BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00010861
         (2408 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...  1237   0.0  
ref|XP_007040301.1| Xeroderma pigmentosum complementation group ...  1228   0.0  
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So...  1214   0.0  
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So...  1214   0.0  
ref|XP_007210350.1| hypothetical protein PRUPE_ppa001762mg [Prun...  1207   0.0  
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu...  1203   0.0  
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]...  1197   0.0  
dbj|BAB08509.1| DNA excision repair cross-complementing protein;...  1197   0.0  
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido...  1197   0.0  
ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp....  1196   0.0  
ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu...  1196   0.0  
gb|EXB37318.1| DNA repair helicase [Morus notabilis]                 1196   0.0  
ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr...  1191   0.0  
ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, pa...  1191   0.0  
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...  1190   0.0  
ref|XP_006283168.1| hypothetical protein CARUB_v10004199mg [Caps...  1188   0.0  
ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Popu...  1187   0.0  
ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutr...  1185   0.0  
ref|XP_002299520.2| DNA repair protein and transcription factor ...  1184   0.0  
ref|XP_002870640.1| DNA repair and transcription factor XPB1 [Ar...  1184   0.0  

>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score = 1237 bits (3201), Expect = 0.0
 Identities = 622/746 (83%), Positives = 655/746 (87%), Gaps = 1/746 (0%)
 Frame = +3

Query: 48   MVTEEDTYYPQKFDEDNRDGEKE-EKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLY 224
            +V +ED YY ++F++D RDGEKE +KRDFTKLELK DHSNRPLWACADGRIFLETFSPLY
Sbjct: 25   VVEDEDAYYGEEFEDDYRDGEKEGKKRDFTKLELKVDHSNRPLWACADGRIFLETFSPLY 84

Query: 225  KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMI 404
            KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI++VL+KLSKTKLPKEMI
Sbjct: 85   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMI 144

Query: 405  DFIYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTIS 584
            DFI+ASTANYGKVKLVLKKNRYFVESPFPEVLK LLRD+VI+++RIS EGS G DGFTIS
Sbjct: 145  DFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRSRISHEGSTGNDGFTIS 204

Query: 585  KAIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDF 764
            K +GEIE  HD              KETHSFEVDP QVE VKQRCLPNALNYPMLEEYDF
Sbjct: 205  KTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNALNYPMLEEYDF 264

Query: 765  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRI 944
            RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI
Sbjct: 265  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 324

Query: 945  RKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFG 1124
            RKSCLCLATNAVSVDQWAFQFKLWSTIRD+QICRFTSDSKERFRGNAGVVVTTYNMVAFG
Sbjct: 325  RKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERFRGNAGVVVTTYNMVAFG 384

Query: 1125 GXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDER 1304
            G                 WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDER
Sbjct: 385  GKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDER 444

Query: 1305 ITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYV 1484
            ITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYV
Sbjct: 445  ITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYV 504

Query: 1485 MNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILE 1664
            MNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSHVERTKILE
Sbjct: 505  MNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILE 564

Query: 1665 AFKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRM 1844
            AFKT ++VNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDR+
Sbjct: 565  AFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRL 624

Query: 1845 AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRS 2024
            AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP DSG +LSYH   
Sbjct: 625  AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDSGADLSYHRLD 684

Query: 2025 DQLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRN 2204
            +QL LL KVL A D  VG E           QK             A+GMVYMEY+ GRN
Sbjct: 685  EQLALLGKVLSAGDDAVGLEQLDEDADDIALQKARRSVGSMSAMSGASGMVYMEYNTGRN 744

Query: 2205 SRPGQGKLKNKPKDQAKRHSLFKKRF 2282
               GQG++K KPKD +KRH LFK+RF
Sbjct: 745  KHGGQGQIKGKPKDPSKRHHLFKRRF 770


>ref|XP_007040301.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma
            cacao] gi|508777546|gb|EOY24802.1| Xeroderma pigmentosum
            complementation group B 1 isoform 1 [Theobroma cacao]
          Length = 771

 Score = 1228 bits (3176), Expect = 0.0
 Identities = 612/745 (82%), Positives = 657/745 (88%), Gaps = 1/745 (0%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGEKE-EKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYK 227
            V +E ++YP + D+ +RDGE E +KRDF+KLELKPDH+NRPLWACADGRIFLETFSPLYK
Sbjct: 26   VEDEYSFYPDEGDDASRDGENEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSPLYK 85

Query: 228  QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMID 407
            QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMID
Sbjct: 86   QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMID 145

Query: 408  FIYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISK 587
            FI+ASTANYGKVKLVLKKNRYF+ESPFPEVLKKLL+DDVIA+ARI+ E + G DGFTISK
Sbjct: 146  FIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISK 205

Query: 588  AIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFR 767
            A GEI +GHDG             KETH+FE+DP QVE VKQRCLPNALNYPMLEEYDFR
Sbjct: 206  AAGEIGTGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFR 265

Query: 768  NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIR 947
            NDTVNPDLDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+
Sbjct: 266  NDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIK 325

Query: 948  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 1127
            KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG
Sbjct: 326  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 385

Query: 1128 XXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERI 1307
                             WGLLLMDEVHVVPAHMFRKVIS+T+SHCKLGLTATLVREDERI
Sbjct: 386  KRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERI 445

Query: 1308 TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 1487
            TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM
Sbjct: 446  TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 505

Query: 1488 NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEA 1667
            NPNKFRACEFLIRFHE++RGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+ERTKIL+A
Sbjct: 506  NPNKFRACEFLIRFHERERGDKIIVFADNLFALTEYAMKLRKPMIYGATSHLERTKILQA 565

Query: 1668 FKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMA 1847
            FKTSR+VNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+L+DRMA
Sbjct: 566  FKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMA 625

Query: 1848 GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSD 2027
            GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D+G +LSY+   +
Sbjct: 626  GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGADLSYYHLDE 685

Query: 2028 QLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNS 2207
            QL LL KVL A D  VG E            K             ANGMVYMEYS G++ 
Sbjct: 686  QLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSTGSMSAMSGANGMVYMEYSTGKHK 745

Query: 2208 RPGQGKLKNKPKDQAKRHSLFKKRF 2282
             PGQG++K+KPKD +KRH LFK+R+
Sbjct: 746  YPGQGQIKSKPKDPSKRHYLFKRRY 770


>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
          Length = 768

 Score = 1214 bits (3142), Expect = 0.0
 Identities = 610/743 (82%), Positives = 644/743 (86%), Gaps = 1/743 (0%)
 Frame = +3

Query: 57   EEDTYYPQKFDEDNRDGEKEEKR-DFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQA 233
            ++D YYP++  +D  DGE+E K+ DFTKLELKPDH+NRPLWACADGRIFLETFSPLYKQA
Sbjct: 30   DDDQYYPEEGGDDFHDGEREGKKMDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQA 89

Query: 234  YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFI 413
            YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI++VL+KLSKTKLPKEMIDFI
Sbjct: 90   YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFI 149

Query: 414  YASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISKAI 593
            +ASTANYGKVKLVLKKNRYF+ESPFPEVLK+LL DD I KARIS EG  G DGFT+SK +
Sbjct: 150  HASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTVSKPV 209

Query: 594  GEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFRND 773
             EIE GHD              KETHSFE+DP QVE VKQRCLPNALNYPM+EEYDFRND
Sbjct: 210  NEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYDFRND 269

Query: 774  TVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKS 953
            TVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+KS
Sbjct: 270  TVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKS 329

Query: 954  CLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGXX 1133
            CLCLATNAVSVDQWAFQFKLWSTIR++QICRFTSDSKERFRGN GVVVTTYNMVAFGG  
Sbjct: 330  CLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNVGVVVTTYNMVAFGGKR 389

Query: 1134 XXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERITD 1313
                           WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDERITD
Sbjct: 390  SEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITD 449

Query: 1314 LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNP 1493
            LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKK+QALYVMNP
Sbjct: 450  LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNP 509

Query: 1494 NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEAFK 1673
            NKFRACEFLIRFHEQQRGDKIIVFADNLFAL EYA+KLR+PMIYGATSHVERTKILEAFK
Sbjct: 510  NKFRACEFLIRFHEQQRGDKIIVFADNLFALVEYAMKLRKPMIYGATSHVERTKILEAFK 569

Query: 1674 TSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAGG 1853
            TS+EVNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+ QDRMAGG
Sbjct: 570  TSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGG 629

Query: 1854 KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSDQL 2033
            KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP+DSG ELSYH   DQL
Sbjct: 630  KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPSDSGSELSYHRLDDQL 689

Query: 2034 DLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNSRP 2213
             LL KVL A D  VG E           QK             A GMVYMEY+ G+    
Sbjct: 690  QLLGKVLSAGDDAVGLEQLDEDADDVALQKARRYMGSMSAMSGAKGMVYMEYNTGK---- 745

Query: 2214 GQGKLKNKPKDQAKRHSLFKKRF 2282
             +G +KNKPKD  KRH LFKKRF
Sbjct: 746  -RGLIKNKPKDPTKRHQLFKKRF 767


>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
          Length = 768

 Score = 1214 bits (3142), Expect = 0.0
 Identities = 610/743 (82%), Positives = 645/743 (86%), Gaps = 1/743 (0%)
 Frame = +3

Query: 57   EEDTYYPQKFDEDNRDGEKEEKR-DFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQA 233
            ++D YYP++  +D  DGE+E K+ DFTKLELKPDH NRPLWACADGRIFLETFSPLYKQA
Sbjct: 30   DDDHYYPEEGGDDFHDGEREGKKMDFTKLELKPDHGNRPLWACADGRIFLETFSPLYKQA 89

Query: 234  YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFI 413
            YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI++VL+KLSKTKLPKEMIDFI
Sbjct: 90   YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFI 149

Query: 414  YASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISKAI 593
            +ASTANYGKVKLVLKKNRYF+ESPFPEVLK+LL DD I KARIS EG  G DGFT+SK +
Sbjct: 150  HASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTVSKPV 209

Query: 594  GEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFRND 773
             EIE GHD              KETHSFE+DP QVE VKQRCLPNALNYPM+EEYDFRND
Sbjct: 210  NEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYDFRND 269

Query: 774  TVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKS 953
            TVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+KS
Sbjct: 270  TVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKS 329

Query: 954  CLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGXX 1133
            CLCLATNAVSVDQWAFQFKLWSTIR++QICRFTSDSKERFRGN GVVVTTYNMVAFGG  
Sbjct: 330  CLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNVGVVVTTYNMVAFGGKR 389

Query: 1134 XXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERITD 1313
                           WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDERITD
Sbjct: 390  SEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITD 449

Query: 1314 LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNP 1493
            LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKK+QALYVMNP
Sbjct: 450  LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNP 509

Query: 1494 NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEAFK 1673
            NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSHVERTKILEAFK
Sbjct: 510  NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFK 569

Query: 1674 TSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAGG 1853
            TS+EVNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+ QDRMAGG
Sbjct: 570  TSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGG 629

Query: 1854 KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSDQL 2033
            KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP+DSG ELSYH   +QL
Sbjct: 630  KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPSDSGSELSYHRLDEQL 689

Query: 2034 DLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNSRP 2213
             LL KVL A D  VG E           QK             A GMVYMEY++G+    
Sbjct: 690  QLLGKVLSAGDDAVGLEQLDEDADDVALQKARRYVGSMSAMSGAKGMVYMEYNSGK---- 745

Query: 2214 GQGKLKNKPKDQAKRHSLFKKRF 2282
             +G +KNKPKD  KRH LFKKRF
Sbjct: 746  -KGLIKNKPKDPTKRHQLFKKRF 767


>ref|XP_007210350.1| hypothetical protein PRUPE_ppa001762mg [Prunus persica]
            gi|462406085|gb|EMJ11549.1| hypothetical protein
            PRUPE_ppa001762mg [Prunus persica]
          Length = 768

 Score = 1207 bits (3122), Expect = 0.0
 Identities = 614/745 (82%), Positives = 648/745 (86%), Gaps = 3/745 (0%)
 Frame = +3

Query: 57   EEDTYYP-QKFDEDNRDGEKEEKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQA 233
            +ED Y+  +  DED RDGE + KRDFTKLELKPDH NRPLWACADGRIFLETFSPLYKQA
Sbjct: 25   DEDAYFGGEDIDEDVRDGEGK-KRDFTKLELKPDHINRPLWACADGRIFLETFSPLYKQA 83

Query: 234  YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFI 413
            YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMIDFI
Sbjct: 84   YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFI 143

Query: 414  YASTANYGKVKLVLKKNRYFVESPFPE--VLKKLLRDDVIAKARISPEGSQGGDGFTISK 587
            + STANYGKVKLVLKKNRY VESPFPE  VLK LL+D+VI+K+RI  EGS+G DGFTISK
Sbjct: 144  HGSTANYGKVKLVLKKNRYLVESPFPEARVLKTLLKDEVISKSRIISEGSRGSDGFTISK 203

Query: 588  AIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFR 767
             +GEI +G                KETH+FEVDP QVE VK+RCLPNALNYPMLEEYDFR
Sbjct: 204  TMGEIGAGPSDLLNEAELAAAAEEKETHAFEVDPTQVENVKERCLPNALNYPMLEEYDFR 263

Query: 768  NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIR 947
            NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RIR
Sbjct: 264  NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIR 323

Query: 948  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 1127
            KSCLCLATNAVSVDQWAFQFKLWSTIRD+QICRFTSDSKERFRGNAGVVVTTYNMVAFGG
Sbjct: 324  KSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 383

Query: 1128 XXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERI 1307
                             WGLLLMDEVHVVPA MFRKVIS+T+SHCKLGLTATLVREDERI
Sbjct: 384  KRSEESEKIIEEIRNREWGLLLMDEVHVVPAQMFRKVISLTKSHCKLGLTATLVREDERI 443

Query: 1308 TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 1487
            TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFA+YLKKENSKKKQALYVM
Sbjct: 444  TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAQYLKKENSKKKQALYVM 503

Query: 1488 NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEA 1667
            NPNKFRACEFLIRFHEQQRGDKIIVFADNLFAL EYA+KLR+PMIYGATSHVERTKILEA
Sbjct: 504  NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALVEYAMKLRKPMIYGATSHVERTKILEA 563

Query: 1668 FKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMA 1847
            FKTSR+VNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+LQDRMA
Sbjct: 564  FKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMA 623

Query: 1848 GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSD 2027
            GGKEEYNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFKVIT LPP DSGPEL+YHS  D
Sbjct: 624  GGKEEYNAFFYSLVSMDTQEMYYSTKRQQFLIDQGYSFKVITGLPPPDSGPELNYHSLDD 683

Query: 2028 QLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNS 2207
            QL LL KVL A D+ VG E            K             ANGMVYMEYS GR+ 
Sbjct: 684  QLALLTKVLSAGDEAVGLEQLEEDADDIALHKARRFGGSMSAMSGANGMVYMEYSTGRH- 742

Query: 2208 RPGQGKLKNKPKDQAKRHSLFKKRF 2282
            + G+G++K+KPKD AKRH LFK+RF
Sbjct: 743  KLGKGQMKSKPKDPAKRHHLFKRRF 767


>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
          Length = 768

 Score = 1203 bits (3112), Expect = 0.0
 Identities = 609/743 (81%), Positives = 644/743 (86%), Gaps = 1/743 (0%)
 Frame = +3

Query: 57   EEDTYYPQKFDEDNRDGEKEE-KRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQA 233
            ++D Y+    D+D+R G+KE  KRDF+KLELKPDH+NRPLWACADGRIFLETFSPLYKQA
Sbjct: 27   DDDVYHLDDPDDDDRYGDKEGGKRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQA 86

Query: 234  YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFI 413
            YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI++VL+KLSK KLPKEMIDFI
Sbjct: 87   YDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFI 146

Query: 414  YASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISKAI 593
            YAST NYGKVKLVLKKNRY VESPFPEVL+KLL+D+VI +AR+  E S  G+ FT+SK  
Sbjct: 147  YASTTNYGKVKLVLKKNRYLVESPFPEVLQKLLKDEVIGRARVVHEDSGNGE-FTVSKTA 205

Query: 594  GEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFRND 773
            GE+ S H+G             +ETHSFE+DP+QVE VKQRCLPNALNYPMLEEYDFRND
Sbjct: 206  GELGSRHEGLLNEAEAAAAAEERETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRND 265

Query: 774  TVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKS 953
            T+NPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RIRKS
Sbjct: 266  TINPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIRKS 325

Query: 954  CLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGXX 1133
            CLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG  
Sbjct: 326  CLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKR 385

Query: 1134 XXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERITD 1313
                           WGLLLMDEVHVVPAHMFRKVIS+T+SHCKLGLTATLVREDERITD
Sbjct: 386  SEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITD 445

Query: 1314 LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNP 1493
            LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNP
Sbjct: 446  LNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNP 505

Query: 1494 NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEAFK 1673
            NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+ERTKILEAFK
Sbjct: 506  NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFK 565

Query: 1674 TSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAGG 1853
            TSR+VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+ QDRMAGG
Sbjct: 566  TSRDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGG 625

Query: 1854 KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSDQL 2033
            KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D+G ELSYH   DQL
Sbjct: 626  KEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGAELSYHRLDDQL 685

Query: 2034 DLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNSRP 2213
             LL KVL A D  VG E                          ANGMVYMEYS GR    
Sbjct: 686  ALLGKVLNAGDDMVGLEQLEDDADQIALDAARRSKGSMSAMSGANGMVYMEYSTGR-KLA 744

Query: 2214 GQGKLKNKPKDQAKRHSLFKKRF 2282
            GQG+LK+KPKD AKRH LFKKRF
Sbjct: 745  GQGQLKSKPKDPAKRHHLFKKRF 767


>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
            gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
            repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
            AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog
            1; Short=AtXPB1; AltName: Full=XPB homolog 1
            gi|11771735|gb|AAC49987.2| putative DNA repair protein
            and transcription factor [Arabidopsis thaliana]
            gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
            thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
            [Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
            repair helicase XPB1 [Arabidopsis thaliana]
          Length = 767

 Score = 1197 bits (3098), Expect = 0.0
 Identities = 605/745 (81%), Positives = 640/745 (85%), Gaps = 1/745 (0%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGEKEEK-RDFTKLELKPDHSNRPLWACADGRIFLETFSPLYK 227
            +   + YY    DED+RDGE EEK RDFTKLELKPDH NRPLWACADGRIFLETFSPLYK
Sbjct: 26   IQNAEDYYDDA-DEDSRDGEGEEKKRDFTKLELKPDHGNRPLWACADGRIFLETFSPLYK 84

Query: 228  QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMID 407
            QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMI+
Sbjct: 85   QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIE 144

Query: 408  FIYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISK 587
            FI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK+LL DDVI +AR S E   GGDGF++ +
Sbjct: 145  FIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFSVGR 204

Query: 588  AIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFR 767
              GE+E+G                KETHSFE+DP QVE VKQRCLPNALNYPMLEEYDFR
Sbjct: 205  TCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFR 264

Query: 768  NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIR 947
            ND VNPDLDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+
Sbjct: 265  NDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIK 324

Query: 948  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 1127
            KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG
Sbjct: 325  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 384

Query: 1128 XXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERI 1307
                             WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDERI
Sbjct: 385  KRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERI 444

Query: 1308 TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 1487
            TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM
Sbjct: 445  TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 504

Query: 1488 NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEA 1667
            NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+ERTKILEA
Sbjct: 505  NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEA 564

Query: 1668 FKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMA 1847
            FKTS++VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+L+DRMA
Sbjct: 565  FKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMA 624

Query: 1848 GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSD 2027
            GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D+G  LSYHS+ +
Sbjct: 625  GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEE 684

Query: 2028 QLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNS 2207
            QL LL KV+ A D  VG E           QK             + GMVYMEY++GR+ 
Sbjct: 685  QLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSVMSGSKGMVYMEYNSGRHK 744

Query: 2208 RPGQGKLKNKPKDQAKRHSLFKKRF 2282
                G+   KPKD  KRH+LFKKR+
Sbjct: 745  ---SGQQFKKPKDPTKRHNLFKKRY 766


>dbj|BAB08509.1| DNA excision repair cross-complementing protein; similar to human
            Xeroderma pigmentosum group B DNA repair protein
            [Arabidopsis thaliana]
          Length = 755

 Score = 1197 bits (3098), Expect = 0.0
 Identities = 605/745 (81%), Positives = 640/745 (85%), Gaps = 1/745 (0%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGEKEEK-RDFTKLELKPDHSNRPLWACADGRIFLETFSPLYK 227
            +   + YY    DED+RDGE EEK RDFTKLELKPDH NRPLWACADGRIFLETFSPLYK
Sbjct: 14   IQNAEDYYDDA-DEDSRDGEGEEKKRDFTKLELKPDHGNRPLWACADGRIFLETFSPLYK 72

Query: 228  QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMID 407
            QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMI+
Sbjct: 73   QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIE 132

Query: 408  FIYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISK 587
            FI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK+LL DDVI +AR S E   GGDGF++ +
Sbjct: 133  FIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFSVGR 192

Query: 588  AIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFR 767
              GE+E+G                KETHSFE+DP QVE VKQRCLPNALNYPMLEEYDFR
Sbjct: 193  TCGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFR 252

Query: 768  NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIR 947
            ND VNPDLDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+
Sbjct: 253  NDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIK 312

Query: 948  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 1127
            KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG
Sbjct: 313  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 372

Query: 1128 XXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERI 1307
                             WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDERI
Sbjct: 373  KRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERI 432

Query: 1308 TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 1487
            TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM
Sbjct: 433  TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 492

Query: 1488 NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEA 1667
            NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+ERTKILEA
Sbjct: 493  NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEA 552

Query: 1668 FKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMA 1847
            FKTS++VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+L+DRMA
Sbjct: 553  FKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMA 612

Query: 1848 GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSD 2027
            GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D+G  LSYHS+ +
Sbjct: 613  GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEE 672

Query: 2028 QLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNS 2207
            QL LL KV+ A D  VG E           QK             + GMVYMEY++GR+ 
Sbjct: 673  QLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSVMSGSKGMVYMEYNSGRHK 732

Query: 2208 RPGQGKLKNKPKDQAKRHSLFKKRF 2282
                G+   KPKD  KRH+LFKKR+
Sbjct: 733  ---SGQQFKKPKDPTKRHNLFKKRY 754


>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
          Length = 767

 Score = 1197 bits (3097), Expect = 0.0
 Identities = 605/745 (81%), Positives = 640/745 (85%), Gaps = 1/745 (0%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGEKEEK-RDFTKLELKPDHSNRPLWACADGRIFLETFSPLYK 227
            +   + YY    DED+RDGE EEK RDFTKLELKPDH NRPLWACADGRIFLETFSPLYK
Sbjct: 26   IQNAEDYYDDA-DEDSRDGEGEEKKRDFTKLELKPDHGNRPLWACADGRIFLETFSPLYK 84

Query: 228  QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMID 407
            QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMI+
Sbjct: 85   QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIE 144

Query: 408  FIYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISK 587
            FI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK+LL DDVI +AR S E   GGDGF++ +
Sbjct: 145  FIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFSVGR 204

Query: 588  AIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFR 767
              GE+E+G                KETHSFE+DP QVE VKQRCLPNALNYPMLEEYDFR
Sbjct: 205  TSGELEAGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFR 264

Query: 768  NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIR 947
            ND VNPDLDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+
Sbjct: 265  NDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIK 324

Query: 948  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 1127
            KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG
Sbjct: 325  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 384

Query: 1128 XXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERI 1307
                             WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDERI
Sbjct: 385  KRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERI 444

Query: 1308 TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 1487
            TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM
Sbjct: 445  TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 504

Query: 1488 NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEA 1667
            NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+ERTKILEA
Sbjct: 505  NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEA 564

Query: 1668 FKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMA 1847
            FKTS++VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+L+DRMA
Sbjct: 565  FKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMA 624

Query: 1848 GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSD 2027
            GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D+G  LSYHS+ +
Sbjct: 625  GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEE 684

Query: 2028 QLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNS 2207
            QL LL KV+ A D  VG E           QK             + GMVYMEY++GR+ 
Sbjct: 685  QLSLLGKVMNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSVMSGSKGMVYMEYNSGRHK 744

Query: 2208 RPGQGKLKNKPKDQAKRHSLFKKRF 2282
                G+   KPKD  KRH+LFKKR+
Sbjct: 745  ---SGQQFKKPKDPTKRHNLFKKRY 766


>ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316475|gb|EFH46898.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 779

 Score = 1196 bits (3095), Expect = 0.0
 Identities = 608/753 (80%), Positives = 641/753 (85%), Gaps = 9/753 (1%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGE---------KEEKRDFTKLELKPDHSNRPLWACADGRIFL 203
            +   + YY +  DED+RDGE         +E+KRDFTKLELKPDH NRPLWACADGRIFL
Sbjct: 30   IQNAEDYYDED-DEDSRDGELTLSLYGEGEEKKRDFTKLELKPDHVNRPLWACADGRIFL 88

Query: 204  ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKT 383
            ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKT
Sbjct: 89   ETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKT 148

Query: 384  KLPKEMIDFIYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQG 563
            KLPKEMI+FI+ASTANYGKVKLVLKKNRYF+ESPFPEVLK+LL DDVI +AR S E   G
Sbjct: 149  KLPKEMIEFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYG 208

Query: 564  GDGFTISKAIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYP 743
            GDGFTI K  GE+E+G                KETHSFE+DP QVE VKQRCLPNALNYP
Sbjct: 209  GDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYP 268

Query: 744  MLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 923
            MLEEYDFRND VNPDLDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG
Sbjct: 269  MLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 328

Query: 924  VSAATRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTT 1103
            VSAA RI+KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTT
Sbjct: 329  VSAAARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTT 388

Query: 1104 YNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTAT 1283
            YNMVAF G                 WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTAT
Sbjct: 389  YNMVAFSGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTAT 448

Query: 1284 LVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSK 1463
            LVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSK
Sbjct: 449  LVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSK 508

Query: 1464 KKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHV 1643
            KKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+
Sbjct: 509  KKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHI 568

Query: 1644 ERTKILEAFKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAK 1823
            ERTKILEAFKTS++VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAK
Sbjct: 569  ERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAK 628

Query: 1824 GRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPE 2003
            G+L+DRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D+G  
Sbjct: 629  GKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSS 688

Query: 2004 LSYHSRSDQLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYM 2183
            LSYHS+ +QL LL KVL A D  VG E           QK             A GMVYM
Sbjct: 689  LSYHSQEEQLSLLGKVLNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSLMSGAKGMVYM 748

Query: 2184 EYSNGRNSRPGQGKLKNKPKDQAKRHSLFKKRF 2282
            EY++GR+     G+   KPKD  KRH+LFKKR+
Sbjct: 749  EYNSGRHK---SGQQFKKPKDPTKRHNLFKKRY 778


>ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
            gi|550346909|gb|ERP65333.1| hypothetical protein
            POPTR_0001s09670g [Populus trichocarpa]
          Length = 783

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 611/759 (80%), Positives = 643/759 (84%), Gaps = 15/759 (1%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGEKE-EKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYK 227
            V E+D +YP++  +D RDGE E +KRDF+KLELKPDH+NRPLWACADGRIFLETFS LYK
Sbjct: 26   VAEDDAFYPEEAGDDFRDGETEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSSLYK 85

Query: 228  QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMID 407
            QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMID
Sbjct: 86   QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMID 145

Query: 408  FIYASTANYGKVKLVLKKNRYFVESPFPE--------------VLKKLLRDDVIAKARIS 545
            FI+ STANYGKVKLVLKKNRYF+ESPF E              VLKKLL+D+VIAKARI 
Sbjct: 146  FIHGSTANYGKVKLVLKKNRYFIESPFTEASWFFVSGFPPLSLVLKKLLKDEVIAKARIQ 205

Query: 546  PEGSQGGDGFTISKAIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLP 725
            PE S G +GFTISKA GEI + HDG             KETHSFEVDP+QVE VKQRCLP
Sbjct: 206  PESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLP 265

Query: 726  NALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGA 905
            NALNYPMLEEYDFRNDTVNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGA
Sbjct: 266  NALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGA 325

Query: 906  GKSLVGVSAATRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNA 1085
            GKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQF LWS I  DQICRFTSDSKERF+GNA
Sbjct: 326  GKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSLWSDISQDQICRFTSDSKERFKGNA 385

Query: 1086 GVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCK 1265
            GVVVTTYNMVAFGG                 WGLLLMDEVHVVPAHMFRKVISIT+SHCK
Sbjct: 386  GVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCK 445

Query: 1266 LGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL 1445
            LGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL
Sbjct: 446  LGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL 505

Query: 1446 KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIY 1625
            KKENSKKKQALYVMNPNKFRACEFLIRFHE+QR DKIIVFADNLFALTEYA+KL +PMIY
Sbjct: 506  KKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALTEYAMKLHKPMIY 565

Query: 1626 GATSHVERTKILEAFKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 1805
            GATSH ERTKIL AFKTS EVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG
Sbjct: 566  GATSHAERTKILHAFKTSSEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 625

Query: 1806 RILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 1985
            RILRAKG+LQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP
Sbjct: 626  RILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 685

Query: 1986 TDSGPELSYHSRSDQLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXA 2165
             DSG +LSY+S  DQL LL KVL A D  VG E            K             A
Sbjct: 686  ADSGADLSYNSLDDQLGLLAKVLSAGDDAVGLEQLDEDADDIALHKARRYMGSMSAMSGA 745

Query: 2166 NGMVYMEYSNGRNSRPGQGKLKNKPKDQAKRHSLFKKRF 2282
            NGMVYMEYS G+  + G+G++K KPKD AKRH LFK+RF
Sbjct: 746  NGMVYMEYSTGQ--KGGKGQIKGKPKDPAKRHYLFKRRF 782


>gb|EXB37318.1| DNA repair helicase [Morus notabilis]
          Length = 787

 Score = 1196 bits (3093), Expect = 0.0
 Identities = 611/762 (80%), Positives = 648/762 (85%), Gaps = 20/762 (2%)
 Frame = +3

Query: 57   EEDTYYPQKFDEDNRDGEKEEKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQAY 236
            +ED Y+  + D+D R GE + KRDF+KLELKPDH+NRPLWACADGRIFLETFSPLYKQAY
Sbjct: 29   DEDAYFGDEIDDDFRYGEGK-KRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAY 87

Query: 237  DFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFIY 416
            DFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMIDFI+
Sbjct: 88   DFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIH 147

Query: 417  ASTANYGKVKLVLKKNRYFVESPFPE-----VLKKLLRDDVIAKARISPEGSQGGDGFTI 581
             STANYGKVKLVLKKNRYF+ESPFPE     VLK+LL+D+VI++ARI+ EGS G DGFTI
Sbjct: 148  GSTANYGKVKLVLKKNRYFIESPFPEARFCSVLKRLLKDEVISRARITSEGSHGNDGFTI 207

Query: 582  SKAIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQ---------------VELVKQR 716
            SK +GE+ +G D              KETHSFE+DP+Q               VE VKQR
Sbjct: 208  SKTMGEMGNGPDSLLNEAELAAAAEEKETHSFEIDPSQALSQKVRNRTSSCQQVENVKQR 267

Query: 717  CLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLP 896
            CLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLP
Sbjct: 268  CLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLP 327

Query: 897  CGAGKSLVGVSAATRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFR 1076
            CGAGKSLVGVSAA+RI+KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFR
Sbjct: 328  CGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFR 387

Query: 1077 GNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRS 1256
            GNAGVVVTTYNMVAFGG                 WGLLLMDEVHVVPAHMFRKVIS+T+S
Sbjct: 388  GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKS 447

Query: 1257 HCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFA 1436
            HCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFA
Sbjct: 448  HCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFA 507

Query: 1437 EYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRP 1616
            EYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+P
Sbjct: 508  EYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKP 567

Query: 1617 MIYGATSHVERTKILEAFKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQ 1796
            MIYGATSHVERTKILEAFKTSR+VNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQ
Sbjct: 568  MIYGATSHVERTKILEAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQ 627

Query: 1797 RLGRILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS 1976
            RLGRILRAKG+LQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS
Sbjct: 628  RLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS 687

Query: 1977 LPPTDSGPELSYHSRSDQLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXX 2156
            LPP DS  ELSYH   +QL LL+KVL A D  VG E            K           
Sbjct: 688  LPPPDSEAELSYHRLEEQLILLSKVLSAGDDAVGLEQLEEDADDIALHKARRSLGSMSAM 747

Query: 2157 XXANGMVYMEYSNGRNSRPGQGKLKNKPKDQAKRHSLFKKRF 2282
              ANGMVYMEYS G+    GQ   K+KP+D AKRH LFK+R+
Sbjct: 748  SGANGMVYMEYSTGKGKLIGQ---KSKPRDPAKRHYLFKRRY 786


>ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
            vesca]
          Length = 768

 Score = 1191 bits (3082), Expect = 0.0
 Identities = 602/735 (81%), Positives = 639/735 (86%)
 Frame = +3

Query: 78   QKFDEDNRDGEKEEKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIA 257
            ++ D+D R   + +KRDFTKLELKPDH NRPLWACADGRIFLETFS LYKQAYDFLIAIA
Sbjct: 34   EELDDDVRGDGEVKKRDFTKLELKPDHLNRPLWACADGRIFLETFSALYKQAYDFLIAIA 93

Query: 258  EPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFIYASTANYG 437
            EPVCRPESMHEYNLTPHSLYAAVSVGLET+TI+SVL+KLSKTKLPKEMIDFI+ STANYG
Sbjct: 94   EPVCRPESMHEYNLTPHSLYAAVSVGLETQTIISVLDKLSKTKLPKEMIDFIHGSTANYG 153

Query: 438  KVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISKAIGEIESGHD 617
            KVKLVLKKNRY+VESPFPEVLKKLLRDDVI+KARI  E +    GFTISK +GEI +   
Sbjct: 154  KVKLVLKKNRYYVESPFPEVLKKLLRDDVISKARIVSEAANEKGGFTISKTLGEIAADSS 213

Query: 618  GXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFRNDTVNPDLDM 797
            G             KETH+FE+DP+QVE VK+RCLPNALNYPMLEEYDFRNDTVNPDLDM
Sbjct: 214  GLLNEAELAAAAEEKETHAFEIDPSQVEKVKERCLPNALNYPMLEEYDFRNDTVNPDLDM 273

Query: 798  ELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLCLATNA 977
            ELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+KSCLCLATNA
Sbjct: 274  ELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNA 333

Query: 978  VSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXX 1157
            VSVDQWAFQFKLWSTIRD+ ICRFTSDSKERFRGNAGVVVTTYNMVAFGG          
Sbjct: 334  VSVDQWAFQFKLWSTIRDEHICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKII 393

Query: 1158 XXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERITDLNFLIGPK 1337
                   WGLLLMDEVHVVPA MFRKVI+IT+SHCKLGLTATLVREDERITDLNFLIGPK
Sbjct: 394  EEIRNREWGLLLMDEVHVVPAQMFRKVIAITKSHCKLGLTATLVREDERITDLNFLIGPK 453

Query: 1338 LYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEF 1517
            LYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEF
Sbjct: 454  LYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEF 513

Query: 1518 LIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEAFKTSREVNTV 1697
            LIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSHVERTKILEAFKTS++VNTV
Sbjct: 514  LIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILEAFKTSKDVNTV 573

Query: 1698 FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAGGKEEYNAFF 1877
            FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+L+DRMAGGKEEYNAFF
Sbjct: 574  FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLRDRMAGGKEEYNAFF 633

Query: 1878 YSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSDQLDLLNKVLR 2057
            YSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP DSG +LSYH   +QL LL+KVL 
Sbjct: 634  YSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGADLSYHRLDEQLQLLSKVLT 693

Query: 2058 AADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNSRPGQGKLKNK 2237
            A D  VG E            K             A+G VYMEYS G+N R G+G+LK+K
Sbjct: 694  AGDDAVGLEQLDEDIDDIALLKSRRFSGSMSAMSGADGRVYMEYSTGKN-RNGKGQLKSK 752

Query: 2238 PKDQAKRHSLFKKRF 2282
            PKD AKRH LFKKRF
Sbjct: 753  PKDPAKRHHLFKKRF 767


>ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
          Length = 725

 Score = 1191 bits (3080), Expect = 0.0
 Identities = 601/721 (83%), Positives = 630/721 (87%)
 Frame = +3

Query: 120  KRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNL 299
            KRDF+KLELKPDH+NRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNL
Sbjct: 6    KRDFSKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNL 65

Query: 300  TPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFIYASTANYGKVKLVLKKNRYFVE 479
            TPHSLYAAVSVGLETETI++VL+KLSK KLPKEMIDFIYAST NYGKVKLVLKKNRY VE
Sbjct: 66   TPHSLYAAVSVGLETETIIAVLSKLSKAKLPKEMIDFIYASTTNYGKVKLVLKKNRYLVE 125

Query: 480  SPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISKAIGEIESGHDGXXXXXXXXXXXXX 659
            SPFPEVL+KLL+D+VI +AR+  E S  G+ FT+SK  GE+ S H+G             
Sbjct: 126  SPFPEVLQKLLKDEVIGRARVVHEDSGNGE-FTVSKTAGELGSRHEGLLNEAEAAAAAEE 184

Query: 660  KETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEK 839
            +ETHSFE+DP+QVE VKQRCLPNALNYPMLEEYDFRNDT+NPDLDMELKPQAQPRPYQEK
Sbjct: 185  RETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTINPDLDMELKPQAQPRPYQEK 244

Query: 840  SLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLCLATNAVSVDQWAFQFKLWS 1019
            SLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RIRKSCLCLATNAVSVDQWAFQFKLWS
Sbjct: 245  SLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIRKSCLCLATNAVSVDQWAFQFKLWS 304

Query: 1020 TIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMD 1199
            TIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG                 WGLLLMD
Sbjct: 305  TIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMD 364

Query: 1200 EVHVVPAHMFRKVISITRSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGF 1379
            EVHVVPAHMFRKVIS+T+SHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGF
Sbjct: 365  EVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGF 424

Query: 1380 IANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKII 1559
            IANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKII
Sbjct: 425  IANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKII 484

Query: 1560 VFADNLFALTEYALKLRRPMIYGATSHVERTKILEAFKTSREVNTVFLSKVGDNSIDIPE 1739
            VFADNLFALTEYA+KLR+PMIYGATSH+ERTKILEAFKTSR+VNTVFLSKVGDNSIDIPE
Sbjct: 485  VFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSRDVNTVFLSKVGDNSIDIPE 544

Query: 1740 ANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQEMYYS 1919
            ANVIIQISSHAGSRRQEAQRLGRILRAKG+ QDRMAGGKEEYNAFFYSLVSTDTQEMYYS
Sbjct: 545  ANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYS 604

Query: 1920 TKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSDQLDLLNKVLRAADKEVGEEXXXXX 2099
            TKRQQFLIDQGYSFKVITSLPP D+G ELSYH   DQL LL KVL A D  VG E     
Sbjct: 605  TKRQQFLIDQGYSFKVITSLPPADAGAELSYHRLDDQLALLGKVLNAGDDMVGLEQLEDD 664

Query: 2100 XXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNSRPGQGKLKNKPKDQAKRHSLFKKR 2279
                                 ANGMVYMEYS GR    GQG+LK+KPKD AKRH LFKKR
Sbjct: 665  ADQIALDAARRSKGSMSAMSGANGMVYMEYSTGR-KLAGQGQLKSKPKDPAKRHHLFKKR 723

Query: 2280 F 2282
            F
Sbjct: 724  F 724


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score = 1190 bits (3079), Expect = 0.0
 Identities = 599/745 (80%), Positives = 640/745 (85%)
 Frame = +3

Query: 48   MVTEEDTYYPQKFDEDNRDGEKEEKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYK 227
            ++ +ED Y  +  ++D  D  + +K+DF+KLELK DH+NRPLWACADGRIFLETFSPLYK
Sbjct: 24   IMEDEDVYCGEDMEDDRPDDGEGKKKDFSKLELKLDHANRPLWACADGRIFLETFSPLYK 83

Query: 228  QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMID 407
            QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMID
Sbjct: 84   QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMID 143

Query: 408  FIYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISK 587
            FI+ STANYGKVKLVLKKNRY VESPFPEVLK+LL+D+VI++AR+  E    G  FTISK
Sbjct: 144  FIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKDEVISRARLVSEAHVNGS-FTISK 202

Query: 588  AIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFR 767
              GEI + HDG             KETHSFEVDP+QVE VKQRCLPNALNYPMLEEYDFR
Sbjct: 203  TAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFR 262

Query: 768  NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIR 947
            NDTVNPDLDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+
Sbjct: 263  NDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIK 322

Query: 948  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 1127
            KSCLCLATNAVSVDQWAFQF+LWSTIR++QICRFTSDSKERF+GNAGVVVTTYNMVAFGG
Sbjct: 323  KSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSDSKERFQGNAGVVVTTYNMVAFGG 382

Query: 1128 XXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERI 1307
                             WGLLLMDEVHVVPAHMFRKVIS+T+SHCKLGLTATLVREDERI
Sbjct: 383  KRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERI 442

Query: 1308 TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 1487
            TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM
Sbjct: 443  TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 502

Query: 1488 NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEA 1667
            NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH ERTKIL+A
Sbjct: 503  NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHAERTKILQA 562

Query: 1668 FKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMA 1847
            FKTS++VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+ QDRMA
Sbjct: 563  FKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMA 622

Query: 1848 GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSD 2027
            GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP DSGP+LSY+   +
Sbjct: 623  GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPLDSGPDLSYYHLDE 682

Query: 2028 QLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNS 2207
            QL LL KVL A D  VG E            K             A GMVYMEYS GRN 
Sbjct: 683  QLALLAKVLNAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGAKGMVYMEYSTGRNK 742

Query: 2208 RPGQGKLKNKPKDQAKRHSLFKKRF 2282
              GQG +K+KPKD AKRH LFK+R+
Sbjct: 743  LAGQGHIKSKPKDPAKRHYLFKRRY 767


>ref|XP_006283168.1| hypothetical protein CARUB_v10004199mg [Capsella rubella]
            gi|482551873|gb|EOA16066.1| hypothetical protein
            CARUB_v10004199mg [Capsella rubella]
          Length = 768

 Score = 1188 bits (3073), Expect = 0.0
 Identities = 603/741 (81%), Positives = 630/741 (85%), Gaps = 1/741 (0%)
 Frame = +3

Query: 63   DTYYPQKFDEDNRDGEKEE-KRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQAYD 239
            + YY    D+D+RDGE EE KRDFTKL LKPDH NRPLWAC DGRIFLETFSPLYKQAYD
Sbjct: 30   EDYYDDADDQDSRDGEGEERKRDFTKLVLKPDHGNRPLWACGDGRIFLETFSPLYKQAYD 89

Query: 240  FLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFIYA 419
            FLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMIDFI+A
Sbjct: 90   FLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHA 149

Query: 420  STANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISKAIGE 599
            STANYGKVKLVLKKNRYF+ESPFPEVLK+LL D+ I +AR S E   GGD FTI K  GE
Sbjct: 150  STANYGKVKLVLKKNRYFIESPFPEVLKRLLSDEDINRARFSSEPCYGGDEFTIGKTSGE 209

Query: 600  IESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFRNDTV 779
            IE G                KETHSFE+DP+QVE+VKQRCLPNALNYPMLEEYDFRND V
Sbjct: 210  IEPGPGELLSEAELAAAAEEKETHSFEIDPSQVEIVKQRCLPNALNYPMLEEYDFRNDNV 269

Query: 780  NPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCL 959
            NPDLDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCL
Sbjct: 270  NPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCL 329

Query: 960  CLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGXXXX 1139
            CLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNA VVVTTYNMVAF G    
Sbjct: 330  CLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNACVVVTTYNMVAFTGKRSA 389

Query: 1140 XXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERITDLN 1319
                         WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDERITDLN
Sbjct: 390  EAEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLN 449

Query: 1320 FLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNK 1499
            FLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKK QALYVMNPNK
Sbjct: 450  FLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKNQALYVMNPNK 509

Query: 1500 FRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEAFKTS 1679
            FRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+ERTKILEAFK S
Sbjct: 510  FRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKIS 569

Query: 1680 REVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAGGKE 1859
            + VNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+L+DRMAGGKE
Sbjct: 570  KNVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKE 629

Query: 1860 EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSDQLDL 2039
            EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT LPP D+G  LSYHS+ +QL L
Sbjct: 630  EYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITGLPPPDAGSSLSYHSQEEQLSL 689

Query: 2040 LNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNSRPGQ 2219
            L KVL A D  VG E           QK             A GM YMEY++GR+     
Sbjct: 690  LGKVLNAGDDLVGLEHLEEDTDGMALQKARRSIGSMSAMSGAKGMAYMEYNSGRSK---S 746

Query: 2220 GKLKNKPKDQAKRHSLFKKRF 2282
            GK  NKPKD  KRH+LFKKRF
Sbjct: 747  GKQFNKPKDPTKRHNLFKKRF 767


>ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
            gi|550346907|gb|ERP65332.1| hypothetical protein
            POPTR_0001s09670g [Populus trichocarpa]
          Length = 786

 Score = 1187 bits (3072), Expect = 0.0
 Identities = 609/764 (79%), Positives = 640/764 (83%), Gaps = 20/764 (2%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGEKEEKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQ 230
            V E+D +YP++  +D RD  K  KRDF+KLELKPDH+NRPLWACADGRIFLETFS LYKQ
Sbjct: 26   VAEDDAFYPEEAGDDFRDEGK--KRDFSKLELKPDHANRPLWACADGRIFLETFSSLYKQ 83

Query: 231  AYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDF 410
            AYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMIDF
Sbjct: 84   AYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDF 143

Query: 411  IYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISKA 590
            I+ STANYGKVKLVLKKNRYF+ESPF EVLKKLL+D+VIAKARI PE S G +GFTISKA
Sbjct: 144  IHGSTANYGKVKLVLKKNRYFIESPFTEVLKKLLKDEVIAKARIQPESSHGTEGFTISKA 203

Query: 591  IGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFRN 770
             GEI + HDG             KETHSFEVDP+QVE VKQRCLPNALNYPMLEEYDFRN
Sbjct: 204  AGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRN 263

Query: 771  DTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRK 950
            DTVNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+K
Sbjct: 264  DTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKK 323

Query: 951  SCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGX 1130
            SCLCLATNAVSVDQWAFQF LWS I  DQICRFTSDSKERF+GNAGVVVTTYNMVAFGG 
Sbjct: 324  SCLCLATNAVSVDQWAFQFSLWSDISQDQICRFTSDSKERFKGNAGVVVTTYNMVAFGGK 383

Query: 1131 XXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERIT 1310
                            WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDERIT
Sbjct: 384  RSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERIT 443

Query: 1311 DLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMN 1490
            DLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMN
Sbjct: 444  DLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMN 503

Query: 1491 PNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEAF 1670
            PNKFRACEFLIRFHE+QR DKIIVFADNLFALTEYA+KL +PMIYGATSH ERTKIL AF
Sbjct: 504  PNKFRACEFLIRFHEEQRRDKIIVFADNLFALTEYAMKLHKPMIYGATSHAERTKILHAF 563

Query: 1671 KTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAG 1850
            KTS EVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+LQDRMAG
Sbjct: 564  KTSSEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAG 623

Query: 1851 GKEEYNAFFYSLVSTDTQ--------------------EMYYSTKRQQFLIDQGYSFKVI 1970
            GKEEYNAFFYSLVSTDTQ                    EMYYSTKRQQFLIDQGYSFKVI
Sbjct: 624  GKEEYNAFFYSLVSTDTQMIDADSSWRSISYLRCFFFLEMYYSTKRQQFLIDQGYSFKVI 683

Query: 1971 TSLPPTDSGPELSYHSRSDQLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXX 2150
            TSLPP DSG +LSY+S  DQL LL KVL A D  VG E            K         
Sbjct: 684  TSLPPADSGADLSYNSLDDQLGLLAKVLSAGDDAVGLEQLDEDADDIALHKARRYMGSMS 743

Query: 2151 XXXXANGMVYMEYSNGRNSRPGQGKLKNKPKDQAKRHSLFKKRF 2282
                ANGMVYMEYS G+  + G+G++K KPKD AKRH LFK+RF
Sbjct: 744  AMSGANGMVYMEYSTGQ--KGGKGQIKGKPKDPAKRHYLFKRRF 785


>ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum]
            gi|557106496|gb|ESQ46811.1| hypothetical protein
            EUTSA_v10027651mg [Eutrema salsugineum]
          Length = 769

 Score = 1185 bits (3065), Expect = 0.0
 Identities = 602/745 (80%), Positives = 638/745 (85%), Gaps = 1/745 (0%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGEKEEK-RDFTKLELKPDHSNRPLWACADGRIFLETFSPLYK 227
            +  E+ Y     DED+RDGE E+K RD+++LELKPDH NRPLWACADGRIFLETFSPLYK
Sbjct: 26   IQNEEYYLGDDADEDSRDGEGEKKDRDYSELELKPDHVNRPLWACADGRIFLETFSPLYK 85

Query: 228  QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMID 407
            QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMID
Sbjct: 86   QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMID 145

Query: 408  FIYASTANYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISK 587
            FIYASTANYGKVKLVLKKNRYF+ESPFPEVLK LL D VI++AR S E   GGDGFT+ K
Sbjct: 146  FIYASTANYGKVKLVLKKNRYFIESPFPEVLKTLLSDGVISRARFSSEPYYGGDGFTVGK 205

Query: 588  AIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFR 767
              GE+E+G                KETHSFE+DP QVE VKQRCLP+ LNYPMLEEYDFR
Sbjct: 206  TSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAQVENVKQRCLPSELNYPMLEEYDFR 265

Query: 768  NDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIR 947
            ND VNPDLD+ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+
Sbjct: 266  NDNVNPDLDIELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIK 325

Query: 948  KSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGG 1127
            KS LCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKE+FRGNAGVVVTTYNMVAFGG
Sbjct: 326  KSVLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKEKFRGNAGVVVTTYNMVAFGG 385

Query: 1128 XXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERI 1307
                             WGLLLMDEVHVVPA+MFRKVISIT+SHCKLGLTATLVREDERI
Sbjct: 386  KRSEDSQMIIEDMRNREWGLLLMDEVHVVPANMFRKVISITKSHCKLGLTATLVREDERI 445

Query: 1308 TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 1487
            TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM
Sbjct: 446  TDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVM 505

Query: 1488 NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEA 1667
            NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+ERTKILEA
Sbjct: 506  NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEA 565

Query: 1668 FKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMA 1847
            FKTS+++NTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+L+DRMA
Sbjct: 566  FKTSKDLNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMA 625

Query: 1848 GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSD 2027
            GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D+G  LSYHS+ +
Sbjct: 626  GGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGASLSYHSQEE 685

Query: 2028 QLDLLNKVLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNS 2207
            QL LL KVL A D  VG E           QK             A GMVYMEY++GR+ 
Sbjct: 686  QLSLLAKVLNAGDDLVGLEQLEEDTDGMALQK-ERRNRSLSEMSGAKGMVYMEYNSGRHK 744

Query: 2208 RPGQGKLKNKPKDQAKRHSLFKKRF 2282
              GQ + K KPKD  KRH LFKKRF
Sbjct: 745  SSGQQQFK-KPKDPTKRHQLFKKRF 768


>ref|XP_002299520.2| DNA repair protein and transcription factor [Populus trichocarpa]
            gi|550346908|gb|EEE84325.2| DNA repair protein and
            transcription factor [Populus trichocarpa]
          Length = 803

 Score = 1184 bits (3063), Expect = 0.0
 Identities = 611/779 (78%), Positives = 643/779 (82%), Gaps = 35/779 (4%)
 Frame = +3

Query: 51   VTEEDTYYPQKFDEDNRDGEKE-EKRDFTKLELKPDHSNRPLWACADGRIFLETFSPLYK 227
            V E+D +YP++  +D RDGE E +KRDF+KLELKPDH+NRPLWACADGRIFLETFS LYK
Sbjct: 26   VAEDDAFYPEEAGDDFRDGETEGKKRDFSKLELKPDHANRPLWACADGRIFLETFSSLYK 85

Query: 228  QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMID 407
            QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETI+SVLNKLSKTKLPKEMID
Sbjct: 86   QAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMID 145

Query: 408  FIYASTANYGKVKLVLKKNRYFVESPFPE--------------VLKKLLRDDVIAKARIS 545
            FI+ STANYGKVKLVLKKNRYF+ESPF E              VLKKLL+D+VIAKARI 
Sbjct: 146  FIHGSTANYGKVKLVLKKNRYFIESPFTEASWFFVSGFPPLSLVLKKLLKDEVIAKARIQ 205

Query: 546  PEGSQGGDGFTISKAIGEIESGHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLP 725
            PE S G +GFTISKA GEI + HDG             KETHSFEVDP+QVE VKQRCLP
Sbjct: 206  PESSHGTEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLP 265

Query: 726  NALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGA 905
            NALNYPMLEEYDFRNDTVNPDL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGA
Sbjct: 266  NALNYPMLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGA 325

Query: 906  GKSLVGVSAATRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNA 1085
            GKSLVGVSAA RI+KSCLCLATNAVSVDQWAFQF LWS I  DQICRFTSDSKERF+GNA
Sbjct: 326  GKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFSLWSDISQDQICRFTSDSKERFKGNA 385

Query: 1086 GVVVTTYNMVAFGGXXXXXXXXXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCK 1265
            GVVVTTYNMVAFGG                 WGLLLMDEVHVVPAHMFRKVISIT+SHCK
Sbjct: 386  GVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCK 445

Query: 1266 LGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL 1445
            LGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL
Sbjct: 446  LGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL 505

Query: 1446 KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIY 1625
            KKENSKKKQALYVMNPNKFRACEFLIRFHE+QR DKIIVFADNLFALTEYA+KL +PMIY
Sbjct: 506  KKENSKKKQALYVMNPNKFRACEFLIRFHEEQRRDKIIVFADNLFALTEYAMKLHKPMIY 565

Query: 1626 GATSHVERTKILEAFKTSREVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 1805
            GATSH ERTKIL AFKTS EVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG
Sbjct: 566  GATSHAERTKILHAFKTSSEVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 625

Query: 1806 RILRAKGRLQDRMAGGKEEYNAFFYSLVSTDTQ--------------------EMYYSTK 1925
            RILRAKG+LQDRMAGGKEEYNAFFYSLVSTDTQ                    EMYYSTK
Sbjct: 626  RILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQMIDADSSWRSISYLRCFFFLEMYYSTK 685

Query: 1926 RQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSDQLDLLNKVLRAADKEVGEEXXXXXXX 2105
            RQQFLIDQGYSFKVITSLPP DSG +LSY+S  DQL LL KVL A D  VG E       
Sbjct: 686  RQQFLIDQGYSFKVITSLPPADSGADLSYNSLDDQLGLLAKVLSAGDDAVGLEQLDEDAD 745

Query: 2106 XXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNSRPGQGKLKNKPKDQAKRHSLFKKRF 2282
                 K             ANGMVYMEYS G+  + G+G++K KPKD AKRH LFK+RF
Sbjct: 746  DIALHKARRYMGSMSAMSGANGMVYMEYSTGQ--KGGKGQIKGKPKDPAKRHYLFKRRF 802


>ref|XP_002870640.1| DNA repair and transcription factor XPB1 [Arabidopsis lyrata subsp.
            lyrata] gi|297316476|gb|EFH46899.1| DNA repair and
            transcription factor XPB1 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 767

 Score = 1184 bits (3062), Expect = 0.0
 Identities = 597/738 (80%), Positives = 633/738 (85%), Gaps = 1/738 (0%)
 Frame = +3

Query: 72   YPQKFDEDNRDGEKEEK-RDFTKLELKPDHSNRPLWACADGRIFLETFSPLYKQAYDFLI 248
            Y  + DED+RDGE EEK RDFT+LELKPDH NRPLWACADGRIFLETFSPLYKQAYDFLI
Sbjct: 32   YYDEADEDSRDGEGEEKKRDFTELELKPDHGNRPLWACADGRIFLETFSPLYKQAYDFLI 91

Query: 249  AIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVSVLNKLSKTKLPKEMIDFIYASTA 428
            AIAEPVCRPESMHEY+LTPHSLYAAVSVGLETETI+SVLNKLSKTKLP E+IDFI+ASTA
Sbjct: 92   AIAEPVCRPESMHEYSLTPHSLYAAVSVGLETETIISVLNKLSKTKLPNEIIDFIHASTA 151

Query: 429  NYGKVKLVLKKNRYFVESPFPEVLKKLLRDDVIAKARISPEGSQGGDGFTISKAIGEIES 608
            NYGKVKLVLKKNRYF+ESPF EVLK+LL DD I +AR+S E   GGDGFTI K  GE+E+
Sbjct: 152  NYGKVKLVLKKNRYFIESPFTEVLKRLLSDDTINRARLSSEPYYGGDGFTIGKTSGELEA 211

Query: 609  GHDGXXXXXXXXXXXXXKETHSFEVDPNQVELVKQRCLPNALNYPMLEEYDFRNDTVNPD 788
            G                KETHSFEVDP QVE VKQRCLPNALNYPMLEEYDFRND VNPD
Sbjct: 212  GPGELLNEAELAAASEEKETHSFEVDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNPD 271

Query: 789  LDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLCLA 968
            LDMELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLCLA
Sbjct: 272  LDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLCLA 331

Query: 969  TNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGXXXXXXX 1148
            TNAVSVDQWA+QFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNM+AFGG       
Sbjct: 332  TNAVSVDQWAYQFKLWSTIRDDQICRFTSDSKERFRGNAGVVVTTYNMIAFGGKRSEEAE 391

Query: 1149 XXXXXXXXXXWGLLLMDEVHVVPAHMFRKVISITRSHCKLGLTATLVREDERITDLNFLI 1328
                      WGLLLMDEVHVVPAHMFRKVISIT+SHCKLGLTATLVREDE+ITDLNFLI
Sbjct: 392  KIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDEKITDLNFLI 451

Query: 1329 GPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRA 1508
            GPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRA
Sbjct: 452  GPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQALYVMNPNKFRA 511

Query: 1509 CEFLIRFHEQQRGDKIIVFADNLFALTEYALKLRRPMIYGATSHVERTKILEAFKTSREV 1688
            CEFLIRFHEQQRGDKIIVFADNLFALTEYA+KLR+PMIYGATSH+ERTKILEAFKTS++V
Sbjct: 512  CEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHIERTKILEAFKTSKDV 571

Query: 1689 NTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQDRMAGGKEEYN 1868
            NTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+L+DRMAGGKEEYN
Sbjct: 572  NTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYN 631

Query: 1869 AFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDSGPELSYHSRSDQLDLLNK 2048
            AFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP D+G  L YHS+ +QL LL K
Sbjct: 632  AFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLGYHSQEEQLSLLGK 691

Query: 2049 VLRAADKEVGEEXXXXXXXXXXXQKPXXXXXXXXXXXXANGMVYMEYSNGRNSRPGQGKL 2228
            VL A D  VG E           QK             A G VYMEY++GR+     G+ 
Sbjct: 692  VLNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSAMSGAKGRVYMEYNSGRHK---SGQQ 748

Query: 2229 KNKPKDQAKRHSLFKKRF 2282
              KPKD  +RH +F+KR+
Sbjct: 749  VKKPKDPTQRHQMFRKRY 766