BLASTX nr result
ID: Paeonia22_contig00012379
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia22_contig00012379 (1267 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 694 0.0 ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 681 0.0 gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 672 0.0 ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 672 0.0 ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 671 0.0 gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 671 0.0 ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 669 0.0 gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 667 0.0 ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 663 0.0 ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 663 0.0 ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 655 0.0 ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 655 0.0 ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 648 0.0 gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 647 0.0 ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ... 646 0.0 ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 639 0.0 ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 639 0.0 ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, part... 637 e-180 gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 616 e-174 ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 616 e-174 >ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera] gi|297733815|emb|CBI15062.3| unnamed protein product [Vitis vinifera] Length = 1127 Score = 694 bits (1792), Expect = 0.0 Identities = 342/413 (82%), Positives = 377/413 (91%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LREGIVIG KRFQFLAFSASQLRS+SVWMFASN+ VRV+DIR+WMG F KIRSVSKCAAR Sbjct: 450 LREGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAAR 509 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS QTL VP+QDVEVIPD+EV +DGF YCFSDGIGKISLSFA+QVAQKC L + Sbjct: 510 MGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQT 569 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDRNSFRKLSLRSSMLKFES NRMLNVTKWS S PCYLNREIVS Sbjct: 570 PSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVS 629 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLGVED FE + +EQM LLDKMLTNR+AAL+VL+ M G KNIL KMLLQGYEP+ Sbjct: 630 LLSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPN 689 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 VEPYLSMMLQ++ E+ LSD+++RCRIFVPK RVLIGCLDETGILNYGQVYVRV+MTKAE Sbjct: 690 VEPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEH 749 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 + +QSFFQKVD+TTS+VIGKV+VTKNPCLHPGDIRVL+AVYEV LEEKGLVDC++FPQK Sbjct: 750 KCRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQK 809 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFFI WD+GLIP QT+ PMDYT RRPR+MDHDVT+E Sbjct: 810 GERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRIMDHDVTLE 862 >ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis] Length = 1131 Score = 681 bits (1756), Expect = 0.0 Identities = 331/413 (80%), Positives = 373/413 (90%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L++GIVIGDK ++FLAFSASQLR++SVWMFASN+ V ED+R+WMG FNKI SVSKCAAR Sbjct: 466 LQDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAAR 525 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSSKQTLVVP+QDVE+IPDVEV +DG +YCFSDGIGKISLSFARQVAQKC LS Sbjct: 526 MGQLFSSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHT 585 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFES NRMLNVTKWS SMPC+LNREI+S Sbjct: 586 PSAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIIS 645 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLGV+D VFE MQ +Q+ LL KML NREAAL+VL ++G +KNIL+KMLLQGYEP+ Sbjct: 646 LLSTLGVKDDVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPN 705 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 VEPYLSMML SHHEN LSDLKSRCRI+VPKGR+LIGC DETGILNYGQV+VRV+MT+ EL Sbjct: 706 VEPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREEL 765 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 +S DQSFF +VD+ TSIV GKV+VTKNPCLHPGD+RVLEAVYE+ LEEK VDC++FPQK Sbjct: 766 ESKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQK 825 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGD FFISWD LIPC+T+ PMDYTGRR R+MDHDVT+E Sbjct: 826 GERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRIMDHDVTLE 878 >gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] Length = 1147 Score = 672 bits (1734), Expect = 0.0 Identities = 329/413 (79%), Positives = 371/413 (89%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L+ GIVIGDKRF+FLAFSASQLRS+SVWMFASN+ V+ EDIR+WMG F KIRS+SKCA+R Sbjct: 451 LQNGIVIGDKRFEFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASR 510 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS TLVVP+QDVE+I D+EV TDG +YCFSDGIGKISL FARQVA+KC L+ I Sbjct: 511 MGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHI 570 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGVVAVDRNSF K+SLR SMLKFES RMLNVTKWS SMPC+LNREIV+ Sbjct: 571 PSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVT 630 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 L STLG++D VFE MQ EQ+ LL KMLTNREAAL+ L + G ++KNIL++ML Q YEP+ Sbjct: 631 LFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEML-QFYEPN 689 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 V+PYLSMMLQ+H+ENLLSDLKSRCRIFVPKGR+LIGCLDETG LNYGQVY+ + M KAEL Sbjct: 690 VQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAEL 749 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 + DQS+F+KVDE T+IVIGKVVVTKNPCLHPGD+RVLEAVYE LEEKGLVDCLVFPQK Sbjct: 750 ECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQK 809 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFFISWDK LIPCQT+ PMDYTGRRPR+MDH+VT+E Sbjct: 810 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLE 862 >ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis] gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase, putative [Ricinus communis] Length = 983 Score = 672 bits (1734), Expect = 0.0 Identities = 322/413 (77%), Positives = 376/413 (91%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LR+GIVIG K+F+FLAFSASQLRS+SVWMFASN+ + E+IR+WMG FNKI S+SKCAAR Sbjct: 300 LRDGIVIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAAR 359 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSSKQT +V QD+E+IPD+EV +DG +YCFSDGIGKISLSFARQVAQKC L+ Sbjct: 360 MGQLFSSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRT 419 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDRNSFRKLSLR SM KFES NRMLNVTKWS SMPCYLNREI++ Sbjct: 420 PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIIT 479 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LL+TLGV+D +FE +Q +Q++LL++MLTNRE+AL VL+ ++ + KNILIKML+QGYEP+ Sbjct: 480 LLTTLGVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPN 539 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 VEPYLSMMLQ++HENLL +L+SRCRIFVPKGR+LIGCLDET IL+YGQVYVR++MTKAEL Sbjct: 540 VEPYLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAEL 599 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 Q DQ+ F +VDETT++V GKV+VTKNPCLHPGDIRVLEAVYEV LEEKGLVDC++FPQK Sbjct: 600 QDADQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQK 659 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFFISWDKGLIP +T++PMDY GRRPR MDHDVT+E Sbjct: 660 GERPHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLE 712 >ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa] gi|222868578|gb|EEF05709.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa] Length = 1110 Score = 671 bits (1731), Expect = 0.0 Identities = 323/413 (78%), Positives = 371/413 (89%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LR+G VIG KRF+FLAFSASQLRS+SVWMFASN V+ EDIRKWMG F+KIRSVSKCAAR Sbjct: 445 LRDGFVIGAKRFEFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAAR 504 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS QT VVP+QDVE+IPD+EV TDG YCFSDGIGKISLSFA+QVA KC LS Sbjct: 505 MGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHT 564 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKF+S NRMLNVTKWS SMPCYLNREI+S Sbjct: 565 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIIS 624 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLGV D +F+ +Q +Q+ L KMLTN+E+AL+VL+ ++ +KNIL++MLLQGYEP+ Sbjct: 625 LLSTLGVADEIFQALQQKQLYRLRKMLTNKESALDVLENLAWADSKNILVQMLLQGYEPN 684 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 VEPYLSMMLQ++HEN L +L+SRCRIFVPKGR+LIGCLDE+GIL+YGQVYVR++MTKAEL Sbjct: 685 VEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTKAEL 744 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 Q DQSFF+KVDE+TS +IG+V VTKNPCLHPGDIRVLEAVY+V LEEKGLVDC++FPQ Sbjct: 745 QCCDQSFFRKVDESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQN 804 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 G RPHPNECSGGDLDGDQFFISWD+GL+PC T+ PMDY G R R+MDH+VT+E Sbjct: 805 GGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRIMDHNVTLE 857 >gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] Length = 1115 Score = 671 bits (1730), Expect = 0.0 Identities = 328/413 (79%), Positives = 371/413 (89%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LR GI+IG KR++FLAFSASQLRSS+VWMFASN+NV+ EDIR+WMG FNKIRSVSKCAAR Sbjct: 448 LRNGILIGAKRYEFLAFSASQLRSSAVWMFASNDNVKAEDIREWMGCFNKIRSVSKCAAR 507 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS+QTL+VP QD+E+IPDVEV TDG YCFSDGIGKIS SFARQVAQKC L E Sbjct: 508 MGQLFSSSRQTLIVPTQDLEIIPDVEVTTDGIDYCFSDGIGKISSSFARQVAQKCGLKET 567 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AV+R+SFRKLSLRSSMLKFESSNRMLNVTKWS SMPCYLNREIVS Sbjct: 568 PSAFQIRYGGYKGVIAVNRSSFRKLSLRSSMLKFESSNRMLNVTKWSGSMPCYLNREIVS 627 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLS+LGV+D F + EQ+ LL KM TNREAAL VL+ ++G + NIL+KMLLQGYEP+ Sbjct: 628 LLSSLGVKDESFLALLREQLLLLGKMRTNREAALNVLENLNGSDSSNILVKMLLQGYEPN 687 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYLSMM+QS++EN LSDLK+RCRIFVPKG+VLIGCLDETGIL YGQVYVR++M KAEL Sbjct: 688 AEPYLSMMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAEL 747 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 ++ +QSFF+KVD+ TSIV+GKVVVTKNPCLHPGD+RVLEAVY+ LEE+GLVDCLVFPQK Sbjct: 748 EAGNQSFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQK 807 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGD FFISWD LIP +T PMDY GRRPR+MDHDVT+E Sbjct: 808 GERPHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLE 860 >ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao] gi|590663258|ref|XP_007036162.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao] gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao] Length = 1149 Score = 669 bits (1726), Expect = 0.0 Identities = 324/413 (78%), Positives = 369/413 (89%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L+ GIVIGDKRF+FLAFSASQLRS+SVWMFASN+ V ED+R+WMG F KIRSVSKCAAR Sbjct: 458 LQHGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAAR 517 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS TLVVP+QDV++IPD+EV +DG +YCFSDGIGKISL FAR+VAQKC L++ Sbjct: 518 MGQLFSSSLPTLVVPVQDVKIIPDIEVTSDGINYCFSDGIGKISLPFAREVAQKCGLNDT 577 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGVVAVDRNSFRK+SLR SM KFES RMLNVTKWS SMPC+LNREIV+ Sbjct: 578 PSAFQIRYGGYKGVVAVDRNSFRKMSLRGSMHKFESKIRMLNVTKWSESMPCFLNREIVT 637 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVL-DMSGDHTKNILIKMLLQGYEPD 717 LLSTLG++D FE +Q EQ+ LL +MLTNREAAL+VL + G ++NIL+KMLLQGYEP+ Sbjct: 638 LLSTLGIKDEAFETLQQEQLHLLGQMLTNREAALDVLQSLCGADSQNILVKMLLQGYEPN 697 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 VEPYLSMML ++H +LLSDLK RCRI+VPKG+VL+GCLDET LNYGQVYVR+S+ KAEL Sbjct: 698 VEPYLSMMLLANHVSLLSDLKCRCRIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAEL 757 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 + DQ+FF KVDE T+IVIGKVVVTKNPCLHPGD+RVLEAVYE LE+KGLVDCLVFPQK Sbjct: 758 EHADQNFFHKVDEKTAIVIGKVVVTKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQK 817 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFFISWDK LIPCQTD PMDYTG RPR+MDH+VT+E Sbjct: 818 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTDAPMDYTGSRPRIMDHEVTLE 870 >gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] Length = 1147 Score = 667 bits (1720), Expect = 0.0 Identities = 327/413 (79%), Positives = 370/413 (89%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L+ GIVIGDKRF+FLAFSASQLRS+SVWMFASN+ V+ EDIR+WMG F KIRS+SKCA+R Sbjct: 451 LQNGIVIGDKRFKFLAFSASQLRSNSVWMFASNDEVKAEDIREWMGCFKKIRSISKCASR 510 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS TLVVP+QDVE+I D+EV TDG +YCFSDGIGKISL FARQVA+KC L+ I Sbjct: 511 MGQLFSSSMPTLVVPVQDVEIIDDIEVKTDGINYCFSDGIGKISLPFARQVAEKCGLNHI 570 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGVVAVDRNSF K+SLR SMLKFES RMLNVTKWS SMPC+LNREIV+ Sbjct: 571 PSAFQIRYGGYKGVVAVDRNSFWKMSLRDSMLKFESKVRMLNVTKWSESMPCFLNREIVT 630 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 L STLG++D VFE MQ EQ+ LL KMLTNREAAL+ L + G ++KNIL++ML Q EP+ Sbjct: 631 LFSTLGIKDEVFERMQEEQLCLLGKMLTNREAALDTLQSLGGVNSKNILVEML-QFDEPN 689 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 V+PYLSMMLQ+H+ENLLSDLKSRCRIFVPKGR+LIGCLDETG LNYGQVY+ + M KAEL Sbjct: 690 VQPYLSMMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAEL 749 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 + DQS+F+KVDE T+IVIGKVVVTKNPCLHPGD+RVLEAVYE LEEKGLVDCLVFP+K Sbjct: 750 ECADQSYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEK 809 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFFISWDK LIPCQT+ PMDYTGRRPR+MDH+VT+E Sbjct: 810 GERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHEVTLE 862 >ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica] gi|462407047|gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica] Length = 1118 Score = 663 bits (1711), Expect = 0.0 Identities = 322/413 (77%), Positives = 366/413 (88%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LR+GIVIG+KRF+FLAFSASQLRSSSVWMF+SN+NV+ EDIR+WMG F+KIRS+SKCAAR Sbjct: 451 LRDGIVIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAAR 510 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS QTLVVP QDVE+IPDVE +DG +YCFSDGIGKISLSFAR+VAQKC L + Sbjct: 511 MGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQT 570 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVD SFRKLSLRSSMLKFES NRMLNVTKWS +MPCYLNREI+S Sbjct: 571 PSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREIIS 630 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLGV+D FE +Q EQ+RLL KM T R AAL V + ++G +KN L+KMLL GYEP+ Sbjct: 631 LLSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEPN 690 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYLSMMLQ+++EN LSDLKSRCRIFVPKGRVL+GCLDETG L+YGQVYVR++MTKAE Sbjct: 691 AEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQ 750 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 + DQSFFQKVDETT +V GKVVVTKNPCLHPGD+RVL+AVY+V LEEK +VDCL+FPQK Sbjct: 751 EMGDQSFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQK 810 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGD FFISWDK L+P T PMDY+ RRPR+MDH VT+E Sbjct: 811 GERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLE 863 >ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum] Length = 1119 Score = 663 bits (1710), Expect = 0.0 Identities = 321/413 (77%), Positives = 364/413 (88%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LREGIVIG KRF FLAFSASQLRS+SVWMFASNE V+ EDIR+WMG FNKIRS+SKCAAR Sbjct: 452 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAAR 511 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFS+S QT+ V +Q VE++PD+EV +DG SYCFSDGIGKIS +FARQVAQKC L+ Sbjct: 512 MGQLFSTSVQTMEVKLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHT 571 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFES NRMLN+TKWS +MPCYLNREIV Sbjct: 572 PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 631 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLGVED FE++ + LL KMLT EAAL+VL+ M G K IL++MLLQGY P+ Sbjct: 632 LLSTLGVEDKAFEDLLDNHLCLLGKMLTTNEAALDVLESMGGGEVKKILMRMLLQGYAPN 691 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYLSMMLQSH EN +SDL+SRCRIF+PKGR+L+GCLDETGIL YGQVYVR++MTKAEL Sbjct: 692 QEPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAEL 751 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 Q+ Q+FFQKVDETT++V GKVVVTKNPCLHPGD+RVLEAVYEVTLEEK VDC++FPQK Sbjct: 752 QNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQK 811 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGD +FI WD+ LIPCQT TPMDYTGRRPR+MDH+VT+E Sbjct: 812 GERPHPNECSGGDLDGDLYFICWDESLIPCQTVTPMDYTGRRPRIMDHEVTLE 864 >ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp. vesca] Length = 1136 Score = 655 bits (1691), Expect = 0.0 Identities = 318/413 (76%), Positives = 365/413 (88%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LR+GIVIGDKRF+FLAFSASQLRS+SVWMFASN++V+ EDIR WMG FNKIRSVSKCAAR Sbjct: 453 LRDGIVIGDKRFEFLAFSASQLRSNSVWMFASNDSVKAEDIRDWMGCFNKIRSVSKCAAR 512 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS QTL VP +DVE+IPD+E TDG SYCFSDGIGKISLSFARQVAQKC L++ Sbjct: 513 MGQLFSSSTQTLTVPQKDVELIPDIETTTDGVSYCFSDGIGKISLSFARQVAQKCGLNDT 572 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDRNSFRKLSLRSSMLKF+S NRMLNVTKWS SMPC+LNREI++ Sbjct: 573 PSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFDSDNRMLNVTKWSSSMPCFLNREIIT 632 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 L+STLGVED FE +Q EQ+ LL +M +R AL L+ +SG + NIL+K+LLQGYEP+ Sbjct: 633 LMSTLGVEDEAFEALQQEQLDLLGRMRKDRNVALSSLEKLSGADSNNILVKLLLQGYEPN 692 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 +EPYLSMMLQ+H+E+ L+DLKSRCR++VPKGR+L+GCLDETG LNYGQVY+R++MTKAE Sbjct: 693 LEPYLSMMLQAHYEHHLADLKSRCRMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQ 752 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 + QSFFQ+VDE T IV GKVVVTKNPCLHPGDIRVLEAVY+V LEEK +VDC++FPQK Sbjct: 753 EMGHQSFFQRVDEATCIVTGKVVVTKNPCLHPGDIRVLEAVYDVGLEEKNMVDCILFPQK 812 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGD FFISWDK LIP T PMDY+ RRPR MDHDVT+E Sbjct: 813 GERPHPNECSGGDLDGDLFFISWDKSLIPPTTVPPMDYSARRPRNMDHDVTLE 865 >ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum] Length = 1119 Score = 655 bits (1690), Expect = 0.0 Identities = 318/413 (76%), Positives = 362/413 (87%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LREGIVIG KRF FLAFSASQLRS+SVWMFASNE V+ EDIR+WMG FNKIRS+SKCAAR Sbjct: 452 LREGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAAR 511 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFS+S QT+ V +Q VE++PD+EV +DG SYCFSDGIGKIS +FARQVAQKC L+ Sbjct: 512 MGQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHT 571 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFES NRMLN+TKWS +MPCYLNREIV Sbjct: 572 PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 631 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLGVED E++ +RLL KMLT EAAL+VL+ M G K IL++MLLQGY P+ Sbjct: 632 LLSTLGVEDKALEDLLDNHLRLLGKMLTTNEAALDVLESMGGGDVKKILMRMLLQGYAPN 691 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYLSMMLQSH EN +SDL+SRCRIF+PKGR+L+GCLDETGIL YG+VYVR++MTKAEL Sbjct: 692 REPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAEL 751 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 Q+ Q+FFQKVDETT++V GKVVVTKNPCLHPGD+RVLEAVYEVTLEEK VDC++FPQ Sbjct: 752 QNGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQN 811 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGD +FI WD+ LIP QT TPMDYTGRRPR+MDH+VT+E Sbjct: 812 GERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMDYTGRRPRIMDHEVTLE 864 >ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana] gi|75318859|sp|O82504.1|RDR2_ARATH RecName: Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2; AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1; AltName: Full=RNA-directed RNA polymerase 2 gi|3600048|gb|AAC35535.1| similar to hypothetical proteins in Schizosaccharomyces pombe (GB:Z98533) and C. elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana] gi|4850292|emb|CAB43048.1| putative RNA-directed RNA polymerase [Arabidopsis thaliana] gi|7267812|emb|CAB81214.1| putative RNA-directed RNA polymerase [Arabidopsis thaliana] gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana] Length = 1133 Score = 648 bits (1671), Expect = 0.0 Identities = 307/413 (74%), Positives = 363/413 (87%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L EGI +G KRF+FLAFSASQLR +SVWMFASNE V+ EDIR+WMG F KIRS+SKCAAR Sbjct: 458 LGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAAR 517 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFS+S+QTL+V QDVE IPD+EV TDG YCFSDGIGKISL+FA+QVAQKC LS + Sbjct: 518 MGQLFSASRQTLIVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHV 577 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDR+SFRKLSLR SMLKF+S+NRMLNVT+W+ SMPC+LNREI+ Sbjct: 578 PSAFQIRYGGYKGVIAVDRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIIC 637 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLG+ED +FE MQ + +L ML +R+AAL VL +SG+++KN+L+KMLLQGY P Sbjct: 638 LLSTLGIEDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPS 697 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYLSMML+ HHE+ LS+LKSRCRI VPKGR+LIGC+DE GIL YGQVYVRV++TKAEL Sbjct: 698 SEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAEL 757 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 +S DQS+F+K+DE TS+VIGKVVVTKNPCLHPGDIRVL+A+YEV EEKG +DC++FPQK Sbjct: 758 KSRDQSYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQK 817 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFF+SWD+ +IP + D PMDY G RPR+MDHDVT+E Sbjct: 818 GERPHPNECSGGDLDGDQFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLE 870 >gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] Length = 1120 Score = 647 bits (1668), Expect = 0.0 Identities = 317/413 (76%), Positives = 359/413 (86%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LR+G+VIG KRF FLAFSASQLRS+SVWMFASNE+V+ EDIR+WMG FNKIRSVSKCAAR Sbjct: 453 LRDGLVIGSKRFLFLAFSASQLRSNSVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAAR 512 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFS+S QT+ V VE++PD+EV +DG SYCFSDGIGKIS +FA QVAQKC LS Sbjct: 513 MGQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYT 572 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFES NRMLN+TKWS +MPCYLNREIV Sbjct: 573 PSAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVI 632 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLGVED VFE++ + LL KMLT EAAL+VL+ + G K IL++ML QGY P+ Sbjct: 633 LLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEAALDVLESIGGGDVKKILMRMLHQGYAPN 692 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 +EPYLSMMLQSH EN LSDL+SRCRIF+ KGRVL+GCLDETGILNYGQVY R++MTKAEL Sbjct: 693 LEPYLSMMLQSHFENQLSDLRSRCRIFIHKGRVLVGCLDETGILNYGQVYARITMTKAEL 752 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 QS QSFFQKVDETT++V G VVVTKNPCLHPGD+RVLEAVYEV LEEK VDC++FPQK Sbjct: 753 QSAQQSFFQKVDETTAVVRGNVVVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQK 812 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGD +FISWD+ LIP QT TPMDYTGRR R+MDH+VT++ Sbjct: 813 GERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPMDYTGRRTRIMDHEVTLQ 865 >ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata] gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata] Length = 1134 Score = 646 bits (1666), Expect = 0.0 Identities = 306/413 (74%), Positives = 361/413 (87%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L EGI +G KRF+FLAFSASQLR +SVWMFASNE ++ EDIR+WMG F KIRS+SKCAAR Sbjct: 459 LGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKIKAEDIREWMGCFRKIRSISKCAAR 518 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFS+S+QTL V QDVE IPD+EV TDG YCFSDGIGKISL+FA+QVAQKC LS + Sbjct: 519 MGQLFSASRQTLNVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHV 578 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDR+SFRK+SLR SMLKF+S+NRMLNVT+W+ SMPC+LNREI+ Sbjct: 579 PSAFQIRYGGYKGVIAVDRSSFRKMSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIIC 638 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLG+ED VFE MQ + +L ML +R+AAL VL +SG+++KN+L+KMLLQGY P Sbjct: 639 LLSTLGIEDAVFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPS 698 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYLSMML+ HHE+ LS+LKSRCRI VPKGR+LIGC+DE GIL YGQV+VRV++TKAEL Sbjct: 699 SEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVFVRVTLTKAEL 758 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 +S +QS+F K+DE TS+VIGKVVVTKNPCLHPGDIRVL+A+YEV EEKG +DC++FPQK Sbjct: 759 KSREQSYFHKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVNFEEKGFLDCIIFPQK 818 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFF+SWD+ LIP Q D PMDY G RPR+MDHDVT+E Sbjct: 819 GERPHPNECSGGDLDGDQFFVSWDEKLIPSQMDPPMDYAGSRPRIMDHDVTLE 871 >ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum] gi|557097970|gb|ESQ38406.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum] Length = 1124 Score = 639 bits (1649), Expect = 0.0 Identities = 304/413 (73%), Positives = 358/413 (86%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L EGI +G KRF+FLAFSASQLR +SVWMFASNE V+ E++R+WMG F KIRS+SKCAAR Sbjct: 456 LGEGITVGPKRFEFLAFSASQLRGNSVWMFASNEKVKAENVREWMGCFRKIRSISKCAAR 515 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFS+S+QTL V QDVE IPD+EV TDG YCFSDGIGKISL+FA+QVAQKC LS I Sbjct: 516 MGQLFSASRQTLTVRPQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLSHI 575 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIR+GGYKGV+AVDR+SFRKLSLR SMLKFES+NRMLNVT+W+ SMPC+LNREI+ Sbjct: 576 PSAFQIRFGGYKGVIAVDRSSFRKLSLRDSMLKFESNNRMLNVTRWTESMPCFLNREIIC 635 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLG+ED VFE MQ + +L ML +R+AAL VL +SG+ +KN+L+KMLL GY P Sbjct: 636 LLSTLGIEDAVFEAMQRGHLSMLGNMLEDRDAALNVLQKLSGEGSKNLLVKMLLLGYAPS 695 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYL MML+ HHE+ LS+LKSRCRI VPKGR+LIGC+DE GIL YGQVYVRV++TKAEL Sbjct: 696 SEPYLLMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAEL 755 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 +S +Q +F K+DE TS+VIGKVVVTKNPCLHPGDIRVL+A+YE++ E+KG +DC+VFPQK Sbjct: 756 ESREQGYFHKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEISFEQKGFLDCIVFPQK 815 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFF+SWD+ LIP Q D PMDY G RPR+MDHDVT+E Sbjct: 816 GERPHPNECSGGDLDGDQFFVSWDEKLIPSQMDPPMDYAGSRPRIMDHDVTLE 868 >ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus] gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase 2 [Cucumis sativus] Length = 1117 Score = 639 bits (1649), Expect = 0.0 Identities = 306/413 (74%), Positives = 362/413 (87%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LR+GIVIG KRF+FLAFSASQLRS+SVWMFAS++N++ E+IR+WMG F KIRS+SKCAAR Sbjct: 450 LRDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAAR 509 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS QTLVVP +DVE+IPD+EV TDG YCFSDGIGKISLSFARQVA KC ++ I Sbjct: 510 MGQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHI 569 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDRNSFRKLSLR SMLKFES N+MLNVTK SMPCYLNREI + Sbjct: 570 PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIAT 629 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLGV+D FE +Q EQ+ LL +MLT+++ AL VL+ G + NIL++ML GYEP+ Sbjct: 630 LLSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPN 689 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 +EPYLSMMLQ+H+ NL SDL+SRCRIFVPKGR+L+GCLDETGILNYGQVY +++TK+EL Sbjct: 690 IEPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSEL 749 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 QS +Q++F +DET SI++GKVVVTKNPCLHPGD+RVLEA++ V LEEKGLVDCL+FPQK Sbjct: 750 QSRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQK 809 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 G RPH NECSGGDLDGD +FISWD+ LIP +T+ PMDYTGRRPR+MDHDV +E Sbjct: 810 GARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVKLE 862 >ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, partial [Capsella rubella] gi|482555639|gb|EOA19831.1| hypothetical protein CARUB_v10000076mg, partial [Capsella rubella] Length = 1165 Score = 637 bits (1643), Expect = e-180 Identities = 303/413 (73%), Positives = 357/413 (86%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L EGI +G KRF+FLAFSASQLR +SVWMFASN+ V+ EDIR+WMG F KIRS+SKCAAR Sbjct: 490 LGEGITVGPKRFEFLAFSASQLRGNSVWMFASNKKVKAEDIREWMGCFRKIRSISKCAAR 549 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFS+S+QTL V QDVE IPD+EV TDG YCFSDGIGKISL+FA+QVAQKC L + Sbjct: 550 MGQLFSASRQTLNVRAQDVEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLDYV 609 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AVDR+SFRK+SLR SMLKF+S+NRMLNVT+W+ SMPC+LNREI+ Sbjct: 610 PSAFQIRYGGYKGVIAVDRSSFRKMSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIIC 669 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYEPD 717 LLSTLG+ED VFE MQ + +L ML +R AAL VL +SG+++KN+L+ MLL GY P Sbjct: 670 LLSTLGIEDAVFEAMQAMHLSMLGNMLEDRNAALNVLQKLSGENSKNLLVDMLLHGYAPS 729 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYLSMML+ HHE+ LS+LKSRCRI VPKGR+LIGC+DE GIL YGQVYVRV++TKAEL Sbjct: 730 SEPYLSMMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAEL 789 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 +S +QS+F+K+DE TS+VIGKVVVTKNPCLHPGDIRVL+A+YEV EEKG +DC++FPQK Sbjct: 790 KSREQSYFKKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVNFEEKGFLDCIIFPQK 849 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGDQFF+SWD+ LIP Q D PMDY RPR+MDHDVT+E Sbjct: 850 GERPHPNECSGGDLDGDQFFVSWDEKLIPSQMDPPMDYAASRPRIMDHDVTLE 902 >gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] Length = 972 Score = 616 bits (1589), Expect = e-174 Identities = 297/413 (71%), Positives = 361/413 (87%), Gaps = 1/413 (0%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 L++G+VIGDK+F+FLAFSASQLRS+SVWMFASN++V+ EDIR+WMG FNKIRS+SKCAAR Sbjct: 459 LQDGLVIGDKKFEFLAFSASQLRSNSVWMFASNDHVKAEDIREWMGCFNKIRSISKCAAR 518 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKCDLSEI 360 MGQLFSSS QTL V +DVE+IP++EV++DG +CFSDGIGKIS+ FAR+V +K LS I Sbjct: 519 MGQLFSSSMQTLKVIPRDVELIPEIEVVSDGVKHCFSDGIGKISIPFAREVVRKLGLSHI 578 Query: 361 PSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREIVS 540 PSAFQIRYGGYKGV+AV+R+SFRKLSLRSSMLKFES+N MLN+TKWS S PCYLNREI++ Sbjct: 579 PSAFQIRYGGYKGVIAVNRHSFRKLSLRSSMLKFESTNCMLNITKWSESQPCYLNREIIT 638 Query: 541 LLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLDMS-GDHTKNILIKMLLQGYEPD 717 LLSTLGV+D+VF MQ EQ++LL MLT+ +AAL VL+ + G K+ + +MLLQGY+P Sbjct: 639 LLSTLGVKDSVFLAMQDEQLQLLGTMLTDAKAALNVLESTGGGDMKSSMARMLLQGYDPS 698 Query: 718 VEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKAEL 897 EPYL MLQS+ EN +SD++SRCRIFVPKGRVL+GCLDE+G L YGQV+VR++M AEL Sbjct: 699 NEPYLLTMLQSYLENQISDIRSRCRIFVPKGRVLVGCLDESGTLEYGQVFVRLTMNTAEL 758 Query: 898 QSDDQSFFQKVDETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLVFPQK 1077 + DQ FFQ+VDETTSI+ GKVVVTKNPCLHPGD+RVLEAVY++ L+E +VDCLVFPQK Sbjct: 759 EGGDQPFFQRVDETTSILRGKVVVTKNPCLHPGDVRVLEAVYDIKLQEDNMVDCLVFPQK 818 Query: 1078 GERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 GERPHPNECSGGDLDGD +FISWD L+P +T TPMDYTGRRPR+M+H+VT+E Sbjct: 819 GERPHPNECSGGDLDGDLYFISWDVDLVPPRTVTPMDYTGRRPRIMNHEVTLE 871 >ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum] Length = 1122 Score = 616 bits (1589), Expect = e-174 Identities = 308/417 (73%), Positives = 361/417 (86%), Gaps = 5/417 (1%) Frame = +1 Query: 1 LREGIVIGDKRFQFLAFSASQLRSSSVWMFASNENVRVEDIRKWMGSFNKIRSVSKCAAR 180 LR+GIVIG KRF+FLAFSASQLRS+SVW+FASN+ V+ EDIR+WMGSF IRSVSKCAAR Sbjct: 453 LRDGIVIGSKRFEFLAFSASQLRSNSVWLFASNDKVKAEDIREWMGSFTNIRSVSKCAAR 512 Query: 181 MGQLFSSSKQTLVVPIQDVEVIPDVEVITDGFSYCFSDGIGKISLSFARQVAQKC--DLS 354 MGQLFSSSKQT + QDV++IPD+E+ +DG +YCFSDGIGKISLSFA+Q+AQK D S Sbjct: 513 MGQLFSSSKQTFEMAPQDVDIIPDIELTSDGINYCFSDGIGKISLSFAKQLAQKLKLDQS 572 Query: 355 EIPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFESSNRMLNVTKWSVSMPCYLNREI 534 IPSAFQIRYGGYKGV+AVDR+SFRKLS+R+SMLKFES NRML VTKWS SMPC+LNREI Sbjct: 573 RIPSAFQIRYGGYKGVIAVDRHSFRKLSMRNSMLKFESKNRMLCVTKWSESMPCFLNREI 632 Query: 535 VSLLSTLGVEDTVFEEMQHEQMRLLDKMLTNREAALEVLD-MSGDHTKNILIKMLLQGYE 711 +SLLSTLGV+D MQ EQ++LL KMLT+REAAL+VL+ +SG +++IL+KML YE Sbjct: 633 ISLLSTLGVKDEALLAMQEEQLQLLGKMLTDREAALDVLESLSGADSRSILVKMLNGFYE 692 Query: 712 PDVEPYLSMMLQSHHENLLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVYVRVSMTKA 891 P+ EPYLSMML++H+ LSDLKSRCRIFVPKGRVLIGCLDETGILNYGQV+VR+++TK Sbjct: 693 PNSEPYLSMMLKAHYAYQLSDLKSRCRIFVPKGRVLIGCLDETGILNYGQVFVRITVTKT 752 Query: 892 ELQSDDQSFFQKVD--ETTSIVIGKVVVTKNPCLHPGDIRVLEAVYEVTLEEKGLVDCLV 1065 + + D++ Q VD ++T I++GKVVVTKNPCLHPGDIRVL+A+Y LEEKGL DCLV Sbjct: 753 KEKIGDENL-QNVDGDDSTRIIVGKVVVTKNPCLHPGDIRVLDAIYNEELEEKGLRDCLV 811 Query: 1066 FPQKGERPHPNECSGGDLDGDQFFISWDKGLIPCQTDTPMDYTGRRPRVMDHDVTIE 1236 FPQKG RPHPNECSGGDLDGD FFISWDK LIP QTD PMDYTGRRPR+MDH VT+E Sbjct: 812 FPQKGPRPHPNECSGGDLDGDLFFISWDKDLIPPQTDNPMDYTGRRPRIMDHKVTLE 868