BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00009548
         (1163 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   346   5e-98
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              342   7e-97
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   338   8e-96
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   338   8e-96
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   335   1e-94
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   333   1e-92
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   326   1e-90
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   326   1e-90
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   323   4e-90
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr...   310   4e-84
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   311   1e-83
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid...   309   5e-83
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme...   293   2e-82
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps...   296   1e-80
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr...   296   3e-79
ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, par...   295   3e-79
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid...   295   3e-79
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]            295   3e-79
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps...   296   1e-78
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme...   296   2e-78

>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  346 bits (888), Expect(2) = 5e-98
 Identities = 175/267 (65%), Positives = 211/267 (79%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA +CP NL +GK++   N              S++  S  PLLIQ RLF NG AVKG
Sbjct: 373  EDLALRCPNNLCRGKYMNNGN--------------SDVCDSRYPLLIQCRLFNNGCAVKG 418

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            TLL+N+KLPPRTI  R SMIKVETD  LS  QTVNS+EI G SNQP+++YLS++LIALLS
Sbjct: 419  TLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLS 478

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGGVP +YF+ +L +ALED     S+KRAALRV LR+GEMDD  V RM+LSGIPIDEPFL
Sbjct: 479  YGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFL 538

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
             H LS ++ EERKGL+ G+LPV++C+YLMGTADPTG L+SD+VCIILD+G + G+VLVYK
Sbjct: 539  HHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYK 598

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            HPGLHFGDIHVLNATYV+A+E+FVGNA
Sbjct: 599  HPGLHFGDIHVLNATYVEALEEFVGNA 625



 Score = 40.0 bits (92), Expect(2) = 5e-98
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = +1

Query: 73  KGDNGHIVYSEDGEPLIHTDGTGFI 147
           + ++GH+VY ED +PLI TDGTGFI
Sbjct: 347 RDEDGHVVYDEDWKPLILTDGTGFI 371


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  342 bits (878), Expect(2) = 7e-97
 Identities = 173/267 (64%), Positives = 208/267 (77%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA +CP NL +GK++   N +                    PLLIQ RLF NG AVKG
Sbjct: 365  EDLALRCPNNLCRGKYMNNGNSD--------------------PLLIQCRLFNNGCAVKG 404

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            TLL+N+KLPPRTI  R SMIKVETD  LS  QTVNS+EI G SNQP+++YLS++LIALLS
Sbjct: 405  TLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIALLS 464

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGGVP +YF+ +L +ALED     S+KRAALRV LR+GEMDD  V RM+LSGIPIDEPFL
Sbjct: 465  YGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFL 524

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
             H LS ++ EERKGL+ G+LPV++C+YLMGTADPTG L+SD+VCIILD+G + G+VLVYK
Sbjct: 525  HHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYK 584

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            HPGLHFGDIHVLNATYV+A+E+FVGNA
Sbjct: 585  HPGLHFGDIHVLNATYVEALEEFVGNA 611



 Score = 40.0 bits (92), Expect(2) = 7e-97
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = +1

Query: 73  KGDNGHIVYSEDGEPLIHTDGTGFI 147
           + ++GH+VY ED +PLI TDGTGFI
Sbjct: 339 RDEDGHVVYDEDWKPLILTDGTGFI 363


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334279|gb|ERP58266.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  338 bits (866), Expect(2) = 8e-96
 Identities = 172/266 (64%), Positives = 209/266 (78%)
 Frame = +2

Query: 155  DLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKGT 334
            DLA KCPKN FKG  +  +N E+   +    E   E +  +PPLLIQ RLF NG AVKGT
Sbjct: 315  DLALKCPKNQFKGTCLRASNIERLNVHNEVMEQYPECRNGDPPLLIQFRLFNNGRAVKGT 374

Query: 335  LLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLSY 514
             LVN+KL  +T+H R SMIKVETD  LS   + NSLEIVG S++PK+T+LS++LIALLSY
Sbjct: 375  FLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNSLEIVGTSSRPKKTFLSKNLIALLSY 434

Query: 515  GGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFLQ 694
            GGVP+++F+GI+ NALED     SNK AALRV L YG+MDD  VA M+  GIP++EP+LQ
Sbjct: 435  GGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQ 494

Query: 695  HRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYKH 874
             RLSILMKEE+K LKGG++PV E YYLMGTADPTGLLESD+VCIILD G ISG+VL+Y++
Sbjct: 495  CRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRN 554

Query: 875  PGLHFGDIHVLNATYVKAMEDFVGNA 952
            PGLHFGDIH+L ATYV+ +EDFVGNA
Sbjct: 555  PGLHFGDIHILKATYVRELEDFVGNA 580



 Score = 41.2 bits (95), Expect(2) = 8e-96
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +1

Query: 82  NGHIVYSEDGEPLIHTDGTGFI 147
           +G++VY  DG+PLIHTDGTGFI
Sbjct: 291 DGNVVYGTDGKPLIHTDGTGFI 312


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334280|gb|ERP58267.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  338 bits (866), Expect(2) = 8e-96
 Identities = 172/266 (64%), Positives = 209/266 (78%)
 Frame = +2

Query: 155  DLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKGT 334
            DLA KCPKN FKG  +  +N E+   +    E   E +  +PPLLIQ RLF NG AVKGT
Sbjct: 293  DLALKCPKNQFKGTCLRASNIERLNVHNEVMEQYPECRNGDPPLLIQFRLFNNGRAVKGT 352

Query: 335  LLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLSY 514
             LVN+KL  +T+H R SMIKVETD  LS   + NSLEIVG S++PK+T+LS++LIALLSY
Sbjct: 353  FLVNKKLTHQTLHIRPSMIKVETDPKLSSTFSKNSLEIVGTSSRPKKTFLSKNLIALLSY 412

Query: 515  GGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFLQ 694
            GGVP+++F+GI+ NALED     SNK AALRV L YG+MDD  VA M+  GIP++EP+LQ
Sbjct: 413  GGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQ 472

Query: 695  HRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYKH 874
             RLSILMKEE+K LKGG++PV E YYLMGTADPTGLLESD+VCIILD G ISG+VL+Y++
Sbjct: 473  CRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRN 532

Query: 875  PGLHFGDIHVLNATYVKAMEDFVGNA 952
            PGLHFGDIH+L ATYV+ +EDFVGNA
Sbjct: 533  PGLHFGDIHILKATYVRELEDFVGNA 558



 Score = 41.2 bits (95), Expect(2) = 8e-96
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +1

Query: 82  NGHIVYSEDGEPLIHTDGTGFI 147
           +G++VY  DG+PLIHTDGTGFI
Sbjct: 269 DGNVVYGTDGKPLIHTDGTGFI 290


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
            gi|550336519|gb|ERP59562.1| hypothetical protein
            POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  335 bits (860), Expect(2) = 1e-94
 Identities = 172/266 (64%), Positives = 207/266 (77%)
 Frame = +2

Query: 155  DLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKGT 334
            DLA KCPKN  KG  +  +N E+   +    E   E    +PPLLIQ RLF NG AVKGT
Sbjct: 293  DLALKCPKNQVKGTCLQASNIERLRVHNEVMEQNPECLHGDPPLLIQFRLFNNGRAVKGT 352

Query: 335  LLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLSY 514
             LVN+KL  RT+H R SMIKVETD  LS+  + NSLEIVG S +PK+T+LS++LIALLSY
Sbjct: 353  FLVNKKLNHRTLHVRPSMIKVETDPKLSNTFSKNSLEIVGTSCRPKKTFLSKNLIALLSY 412

Query: 515  GGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFLQ 694
            GGVP+++F+GIL NALED     SNK+AALRV L YG+MDD  VA M+  GIP++EP+LQ
Sbjct: 413  GGVPEEFFMGILNNALEDAHGILSNKKAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQ 472

Query: 695  HRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYKH 874
            H LSIL KEE+K LKGG++PV E YYLMGTADPTGLLESD+VCIILD G +SG+VLVY++
Sbjct: 473  HHLSILKKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQVSGEVLVYRN 532

Query: 875  PGLHFGDIHVLNATYVKAMEDFVGNA 952
            PGLHFGDIH+L ATYV+ +EDFVGNA
Sbjct: 533  PGLHFGDIHILKATYVRELEDFVGNA 558



 Score = 39.7 bits (91), Expect(2) = 1e-94
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +1

Query: 82  NGHIVYSEDGEPLIHTDGTGFI 147
           +G+ VY  DG+PLIHTDGTGFI
Sbjct: 269 DGNAVYGTDGKPLIHTDGTGFI 290


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  333 bits (854), Expect(2) = 1e-92
 Identities = 169/267 (63%), Positives = 207/267 (77%), Gaps = 5/267 (1%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQ-----KSEPPLLIQIRLFYNG 316
            EDLA +CP NL +GK++   N ++ +GN       SEL+       EPPLLIQ RLF NG
Sbjct: 676  EDLALRCPNNLCRGKYMXNGNSDRLVGNVELEGKFSELRCLETHTWEPPLLIQCRLFNNG 735

Query: 317  NAVKGTLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHL 496
             AVKGTLL+N+KLPPRTI  R SMIKVETD  LS  QTVNS+EI G SNQP+++YLS++L
Sbjct: 736  CAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYL 795

Query: 497  IALLSYGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPI 676
            IALLSYGGVP +YF+ +L +ALED     S       + LR+ EMDD  V RM+LSGIPI
Sbjct: 796  IALLSYGGVPNEYFMNLLKDALEDAPSVQS-------ISLRFDEMDDSIVTRMILSGIPI 848

Query: 677  DEPFLQHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGK 856
            DEPFLQHRLS ++ EERKGL+ G+LPV++C+YLMGTADPTG L+SD+VCIILD+G + G+
Sbjct: 849  DEPFLQHRLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGKLKSDEVCIILDHGQVQGR 908

Query: 857  VLVYKHPGLHFGDIHVLNATYVKAMED 937
            VLVYKHPGLHFGDIHVLNATYV+A+E+
Sbjct: 909  VLVYKHPGLHFGDIHVLNATYVEALEE 935



 Score = 35.4 bits (80), Expect(2) = 1e-92
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +1

Query: 79  DNGHIVYSEDGEPLIHTDGTGFI 147
           ++G +VY ED  PLI TDGTGFI
Sbjct: 652 EDGXVVYDEDWXPLILTDGTGFI 674


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843309|ref|XP_006475556.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
            sinensis] gi|557554497|gb|ESR64511.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  326 bits (836), Expect(2) = 1e-90
 Identities = 170/274 (62%), Positives = 212/274 (77%), Gaps = 7/274 (2%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSE-----PPLLIQIRLFYNG 316
            EDLA KCP  ++K K     + E+ +       N S++ ++E     PPLL+Q+RLFYNG
Sbjct: 423  EDLALKCPTYVYKEKCTNDDSTERSIDRKELEANFSDVARTESHYGEPPLLMQVRLFYNG 482

Query: 317  NAVKGTLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHL 496
             AVKGTLL+N+KLPP+TI  R SMIKV+ D +LS  QT NSLE+V  SNQP++TYLSR+L
Sbjct: 483  TAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNL 542

Query: 497  IALLSYGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMD-DFTVARMLLSGIP 673
            IALLSYGGVP+ +F+ IL NAL+D R   SNKR AL+V   YG MD DFT ARM+LSGI 
Sbjct: 543  IALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMILSGIS 602

Query: 674  IDEPFLQHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLIS- 850
            +DEP+LQHRLSILMKEE+K L+ G+LPV+E YYLMGT DPTG+L+S++VCIIL +G +S 
Sbjct: 603  LDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSW 662

Query: 851  GKVLVYKHPGLHFGDIHVLNATYVKAMEDFVGNA 952
             KVLVY++PGLHFGDIHVL ATYVK +EDFVG +
Sbjct: 663  EKVLVYRNPGLHFGDIHVLKATYVKELEDFVGTS 696



 Score = 35.8 bits (81), Expect(2) = 1e-90
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +1

Query: 82  NGHIVYSEDGEPLIHTDGTGFI 147
           +G++VY +DGE LIHTDGTGFI
Sbjct: 401 DGNVVY-KDGEALIHTDGTGFI 421


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  326 bits (836), Expect(2) = 1e-90
 Identities = 170/274 (62%), Positives = 212/274 (77%), Gaps = 7/274 (2%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSE-----PPLLIQIRLFYNG 316
            EDLA KCP  ++K K     + E+ +       N S++ ++E     PPLL+Q+RLFYNG
Sbjct: 421  EDLALKCPTYVYKEKCTNDDSTERSIDRKELEANFSDVARTESHYGEPPLLMQVRLFYNG 480

Query: 317  NAVKGTLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHL 496
             AVKGTLL+N+KLPP+TI  R SMIKV+ D +LS  QT NSLE+V  SNQP++TYLSR+L
Sbjct: 481  TAVKGTLLLNKKLPPQTIQIRPSMIKVKADRDLSDGQTFNSLEVVKTSNQPRKTYLSRNL 540

Query: 497  IALLSYGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMD-DFTVARMLLSGIP 673
            IALLSYGGVP+ +F+ IL NAL+D R   SNKR AL+V   YG MD DFT ARM+LSGI 
Sbjct: 541  IALLSYGGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMILSGIS 600

Query: 674  IDEPFLQHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLIS- 850
            +DEP+LQHRLSILMKEE+K L+ G+LPV+E YYLMGT DPTG+L+S++VCIIL +G +S 
Sbjct: 601  LDEPYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSW 660

Query: 851  GKVLVYKHPGLHFGDIHVLNATYVKAMEDFVGNA 952
             KVLVY++PGLHFGDIHVL ATYVK +EDFVG +
Sbjct: 661  EKVLVYRNPGLHFGDIHVLKATYVKELEDFVGTS 694



 Score = 35.8 bits (81), Expect(2) = 1e-90
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +1

Query: 82  NGHIVYSEDGEPLIHTDGTGFI 147
           +G++VY +DGE LIHTDGTGFI
Sbjct: 399 DGNVVY-KDGEALIHTDGTGFI 419


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  323 bits (829), Expect(2) = 4e-90
 Identities = 166/276 (60%), Positives = 209/276 (75%), Gaps = 9/276 (3%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKF---------LGNAVHRENISELQKSEPPLLIQIRL 304
            EDLA +CP N+FKG+    A+ +             N   +  +  L+  EPPLLIQ RL
Sbjct: 464  EDLALECPMNVFKGQAKHDADLKAIWQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRL 523

Query: 305  FYNGNAVKGTLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYL 484
            FYNG AVKGT L+N++LPPRTI  R SMIKVE D +L + +T NSLE+VG SN PK+T+L
Sbjct: 524  FYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFL 583

Query: 485  SRHLIALLSYGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLS 664
            SR+LIALL+YGGVP++YF+ IL++AL+DV+   S+KRAALRV +  GEMDDF VARM+L+
Sbjct: 584  SRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMILA 643

Query: 665  GIPIDEPFLQHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGL 844
            GIP+DE +LQ+RLS+L+KEE+K LK GRL V ECYYLMGT DPT  LES +VC+IL NG 
Sbjct: 644  GIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILYNGQ 703

Query: 845  ISGKVLVYKHPGLHFGDIHVLNATYVKAMEDFVGNA 952
            I+GKVLVY++PGLHFGDIHVL A YV+ +   VGNA
Sbjct: 704  INGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNA 739



 Score = 36.6 bits (83), Expect(2) = 4e-90
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 58  GSCTFKGDNGHIVYSEDGEPLIHTDGTGFI 147
           G    K   G+++Y  DG+PLIHTDGTGFI
Sbjct: 434 GDIPCKDIYGNVIY-RDGKPLIHTDGTGFI 462


>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
            gi|557110064|gb|ESQ50361.1| hypothetical protein
            EUTSA_v10001897mg [Eutrema salsugineum]
          Length = 988

 Score =  310 bits (794), Expect(2) = 4e-84
 Identities = 154/267 (57%), Positives = 199/267 (74%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA+ CP N+FKGK              + ++NI E    +PPLLIQ R+FY+GNAVKG
Sbjct: 419  EDLARMCPVNIFKGK-------------CLSKKNIQESCGQDPPLLIQFRMFYDGNAVKG 465

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            T L+N+KLP RT+  R SMIKV  D  LS+  T NSLE+V  SN PK+T LSR+L+ALLS
Sbjct: 466  TFLLNKKLPDRTVQVRPSMIKVSKDRALSNFSTFNSLEVVTTSNPPKRTKLSRNLVALLS 525

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGGVP ++F+ +LLN +E+ +   +NKRAAL+  L +G+MDD   A+M+L GIP+DEP L
Sbjct: 526  YGGVPNEFFLDLLLNTMEETKTIFNNKRAALKAALNHGDMDDQNAAQMILVGIPLDEPHL 585

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
            + RLSIL   E+  LK GRLPV+E YYLMGT DPTG L+ D+VC+IL++G ISG VLVY+
Sbjct: 586  KDRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGDVLVYR 645

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            +PG+HFGDIHVL ATYVKA+E++VGN+
Sbjct: 646  NPGVHFGDIHVLKATYVKALEEYVGNS 672



 Score = 30.0 bits (66), Expect(2) = 4e-84
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 37  HCHVSPHGSCTFKGDNGHIVYSEDGEPLIHTDGTGFI 147
           HCH            N ++V  ++ EP +H+DGTG+I
Sbjct: 391 HCH----------DQNNNVVLDKNKEPRMHSDGTGYI 417


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  311 bits (797), Expect(2) = 1e-83
 Identities = 154/267 (57%), Positives = 199/267 (74%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA+ CP N+FKGK              +  ENI E    +PPLLIQ R+FY+G AVKG
Sbjct: 411  EDLARMCPLNIFKGK-------------CLRSENIQEACNQDPPLLIQFRMFYDGYAVKG 457

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            T L+N+KL PRT+  R SMIKV  D +LS+  T N+LE+V  SN P++T LS++L+ALLS
Sbjct: 458  TFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPRRTKLSKNLVALLS 517

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGG+P ++F+ ILLN LE+ +    NK AAL V L YGEMDD   A+M+L GIP+DEP L
Sbjct: 518  YGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMDDQNAAQMILVGIPLDEPHL 577

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
            ++ LSIL+K E+  LK GRLPV+E YYLMGT DPTG L+ D+VC+IL++G ISG+VLVY+
Sbjct: 578  KNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYR 637

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            +PGLHFGDIH+L ATYVKA+E++VGN+
Sbjct: 638  NPGLHFGDIHILKATYVKALEEYVGNS 664



 Score = 27.3 bits (59), Expect(2) = 1e-83
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 37  HCHVSPHGSCTFKGDNGHIVYSEDGEPLIHTDGTGFI 147
           HCH            +G  V  ++ +P IH+DGTG+I
Sbjct: 383 HCH----------DQDGKDVLDKNKKPCIHSDGTGYI 409


>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
            gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 5;
            Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
            5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
            polymerase 5 [Arabidopsis thaliana]
          Length = 977

 Score =  309 bits (791), Expect(2) = 5e-83
 Identities = 153/267 (57%), Positives = 199/267 (74%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA+ CP N+FKGK              +  E+I E    +PPLLIQ R+FY+G AVKG
Sbjct: 407  EDLARMCPLNIFKGK-------------CLRSESIQEACYQDPPLLIQFRMFYDGYAVKG 453

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            T L+N+KL PRT+  R SMIKV  D +LS+  T N+LE+V  SN PK+T LS++L+ALLS
Sbjct: 454  TFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLS 513

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGG+P ++F+ ILLN LE+ +    NKRAAL   L YGEMDD   A+M+L GIP+DEP L
Sbjct: 514  YGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGIPLDEPHL 573

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
            ++ LSIL+K E+  LK G+LPV+E YYLMGT DPTG L+ D+VC+IL++G ISG+VLVY+
Sbjct: 574  KNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVLVYR 633

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            +PGLHFGDIH+L ATYVKA+E++VGN+
Sbjct: 634  NPGLHFGDIHILKATYVKALEEYVGNS 660



 Score = 27.3 bits (59), Expect(2) = 5e-83
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 37  HCHVSPHGSCTFKGDNGHIVYSEDGEPLIHTDGTGFI 147
           HCH            +G  V  ++ +P IH+DGTG+I
Sbjct: 379 HCH----------DQDGKDVLDKNKKPCIHSDGTGYI 405


>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            tuberosum]
          Length = 911

 Score =  293 bits (751), Expect(2) = 2e-82
 Identities = 151/272 (55%), Positives = 204/272 (75%), Gaps = 5/272 (1%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLG----NAVHRENISELQKSEPPLLIQIRLFYNGN 319
            EDLA  CPK+  K +++   NYE F+     +A  RE++S     EPPLL+Q RLF+NG 
Sbjct: 427  EDLAMHCPKDFVKAEYIKDENYENFVDIVDLDAERRESVS--WNREPPLLMQCRLFFNGC 484

Query: 320  AVKGTLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLI 499
            AVKGT LVN+K+  R IH R SM+KVE D  +S + T +SLEIV  S++P + YLS++LI
Sbjct: 485  AVKGTFLVNRKIGSRKIHIRPSMVKVEIDPAISSIPTFDSLEIVAISHRPNKAYLSKNLI 544

Query: 500  ALLSYGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTV-ARMLLSGIPI 676
            +LLSYGGV K+YF+ +L +ALE+ +  +  KRAAL+V + Y EMDD  + ARM+ SGIP+
Sbjct: 545  SLLSYGGVQKEYFMELLGSALEETKQVYLRKRAALKVVINYREMDDDCLTARMISSGIPL 604

Query: 677  DEPFLQHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGK 856
            +EP L+ RLS L K ER  L+GG+LP+S+ +YLMGTADPTG+LES++VC+ILDNG ISG+
Sbjct: 605  NEPHLRARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDNGQISGR 664

Query: 857  VLVYKHPGLHFGDIHVLNATYVKAMEDFVGNA 952
            VLVY++PGLHFGD+HV+ A YV+ + D VG+A
Sbjct: 665  VLVYRNPGLHFGDVHVMKARYVEELADVVGDA 696



 Score = 40.8 bits (94), Expect(2) = 2e-82
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +1

Query: 73  KGDNGHIVYSEDGEPLIHTDGTGFI 147
           + +NG I+  EDGEP IHTDGTGFI
Sbjct: 401 RDENGCIIKDEDGEPRIHTDGTGFI 425


>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
            gi|482565607|gb|EOA29796.1| hypothetical protein
            CARUB_v10012890mg [Capsella rubella]
          Length = 998

 Score =  296 bits (759), Expect(2) = 1e-80
 Identities = 150/267 (56%), Positives = 189/267 (70%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA+ CP N+FKGK + + N +   G              +PPLLIQ R+FY G AVKG
Sbjct: 424  EDLARMCPINIFKGKSIRSNNIKGTCGE-------------DPPLLIQFRMFYKGYAVKG 470

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            T L N+KLPP+T+  R SMIKV  D  L +  T NSLE+V  SN PK T LSR+LIALLS
Sbjct: 471  TFLSNKKLPPQTVQVRPSMIKVYEDQALLNFSTFNSLEVVNTSNPPKMTRLSRNLIALLS 530

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGGVP D+F+ IL   LE+ +    ++RAA++  + YG+MDD   A M+L  IP+DEP L
Sbjct: 531  YGGVPNDFFLNILRKTLEESKTIFYSERAAIKAAINYGDMDDQNTAEMILVDIPLDEPHL 590

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
            + RLSIL+K E+  LK GRLP+ E YYLMGT DPTG L+ ++VC+IL+ G ISG VLVY+
Sbjct: 591  KDRLSILLKTEKNALKEGRLPIGESYYLMGTVDPTGELKENEVCVILETGQISGNVLVYR 650

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            +PGLHFGDIHVL ATYVKA+ED+VGN+
Sbjct: 651  NPGLHFGDIHVLKATYVKALEDYVGNS 677



 Score = 31.6 bits (70), Expect(2) = 1e-80
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 37  HCHVSPHGSCTFKGDNGHIVYSEDGEPLIHTDGTGFI 147
           HCH            + H V  ++G+P IH+DGTG+I
Sbjct: 396 HCH----------DQDNHDVLDKNGKPCIHSDGTGYI 422


>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
            gi|557110063|gb|ESQ50360.1| hypothetical protein
            EUTSA_v10001896mg [Eutrema salsugineum]
          Length = 988

 Score =  296 bits (757), Expect(2) = 3e-79
 Identities = 149/264 (56%), Positives = 191/264 (72%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA+ CP ++FKGK +G  N +  + N   +    +    EPPLLIQ R+FY+G AVKG
Sbjct: 392  EDLARMCPTDIFKGKCIGIDNIQSKIPNVEAQGTCGK----EPPLLIQFRMFYDGYAVKG 447

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            T L+N+KLP RT+  R SMIKV  D  LS+  T NSLE+V  SN P +T LSR+L+ALLS
Sbjct: 448  TFLLNKKLPDRTVQVRPSMIKVYNDQTLSNFSTFNSLEVVNTSNPPNRTKLSRNLVALLS 507

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGGVP D+F+ IL N LE+ +    NKR+AL+  L YG+MDD   A+M+L GIP+DEP L
Sbjct: 508  YGGVPNDFFLDILRNTLENSKTIFQNKRSALKAALNYGDMDDQNAAQMILVGIPLDEPHL 567

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
            +  LSIL+  E+  LK GRLPV+E YYLMGT DPT  L+ ++VC+IL++G ISG VLVY 
Sbjct: 568  KDHLSILLHTEKNDLKAGRLPVTESYYLMGTVDPTRKLKENEVCVILESGQISGDVLVYM 627

Query: 872  HPGLHFGDIHVLNATYVKAMEDFV 943
            +PGLHFGDIHVL A YVKA+E++V
Sbjct: 628  NPGLHFGDIHVLKAKYVKALEEYV 651



 Score = 28.1 bits (61), Expect(2) = 3e-79
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 37  HCHVSPHGSCTFKGDNGHIVYSEDGEPLIHTDGTGFI 147
           HCH   + +          V  + G+P IH+DGTG+I
Sbjct: 364 HCHDQENNN----------VLDKHGKPCIHSDGTGYI 390


>ref|XP_007152979.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus vulgaris]
            gi|561026288|gb|ESW24973.1| hypothetical protein
            PHAVU_004G1764001g, partial [Phaseolus vulgaris]
          Length = 689

 Score =  295 bits (754), Expect(2) = 3e-79
 Identities = 151/273 (55%), Positives = 202/273 (73%), Gaps = 8/273 (2%)
 Frame = +2

Query: 155  DLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISE--------LQKSEPPLLIQIRLFY 310
            DLA  CP ++ KG ++   NY + + N +  E++ +        L   +PPLLIQ RLF+
Sbjct: 383  DLALLCPNSVCKGNNLEN-NYIQEINNLLELEDMCKEMGETELKLTTHQPPLLIQCRLFH 441

Query: 311  NGNAVKGTLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSR 490
             G+A+KGTLLVN+KLPPRTIH R SMIKVETDL+L+ +Q++NSLEIV  S +P +TYLS+
Sbjct: 442  MGSAIKGTLLVNKKLPPRTIHVRPSMIKVETDLSLN-MQSINSLEIVNTSIKPNRTYLSK 500

Query: 491  HLIALLSYGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGI 670
            +LIALLSYGGVP ++F  +L + LE+     SNKR ALR  + +G MD++  A M+L GI
Sbjct: 501  NLIALLSYGGVPNEFFKSLLESNLEEANHVFSNKRVALRASVNHGNMDEYNAAGMILCGI 560

Query: 671  PIDEPFLQHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLIS 850
            P DEPFLQ+RLSIL +EE+K L+GG+L + +C+YLMGT DPTG LE  QVCII  NG I+
Sbjct: 561  PQDEPFLQYRLSILAREEKKKLRGGKLYIPDCFYLMGTVDPTGCLEKGQVCIIHQNGQIT 620

Query: 851  GKVLVYKHPGLHFGDIHVLNATYVKAMEDFVGN 949
            G VLVY++PGLHFGDIH++ AT V+ +E +VG+
Sbjct: 621  GDVLVYRNPGLHFGDIHIMCATRVEELESYVGH 653



 Score = 29.3 bits (64), Expect(2) = 3e-79
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 79  DNGHIVYSEDGEPLIHTDGTGFI 147
           +NG+I+Y  + +P I TDGTGFI
Sbjct: 359 ENGNIIYDNE-KPRILTDGTGFI 380


>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
            gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 3;
            Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
            3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
            polymerase 3 [Arabidopsis thaliana]
          Length = 992

 Score =  295 bits (756), Expect(2) = 3e-79
 Identities = 151/267 (56%), Positives = 192/267 (71%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA+ CP N+FKGK + + N +    N   +    +    EPPLLIQ R+FYNG AVKG
Sbjct: 411  EDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCGQ----EPPLLIQFRIFYNGYAVKG 466

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            T L N+KLPPRT+  R SMIKV  D  LS+L T NSLE+V  SN P++  LSR+L+ALLS
Sbjct: 467  TFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLS 526

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGGVP D+F+ IL N LE+ +    ++RAA +  + YG  DD   A M+L GIP+DEP+L
Sbjct: 527  YGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG--DDQYTADMILVGIPLDEPYL 584

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
            + RLS L+K ER  LK GR P+ E YY+MGT DPTG L+ +++C+IL +G ISG VLVY+
Sbjct: 585  KDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYR 644

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            +PGLHFGDIHVL ATYVKA+ED+VGNA
Sbjct: 645  NPGLHFGDIHVLKATYVKALEDYVGNA 671



 Score = 28.1 bits (61), Expect(2) = 3e-79
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +1

Query: 94  VYSEDGEPLIHTDGTGFI 147
           V  ++G+P IH+DGTG+I
Sbjct: 392 VLDKNGKPCIHSDGTGYI 409


>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
          Length = 966

 Score =  295 bits (756), Expect(2) = 3e-79
 Identities = 151/267 (56%), Positives = 192/267 (71%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLA+ CP N+FKGK + + N +    N   +    +    EPPLLIQ R+FYNG AVKG
Sbjct: 385  EDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCGQ----EPPLLIQFRIFYNGYAVKG 440

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            T L N+KLPPRT+  R SMIKV  D  LS+L T NSLE+V  SN P++  LSR+L+ALLS
Sbjct: 441  TFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLS 500

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGGVP D+F+ IL N LE+ +    ++RAA +  + YG  DD   A M+L GIP+DEP+L
Sbjct: 501  YGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG--DDQYTADMILVGIPLDEPYL 558

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
            + RLS L+K ER  LK GR P+ E YY+MGT DPTG L+ +++C+IL +G ISG VLVY+
Sbjct: 559  KDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYR 618

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            +PGLHFGDIHVL ATYVKA+ED+VGNA
Sbjct: 619  NPGLHFGDIHVLKATYVKALEDYVGNA 645



 Score = 28.1 bits (61), Expect(2) = 3e-79
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +1

Query: 94  VYSEDGEPLIHTDGTGFI 147
           V  ++G+P IH+DGTG+I
Sbjct: 366 VLDKNGKPCIHSDGTGYI 383


>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
            gi|482565615|gb|EOA29804.1| hypothetical protein
            CARUB_v10012898mg [Capsella rubella]
          Length = 982

 Score =  296 bits (757), Expect(2) = 1e-78
 Identities = 150/267 (56%), Positives = 194/267 (72%)
 Frame = +2

Query: 152  EDLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENISELQKSEPPLLIQIRLFYNGNAVKG 331
            EDLAQ CP N++KGK              +  + I E    EPPLLIQ R+FYNG A+KG
Sbjct: 415  EDLAQMCPVNIYKGK-------------CLRSDKIKEACGQEPPLLIQFRMFYNGYAIKG 461

Query: 332  TLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRHLIALLS 511
            T L+N+K+P RT+  R SMIKV  D +L ++ T N+LE+V  S  PK+T LSR+L+ALLS
Sbjct: 462  TFLLNKKIPSRTVQVRPSMIKVLPD-SLPNISTFNTLEVVNTSFPPKRTKLSRNLVALLS 520

Query: 512  YGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIPIDEPFL 691
            YGG+P ++F+ IL N LE+ +    NKRAAL   L YGEMDD   A+M+L+GIP+DEP L
Sbjct: 521  YGGIPDEFFLDILHNTLEESKAIFYNKRAALNAALSYGEMDDQNAAQMILAGIPLDEPHL 580

Query: 692  QHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISGKVLVYK 871
            +  LS  +K E+  LK GRLPV+E YYLMGT DPTG L+ D+VC+IL++G ISG+VLVY+
Sbjct: 581  KTCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYR 640

Query: 872  HPGLHFGDIHVLNATYVKAMEDFVGNA 952
            +PGLHFGDIHVL ATYVKA+E++VGN+
Sbjct: 641  NPGLHFGDIHVLKATYVKALEEYVGNS 667



 Score = 25.8 bits (55), Expect(2) = 1e-78
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 82  NGHIVYSEDGEPLIHTDGTGFI 147
           +G  V  ++ +P IH+DGTG+I
Sbjct: 392 DGKDVLDKNKKPRIHSDGTGYI 413


>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 988

 Score =  296 bits (757), Expect(2) = 2e-78
 Identities = 148/273 (54%), Positives = 203/273 (74%), Gaps = 7/273 (2%)
 Frame = +2

Query: 155  DLAQKCPKNLFKGKHVGTANYEKFLGNAVHRENIS-------ELQKSEPPLLIQIRLFYN 313
            DLA  CP N++KG ++   N  + + N V  E++S       +L   EPPLLIQ RLF+ 
Sbjct: 398  DLALLCPNNVYKGSNLEN-NCIQEINNLVELEDMSNAMGEAEQLSTHEPPLLIQCRLFHM 456

Query: 314  GNAVKGTLLVNQKLPPRTIHYRHSMIKVETDLNLSHLQTVNSLEIVGRSNQPKQTYLSRH 493
            G+A+KGTLLVN+KLPPRTI  R SMIKVE D ++ H+Q++NSLE+V  SN+PK+ YLS+H
Sbjct: 457  GHAIKGTLLVNRKLPPRTIQVRPSMIKVEKDPSV-HMQSINSLEVVTTSNKPKRGYLSKH 515

Query: 494  LIALLSYGGVPKDYFVGILLNALEDVRDAHSNKRAALRVFLRYGEMDDFTVARMLLSGIP 673
            LIALLS+GGVP ++F+ +L + +ED    +SNKR+ALR  +  GE D++  A M+L GIP
Sbjct: 516  LIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALRASINCGEKDEYNAAEMILCGIP 575

Query: 674  IDEPFLQHRLSILMKEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGLISG 853
            +DEPFL+H LS   +EE+K L+GG+L + +C+YLMGT DPTG L+ +QVCII +N  I G
Sbjct: 576  LDEPFLKHHLSRFAREEKKKLRGGKLYMPDCFYLMGTVDPTGHLKKNQVCIIHENSQIVG 635

Query: 854  KVLVYKHPGLHFGDIHVLNATYVKAMEDFVGNA 952
             VLVY++PGLHFGDIH ++ATYVK +E +VG++
Sbjct: 636  DVLVYRNPGLHFGDIHKMDATYVKELESYVGHS 668



 Score = 25.4 bits (54), Expect(2) = 2e-78
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 73  KGDNGHIVYSEDGEPLIHTDGTGFI 147
           K  NG+I+   + +P I TDGTGFI
Sbjct: 372 KDANGNIMVDNE-KPRILTDGTGFI 395