
Sbjct: 442 KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIT 501
Query: 1082 ILARAGRIEE 1111
ILA +GRIEE
Sbjct: 502 ILAGSGRIEE 511
Score = 112 bits (279), Expect = 4e-22
Identities = 91/411 (22%), Positives = 174/411 (42%), Gaps = 66/411 (16%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
TP + AYN +I +AK + A L EMR + PD +YSTL+T + + F ALS
Sbjct: 249 TPDLVAYNTMINVFGKAKLFREAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALS 308
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+M + DL + +I++ +L +A +F ++ GI P++V+YN+++ V+G
Sbjct: 309 VFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYG 368
Query: 368 KAKLFREA-HL----------------------------------LLEEMRSAGVQPDTV 442
+A+LF EA HL L++EM++ G++P+ +
Sbjct: 369 EAELFGEAIHLFRLMQRKNIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAI 428
Query: 443 SYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSM 622
+YST+++++ + + +A +F ++ +D MI Y +V A RL +
Sbjct: 429 TYSTIISIWAKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHEL 488
Query: 623 RKMGIEP-------------------------------SVVSYNTLLRVYGEAELFGEAI 709
++ P + + ++ +Y + I
Sbjct: 489 KRPDNIPRETAITILAGSGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYTNLI 548
Query: 710 HLFRLMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIW 889
+F M N ++ YGK E EKA + +EM G + + ++S++
Sbjct: 549 EVFEKMSGAGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQMLSLY 608
Query: 890 CKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSEL 1042
+ TL++ L S + L+ + YE+A + A R+++ +
Sbjct: 609 GARRNYEMVETLYKVLDSDPNVNKKELHLVVAAIYEKANRMNDASRIINRM 659
Score = 92.0 bits (227), Expect = 4e-16
Identities = 67/309 (21%), Positives = 137/309 (44%), Gaps = 31/309 (10%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P+V +YN ++R A+ +G A LF M+++ + + TY+T+I +GK + A +
Sbjct: 355 PNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKNIEQNVVTYNTMIKIYGKTLEHEKANNL 414
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+Q+M+ + + + YS +I + K+ +A +F +L+SSG+ D V Y +MI + +
Sbjct: 415 IQEMQNIGIEPNAITYSTIISIWAKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 474
Query: 371 AKLFREAHLLLEEMR-------------------------------SAGVQPDTVSYSTL 457
A L A LL E++ AG D + +
Sbjct: 475 AGLVAHAKRLLHELKRPDNIPRETAITILAGSGRIEEATWVFRQAFDAGELKDIAVFECM 534
Query: 458 LNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGI 637
+ +Y N+++ + VF +M+ + ++++ YG L ++AD ++ M + G
Sbjct: 535 IELYSRNRKYTNLIEVFEKMSGAGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHEEGC 594
Query: 638 EPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGKSLEHEKATN 817
S + +L +YG + L++++ + + +Y K+ A+
Sbjct: 595 VFSDEVHFQMLSLYGARRNYEMVETLYKVLDSDPNVNKKELHLVVAAIYEKANRMNDASR 654
Query: 818 LVQEMQNRG 844
++ M RG
Sbjct: 655 IINRMTYRG 663
>ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutrema salsugineum]
gi|557106704|gb|ESQ47019.1| hypothetical protein
EUTSA_v10028245mg [Eutrema salsugineum]
Length = 683
Score = 650 bits (1676), Expect = 0.0
Identities = 324/369 (87%), Positives = 352/369 (95%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
YTPSVFAYNVV+RNVLRAKQ+ +AHGLFDEMR+RALAPDRYTYSTLIT FGKEGMFD+AL
Sbjct: 156 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 215
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQKMEQD VSGDLVLYSNLIELSR+LCDYSKAISIFSRLK SGI PDLVAYNSMINV+
Sbjct: 216 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLVAYNSMINVY 275
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLFREA LL++EM+ AGV+P+TVSYSTLL++YVENQ+F++ALSVF EM EVNCPLDL
Sbjct: 276 GKAKLFREARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDL 335
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCN+MIDVYG LDMVKEADRLFWSMRKM IEP+VVSYNT+LRVYGEA+L GEAIHLFRL
Sbjct: 336 TTCNVMIDVYGQLDMVKEADRLFWSMRKMDIEPNVVSYNTILRVYGEADLIGEAIHLFRL 395
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRKDIEQNVVTYNTMIK+YGK+LEHEKATNLVQEMQ+RGI+PNAITYSTIISIW KAGK
Sbjct: 396 MQRKDIEQNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 455
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAATLFQKLR SGVEIDQVLYQTMIVAYER GL+ HAKRLL ELK+PDNIPRETAITI
Sbjct: 456 LDRAATLFQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRLLQELKQPDNIPRETAITI 515
Query: 1085 LARAGRIEE 1111
LA+AGRIEE
Sbjct: 516 LAKAGRIEE 524
Score = 118 bits (296), Expect = 4e-24
Identities = 96/413 (23%), Positives = 181/413 (43%), Gaps = 67/413 (16%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
TP + AYN +I +AK + A L EM++ + P+ +YSTL++ + + F ALS
Sbjct: 262 TPDLVAYNSMINVYGKAKLFREARLLIKEMKEAGVEPNTVSYSTLLSVYVENQKFLEALS 321
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+M++ + DL + +I++ +L +A +F ++ I P++V+YN+++ V+G
Sbjct: 322 VFAEMKEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMDIEPNVVSYNTILRVYG 381
Query: 368 KAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLT 547
+A L EA L M+ ++ + V+Y+T++ MY + + KA ++ EM +
Sbjct: 382 EADLIGEAIHLFRLMQRKDIEQNVVTYNTMIKMYGKTLEHEKATNLVQEMQSRGIEPNAI 441
Query: 548 TCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFG--------- 700
T + +I ++G + A LF +R+ G+E V Y T++ Y L G
Sbjct: 442 TYSTIISIWGKAGKLDRAATLFQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRLLQEL 501
Query: 701 ----------------------EAIHLFRLMQRKDIEQNVVTYNTMIKLY---------- 784
EA +FR +++ + MI LY
Sbjct: 502 KQPDNIPRETAITILAKAGRIEEATWVFRQAFESGEVKDITVFGCMISLYSRNQRYVNVI 561
Query: 785 -------------------------GKSLEHEKATNLVQEMQNRG-IQPNAITYSTIISI 886
GK E EKA + +EMQ G + P+ + + ++S+
Sbjct: 562 EVFEKMRSAGYFPDSNAIAIVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSL 620
Query: 887 WCKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELK 1045
+ + +LF++L S + L+ + YERA + A R+++ ++
Sbjct: 621 YSSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADRLNDASRVMNRMR 673
Score = 77.4 bits (189), Expect = 1e-11
Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN +LR A+ F A LF M+++ + + TY+T+I +G
Sbjct: 147 LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 206
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K + A + +Q+M+ + + + YS +I + + +A ++F +L+ SG+ D V
Sbjct: 207 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLV 266
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELK----RPDNIPRETAITI 1084
Y +MI Y +A L A+ L+ E+K P+ + T +++
Sbjct: 267 AYNSMINVYGKAKLFREARLLIKEMKEAGVEPNTVSYSTLLSV 309
Score = 66.2 bits (160), Expect = 2e-08
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P+ Y+ +I +A + A LF ++R+ + D+ Y T+I + + G+ A
Sbjct: 438 PNAITYSTIISIWGKAGKLDRAATLFQKLRRSGVEIDQVLYQTMIVAYERVGLMGHAKRL 497
Query: 191 LQKMEQ-DHV---------------------------SG---DLVLYSNLIELSRKLCDY 277
LQ+++Q D++ SG D+ ++ +I L + Y
Sbjct: 498 LQELKQPDNIPRETAITILAKAGRIEEATWVFRQAFESGEVKDITVFGCMISLYSRNQRY 557
Query: 278 SKAISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAG-VQPDTVSYST 454
I +F +++S+G PD A ++N +GK + F +A + EM+ G V PD V +
Sbjct: 558 VNVIEVFEKMRSAGYFPDSNAIAIVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ- 616
Query: 455 LLNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMI-DVYGLLDMVKEADRLFWSMRKM 631
+L++Y + F + + FE E + ++ ++++ +Y D + +A R+ MR+
Sbjct: 617 MLSLYSSKKDF-EMVESLFERLESDPNVNSKELHLVVAALYERADRLNDASRVMNRMRER 675
Query: 632 GI 637
GI
Sbjct: 676 GI 677
>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
gi|557533112|gb|ESR44295.1| hypothetical protein
CICLE_v10011224mg [Citrus clementina]
Length = 677
Score = 649 bits (1674), Expect = 0.0
Identities = 324/369 (87%), Positives = 351/369 (95%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
Y+PSVFAYNVV+RNVLRAKQW +AHGLFDEMR+R +APDRYTYSTLIT FGKEGMFD+A+
Sbjct: 150 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 209
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQ+MEQD VSGDLVLYSNLIEL+RKL DYSKAISIFSRLKSSGI+PDLVAYN+MINVF
Sbjct: 210 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 269
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLF+EA LL+EEMR GV+PDTVSYSTLLN+YVEN +F++ALSVF EMNEVNCPLDL
Sbjct: 270 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 329
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCNIMIDVYG LDM K+ADRLFWSMRKMGI+PSVVSYNTLLRVYGEAELFGEAIHLFRL
Sbjct: 330 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 389
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRK+IEQNVVTYNTMIK+YGKSLEHEKATNL+QEMQNRGI+PNAITYSTII+IW KAGK
Sbjct: 390 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 449
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAA LFQKLRSSGVEID VLYQTMIVAYER GLVAHAKRLL EL++PD IPRETAITI
Sbjct: 450 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITI 509
Query: 1085 LARAGRIEE 1111
LARAGRIEE
Sbjct: 510 LARAGRIEE 518
Score = 114 bits (286), Expect = 6e-23
Identities = 96/416 (23%), Positives = 180/416 (43%), Gaps = 70/416 (16%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P + AYN +I +AK + A L +EMR++ + PD +YSTL+ + + F ALS
Sbjct: 257 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 316
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+M + + DL + +I++ +L A +F ++ GI P +V+YN+++ V+G+
Sbjct: 317 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 376
Query: 371 AKLFREA-HL----------------------------------LLEEMRSAGVQPDTVS 445
A+LF EA HL L++EM++ G++P+ ++
Sbjct: 377 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 436
Query: 446 YSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMR 625
YST++ ++ + + +A +F ++ +D MI Y + +V A RL +R
Sbjct: 437 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 496
Query: 626 KMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKL-------- 781
+P + T + + A EA +FR +++ + MI+L
Sbjct: 497 ----QPDTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 552
Query: 782 ---------------------------YGKSLEHEKATNLVQEMQNRGIQPNAITYSTII 880
YGK E E A +L EMQ G + + ++
Sbjct: 553 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 612
Query: 881 SIWCKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKR 1048
S++ + +LF++L S + L+ + YERA + A R+++ + +
Sbjct: 613 SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 668
Score = 77.8 bits (190), Expect = 8e-12
Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 31/272 (11%)
Frame = +2
Query: 14 SVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWL 193
+V YN +I+ ++ + A L EM+ R + P+ TYST+I +GK G D A
Sbjct: 398 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 457
Query: 194 QKMEQDHVSGDLVLYSNLIELSRK--LCDYSK---------------------------- 283
QK+ V D VLY +I + L ++K
Sbjct: 458 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITILARAGRIE 517
Query: 284 -AISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLL 460
A +F + +G + D+ + MI +F + K + + E+MRSAG PD+ + +L
Sbjct: 518 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 577
Query: 461 NMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIE 640
N Y + ++F A ++ EM E C M+ +YG + LF +
Sbjct: 578 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 637
Query: 641 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 736
++ + +Y A +A + M ++
Sbjct: 638 NKKELHHVVAGIYERANRLNDASRIMNRMNKR 669
>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Citrus sinensis]
Length = 677
Score = 647 bits (1669), Expect = 0.0
Identities = 323/369 (87%), Positives = 351/369 (95%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
Y+PSVFAYNVV+RNVLRAKQW +AHGLFDEMR+R +APDRYTYSTLIT FGKEGMFD+A+
Sbjct: 150 YSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFGKEGMFDSAI 209
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQ+MEQD VSGDLVLYSNLIEL+RKL DYSKAISIFSRLKSSGI+PDLVAYN+MINVF
Sbjct: 210 SWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVF 269
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLF+EA LL+EEMR GV+PDTVSYSTLLN+YVEN +F++ALSVF EMNEVNCPLDL
Sbjct: 270 GKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDL 329
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCNIMIDVYG LDM K+ADRLFWSMRKMGI+PSVVSYNTLLRVYGEAELFGEAIHLFRL
Sbjct: 330 TTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRL 389
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRK+IEQNVVTYNTMIK+YGKSLEHEKATNL+QEMQNRGI+PNAITYSTII+IW KAGK
Sbjct: 390 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGK 449
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAA LFQKLRSSGVEID VLYQTMIVAYER GLVAHAKRLL EL++P+ IPRETAITI
Sbjct: 450 LDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITI 509
Query: 1085 LARAGRIEE 1111
LARAGRIEE
Sbjct: 510 LARAGRIEE 518
Score = 115 bits (287), Expect = 4e-23
Identities = 96/416 (23%), Positives = 181/416 (43%), Gaps = 70/416 (16%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P + AYN +I +AK + A L +EMR++ + PD +YSTL+ + + F ALS
Sbjct: 257 PDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSV 316
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+M + + DL + +I++ +L A +F ++ GI P +V+YN+++ V+G+
Sbjct: 317 FAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGE 376
Query: 371 AKLFREA-HL----------------------------------LLEEMRSAGVQPDTVS 445
A+LF EA HL L++EM++ G++P+ ++
Sbjct: 377 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAIT 436
Query: 446 YSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMR 625
YST++ ++ + + +A +F ++ +D MI Y + +V A RL +R
Sbjct: 437 YSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELR 496
Query: 626 KMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKL-------- 781
+P+ + T + + A EA +FR +++ + MI+L
Sbjct: 497 ----QPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYA 552
Query: 782 ---------------------------YGKSLEHEKATNLVQEMQNRGIQPNAITYSTII 880
YGK E E A +L EMQ G + + ++
Sbjct: 553 NVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQEEGCVFSDQVHFQML 612
Query: 881 SIWCKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKR 1048
S++ + +LF++L S + L+ + YERA + A R+++ + +
Sbjct: 613 SLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLNDASRIMNRMNK 668
Score = 77.8 bits (190), Expect = 8e-12
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 31/272 (11%)
Frame = +2
Query: 14 SVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWL 193
+V YN +I+ ++ + A L EM+ R + P+ TYST+I +GK G D A
Sbjct: 398 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 457
Query: 194 QKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILP--------------- 328
QK+ V D VLY +I ++ + A + L+ +P
Sbjct: 458 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIE 517
Query: 329 ----------------DLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLL 460
D+ + MI +F + K + + E+MRSAG PD+ + +L
Sbjct: 518 EATWVFRQAFDAGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVL 577
Query: 461 NMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIE 640
N Y + ++F A ++ EM E C M+ +YG + LF +
Sbjct: 578 NSYGKLREFETADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNI 637
Query: 641 PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRK 736
++ + +Y A +A + M ++
Sbjct: 638 NKKELHHVVAGIYERANRLNDASRIMNRMNKR 669
>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Solanum tuberosum]
Length = 668
Score = 646 bits (1666), Expect = 0.0
Identities = 326/370 (88%), Positives = 346/370 (93%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LYTPSVFAYNV +RNVLRAKQW +A+GLFDEMR+RAL+PDRYTYSTLIT FGKEG+FD A
Sbjct: 145 LYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTYSTLITYFGKEGLFDDA 204
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
LSWLQKMEQDHVSGDLVLY NLIELSRKLCDY+KAISIFSRLK+SGI PDLVAYN+MINV
Sbjct: 205 LSWLQKMEQDHVSGDLVLYCNLIELSRKLCDYTKAISIFSRLKTSGITPDLVAYNTMINV 264
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA LL++EMRS GV PDTVSYSTLL MYVENQ+F++ALSVF EMNEV C LD
Sbjct: 265 FGKAKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCSLD 324
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
LTTCNIMIDVYG LDM KEADRLFWSMRKMGIEP+VVSYNTLLRVYGEAELFGEAIHLFR
Sbjct: 325 LTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFR 384
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
LMQRK IEQNVVTYNTMIK+YGK+LEHEKA NL+QEMQN GI+PNAITYSTIISIW K G
Sbjct: 385 LMQRKSIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVG 444
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDRAA LFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLL ELKRPDNIPRETAI
Sbjct: 445 KLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIM 504
Query: 1082 ILARAGRIEE 1111
ILA +GRIEE
Sbjct: 505 ILAGSGRIEE 514
Score = 113 bits (283), Expect = 1e-22
Identities = 93/411 (22%), Positives = 176/411 (42%), Gaps = 66/411 (16%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
TP + AYN +I +AK + A L EMR + PD +YSTL+T + + F ALS
Sbjct: 252 TPDLVAYNTMINVFGKAKLFREAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALS 311
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+M + S DL + +I++ +L +A +F ++ GI P++V+YN+++ V+G
Sbjct: 312 VFSEMNEVKCSLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYG 371
Query: 368 KAKLFREA-HL----------------------------------LLEEMRSAGVQPDTV 442
+A+LF EA HL L++EM++ G++P+ +
Sbjct: 372 EAELFGEAIHLFRLMQRKSIEQNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAI 431
Query: 443 SYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSM 622
+YST+++++ + + +A +F ++ +D MI Y +V A RL +
Sbjct: 432 TYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHEL 491
Query: 623 RKMGIEP-------------------------------SVVSYNTLLRVYGEAELFGEAI 709
++ P + + ++ +Y + I
Sbjct: 492 KRPDNIPRETAIMILAGSGRIEEATWVFRQAFDAGELKDIAVFECMIELYSRNRKYTNLI 551
Query: 710 HLFRLMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIW 889
+F M+ N ++ YGK E EKA + +EM G + + ++S++
Sbjct: 552 EVFEKMRGTGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHEEGCVFSDEVHFQMLSLY 611
Query: 890 CKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSEL 1042
+ TL++ L S + L+ + YE+A V A R+++ +
Sbjct: 612 GARRNYEMVETLYKMLDSDPNVNKKELHLVVAGIYEKANRVNDASRIVNRM 662
>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
gi|550320029|gb|EEF04162.2| hypothetical protein
POPTR_0017s11210g [Populus trichocarpa]
Length = 639
Score = 645 bits (1665), Expect = 0.0
Identities = 324/369 (87%), Positives = 345/369 (93%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
Y+PSVFAYNVV+RNVLRAKQW AHGLFDEMR RALAPDRYTYSTLIT FGK GMFDA+L
Sbjct: 113 YSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASL 172
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
WLQ+MEQD VSGDLVLYSNLIELSRKLCDYSKAISIF RLK SGI+PDLVAYNSMINVF
Sbjct: 173 FWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVF 232
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLFREA LL++EMR GV PDTVSYSTLL++YVEN++F++ALSVF EMNE CPLDL
Sbjct: 233 GKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDL 292
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCN+MIDVYG LDM KEADRLFWSMRKMGIEP+VVSYNTLLRVYGE ELFGEAIHLFRL
Sbjct: 293 TTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRL 352
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQ+KDIEQNVVTYNTMIK+YGKSLEHEKATNL+QEMQNRGI+PNAITYSTIISIW KAGK
Sbjct: 353 MQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGK 412
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAA LFQKLRSSGVEIDQVLYQTMIVAYER+GLVAHAKRLL ELK PD+IPRETAI I
Sbjct: 413 LDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKI 472
Query: 1085 LARAGRIEE 1111
LARAGRIEE
Sbjct: 473 LARAGRIEE 481
Score = 101 bits (252), Expect = 5e-19
Identities = 73/314 (23%), Positives = 144/314 (45%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P+V +YN ++R + +G A LF M+K+ + + TY+T+I +GK + A +
Sbjct: 325 PNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNL 384
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+Q+M+ + + + YS +I + K +A +F +L+SSG+ D V Y +MI + +
Sbjct: 385 MQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 444
Query: 371 AKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTT 550
+ L A LL E++ PD++ T + + + +A VF + + D++
Sbjct: 445 SGLVAHAKRLLHELK----HPDSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISV 500
Query: 551 CNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 730
M+D++ +F MR G P +L YG+ F +A L++ MQ
Sbjct: 501 FGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQ 560
Query: 731 RKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLD 910
++ + M+ LYG + L + + + + + SI+ + +L+
Sbjct: 561 EEECVFPDEVHFQMLSLYGARKDFMMIEALFERLDSDPNINKKELHLVVASIYERKNRLN 620
Query: 911 RAATLFQKLRSSGV 952
A+ + ++ GV
Sbjct: 621 DASRIMNRMSKGGV 634
>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
gi|482554761|gb|EOA18954.1| hypothetical protein
CARUB_v10007588mg [Capsella rubella]
Length = 679
Score = 645 bits (1663), Expect = 0.0
Identities = 323/369 (87%), Positives = 350/369 (94%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
YTPSV+AYNVV+RNVLRAKQ+ +AHGLFDEMR+RALAPDRYTYSTLIT FGKEGMFD+AL
Sbjct: 153 YTPSVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 212
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQKMEQD VSGDLVLYSNLIELSR+LCDYSKAISIFSRLK SGI PDLVAYNSMINV+
Sbjct: 213 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLVAYNSMINVY 272
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLFREA LL++EM AGV P+TVSYSTLL++YVENQ+F++ALSVF EM EVNCPLDL
Sbjct: 273 GKAKLFREARLLIKEMTEAGVLPNTVSYSTLLSVYVENQKFLEALSVFAEMKEVNCPLDL 332
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCNIMIDVYG LDMVKEADRLFWS+RKM IEP+VVSYNT+LRVYGEAELFGEAIHLFRL
Sbjct: 333 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 392
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRKDIEQNVVTYNTMIK+YGK++EHEKATNLV+EMQ+RGI+PNAITYSTIISIW KAGK
Sbjct: 393 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGK 452
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAATLFQKLRSSGVEIDQVLYQTMIVAYER GL+ HAKRLL ELK PDNIPRETAITI
Sbjct: 453 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 512
Query: 1085 LARAGRIEE 1111
LA+AGR EE
Sbjct: 513 LAKAGRTEE 521
Score = 117 bits (292), Expect = 1e-23
Identities = 77/326 (23%), Positives = 159/326 (48%), Gaps = 2/326 (0%)
Frame = +2
Query: 74 AHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWLQKMEQDHVSGDLVLYSNLIE 253
A LF +RK + P+ +Y+T++ +G+ +F A+ + M++ + ++V Y+ +I+
Sbjct: 351 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 410
Query: 254 LSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQP 433
+ K ++ KA ++ ++S GI P+ + Y+++I+++GKA A L +++RS+GV+
Sbjct: 411 IYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 470
Query: 434 DTVSYSTLLNMYVENQQFIKALSVFFEMN-EVNCPLDLTTCNIMIDVYGLLDMVKEADRL 610
D V Y T++ Y A + E+ N P + I + +EA +
Sbjct: 471 DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETA-----ITILAKAGRTEEATWV 525
Query: 611 FWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGK 790
F + G + + ++ +Y + + I +F M+ + ++ YGK
Sbjct: 526 FRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGK 585
Query: 791 SLEHEKATNLVQEMQNRG-IQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
E EKA + +EMQ G + P+ + + ++S++ + TLFQ+L S +
Sbjct: 586 QREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVETLFQRLESEPNVNSKE 644
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELK 1045
L+ + YERA + A R+++ ++
Sbjct: 645 LHLVVAALYERADKLNDASRVMNRMR 670
Score = 84.7 bits (208), Expect = 6e-14
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 34/277 (12%)
Frame = +2
Query: 14 SVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWL 193
+V YN +I+ + + A L EM+ R + P+ TYST+I+ +GK G D A +
Sbjct: 401 NVVTYNTMIKIYGKTMEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 460
Query: 194 QKMEQDHVSGDLVLYSNLIELSRK--LCDYSK---------------------------- 283
QK+ V D VLY +I + L ++K
Sbjct: 461 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTE 520
Query: 284 -AISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLL 460
A +F + SG + D+ + MIN++ + + + + E+MR+AG PD+ + + +L
Sbjct: 521 EATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVL 580
Query: 461 NMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIE 640
N Y + ++F KA +V+ EM E C M+ +Y + + LF +++ E
Sbjct: 581 NAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVETLF---QRLESE 637
Query: 641 PSVVS---YNTLLRVYGEAELFGEAIHLFRLMQRKDI 742
P+V S + + +Y A+ +A + M+ + I
Sbjct: 638 PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 674
Score = 76.6 bits (187), Expect = 2e-11
Identities = 45/160 (28%), Positives = 82/160 (51%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN +LR A+ F A LF M+++ + + TY+T+I +G
Sbjct: 144 LDWVHEEAKYTPSVYAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 203
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K + A + +Q+M+ + + + YS +I + + +A ++F +L+ SG+ D V
Sbjct: 204 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKKSGITPDLV 263
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITIL 1087
Y +MI Y +A L A+ L+ E+ +P + + L
Sbjct: 264 AYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSYSTL 303
>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316573|gb|EFH46996.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 680
Score = 644 bits (1662), Expect = 0.0
Identities = 322/369 (87%), Positives = 349/369 (94%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
YTPSVFAYNVV+RNVLRAKQ+G+AHGLFDEMR+RALAPDRYTYSTLIT FGKEGMFD+AL
Sbjct: 153 YTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 212
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQKMEQD VSGDLVLYSNLIELSR+LCDYSKAISIFSRLK SGI PDLVAYNSMINV+
Sbjct: 213 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 272
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLF+EA +L++EM AGV P+TVSYSTLL++YVEN +F++ALSVF EM EVNCPLDL
Sbjct: 273 GKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDL 332
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCNIMIDVYG LDMVKEADRLFWS+RKM IEP+VVSYNT+LRVYGEAELFGEAIHLFRL
Sbjct: 333 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 392
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRKDIEQNVVTYNTMIK+YGK++EHEKATNLVQEMQ+RGI+PNAITYSTIISIW KAGK
Sbjct: 393 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 452
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAATLFQKLRSSGVEIDQVLYQTMIVAYER GL+ HAKRLL ELK PDNIPRETAITI
Sbjct: 453 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 512
Query: 1085 LARAGRIEE 1111
LA+AG EE
Sbjct: 513 LAKAGSTEE 521
Score = 114 bits (286), Expect = 6e-23
Identities = 75/326 (23%), Positives = 159/326 (48%), Gaps = 2/326 (0%)
Frame = +2
Query: 74 AHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWLQKMEQDHVSGDLVLYSNLIE 253
A LF +RK + P+ +Y+T++ +G+ +F A+ + M++ + ++V Y+ +I+
Sbjct: 351 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 410
Query: 254 LSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQP 433
+ K ++ KA ++ ++S GI P+ + Y+++I+++GKA A L +++RS+GV+
Sbjct: 411 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 470
Query: 434 DTVSYSTLLNMYVENQQFIKALSVFFEMN-EVNCPLDLTTCNIMIDVYGLLDMVKEADRL 610
D V Y T++ Y A + E+ N P + I + +EA +
Sbjct: 471 DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETA-----ITILAKAGSTEEATWV 525
Query: 611 FWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGK 790
F + G + + ++ +Y + + I +F M+ + ++ YGK
Sbjct: 526 FRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGK 585
Query: 791 SLEHEKATNLVQEMQNRG-IQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
E EKA + +EMQ G + P+ + + ++S++ + +LF++L S +
Sbjct: 586 QREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFERLESDPNVNSKE 644
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELK 1045
L+ + YERA + A R+++ ++
Sbjct: 645 LHLVVAALYERADKLNDASRVMNRMR 670
Score = 84.7 bits (208), Expect = 6e-14
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Frame = +2
Query: 14 SVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWL 193
+V YN +I+ + + A L EM+ R + P+ TYST+I+ +GK G D A +
Sbjct: 401 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 460
Query: 194 QKMEQDHVSGDLVLYSNLI-------------------------------ELSRKLCDYS 280
QK+ V D VLY +I + K
Sbjct: 461 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTE 520
Query: 281 KAISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLL 460
+A +F + SG + D+ + MIN++ + + + + E+MR+AG PD+ + + +L
Sbjct: 521 EATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVL 580
Query: 461 NMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIE 640
N Y + ++F KA +V+ EM E C M+ +Y + + LF ++ +
Sbjct: 581 NAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF---ERLESD 637
Query: 641 PSVVS---YNTLLRVYGEAELFGEAIHLFRLMQRKDI 742
P+V S + + +Y A+ +A + M+ + I
Sbjct: 638 PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 674
Score = 77.4 bits (189), Expect = 1e-11
Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN +LR A+ FG A LF M+++ + + TY+T+I +G
Sbjct: 144 LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFG 203
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K + A + +Q+M+ + + + YS +I + + +A ++F +L+ SG+ D V
Sbjct: 204 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 263
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELKR----PDNIPRETAITI 1084
Y +MI Y +A L A+ L+ E+ P+ + T +++
Sbjct: 264 AYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSV 306
>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product
[Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 678
Score = 642 bits (1657), Expect = 0.0
Identities = 323/369 (87%), Positives = 348/369 (94%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
YTPSVFAYNVV+RNVLRAKQ+ +AHGLFDEMR+RALAPDRYTYSTLIT FGKEGMFD+AL
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQKMEQD VSGDLVLYSNLIELSR+LCDYSKAISIFSRLK SGI PDLVAYNSMINV+
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLFREA LL++EM AGV P+TVSYSTLL++YVEN +F++ALSVF EM EVNC LDL
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCNIMIDVYG LDMVKEADRLFWS+RKM IEP+VVSYNT+LRVYGEAELFGEAIHLFRL
Sbjct: 331 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 390
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRKDIEQNVVTYNTMIK+YGK++EHEKATNLVQEMQ+RGI+PNAITYSTIISIW KAGK
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAATLFQKLRSSGVEIDQVLYQTMIVAYER GL+ HAKRLL ELK PDNIPRETAITI
Sbjct: 451 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 510
Query: 1085 LARAGRIEE 1111
LA+AGR EE
Sbjct: 511 LAKAGRTEE 519
Score = 115 bits (289), Expect = 3e-23
Identities = 76/326 (23%), Positives = 159/326 (48%), Gaps = 2/326 (0%)
Frame = +2
Query: 74 AHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWLQKMEQDHVSGDLVLYSNLIE 253
A LF +RK + P+ +Y+T++ +G+ +F A+ + M++ + ++V Y+ +I+
Sbjct: 349 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 254 LSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQP 433
+ K ++ KA ++ ++S GI P+ + Y+++I+++GKA A L +++RS+GV+
Sbjct: 409 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468
Query: 434 DTVSYSTLLNMYVENQQFIKALSVFFEMN-EVNCPLDLTTCNIMIDVYGLLDMVKEADRL 610
D V Y T++ Y A + E+ N P + I + +EA +
Sbjct: 469 DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETA-----ITILAKAGRTEEATWV 523
Query: 611 FWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGK 790
F + G + + ++ +Y + + I +F M+ + ++ YGK
Sbjct: 524 FRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGK 583
Query: 791 SLEHEKATNLVQEMQNRG-IQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
E EKA + +EMQ G + P+ + + ++S++ + +LFQ+L S +
Sbjct: 584 QREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKE 642
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELK 1045
L+ + YERA + A R+++ ++
Sbjct: 643 LHLVVAALYERADKLNDASRVMNRMR 668
Score = 83.2 bits (204), Expect = 2e-13
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 34/277 (12%)
Frame = +2
Query: 14 SVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWL 193
+V YN +I+ + + A L EM+ R + P+ TYST+I+ +GK G D A +
Sbjct: 399 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 458
Query: 194 QKMEQDHVSGDLVLYSNLIELSRK--LCDYSK---------------------------- 283
QK+ V D VLY +I + L ++K
Sbjct: 459 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTE 518
Query: 284 -AISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLL 460
A +F + SG + D+ + MIN++ + + + + E+MR+AG PD+ + +L
Sbjct: 519 EATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVL 578
Query: 461 NMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIE 640
N Y + ++F KA +V+ EM E C M+ +Y + + LF +++ +
Sbjct: 579 NAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF---QRLESD 635
Query: 641 PSVVS---YNTLLRVYGEAELFGEAIHLFRLMQRKDI 742
P+V S + + +Y A+ +A + M+ + I
Sbjct: 636 PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
Score = 76.6 bits (187), Expect = 2e-11
Identities = 45/160 (28%), Positives = 82/160 (51%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN +LR A+ F A LF M+++ + + TY+T+I +G
Sbjct: 142 LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 201
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K + A + +Q+M+ + + + YS +I + + +A ++F +L+ SG+ D V
Sbjct: 202 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 261
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITIL 1087
Y +MI Y +A L A+ L+ E+ +P + + L
Sbjct: 262 AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 642 bits (1657), Expect = 0.0
Identities = 323/369 (87%), Positives = 348/369 (94%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
YTPSVFAYNVV+RNVLRAKQ+ +AHGLFDEMR+RALAPDRYTYSTLIT FGKEGMFD+AL
Sbjct: 19 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 78
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQKMEQD VSGDLVLYSNLIELSR+LCDYSKAISIFSRLK SGI PDLVAYNSMINV+
Sbjct: 79 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 138
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLFREA LL++EM AGV P+TVSYSTLL++YVEN +F++ALSVF EM EVNC LDL
Sbjct: 139 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 198
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCNIMIDVYG LDMVKEADRLFWS+RKM IEP+VVSYNT+LRVYGEAELFGEAIHLFRL
Sbjct: 199 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 258
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRKDIEQNVVTYNTMIK+YGK++EHEKATNLVQEMQ+RGI+PNAITYSTIISIW KAGK
Sbjct: 259 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 318
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAATLFQKLRSSGVEIDQVLYQTMIVAYER GL+ HAKRLL ELK PDNIPRETAITI
Sbjct: 319 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 378
Query: 1085 LARAGRIEE 1111
LA+AGR EE
Sbjct: 379 LAKAGRTEE 387
Score = 115 bits (289), Expect = 3e-23
Identities = 76/326 (23%), Positives = 159/326 (48%), Gaps = 2/326 (0%)
Frame = +2
Query: 74 AHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWLQKMEQDHVSGDLVLYSNLIE 253
A LF +RK + P+ +Y+T++ +G+ +F A+ + M++ + ++V Y+ +I+
Sbjct: 217 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 276
Query: 254 LSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQP 433
+ K ++ KA ++ ++S GI P+ + Y+++I+++GKA A L +++RS+GV+
Sbjct: 277 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 336
Query: 434 DTVSYSTLLNMYVENQQFIKALSVFFEMN-EVNCPLDLTTCNIMIDVYGLLDMVKEADRL 610
D V Y T++ Y A + E+ N P + I + +EA +
Sbjct: 337 DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETA-----ITILAKAGRTEEATWV 391
Query: 611 FWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGK 790
F + G + + ++ +Y + + I +F M+ + ++ YGK
Sbjct: 392 FRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGK 451
Query: 791 SLEHEKATNLVQEMQNRG-IQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
E EKA + +EMQ G + P+ + + ++S++ + +LFQ+L S +
Sbjct: 452 QREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKE 510
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELK 1045
L+ + YERA + A R+++ ++
Sbjct: 511 LHLVVAALYERADKLNDASRVMNRMR 536
Score = 83.2 bits (204), Expect = 2e-13
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 34/277 (12%)
Frame = +2
Query: 14 SVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWL 193
+V YN +I+ + + A L EM+ R + P+ TYST+I+ +GK G D A +
Sbjct: 267 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 326
Query: 194 QKMEQDHVSGDLVLYSNLIELSRK--LCDYSK---------------------------- 283
QK+ V D VLY +I + L ++K
Sbjct: 327 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTE 386
Query: 284 -AISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLL 460
A +F + SG + D+ + MIN++ + + + + E+MR+AG PD+ + +L
Sbjct: 387 EATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVL 446
Query: 461 NMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIE 640
N Y + ++F KA +V+ EM E C M+ +Y + + LF +++ +
Sbjct: 447 NAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF---QRLESD 503
Query: 641 PSVVS---YNTLLRVYGEAELFGEAIHLFRLMQRKDI 742
P+V S + + +Y A+ +A + M+ + I
Sbjct: 504 PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 540
Score = 76.6 bits (187), Expect = 2e-11
Identities = 45/160 (28%), Positives = 82/160 (51%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN +LR A+ F A LF M+++ + + TY+T+I +G
Sbjct: 10 LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 69
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K + A + +Q+M+ + + + YS +I + + +A ++F +L+ SG+ D V
Sbjct: 70 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 129
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITIL 1087
Y +MI Y +A L A+ L+ E+ +P + + L
Sbjct: 130 AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 169
>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 641 bits (1653), Expect = 0.0
Identities = 321/370 (86%), Positives = 347/370 (93%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LYTPSV+AYNVV+RNVLRAKQW +AHGLFDEMR+RALA DRYTYSTLIT FGKEGMFDAA
Sbjct: 154 LYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAA 213
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
LSWLQKMEQD VSGDLVLYSNLIELSRKLCDYSKAISIFSRLK SGI PD+VAYN+MINV
Sbjct: 214 LSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINV 273
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA LL+EMR+ V PDTVSYSTLLNM+VEN++F++ALSV EM EVNCPLD
Sbjct: 274 FGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLD 333
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
LTTCNIMIDVYG LDMVKEADRLFW MRK+GIEP+VVSYNT+LRVYGEAELFGEAIHLFR
Sbjct: 334 LTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFR 393
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
LMQRK+I+QNVVTYNTMIK+YGK+LEHEKATNLVQ+MQ RGI+PNAITYSTIISIW KAG
Sbjct: 394 LMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAG 453
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDR+A LFQKLRSSG EIDQVLYQTMIVAYE+AGLV HAKRLL ELK+PDNIPR TAIT
Sbjct: 454 KLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAIT 513
Query: 1082 ILARAGRIEE 1111
ILA+AGRIEE
Sbjct: 514 ILAKAGRIEE 523
Score = 137 bits (345), Expect = 8e-30
Identities = 98/383 (25%), Positives = 186/383 (48%), Gaps = 31/383 (8%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
TP + AYN +I +AK + A L EMR + PD +YSTL+ F + F ALS
Sbjct: 261 TPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALS 320
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+ +M++ + DL + +I++ +L +A +F R++ GI P++V+YN+++ V+G
Sbjct: 321 VISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYG 380
Query: 368 KAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLT 547
+A+LF EA L M+ ++ + V+Y+T++ +Y + + KA ++ +M + +
Sbjct: 381 EAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAI 440
Query: 548 TCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLM 727
T + +I ++G + + LF +R G E V Y T++ Y +A L G A L +
Sbjct: 441 TYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHEL 500
Query: 728 QRKD----------------IEQ---------------NVVTYNTMIKLYGKSLEHEKAT 814
++ D IE+ ++ + MI L+ ++ +H+
Sbjct: 501 KQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVL 560
Query: 815 NLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 994
+ ++M+N G PN+ + +++ + K D A L+ +++ G ++ M+ Y
Sbjct: 561 EVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSLY 620
Query: 995 ERAGLVAHAKRLLSELKRPDNIP 1063
G KRL S +R D+ P
Sbjct: 621 ---GARNDYKRLESLFERLDSDP 640
Score = 84.0 bits (206), Expect = 1e-13
Identities = 70/313 (22%), Positives = 136/313 (43%), Gaps = 34/313 (10%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P+V +YN ++R A+ +G A LF M+++ + + TY+T+I +GK + A +
Sbjct: 367 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNL 426
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+Q M++ + + + YS +I + K ++ +F +L+SSG D V Y +MI + K
Sbjct: 427 VQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEK 486
Query: 371 AKLFREAHLLLEEMRS-------------------------------AGVQPDTVSYSTL 457
A L A LL E++ AG D + +
Sbjct: 487 AGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECM 546
Query: 458 LNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGI 637
++++ N++ L VF +M V + ++++ YG L AD L+ M++ G
Sbjct: 547 IDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGC 606
Query: 638 EPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNV---VTYNTMIKLYGKSLEHEK 808
+ + +L +YG + LF +R D + N+ + + +Y + +
Sbjct: 607 VFTDEVHFQMLSLYGARNDYKRLESLF---ERLDSDPNINKKELHLVVASIYERGNRSKD 663
Query: 809 ATNLVQEMQNRGI 847
A+ ++ M I
Sbjct: 664 ASRIINRMNKIAI 676
Score = 76.3 bits (186), Expect = 2e-11
Identities = 47/160 (29%), Positives = 84/160 (52%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN +LR A+ + A LF M+++ + + TY+T+I +G
Sbjct: 146 LDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFG 205
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K + A + +Q+M+ + + + YS +I + K +A ++F +L+ SG+ D V
Sbjct: 206 KEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIV 265
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITIL 1087
Y TMI + +A L A+ LL E++ D +P + + L
Sbjct: 266 AYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTL 305
>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 672
Score = 635 bits (1639), Expect = e-180
Identities = 319/370 (86%), Positives = 344/370 (92%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LYTPSVFAYNVV+RNVLRA QW +AHGLFDEMR RALAPDRYTYSTLIT FGK GMFDAA
Sbjct: 147 LYTPSVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTYSTLITAFGKAGMFDAA 206
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
LSWLQKMEQD VSGDLVLYSNLIELSRKLCDY+KAI+IFSRLK GI+PDLVA+NSMINV
Sbjct: 207 LSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYTKAIAIFSRLKRMGIVPDLVAFNSMINV 266
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA LL+EMR+ GV PDTVSYSTLL MYVEN++F++AL VF EM+EV C LD
Sbjct: 267 FGKAKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGVFREMSEVKCGLD 326
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
+TTCN+MIDVYG LDM KEADRLFWSMRKM IEP+VVSYNTLLRVYG+AELFGEAIHLFR
Sbjct: 327 ITTCNVMIDVYGQLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEAIHLFR 386
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
+MQR D+EQNVVTYNTMI++YGKSLEHEKATNLVQEMQ RGIQPNAITYSTIISIW +AG
Sbjct: 387 MMQRMDVEQNVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAG 446
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDRAA LFQKLR+SGVEIDQVLYQTMIV+YER GLVAHAKRLL ELKRPDNIPRETAIT
Sbjct: 447 KLDRAAMLFQKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELKRPDNIPRETAIT 506
Query: 1082 ILARAGRIEE 1111
ILARAGR+EE
Sbjct: 507 ILARAGRVEE 516
Score = 122 bits (305), Expect = 4e-25
Identities = 83/359 (23%), Positives = 170/359 (47%), Gaps = 31/359 (8%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P + A+N +I +AK + A GL EMR +APD +YSTL+T + + F AL
Sbjct: 255 PDLVAFNSMINVFGKAKLFREARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGV 314
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
++M + D+ + +I++ +L +A +F ++ I P++V+YN+++ V+G
Sbjct: 315 FREMSEVKCGLDITTCNVMIDVYGQLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGD 374
Query: 371 AKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTT 550
A+LF EA L M+ V+ + V+Y+T++ +Y ++ + KA ++ EM + + T
Sbjct: 375 AELFGEAIHLFRMMQRMDVEQNVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAIT 434
Query: 551 CNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 730
+ +I ++G + A LF +R G+E V Y T++ Y L A L ++
Sbjct: 435 YSTIISIWGRAGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELK 494
Query: 731 RKD----------------IEQ---------------NVVTYNTMIKLYGKSLEHEKATN 817
R D +E+ ++ + MI+LY ++ ++
Sbjct: 495 RPDNIPRETAITILARAGRVEEATWVFRQAFEAGQVKDISVFGCMIELYSRNRKYANCIE 554
Query: 818 LVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 994
+ + M+ G P + +++ + K + ++A ++++++ G ++ M+ Y
Sbjct: 555 VFENMRVAGYFPASHVIGLVLNAYGKLREFEKADAVYREMQEEGCVFSDEIHFQMLSLY 613
Score = 94.0 bits (232), Expect = 1e-16
Identities = 66/259 (25%), Positives = 125/259 (48%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P+V +YN ++R A+ +G A LF M++ + + TY+T+I +GK + A +
Sbjct: 360 PNVVSYNTLLRVYGDAELFGEAIHLFRMMQRMDVEQNVVTYNTMIRIYGKSLEHEKATNL 419
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+Q+M++ + + + YS +I + + +A +F +L++SG+ D V Y +MI + +
Sbjct: 420 VQEMQKRGIQPNAITYSTIISIWGRAGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVSYER 479
Query: 371 AKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTT 550
L A LL E++ +PD + T + + + +A VF + E D++
Sbjct: 480 VGLVAHAKRLLHELK----RPDNIPRETAITILARAGRVEEATWVFRQAFEAGQVKDISV 535
Query: 551 CNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 730
MI++Y +F +MR G P+ +L YG+ F +A ++R MQ
Sbjct: 536 FGCMIELYSRNRKYANCIEVFENMRVAGYFPASHVIGLVLNAYGKLREFEKADAVYREMQ 595
Query: 731 RKDIEQNVVTYNTMIKLYG 787
+ + + M+ LYG
Sbjct: 596 EEGCVFSDEIHFQMLSLYG 614
>ref|XP_007032420.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508711449|gb|EOY03346.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 672
Score = 634 bits (1635), Expect = e-179
Identities = 316/369 (85%), Positives = 344/369 (93%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
Y+PS+FAYNVVIRNV++AKQW +AHGLF+EMR++ L PDR+TYSTLIT FGKEGMFD+AL
Sbjct: 148 YSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTLITYFGKEGMFDSAL 207
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
SWLQKME D VSGDLVL+SNLIELSRKL DYSKAISIF++LK SGI+PDLV YNSMINVF
Sbjct: 208 SWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGIVPDLVCYNSMINVF 267
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKAKLFREA LL++EMR GV PDTVSYST+LNMYVEN +F++ALSVF EMNEV CPLDL
Sbjct: 268 GKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEMNEVKCPLDL 327
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TTCNIMIDVYG LDM KEADRLFW MRKMGIEP+VVSYNTLL+VYGEAEL+GEAIHLFRL
Sbjct: 328 TTCNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRL 387
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
M RKDIEQNVVTYNTMIK+YGKSLEHEKA NLVQEMQNRGI+PNAITYSTIISIW KAGK
Sbjct: 388 MHRKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGK 447
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAA LFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLL ELK+PDN+PR+TAI I
Sbjct: 448 LDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTAIMI 507
Query: 1085 LARAGRIEE 1111
LARAGRIEE
Sbjct: 508 LARAGRIEE 516
Score = 104 bits (259), Expect = 8e-20
Identities = 73/325 (22%), Positives = 155/325 (47%), Gaps = 2/325 (0%)
Frame = +2
Query: 74 AHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWLQKMEQDHVSGDLVLYSNLIE 253
A LF MRK + P+ +Y+TL+ +G+ ++ A+ + M + + ++V Y+ +I+
Sbjct: 346 ADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMHRKDIEQNVVTYNTMIK 405
Query: 254 LSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQP 433
+ K ++ KA ++ +++ GI P+ + Y+++I+++GKA A +L +++RS+GV+
Sbjct: 406 IYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 465
Query: 434 DTVSYSTLLNMYVENQQFIKALSVFFEMNEV-NCPLDLTTCNIMIDVYGLLDMVKEADRL 610
D V Y T++ Y A + E+ + N P D I + ++EA +
Sbjct: 466 DQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTA-----IMILARAGRIEEATWV 520
Query: 611 FWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGK 790
F G + + ++ ++ + I +F M+ + ++ YGK
Sbjct: 521 FRQACDAGEVKDISVFGLMIDLFSRNKKHANVIEVFEKMRSAGYFPDSNVIALVLNAYGK 580
Query: 791 SLEHEKATNLVQEMQNRG-IQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
E +KA + +EMQ G + P+ + + ++S+ +LF+KL S +
Sbjct: 581 LREFDKADAVYKEMQEEGCVFPDEVHFQ-MLSLCGARKDFKMVESLFEKLDSDPNINKKE 639
Query: 968 LYQTMIVAYERAGLVAHAKRLLSEL 1042
L+ + YER + A ++++ +
Sbjct: 640 LHLVVASIYERGNRLNDASQIMNRM 664
Score = 80.5 bits (197), Expect = 1e-12
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 34/277 (12%)
Frame = +2
Query: 14 SVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSWL 193
+V YN +I+ ++ + A+ L EM+ R + P+ TYST+I+ +GK G D A
Sbjct: 396 NVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLF 455
Query: 194 QKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILP--------------- 328
QK+ V D VLY +I + + A + LK LP
Sbjct: 456 QKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTAIMILARAGRIE 515
Query: 329 ----------------DLVAYNSMINVFGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLL 460
D+ + MI++F + K + E+MRSAG PD+ + +L
Sbjct: 516 EATWVFRQACDAGEVKDISVFGLMIDLFSRNKKHANVIEVFEKMRSAGYFPDSNVIALVL 575
Query: 461 NMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIE 640
N Y + ++F KA +V+ EM E C M+ + G K + LF K+ +
Sbjct: 576 NAYGKLREFDKADAVYKEMQEEGCVFPDEVHFQMLSLCGARKDFKMVESLF---EKLDSD 632
Query: 641 PSVVS---YNTLLRVYGEAELFGEAIHLFRLMQRKDI 742
P++ + + +Y +A + M + I
Sbjct: 633 PNINKKELHLVVASIYERGNRLNDASQIMNRMSERGI 669
>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 654
Score = 633 bits (1632), Expect = e-179
Identities = 319/369 (86%), Positives = 343/369 (92%)
Frame = +2
Query: 5 YTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAAL 184
Y+PSVFAYNVV+RNVLRAK+W +AHGLFDEMR+RAL+PDRYTYSTLIT FGK GMFD +L
Sbjct: 130 YSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESL 189
Query: 185 SWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVF 364
WLQ+MEQD VSGDLVLYSNLIELSRKLCDYSKAISIF RLK SGI PDLVAYNSMINVF
Sbjct: 190 FWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVF 249
Query: 365 GKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDL 544
GKA+LFREA +L+ EMR GV PDTVSYSTLL++YVEN++F++ALSVF EMNE NC LDL
Sbjct: 250 GKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDL 309
Query: 545 TTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRL 724
TCNIMIDVYG LDMVKEADRLFWSMRKMGIEP+VVSYNTLL+VYGEAELFGEAIHLFRL
Sbjct: 310 MTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRL 369
Query: 725 MQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGK 904
MQRK+IEQNVVTYNTMIK+YGKSLEHEKATNLVQEMQ RGI+PNAITYSTIISIW KAGK
Sbjct: 370 MQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGK 429
Query: 905 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAITI 1084
LDRAA LFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLL +LK PD IPR+TAI I
Sbjct: 430 LDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKI 489
Query: 1085 LARAGRIEE 1111
LARAGRIEE
Sbjct: 490 LARAGRIEE 498
Score = 114 bits (285), Expect = 7e-23
Identities = 88/413 (21%), Positives = 185/413 (44%), Gaps = 66/413 (15%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
TP + AYN +I +A+ + A L EMR+ + PD +YSTL++ + + F ALS
Sbjct: 236 TPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALS 295
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+M + + S DL+ + +I++ +L +A +F ++ GI P++V+YN+++ V+G
Sbjct: 296 VFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYG 355
Query: 368 KAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLT 547
+A+LF EA L M+ ++ + V+Y+T++ +Y ++ + KA ++ EM + +
Sbjct: 356 EAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAI 415
Query: 548 TCNIMIDVYGLLDMVKEADRLFWSMRKMGIE----------------------------- 640
T + +I ++G + A LF +R G+E
Sbjct: 416 TYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDL 475
Query: 641 --PSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGKSLEHEKAT 814
P ++ +T +++ A EA +FR +++ + MI+L+ ++
Sbjct: 476 KCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVV 535
Query: 815 NLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRA-------------------------- 916
+ ++M+ G P++ + +++ + K + ++A
Sbjct: 536 EVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHFQMLSLY 595
Query: 917 ---------ATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKR 1048
+LF+KL S + L+ + YER + A R+++ + +
Sbjct: 596 GARKDFIMVESLFEKLDSDPNINKKELHLVVASIYERQNRLNDASRIMNRMSK 648
Score = 99.4 bits (246), Expect = 2e-18
Identities = 71/314 (22%), Positives = 147/314 (46%)
Frame = +2
Query: 11 PSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALSW 190
P+V +YN +++ A+ +G A LF M+++ + + TY+T+I +GK + A +
Sbjct: 342 PNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNL 401
Query: 191 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFGK 370
+Q+M++ + + + YS +I + K +A +F +L+SSG+ D V Y +MI + +
Sbjct: 402 VQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYER 461
Query: 371 AKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTT 550
A L A LL +++ PD + T + + + +A VF + + D++
Sbjct: 462 AGLVAHAKRLLHDLKC----PDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISV 517
Query: 551 CNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQ 730
MI+++ +F MR G P +L YG+ F +A ++R MQ
Sbjct: 518 FRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQ 577
Query: 731 RKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLD 910
++ + M+ LYG + +L +++ + + + SI+ + +L+
Sbjct: 578 EEECVFPDEVHFQMLSLYGARKDFIMVESLFEKLDSDPNINKKELHLVVASIYERQNRLN 637
Query: 911 RAATLFQKLRSSGV 952
A+ + ++ G+
Sbjct: 638 DASRIMNRMSKEGM 651
Score = 95.1 bits (235), Expect = 5e-17
Identities = 69/291 (23%), Positives = 136/291 (46%), Gaps = 7/291 (2%)
Frame = +2
Query: 245 LIELSRKLCDYSKAISIFSRLKS-SGILPDLVAYNSMINVFGKAKLFREAHLLLEEMRSA 421
++ L + D+ +++++ + + P + AYN ++ +AK + AH L +EMR
Sbjct: 104 MVSLISQEADWQRSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQR 163
Query: 422 GVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEA 601
+ PD +YSTL+ F KA G+ D
Sbjct: 164 ALSPDRYTYSTLIT------SFGKA--------------------------GMFD----- 186
Query: 602 DRLFW--SMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 775
+ LFW M + + +V Y+ L+ + + + +AI +F ++R I ++V YN+MI
Sbjct: 187 ESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMI 246
Query: 776 KLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVE 955
++GK+ +A LV EM+ G+ P+ ++YST++S++ + K A ++F ++ +
Sbjct: 247 NVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCS 306
Query: 956 IDQVLYQTMIVAYERAGLVAHAKRLLSELKR----PDNIPRETAITILARA 1096
+D + MI Y + +V A RL +++ P+ + T + + A
Sbjct: 307 LDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEA 357
Score = 73.9 bits (180), Expect = 1e-10
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 4/219 (1%)
Frame = +2
Query: 440 VSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLTTCNIMIDVYGLLDMVKEADRLFWS 619
V +LL+ Y E Q LS+ F ++ ++ D LLD + E R
Sbjct: 85 VELYSLLSPYKERQ-----LSIRFMVSLISQEADWQRS------LALLDWINEVARY--- 130
Query: 620 MRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYGKSLE 799
PSV +YN +LR A+ + A LF M+++ + + TY+T+I +GK+
Sbjct: 131 ------SPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGM 184
Query: 800 HEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQVLYQT 979
+++ +Q+M+ + + + YS +I + K +A ++F +L+ SG+ D V Y +
Sbjct: 185 FDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNS 244
Query: 980 MIVAYERAGLVAHAKRLLSELKR----PDNIPRETAITI 1084
MI + +A L A+ L+ E++ PD + T +++
Sbjct: 245 MINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSV 283
>gb|EYU34118.1| hypothetical protein MIMGU_mgv1a003395mg [Mimulus guttatus]
Length = 588
Score = 629 bits (1621), Expect = e-178
Identities = 316/370 (85%), Positives = 339/370 (91%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LYTPSVFAYNVV+RNVLRAKQW +AHGLFDEMR+RAL+PDRYTYSTLIT FGKEG+FD A
Sbjct: 79 LYTPSVFAYNVVLRNVLRAKQWEIAHGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDDA 138
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
LSWLQKME D V GDLVLYSNLIELSRKLCDYSKAISIFSRLK SGI PDLVAYNSMINV
Sbjct: 139 LSWLQKMEHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 198
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA L+ EMR+AGV PDTVSY+TLL MYVENQ+F +ALSVF EM +VNC LD
Sbjct: 199 FGKAKLFREARSLISEMRNAGVTPDTVSYTTLLTMYVENQRFPEALSVFSEMRDVNCLLD 258
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
LTTCNIMIDVYG LDM KEAD+LFW MRK+GIEP+VVSYNTLLRVYG+AELFGEAIHLFR
Sbjct: 259 LTTCNIMIDVYGHLDMAKEADKLFWGMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFR 318
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
LMQRKDIEQNVVTYNTMI +YGK++EHEKA NL+QEM +R I+PNAITYSTIISIW K G
Sbjct: 319 LMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMHSRNIEPNAITYSTIISIWGKVG 378
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDRAA LFQKLRS+G+EIDQVLYQTMIVAYERAGLVAHAKRLL ELKRPDNIPR TAI
Sbjct: 379 KLDRAAMLFQKLRSAGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRATAIR 438
Query: 1082 ILARAGRIEE 1111
ILA AGRIEE
Sbjct: 439 ILAGAGRIEE 448
Score = 107 bits (266), Expect = 1e-20
Identities = 96/401 (23%), Positives = 165/401 (41%), Gaps = 66/401 (16%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
TP + AYN +I +AK + A L EMR + PD +Y+TL+T + + F ALS
Sbjct: 186 TPDLVAYNSMINVFGKAKLFREARSLISEMRNAGVTPDTVSYTTLLTMYVENQRFPEALS 245
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+M + DL + +I++ L +A +F ++ GI P++V+YN+++ V+G
Sbjct: 246 VFSEMRDVNCLLDLTTCNIMIDVYGHLDMAKEADKLFWGMRKLGIEPNVVSYNTLLRVYG 305
Query: 368 KAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLT 547
A+LF EA L M+ ++ + V+Y+T++ +Y + + KA ++ EM+ N +
Sbjct: 306 DAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTMEHEKANNLIQEMHSRNIEPNAI 365
Query: 548 TCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYN---------------------- 661
T + +I ++G + + A LF +R GIE V Y
Sbjct: 366 TYSTIISIWGKVGKLDRAAMLFQKLRSAGIEIDQVLYQTMIVAYERAGLVAHAKRLLHEL 425
Query: 662 ---------TLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKL----------- 781
T +R+ A EA +FR +++ + MI L
Sbjct: 426 KRPDNIPRATAIRILAGAGRIEEATWVFRQAVDAGEIKDIKVFEHMIHLFSKYRKYANVI 485
Query: 782 ------------------------YGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIW 889
YGK E EKA E+Q G + + ++S+
Sbjct: 486 EVFERMRAIGYFPDSNVIALVLNGYGKLQEFEKADCAYTELQEEGCVFSDEVHFQMLSLC 545
Query: 890 CKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLV 1012
+ LF++L + L+ + YERA V
Sbjct: 546 GARRDFETVERLFERLEMDPNVNKKDLHLVVDGIYERANRV 586
Score = 77.4 bits (189), Expect = 1e-11
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Frame = +2
Query: 608 LFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKLYG 787
L W + PSV +YN +LR A+ + A LF M+++ + + TY+T+I +G
Sbjct: 71 LDWINEEALYTPSVFAYNVVLRNVLRAKQWEIAHGLFDEMRQRALSPDRYTYSTLITHFG 130
Query: 788 KSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRAATLFQKLRSSGVEIDQV 967
K + A + +Q+M++ + + + YS +I + K +A ++F +L+ SG+ D V
Sbjct: 131 KEGLFDDALSWLQKMEHDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLV 190
Query: 968 LYQTMIVAYERAGLVAHAKRLLSELKR----PDNIPRETAITILARAGRIEE 1111
Y +MI + +A L A+ L+SE++ PD + T +T+ R E
Sbjct: 191 AYNSMINVFGKAKLFREARSLISEMRNAGVTPDTVSYTTLLTMYVENQRFPE 242
>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 621 bits (1602), Expect = e-175
Identities = 308/370 (83%), Positives = 344/370 (92%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LY+PS+FAYNV++RNVLRAKQW +AHGLFDEMR++ L+PDRYTYSTLIT FGK G+FD++
Sbjct: 130 LYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSS 189
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
L WLQ+MEQD+VSGDLVLYSNLI+L+RKL DYSKAISIFSRLK+S I PDL+AYNSMINV
Sbjct: 190 LFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINV 249
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA LLL+EMR VQPDTVSYSTLL +YV+NQ+F++ALS+FFEMNE CPLD
Sbjct: 250 FGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLD 309
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
LTTCNIMIDVYG L M KEADRLFWSMRKMGI+P+VVSYNTLLRVYGEA+LFGEAIHLFR
Sbjct: 310 LTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFR 369
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
LMQ KD++QNVVTYNTMI +YGK+LEHEKATNL+QEM+ RGI+PNAITYSTIISIW KAG
Sbjct: 370 LMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAG 429
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDRAA LFQKLRSSGV ID+VLYQTMIVAYERAGLVAHAKRLL ELKRPDNIPR+TAI
Sbjct: 430 KLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIG 489
Query: 1082 ILARAGRIEE 1111
ILARAGRIEE
Sbjct: 490 ILARAGRIEE 499
Score = 119 bits (299), Expect = 2e-24
Identities = 99/416 (23%), Positives = 184/416 (44%), Gaps = 66/416 (15%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
+P + AYN +I +AK + A L EMR A+ PD +YSTL+ + F ALS
Sbjct: 237 SPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALS 296
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+M + DL + +I++ +L +A +F ++ GI P++V+YN+++ V+G
Sbjct: 297 LFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYG 356
Query: 368 KAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLT 547
+A LF EA L M+S VQ + V+Y+T++N+Y + + KA ++ EM + +
Sbjct: 357 EADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAI 416
Query: 548 TCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLM 727
T + +I ++ + A LF +R G+ V Y T++ Y A L A L +
Sbjct: 417 TYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHEL 476
Query: 728 QRKD----------------IEQ---------------NVVTYNTMIKLYGKSLEHEKAT 814
+R D IE+ ++ + MI L+ K+ ++
Sbjct: 477 KRPDNIPRDTAIGILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVV 536
Query: 815 NLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRA-------------------------- 916
+ ++M+ G P++ + +++ + K + D+A
Sbjct: 537 EVFEKMRVVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLY 596
Query: 917 ---------ATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDN 1057
+LF+KL S+ + L+ + YERA + A R+++ + + N
Sbjct: 597 GARKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNRMNQKAN 652
>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 615 bits (1586), Expect = e-173
Identities = 305/370 (82%), Positives = 340/370 (91%)
Frame = +2
Query: 2 LYTPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAA 181
LY PS+FAYNV++RNVLRAKQW +AHGLFDEMR++ L+PDRYTYSTLIT FGK G+FD++
Sbjct: 139 LYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSS 198
Query: 182 LSWLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINV 361
L WLQ+MEQD+VSGDLVLYSNLI+L+RKL DYSKAISIFSRLK+S I PDL+AYNSMINV
Sbjct: 199 LFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINV 258
Query: 362 FGKAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLD 541
FGKAKLFREA LLL+EMR VQPDTVSYSTLL +YV+NQ+F++ALS+F EMNE CPLD
Sbjct: 259 FGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLD 318
Query: 542 LTTCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFR 721
LTTCNIMIDVYG L M KEADRLFWSMRKMGI+P+V+SYNTLLRVYGEA+LFGEAIHLFR
Sbjct: 319 LTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFR 378
Query: 722 LMQRKDIEQNVVTYNTMIKLYGKSLEHEKATNLVQEMQNRGIQPNAITYSTIISIWCKAG 901
LMQ KD++QNVVTYNTMI +YGK+LEHEKATNL+QEM RGI+PNAITYSTIISIW KAG
Sbjct: 379 LMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAG 438
Query: 902 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDNIPRETAIT 1081
KLDRAA LFQKLRSSGV ID+VLYQTMIVAYER GLVAHAKRLL ELKRPDNIPR+TAI
Sbjct: 439 KLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIA 498
Query: 1082 ILARAGRIEE 1111
ILARAGRIEE
Sbjct: 499 ILARAGRIEE 508
Score = 124 bits (312), Expect = 5e-26
Identities = 99/416 (23%), Positives = 184/416 (44%), Gaps = 66/416 (15%)
Frame = +2
Query: 8 TPSVFAYNVVIRNVLRAKQWGVAHGLFDEMRKRALAPDRYTYSTLITQFGKEGMFDAALS 187
TP + AYN +I +AK + A L EMR A+ PD +YSTL+ + F ALS
Sbjct: 246 TPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALS 305
Query: 188 WLQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGILPDLVAYNSMINVFG 367
+M + DL + +I++ +L +A +F ++ GI P++++YN+++ V+G
Sbjct: 306 LFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYG 365
Query: 368 KAKLFREAHLLLEEMRSAGVQPDTVSYSTLLNMYVENQQFIKALSVFFEMNEVNCPLDLT 547
+A LF EA L M+S VQ + V+Y+T++N+Y + + KA ++ EMN+ +
Sbjct: 366 EADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAI 425
Query: 548 TCNIMIDVYGLLDMVKEADRLFWSMRKMGIEPSVVSYNTLLRVYGEAELFGEAIHLFRLM 727
T + +I ++ + A LF +R G+ V Y T++ Y L A L +
Sbjct: 426 TYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHEL 485
Query: 728 QRKD----------------IEQ---------------NVVTYNTMIKLYGKSLEHEKAT 814
+R D IE+ ++ + MI L+ K+ ++
Sbjct: 486 KRPDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVV 545
Query: 815 NLVQEMQNRGIQPNAITYSTIISIWCKAGKLDRA-------------------------- 916
+ ++M+ G P++ + +++ + K + D+A
Sbjct: 546 EVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHFQMLSLY 605
Query: 917 ---------ATLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLSELKRPDN 1057
+LF+KL S+ + L+ + YERA + A R+++ + + N
Sbjct: 606 GARKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNRMNKKAN 661