BLASTX nr result

ID: Paeonia22_contig00012158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00012158
         (282 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus]             171   7e-41
ref|NP_733974.1| movement protein [Cycas necrotic stunt virus]         72   6e-11
ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus] gi|1...    72   6e-11

>gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus]
          Length = 1289

 Score =  171 bits (434), Expect = 7e-41
 Identities = 75/93 (80%), Positives = 83/93 (89%)
 Frame = -3

Query: 280 PDEILLYAKYYWEIQSRFTQGMHNMPELTNFTDWLQALARCALAPECYFRNTHRFSGSGA 101
           PDE+LLYAKYYW+ Q RFT GM N+PEL  F  WLQALARCALAPE +FRNTHRFSGSGA
Sbjct: 115 PDEVLLYAKYYWDTQRRFTGGMPNVPELATFDAWLQALARCALAPEYHFRNTHRFSGSGA 174

Query: 100 HDEKFGGPVSYRYLPTCTHCVQVVNNWYIAKFK 2
           HDEKFGGP+S+R+LP CTHCVQ+VNNWYIAKFK
Sbjct: 175 HDEKFGGPMSFRFLPVCTHCVQLVNNWYIAKFK 207


>ref|NP_733974.1| movement protein [Cycas necrotic stunt virus]
          Length = 683

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/83 (42%), Positives = 42/83 (50%)
 Frame = -3

Query: 250 YWEIQSRFTQGMHNMPELTNFTDWLQALARCALAPECYFRNTHRFSGSGAHDEKFGGPVS 71
           YW+ Q RFT GMHN+PEL  F  WLQ                  F       +   G   
Sbjct: 76  YWDTQRRFTGGMHNVPELATFDAWLQHWRVVHWRLNIISEILIDFQALVRMMKNLAGQCH 135

Query: 70  YRYLPTCTHCVQVVNNWYIAKFK 2
           + + P CTHCVQ+VNNWYIA+FK
Sbjct: 136 FDFYPVCTHCVQLVNNWYIAEFK 158


>ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus]
           gi|124106315|sp|Q8QVU9.2|POL2_CNSV RecName: Full=RNA2
           polyprotein; AltName: Full=P2; Contains: RecName:
           Full=Protein 2A; Short=P2A; Contains: RecName:
           Full=Movement protein; AltName: Full=2B-MP; Contains:
           RecName: Full=Coat protein; AltName: Full=2C-CP
           gi|84369993|dbj|BAB89370.2| polyprotien 2 [Cycas
           necrotic stunt virus]
          Length = 1240

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/83 (42%), Positives = 42/83 (50%)
 Frame = -3

Query: 250 YWEIQSRFTQGMHNMPELTNFTDWLQALARCALAPECYFRNTHRFSGSGAHDEKFGGPVS 71
           YW+ Q RFT GMHN+PEL  F  WLQ                  F       +   G   
Sbjct: 76  YWDTQRRFTGGMHNVPELATFDAWLQHWRVVHWRLNIISEILIDFQALVRMMKNLAGQCH 135

Query: 70  YRYLPTCTHCVQVVNNWYIAKFK 2
           + + P CTHCVQ+VNNWYIA+FK
Sbjct: 136 FDFYPVCTHCVQLVNNWYIAEFK 158


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