BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00010972
         (970 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   317   1e-97
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       314   1e-95
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               355   2e-95
emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]         314   1e-94
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         314   1e-94
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc...   314   1e-94
gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]     313   1e-94
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         313   1e-94
gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]     313   1e-94
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   319   2e-94
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   313   2e-94
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   313   2e-94
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc...   313   2e-94
gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]     312   3e-94
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   312   3e-94
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     312   3e-94
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   312   3e-94
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...   312   3e-94
gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subc...   312   3e-94
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...   312   3e-94

>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  317 bits (813), Expect(2) = 1e-97
 Identities = 156/281 (55%), Positives = 211/281 (75%), Gaps = 8/281 (2%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLK-KDI------EKSLPVQQDASPENSEIELR-SKRTKKA 813
            I  N IME+++  FFE+IFP++ K++       ++  +    + +  ++ELR SKR +  
Sbjct: 723  IAVNVIMESRDVTFFESIFPMRDKEVVAPDGPSRTYSLPSSVNDQTPDLELRRSKRQRTE 782

Query: 812  TCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EIVDLPPGFKTI 633
               GDD+  +LV E+P++  EA TS DA +W+EA+ SE++SI+SN   EI DLP G K +
Sbjct: 783  KSLGDDYIIYLVDEEPRSLTEAYTSPDAEYWREAVLSEMDSIISNGTWEITDLPAGCKPV 842

Query: 632  GCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIRILVALAAVCK 453
            GCKWIF++K  PDG I+KYKARLVAKG+TQK+  DYFDT++PVAR+ +IR+L+ALAA  K
Sbjct: 843  GCKWIFRRKRRPDGTIEKYKARLVAKGFTQKKEEDYFDTYSPVARLPTIRVLLALAAAYK 902

Query: 452  LFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQAPKQWHEKFD 273
            L +HQMDVKTAFLNGELEEEIYM  PEG V+ G + KVCRL+KSLYGLKQAP+QWHEKF+
Sbjct: 903  LLVHQMDVKTAFLNGELEEEIYMQQPEGFVVKGQESKVCRLIKSLYGLKQAPRQWHEKFN 962

Query: 272  SVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            + L + GF +N+++KC+YY+ F     VI+CLYVDD+LIFG
Sbjct: 963  NTLTTAGFCVNEADKCVYYR-FSGGKGVIMCLYVDDILIFG 1002



 Score = 67.4 bits (163), Expect(2) = 1e-97
 Identities = 31/53 (58%), Positives = 38/53 (71%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT LE I ETK+FLS  +++KDLGE +VIL +K+ K  DG  LSQ HYVE
Sbjct: 999  LIFGTDLEAIMETKLFLSKNFDMKDLGEADVILNIKLIKGEDGITLSQSHYVE 1051


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  314 bits (804), Expect(2) = 1e-95
 Identities = 160/292 (54%), Positives = 211/292 (72%), Gaps = 19/292 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDI------------EKSLPVQQDASP-------ENSE 846
            +  +TIME+++A FFE+IFP+K DI            E + P++    P       ++++
Sbjct: 668  VYVDTIMESRDATFFEHIFPMK-DIHSNSRYSSEIIPEHNTPIESFEQPHEIVLEEDDND 726

Query: 845  IELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*E 666
               RSKR +    FGDDF  +LV + P T  EA  S DA  WKEA+++E++SILSN   E
Sbjct: 727  APKRSKRQRVEKSFGDDFIVYLVDDTPTTIAEAFASSDADDWKEAVHNEMDSILSNGTWE 786

Query: 665  IVDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSI 486
            I D P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++I
Sbjct: 787  ITDRPYGCKPVGCKWVFKKKLKPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARMTTI 846

Query: 485  RILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLK 306
            R+L++LAA   L +HQMDVKTAFLNGEL+EEIYM+ P+G V+ G + KVC+L+KSLYGLK
Sbjct: 847  RVLLSLAASYGLLVHQMDVKTAFLNGELDEEIYMEQPDGFVVKGQESKVCKLLKSLYGLK 906

Query: 305  QAPKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            QAPKQWHEKFD+ L S GF IN++++C+YY+       VI+CLYVDD+LIFG
Sbjct: 907  QAPKQWHEKFDTTLTSAGFAINEADRCVYYRC-GGGEGVILCLYVDDILIFG 957



 Score = 64.3 bits (155), Expect(2) = 1e-95
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+++VINE K FLS  +++KDLGE +VIL +K+ K   G  LSQ HYVE
Sbjct: 954  LIFGTNIDVINEVKSFLSKSFDMKDLGEADVILNIKLIKADGGITLSQSHYVE 1006


>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  355 bits (910), Expect = 2e-95
 Identities = 178/273 (65%), Positives = 212/273 (77%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKSLPVQQDASPENSEIELRSKRTKKATCFGDDFY 789
            IE NTI+ETKNA+FFE+IFPLK       P+    S   SE   RSKR +K T FG+DFY
Sbjct: 703  IERNTIVETKNAEFFEHIFPLKSSGTSEQPIDS-VSDTLSEDVRRSKRQRKETSFGNDFY 761

Query: 788  TFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EIVDLPPGFKTIGCKWIFKK 609
            T+LV  DP ++ EA ++ DA  W +AI +E+ESI  N+   +VDLP G K IGCKWIFKK
Sbjct: 762  TYLVENDPISFVEATSAPDAKHWDKAIKTELESIKKNNTWTLVDLPKGAKPIGCKWIFKK 821

Query: 608  KLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIRILVALAAVCKLFIHQMDV 429
            K  PDG+I+KYKARLVAKG+TQK NIDYFDTFAPV RISSIR+L+ALA++ KL IHQMDV
Sbjct: 822  KYHPDGSIEKYKARLVAKGFTQKHNIDYFDTFAPVTRISSIRVLLALASIHKLVIHQMDV 881

Query: 428  KTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQAPKQWHEKFDSVLISNGF 249
            KT FLNGELEEEIYM  PEGCV+ G K KVC+L+KSLYGLKQAPKQWHEK D+VL+  GF
Sbjct: 882  KTTFLNGELEEEIYMTQPEGCVVLGQKEKVCKLLKSLYGLKQAPKQWHEKLDNVLLCEGF 941

Query: 248  RINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
              ND++KC+Y ++ +   YVIICLYVDDMLIFG
Sbjct: 942  STNDADKCVYSRS-ENGEYVIICLYVDDMLIFG 973



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
 Frame = -1

Query: 172  LMICLFL------GTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEH 11
            ++ICL++      GT  +++ +TK+FL SK+ +KD+GE  VILGVKI +  D  +LSQE 
Sbjct: 960  VIICLYVDDMLIFGTCNDIVFKTKLFLGSKFEMKDMGEASVILGVKIIRKGDSILLSQEK 1019

Query: 10   YVE 2
            Y E
Sbjct: 1020 YTE 1022


>emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]
          Length = 1356

 Score =  314 bits (804), Expect(2) = 1e-94
 Identities = 158/291 (54%), Positives = 207/291 (71%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N I E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGIWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++P+AR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPIARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGKGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 1e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  314 bits (804), Expect(2) = 1e-94
 Identities = 158/291 (54%), Positives = 207/291 (71%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N I E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGIWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++P+AR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPIARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGKGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 1e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  314 bits (804), Expect(2) = 1e-94
 Identities = 158/291 (54%), Positives = 207/291 (71%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+ +     VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-YGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 1e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1320

 Score =  313 bits (803), Expect(2) = 1e-94
 Identities = 161/291 (55%), Positives = 209/291 (71%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLK---------KDIEKSL---PVQQDASPEN------SEI 843
            +   TIME+++A FFE+ FP+K          +I  SL   P Q + + E       SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSLITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 1e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  313 bits (803), Expect(2) = 1e-94
 Identities = 160/291 (54%), Positives = 207/291 (71%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPSEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEAI SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAICSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  LIS GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLISAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 1e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1297

 Score =  313 bits (803), Expect(2) = 1e-94
 Identities = 161/291 (55%), Positives = 209/291 (71%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLK---------KDIEKSL---PVQQDASPEN------SEI 843
            +   TIME+++A FFE+ FP+K          +I  SL   P Q + + E       SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSLITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 1e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1448

 Score =  319 bits (817), Expect(2) = 2e-94
 Identities = 161/291 (55%), Positives = 213/291 (73%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQ-DASPENSEIE----- 840
            + A TI+E+++A FFEN FP+K     S            P++  D +PE +  E     
Sbjct: 851  MHAGTILESRDATFFENEFPMKYTPSTSSKETVMPHEHFAPIEHNDQTPEENPEEDNIVD 910

Query: 839  -LRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              +SKR + A  FGDD+  +LV + P+T  EA +SLDA +WKEA+ SE++SI+SN   E+
Sbjct: 911  TRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYSSLDADYWKEAVRSEMDSIMSNGTWEV 970

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
            V+ P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 971  VERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 1030

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L+ALAA   L +HQMDVKTAFLNGELEEEIYMD P+G V+ G +  VC+L+KSLYGLKQ
Sbjct: 1031 VLLALAASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQ 1090

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD+ L S GF +N+++KC+YY+ +     VI+CLYV+D+LIFG
Sbjct: 1091 APKQWHEKFDTTLTSAGFVVNEADKCVYYR-YGGGEGVILCLYVNDILIFG 1140



 Score = 55.1 bits (131), Expect(2) = 2e-94
 Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITK-TRDGFILSQEHYVE 2
            L  GTSL VI E K +LS  + +KDLGE +VIL +K+ +   DG  L Q HYV+
Sbjct: 1137 LIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQREDEDGITLVQSHYVD 1190


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  313 bits (801), Expect(2) = 2e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 2e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  313 bits (801), Expect(2) = 2e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 2e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 764

 Score =  313 bits (801), Expect(2) = 2e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968 IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
           +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 130 MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 189

Query: 842 ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
             RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 190 PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASRDADYWKEAVRSEMDSIIANGTWEV 249

Query: 662 VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
            + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 250 TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 309

Query: 482 ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
           +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 310 VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 369

Query: 302 APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
           APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 370 APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 419



 Score = 60.8 bits (146), Expect(2) = 2e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160 LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
           L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 416 LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 468


>gb|AAT93940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1861

 Score =  312 bits (800), Expect(2) = 3e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 1120 MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 1179

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 1180 PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 1239

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 1240 TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 1299

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 1300 VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 1359

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 1360 APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 1409



 Score = 60.8 bits (146), Expect(2) = 3e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 1406 LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1458


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  312 bits (800), Expect(2) = 3e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 922  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 981

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 982  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 1041

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 1042 TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 1101

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 1102 VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 1161

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 1162 APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 1211



 Score = 60.8 bits (146), Expect(2) = 3e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 1208 LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1260


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  312 bits (800), Expect(2) = 3e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 795  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 854

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 855  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 914

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 915  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 974

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 975  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 1034

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 1035 APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 1084



 Score = 60.8 bits (146), Expect(2) = 3e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 1081 LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1133


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  312 bits (800), Expect(2) = 3e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 3e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  312 bits (800), Expect(2) = 3e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 3e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  312 bits (800), Expect(2) = 3e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTNSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 3e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  312 bits (800), Expect(2) = 3e-94
 Identities = 158/291 (54%), Positives = 206/291 (70%), Gaps = 18/291 (6%)
 Frame = -3

Query: 968  IEANTIMETKNADFFENIFPLKKDIEKS-----------LPVQQD-------ASPENSEI 843
            +   TIME+++A FFE+ FP+K     S            P +Q        +  + SE 
Sbjct: 706  MHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEA 765

Query: 842  ELRSKRTKKATCFGDDFYTFLVSEDPKTYHEAITSLDAPFWKEAINSEIESILSNHI*EI 663
              RSKR + A  FGDDF  +LV + PK+  EA  S DA +WKEA+ SE++SI++N   E+
Sbjct: 766  PRRSKRQRTAKSFGDDFTVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEV 825

Query: 662  VDLPPGFKTIGCKWIFKKKLIPDGAIDKYKARLVAKGYTQKENIDYFDTFAPVARISSIR 483
             + P G K +GCKW+FKKKL PDG I+KYKARLVAKGYTQKE  D+FDT++PVAR+++IR
Sbjct: 826  TERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIR 885

Query: 482  ILVALAAVCKLFIHQMDVKTAFLNGELEEEIYMD*PEGCVMPGSKHKVCRLVKSLYGLKQ 303
            +L++LAA   L +HQMDVKTAFLNGEL+EEIYMD P+G V+ G + KVC+L+KSLYGLKQ
Sbjct: 886  VLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQ 945

Query: 302  APKQWHEKFDSVLISNGFRINDSEKCIYYKTFDTNIYVIICLYVDDMLIFG 150
            APKQWHEKFD  L S GF +N+++KC+YY+       VI+CLYVDD+LIFG
Sbjct: 946  APKQWHEKFDKTLTSAGFAVNEADKCVYYR-HGGGEGVILCLYVDDILIFG 995



 Score = 60.8 bits (146), Expect(2) = 3e-94
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = -1

Query: 160  LFLGTSLEVINETKIFLSSKYNLKDLGEVEVILGVKITKTRDGFILSQEHYVE 2
            L  GT+LEVINE K FLS  +++KDLG  +VIL +K+ +  +G  L Q HYVE
Sbjct: 992  LIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVE 1044