BLASTX nr result
ID: Paeonia22_contig00010012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00010012
(2087 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 451 e-124
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 405 e-110
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 398 e-108
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 398 e-108
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 398 e-108
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 398 e-108
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 394 e-106
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 393 e-106
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 392 e-106
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 386 e-104
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 384 e-104
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 381 e-103
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 366 3e-98
ref|XP_002312652.1| RNA recognition motif-containing family prot... 360 2e-96
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 353 2e-94
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 330 2e-87
emb|CBI16834.3| unnamed protein product [Vitis vinifera] 305 5e-80
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 304 1e-79
ref|XP_002315647.1| RNA recognition motif-containing family prot... 304 1e-79
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 275 5e-71
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 451 bits (1159), Expect = e-124
Identities = 255/460 (55%), Positives = 282/460 (61%), Gaps = 1/460 (0%)
Frame = +1
Query: 709 MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 888
MAEEQLDYEDEE IS EGFLQMHR
Sbjct: 1 MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60
Query: 889 SEAPVRTGIGNGG-LQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAAHFPDQRVGPL 1065
SEAP +G+ GG QA KTDV LEAG SQGL IPGVS EGKYSN HF +++ GP+
Sbjct: 61 SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP-HFHEKKEGPM 119
Query: 1066 AAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMPGKIV 1245
A KGPE+GS ++ DG VSQKGRV EMT D QVRNLGFQGST IP K+G +P+++ GKI
Sbjct: 120 AVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIA 179
Query: 1246 SESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENGP 1425
+ES P+LNS GGPR PQ+ N+ VNENQIRP+V+NG
Sbjct: 180 NESTPVLNSGTGGPRAVPQMLSNQMGMNVNV-----------NRPMVNENQIRPAVDNGA 228
Query: 1426 TMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACKE 1605
TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD AA+ACKE
Sbjct: 229 TMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKE 288
Query: 1606 GMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMNY 1785
GMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q +Q QGRRPMNDGVGRGGGMN
Sbjct: 289 GMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQ---SQSQGRRPMNDGVGRGGGMNM 345
Query: 1786 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXXXXXX 1965
AVG KNMV
Sbjct: 346 Q-GGDAGRNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMV--GNTAGVGASGGG 402
Query: 1966 XXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
+MHPQ MMG+GFDPTYMGRGG YG
Sbjct: 403 YGQGLAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAYG 442
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 405 bits (1041), Expect = e-110
Identities = 234/465 (50%), Positives = 271/465 (58%), Gaps = 3/465 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MD MAEEQ+D+ DEE I EGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 880 MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQR 1053
+ RSEAP + G +G+ GLQAQK + E EAGGSQGL+IPGVS +GK+ N A +P+Q
Sbjct: 61 LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQD 120
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
P ++ PE+GS +Y G +SQKGRV E T D QV+N+GFQG + HK G+DP+ +P
Sbjct: 121 GQPAVSR-PEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
KI + A LNS GGP+GAP + N ++ENQ+RP +
Sbjct: 180 QKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNV-------------NHPMISENQVRPPI 226
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENGPTMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDP +A+
Sbjct: 227 ENGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAA 286
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
ACKEGM+GY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q Q QGRRP NDG+GRGG
Sbjct: 287 ACKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NDGLGRGG 344
Query: 1774 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMV-XXXXXXXXX 1950
MNY VG KNMV
Sbjct: 345 NMNYQ---SGDAGRNYGRGGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMVGSSAGVGNGA 401
Query: 1951 XXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MMHPQ MMGAGFDPTYMGRGG YG
Sbjct: 402 NGGAAYGQGPAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYG 446
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 398 bits (1023), Expect = e-108
Identities = 226/464 (48%), Positives = 271/464 (58%), Gaps = 2/464 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MD MAEEQ+D+ DEE I EGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 880 MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSN-AAHFPDQR 1053
+ RSEAP++ G +G+ GL+AQ+ + E +EAGGSQGL+IPGVS +GK+ N +A +P++
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
P A PE+ S +Y G+ +SQKG V E T D QV+NLGFQG T +K G+DP+ +P
Sbjct: 121 EQP-AVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
KI ++ A LNS GGP+G P + N +NENQ++P +
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNV-------------NHPVMNENQVQPPI 226
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENGPTMLFVGELHWWTTD+ELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEFYDP +A+
Sbjct: 227 ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAA 286
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
CKEGMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q Q QGRRP N+G+GRGG
Sbjct: 287 VCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NEGLGRGG 344
Query: 1774 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1953
+NY VG KNMV
Sbjct: 345 NLNYQ---SGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401
Query: 1954 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MMHPQ MMGAGFDPTYM RGGGYG
Sbjct: 402 NGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYG 445
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 398 bits (1023), Expect = e-108
Identities = 226/464 (48%), Positives = 271/464 (58%), Gaps = 2/464 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MD MAEEQ+D+ DEE I EGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 880 MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSN-AAHFPDQR 1053
+ RSEAP++ G +G+ GL+AQ+ + E +EAGGSQGL+IPGVS +GK+ N +A +P++
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
P A PE+ S +Y G+ +SQKG V E T D QV+NLGFQG T +K G+DP+ +P
Sbjct: 121 EQP-AVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
KI ++ A LNS GGP+G P + N +NENQ++P +
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNV-------------NHPVMNENQVQPPI 226
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENGPTMLFVGELHWWTTD+ELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEFYDP +A+
Sbjct: 227 ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAA 286
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
CKEGMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q Q QGRRP N+G+GRGG
Sbjct: 287 VCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NEGLGRGG 344
Query: 1774 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1953
+NY VG KNMV
Sbjct: 345 NLNYQ---SGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401
Query: 1954 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MMHPQ MMGAGFDPTYM RGGGYG
Sbjct: 402 NGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYG 445
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 398 bits (1023), Expect = e-108
Identities = 226/464 (48%), Positives = 271/464 (58%), Gaps = 2/464 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MD MAEEQ+D+ DEE I EGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 880 MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSN-AAHFPDQR 1053
+ RSEAP++ G +G+ GL+AQ+ + E +EAGGSQGL+IPGVS +GK+ N +A +P++
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
P A PE+ S +Y G+ +SQKG V E T D QV+NLGFQG T +K G+DP+ +P
Sbjct: 121 EQP-AVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
KI ++ A LNS GGP+G P + N +NENQ++P +
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNV-------------NHPVMNENQVQPPI 226
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENGPTMLFVGELHWWTTD+ELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEFYDP +A+
Sbjct: 227 ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAA 286
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
CKEGMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q Q QGRRP N+G+GRGG
Sbjct: 287 VCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NEGLGRGG 344
Query: 1774 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1953
+NY VG KNMV
Sbjct: 345 NLNYQ---SGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401
Query: 1954 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MMHPQ MMGAGFDPTYM RGGGYG
Sbjct: 402 NGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYG 445
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 398 bits (1023), Expect = e-108
Identities = 226/464 (48%), Positives = 271/464 (58%), Gaps = 2/464 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MD MAEEQ+D+ DEE I EGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 880 MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSN-AAHFPDQR 1053
+ RSEAP++ G +G+ GL+AQ+ + E +EAGGSQGL+IPGVS +GK+ N +A +P++
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
P A PE+ S +Y G+ +SQKG V E T D QV+NLGFQG T +K G+DP+ +P
Sbjct: 121 EQP-AVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
KI ++ A LNS GGP+G P + N +NENQ++P +
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNV-------------NHPVMNENQVQPPI 226
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENGPTMLFVGELHWWTTD+ELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEFYDP +A+
Sbjct: 227 ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAA 286
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
CKEGMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q Q QGRRP N+G+GRGG
Sbjct: 287 VCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NEGLGRGG 344
Query: 1774 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1953
+NY VG KNMV
Sbjct: 345 NLNYQ---SGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401
Query: 1954 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MMHPQ MMGAGFDPTYM RGGGYG
Sbjct: 402 NGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYG 445
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 394 bits (1011), Expect = e-106
Identities = 228/460 (49%), Positives = 265/460 (57%), Gaps = 1/460 (0%)
Frame = +1
Query: 709 MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 888
MA+EQ+DYEDEE I E FLQMHR
Sbjct: 1 MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEMGEDDEYDDLYNDVNIG-ENFLQMHR 59
Query: 889 SEAP-VRTGIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAAHFPDQRVGPL 1065
SEAP +GNGG Q + ++ L +E+GGSQGL+IPGV+ E KYS HFP+Q V
Sbjct: 60 SEAPPAPPSVGNGGFQPRNSNDLR--VESGGSQGLNIPGVAVESKYSTGTHFPEQNV--- 114
Query: 1066 AAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMPGKIV 1245
KGPE+GSV Y DG+ ++QK RV EMT D Q RN+GFQGST P GVDP++M KI
Sbjct: 115 --KGPEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKIS 172
Query: 1246 SESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENGP 1425
++ P+ N+ G PR PQ+ N+ NENQIRP +ENG
Sbjct: 173 NDPTPVPNA--GVPRVIPQLPASQMNMNMDT-----------NRSATNENQIRPPLENGS 219
Query: 1426 TMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACKE 1605
TML+VGELHWWTTD+ELE+VLSQYG VKEIKFFDERASGKSKGYCQVEFYD AA+ACKE
Sbjct: 220 TMLYVGELHWWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKE 279
Query: 1606 GMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMNY 1785
GMNG+LFNGRACVVAFAS QTLKQMGASYMNK+Q QPQ +Q QGRRPMNDG GRGG MNY
Sbjct: 280 GMNGHLFNGRACVVAFASQQTLKQMGASYMNKNQGQPQ-SQNQGRRPMNDGAGRGGNMNY 338
Query: 1786 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXXXXXX 1965
++G KN+V
Sbjct: 339 Q-GGDAGRNFGRGGWGRGGQGILNRGPGGGGRMGGRGGSMGAKNIVGGAGGVGSGANGGG 397
Query: 1966 XXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
M+ PQ+MM AGFDPTYMGRG GYG
Sbjct: 398 YGQGLAGPAFGGPAGAMLPPQSMMRAGFDPTYMGRGAGYG 437
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 393 bits (1009), Expect = e-106
Identities = 210/364 (57%), Positives = 243/364 (66%), Gaps = 2/364 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MD MAEEQ+DYE+EE I +G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 880 MHRSEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAA-HFPDQR 1053
+ EAP + G+GNG LQ +KTDV E ++AG SQG ++PGVS EGKY+NA HFP Q
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
+A P +GS NY DGA VSQKG V E T D VRN+GFQGST P ++GVDP+NMP
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
G++ +E AP+LN GP+GA N+ VNENQIRP +
Sbjct: 181 GRVANEPAPVLNPGAAGPQGA------------LIPANQMGVNINVNRAMVNENQIRPPL 228
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENG TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+D AA+
Sbjct: 229 ENGGTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAA 288
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
ACK+GMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ +Q QGRRPMNDG GRGG
Sbjct: 289 ACKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQ-SQTQGRRPMNDGGGRGG 347
Query: 1774 GMNY 1785
MNY
Sbjct: 348 NMNY 351
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 392 bits (1008), Expect = e-106
Identities = 210/364 (57%), Positives = 243/364 (66%), Gaps = 2/364 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MD MAEEQ+DYE+EE I +G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 880 MHRSEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAA-HFPDQR 1053
+ EAP + G+GNG LQ +KTDV E ++AG SQG ++PGVS EGKY+NA HFP Q
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
+A P +GS NY DGA VSQKG V E T D VRN+GFQGST P ++GVDP+NMP
Sbjct: 121 DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
G++ +E AP+LN GP+GA N+ VNENQIRP +
Sbjct: 181 GRVANEPAPVLNPGAAGPQGA------------LIPANQMGVNINVNRAMVNENQIRPPL 228
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENG TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+D AA+
Sbjct: 229 ENGGTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAA 288
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
ACK+GMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ +Q QGRRPMNDG GRGG
Sbjct: 289 ACKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQ-SQTQGRRPMNDGGGRGG 347
Query: 1774 GMNY 1785
MNY
Sbjct: 348 NMNY 351
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 386 bits (992), Expect = e-104
Identities = 205/361 (56%), Positives = 240/361 (66%), Gaps = 2/361 (0%)
Frame = +1
Query: 709 MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 888
MAEEQ+DYE++E I +G LQ +
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60
Query: 889 SEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQRVGP 1062
EAP + G+GNG LQ +KTDV E ++ GGSQG +IPGVS EGKY+NA +HFP Q
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120
Query: 1063 LAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMPGKI 1242
+A P +GS NY DGA VSQKG V E T D VRN+GFQGST P ++GVDP+NMPG++
Sbjct: 121 VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRV 180
Query: 1243 VSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENG 1422
+E AP+LN GP+GA N++ VNENQIRP +ENG
Sbjct: 181 ANEPAPVLNPGAAGPQGA------------LIPANQMGVNANVNRVMVNENQIRPPLENG 228
Query: 1423 PTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACK 1602
TMLFVGELHWWTTD+ELESVLSQYGR KEIKFFDERASGKSKGYCQVEF+D AA+ACK
Sbjct: 229 GTMLFVGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACK 288
Query: 1603 EGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMN 1782
+GMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ +Q QG RPMNDG GRGG N
Sbjct: 289 DGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQ-SQNQGSRPMNDGGGRGGNTN 347
Query: 1783 Y 1785
Y
Sbjct: 348 Y 348
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 384 bits (987), Expect = e-104
Identities = 228/461 (49%), Positives = 256/461 (55%), Gaps = 2/461 (0%)
Frame = +1
Query: 709 MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 888
MAEEQ+DYEDEE IS EGFLQMHR
Sbjct: 1 MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60
Query: 889 SEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQRVGP 1062
SEAP+ G +GNGGLQAQKTDV E+ ++AG SQ IPGVS +GKYS+A A FP+Q+ P
Sbjct: 61 SEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQGQP 120
Query: 1063 LAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMPGKI 1242
AK PELGS Y GST +P G D +++ GK
Sbjct: 121 PVAKEPELGSTGY---------------------------GSTTMPPNVGGDSSDITGKT 153
Query: 1243 VSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENG 1422
ES P +NS GP G Q+ N+ NENQIRP VENG
Sbjct: 154 ALESVPSMNSGTAGPTGVTQMPTNQISIKVNA-----------NRPMFNENQIRPPVENG 202
Query: 1423 PTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACK 1602
TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+DP AA+ACK
Sbjct: 203 STMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACK 262
Query: 1603 EGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMN 1782
EGM+GYLFNGRACVVAFASPQTLKQMGASY++KSQ Q Q +QQ GRRPMN+GVGRGGG+N
Sbjct: 263 EGMDGYLFNGRACVVAFASPQTLKQMGASYLSKSQGQTQ-SQQPGRRPMNEGVGRGGGVN 321
Query: 1783 YSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXXXXX 1962
Y A+G KNM
Sbjct: 322 YQTGDTGGRNFGRGGWGRGGQGVANRGPGGGGPMRGRGGAMGAKNMA-GNPAGVGTGANG 380
Query: 1963 XXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MM+PQ MMGAGFDPTYMGRGGGYG
Sbjct: 381 GYGQGLAGPGFGGPVGGMMNPQGMMGAGFDPTYMGRGGGYG 421
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 381 bits (979), Expect = e-103
Identities = 204/361 (56%), Positives = 238/361 (65%), Gaps = 2/361 (0%)
Frame = +1
Query: 709 MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 888
MAEEQ+DYE++E I +G LQ +
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60
Query: 889 SEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQRVGP 1062
EAP + G+GNG LQ +KTDV E ++ GGSQG +IPGVS EGKY+NA + FP Q
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120
Query: 1063 LAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMPGKI 1242
+A P +GS NY DGA VSQKG V E T D VRN+GFQGST P ++GVDP+NMPG+
Sbjct: 121 VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRA 180
Query: 1243 VSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENG 1422
+E AP+LN GP+GA N++ VNENQIRP +ENG
Sbjct: 181 ANEPAPVLNPGAAGPQGA------------LIPANQMGVNANVNRVMVNENQIRPPLENG 228
Query: 1423 PTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACK 1602
TMLFVGELHWWTTD+ELESVLSQYGR KEIKFFDERASGKSKGYCQVEF+D AA+ACK
Sbjct: 229 GTMLFVGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACK 288
Query: 1603 EGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMN 1782
+GMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ +Q QG RPMNDG GRGG N
Sbjct: 289 DGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQ-SQNQGSRPMNDGGGRGGNTN 347
Query: 1783 Y 1785
Y
Sbjct: 348 Y 348
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 366 bits (939), Expect = 3e-98
Identities = 215/463 (46%), Positives = 249/463 (53%), Gaps = 1/463 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MDPM EEQ+DYE+EE I EGFLQ
Sbjct: 1 MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 880 MHRSEAPVR-TGIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAAHFPDQRV 1056
MHR E P+ G+GNGGLQAQK +V E ++ G SQ + PG S EGKYS+ P+Q+
Sbjct: 61 MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSSV---PEQKD 117
Query: 1057 GPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMPG 1236
P + PE+ S QKGRV EMT D QVRN+GFQG+ + D +++ G
Sbjct: 118 QPPVSVVPEMAS----------QKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTG 167
Query: 1237 KIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVE 1416
KI + P +NS GP Q+ N+ VNENQIRP VE
Sbjct: 168 KIANGPIPSMNSGSNGPPAVQQMPANQMNMKINV-----------NRPMVNENQIRPPVE 216
Query: 1417 NGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASA 1596
NG LFVGELHWWTTD+ELE VLSQ+GR+KEIKFFDERASGKSKGYCQV+FYDP AASA
Sbjct: 217 NGSATLFVGELHWWTTDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASA 276
Query: 1597 CKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGG 1776
CKEGM+GY+FNGRACVVAFAS QTLKQMG SY+NKSQ Q Q Q QGRRPMNDG GRGG
Sbjct: 277 CKEGMDGYVFNGRACVVAFASSQTLKQMGDSYVNKSQGQVQ-TQPQGRRPMNDGAGRGGN 335
Query: 1777 MNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXXX 1956
MN+ A+G +NMV
Sbjct: 336 MNFQ-GGDTGRNFGRGNNWGRGGQGVLNRGPGGGGPGRGRGAMGARNMVGNNAGVGTGAN 394
Query: 1957 XXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MM+ MMG GFDPTYMGRGGGYG
Sbjct: 395 GGGYGQGLGGPGFGGPVGGMMNAPGMMGPGFDPTYMGRGGGYG 437
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 360 bits (923), Expect = 2e-96
Identities = 209/411 (50%), Positives = 243/411 (59%), Gaps = 4/411 (0%)
Frame = +1
Query: 865 EGFLQMHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPG--VSAEGKYSNA- 1032
E FLQMH SEAP +GNGG Q + ES +E GGSQ L+I G + EG YSNA
Sbjct: 42 ENFLQMHGSEAPAPPATVGNGGFQTRNAH--ESRIETGGSQALAITGGGPAVEGIYSNAK 99
Query: 1033 AHFPDQRVGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSG 1212
AHFP+Q+ +A + ++G V DG+ V+QKGRV EM+ D QVRN+GFQ ST +P G
Sbjct: 100 AHFPEQKQVAVAVEAQDVGPV---DGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIG 156
Query: 1213 VDPTNMPGKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNE 1392
VDP++M K E PL + GPRGAPQ+ N+ VNE
Sbjct: 157 VDPSDMSRKNAIEPEPLPITGSAGPRGAPQMQVNQMHMSADV-----------NRPVVNE 205
Query: 1393 NQIRPSVENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF 1572
NQ+RP +ENG T L+VGELHWWTTD+ELES SQ+GRVKEIKFFDERASGKSKGYCQV+F
Sbjct: 206 NQVRPPIENGSTTLYVGELHWWTTDAELESFASQFGRVKEIKFFDERASGKSKGYCQVDF 265
Query: 1573 YDPGAASACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMN 1752
Y+ AA+ACKEGMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ Q QGR MN
Sbjct: 266 YEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQPQ-TQSQGRGSMN 324
Query: 1753 DGVGRGGGMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXX 1932
DG GRGG N+ A+GPKNM
Sbjct: 325 DGAGRGGNANFQ---SGDGGRNYGRGAWGRGGQGILNRGPGGGPMRGRGAMGPKNMAGNV 381
Query: 1933 XXXXXXXXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MM PQ MMGAGFDP YMGRGGGYG
Sbjct: 382 AGVGSGANGGGYGQGLAGPAFGGPAGGMMPPQGMMGAGFDPLYMGRGGGYG 432
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 353 bits (906), Expect = 2e-94
Identities = 221/464 (47%), Positives = 256/464 (55%), Gaps = 5/464 (1%)
Frame = +1
Query: 709 MAEEQLDYEDEEXXXXXXXXXXXXXX-ISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMH 885
MAE+ +D+EDEE IS EGFLQ+
Sbjct: 1 MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60
Query: 886 RSEAP---VRTGIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQR 1053
RSEAP G+GNG LQAQK + E E GGSQ +IPGVSAEG++S+A + FP Q+
Sbjct: 61 RSEAPSLPAAAGVGNG-LQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQ 119
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
G K E GS+ Y DGA SQKGR+ GFQGS + H GVD +++P
Sbjct: 120 DGLKVDKKSEAGSMVYPDGASGSQKGRI----------VAGFQGSKPMLHSVGVDSSDIP 169
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
GK+V+E NS GPRG + VNENQIRPS+
Sbjct: 170 GKMVNEPIQAPNSGGAGPRGILPMQGNQTTVNANVSHPI-----------VNENQIRPSI 218
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENG TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVE+YD AA
Sbjct: 219 ENGSTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAV 278
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
ACKEGM+G++FNGRACVVAFASPQTLKQMGA+YM+K+QVQ Q +Q QGRRP+NDGVGRGG
Sbjct: 279 ACKEGMHGHVFNGRACVVAFASPQTLKQMGAAYMSKNQVQNQ-SQPQGRRPINDGVGRGG 337
Query: 1774 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1953
N+ A+G KNMV
Sbjct: 338 NPNFQ-SGDGGRNFGRGGWGRGGQGAPNRGPGSGGPMRGRGGAMGAKNMV----GNNAGV 392
Query: 1954 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MM+PQ MMG GFDPTYMGRG GYG
Sbjct: 393 GGGGYGQGLAGPPFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYG 436
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 330 bits (846), Expect = 2e-87
Identities = 203/464 (43%), Positives = 243/464 (52%), Gaps = 2/464 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MDP A+EQLDY DEE I EGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60
Query: 880 MHRSEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQR 1053
+ RSE PV + GNG QAQK S GS+ IPG++ EGKY+ FP Q+
Sbjct: 61 LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120
Query: 1054 VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMP 1233
P+ + E + D A ++ + MT + Q N G+QGS +P K G DP MP
Sbjct: 121 GEPVVERETERPA----DAAQKARPSAIT-MTLNSQAGNSGYQGSMPMPQKIGADPMAMP 175
Query: 1234 GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 1413
K SE+ PL+NS GPR P + N ++E RPS+
Sbjct: 176 EKNASEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNM---------NNPVISETPFRPSL 226
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENG TMLFVGELHWWTTD+ELESVL+QYG VKEIKFFDERASGKSKGYCQVEF+DP +A+
Sbjct: 227 ENGNTMLFVGELHWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAA 286
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
ACKEGMNGY FNGRACVVAFA+PQT+KQMG+SY NK+Q Q Q +Q QGRRPMN+GVGR G
Sbjct: 287 ACKEGMNGYNFNGRACVVAFATPQTIKQMGSSYANKTQNQVQ-SQPQGRRPMNEGVGR-G 344
Query: 1774 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1953
G NY+ A+G KNM+
Sbjct: 345 GPNYT---PGDAGRNFGRGSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMM--VNPGAGNG 399
Query: 1954 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
+MHPQ MMG GFDP++MGRG GYG
Sbjct: 400 AGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPSFMGRGAGYG 443
>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 305 bits (781), Expect = 5e-80
Identities = 164/257 (63%), Positives = 186/257 (72%), Gaps = 1/257 (0%)
Frame = +1
Query: 865 EGFLQMHRSEAPVRTGIGNGG-LQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAAHF 1041
EGFLQMHRSEAP +G+ GG QA KTDV LEAG SQGL IPGVS EGKYSN HF
Sbjct: 35 EGFLQMHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP-HF 93
Query: 1042 PDQRVGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDP 1221
+++ GP+A KGPE+GS ++ DG VSQKGRV EMT D QVRNLGFQGST IP K+G +P
Sbjct: 94 HEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEP 153
Query: 1222 TNMPGKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQI 1401
+++ GKI +ES P+LNS GGPR PQ+ N+ VNENQI
Sbjct: 154 SDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNV-----------NRPMVNENQI 202
Query: 1402 RPSVENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDP 1581
RP+V+NG TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD
Sbjct: 203 RPAVDNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDA 262
Query: 1582 GAASACKEGMNGYLFNG 1632
AA+A G G L G
Sbjct: 263 SAAAAF-SGKEGILNRG 278
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 304 bits (778), Expect = 1e-79
Identities = 185/411 (45%), Positives = 213/411 (51%), Gaps = 4/411 (0%)
Frame = +1
Query: 865 EGFLQMHRSEAPVRTGI-GNGGLQAQKTDVLESTLEAGGSQGLSIPG--VSAEGKYSNA- 1032
E FLQMH SEAP GNGG Q + ES +E GGSQ L+ G V+ EGKYSNA
Sbjct: 42 ENFLQMHGSEAPAPPATAGNGGFQTRNAH--ESRVETGGSQVLATSGAGVAVEGKYSNAG 99
Query: 1033 AHFPDQRVGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSG 1212
AHFP+Q+ + + ++GS+ Y DG+ V+QKG
Sbjct: 100 AHFPEQKQAGIGVEANDVGSIGYGDGSSVAQKGSA------------------------- 134
Query: 1213 VDPTNMPGKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNE 1392
GPRG PQ+ N+ VNE
Sbjct: 135 -----------------------GPRGVPQMQVNQMNMNADV-----------NRPVVNE 160
Query: 1393 NQIRPSVENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF 1572
NQ+RP +ENGPT L+VGELHWWTTD+ELESV SQYGRVKEIKFFDERASGKSKGYCQV+F
Sbjct: 161 NQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGKSKGYCQVDF 220
Query: 1573 YDPGAASACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMN 1752
Y+ AA+ACKEGMN ++FNGR CVVAFAS QTLKQMGASYM+K+Q QPQ Q QGR MN
Sbjct: 221 YEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQ-PQSQGRGSMN 279
Query: 1753 DGVGRGGGMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXX 1932
DG+GRGG NY +GPKNM
Sbjct: 280 DGMGRGGNANYQ---SGDGGRNYGRGGWGRGGQGVLNRGPGGGPMRGRGGMGPKNMAGNV 336
Query: 1933 XXXXXXXXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MMH Q MMGAGFDP YMGRGGGYG
Sbjct: 337 AGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMGAGFDPLYMGRGGGYG 387
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 304 bits (778), Expect = 1e-79
Identities = 185/411 (45%), Positives = 213/411 (51%), Gaps = 4/411 (0%)
Frame = +1
Query: 865 EGFLQMHRSEAPVRTGI-GNGGLQAQKTDVLESTLEAGGSQGLSIPG--VSAEGKYSNA- 1032
E FLQMH SEAP GNGG Q + ES +E GGSQ L+ G V+ EGKYSNA
Sbjct: 42 ENFLQMHGSEAPAPPATAGNGGFQTRNAH--ESRVETGGSQVLATSGAGVAVEGKYSNAG 99
Query: 1033 AHFPDQRVGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSG 1212
AHFP+Q+ + + ++GS+ Y DG+ V+QKG
Sbjct: 100 AHFPEQKQAGIGVEANDVGSIGYGDGSSVAQKGSA------------------------- 134
Query: 1213 VDPTNMPGKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNE 1392
GPRG PQ+ N+ VNE
Sbjct: 135 -----------------------GPRGVPQMQVNQMNMNADV-----------NRPVVNE 160
Query: 1393 NQIRPSVENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF 1572
NQ+RP +ENGPT L+VGELHWWTTD+ELESV SQYGRVKEIKFFDERASGKSKGYCQV+F
Sbjct: 161 NQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGKSKGYCQVDF 220
Query: 1573 YDPGAASACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMN 1752
Y+ AA+ACKEGMN ++FNGR CVVAFAS QTLKQMGASYM+K+Q QPQ Q QGR MN
Sbjct: 221 YEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQ-PQSQGRGSMN 279
Query: 1753 DGVGRGGGMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXX 1932
DG+GRGG NY +GPKNM
Sbjct: 280 DGMGRGGNANYQ---SGDGGRNYGRGGWGRGGQGVLNRGPGGGPMRGRGGMGPKNMAGNV 336
Query: 1933 XXXXXXXXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMGRGGGYG 2085
MMH Q MMGAGFDP YMGRGGGYG
Sbjct: 337 AGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMGAGFDPLYMGRGGGYG 387
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 275 bits (704), Expect = 5e-71
Identities = 164/364 (45%), Positives = 199/364 (54%), Gaps = 2/364 (0%)
Frame = +1
Query: 700 MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 879
MDP+ +EQLDY DEE I EGF+Q
Sbjct: 1 MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60
Query: 880 MHRSEAPVRTGIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYS-NAAHFPDQRV 1056
M RSEAP + +GN K + EA SQ ++ V EG Y+ N DQ+
Sbjct: 61 MQRSEAPPPSAVGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQKN 120
Query: 1057 GPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDPTNMPG 1236
A GP SQ+ R+ E+ Q +LG+QGS ++ HK+ D N
Sbjct: 121 NLTAVGGP-------AQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSE 173
Query: 1237 KIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV- 1413
IV E A L+ + G +G PQ N+ +E IRPS
Sbjct: 174 NIVGEPASLVYPNTGSSKGVPQAPSNLMNSNANVNVNV-------NRSMDDEYLIRPSGG 226
Query: 1414 ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1593
ENG M++VGELHWWTTD+E+ESVL QYGRVKEIKFFDERASGKSKGYCQVEFYDP AA+
Sbjct: 227 ENGNPMIYVGELHWWTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAAT 286
Query: 1594 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1773
ACK+GM G++FNGRACVV +A+PQT KQMGASY NK+Q Q Q +Q QGR PMNDG GRG
Sbjct: 287 ACKDGMQGHIFNGRACVVTYANPQTSKQMGASY-NKNQGQSQ-SQLQGRNPMNDGAGRGN 344
Query: 1774 GMNY 1785
G NY
Sbjct: 345 GTNY 348