BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00009230
         (1028 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   470   e-130
ref|XP_007041228.1| Pseudouridine synthase family protein isofor...   461   e-127
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   458   e-126
ref|XP_007041230.1| Pseudouridine synthase family protein isofor...   456   e-126
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   452   e-124
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   452   e-124
gb|EYU26478.1| hypothetical protein MIMGU_mgv1a018737mg [Mimulus...   450   e-124
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr...   446   e-123
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   443   e-122
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   437   e-120
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   437   e-120
ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like ...   434   e-119
ref|XP_007148561.1| hypothetical protein PHAVU_006G218900g [Phas...   433   e-119
ref|XP_006471141.1| PREDICTED: tRNA pseudouridine synthase-like ...   430   e-118
ref|XP_007148560.1| hypothetical protein PHAVU_006G218900g [Phas...   430   e-118
ref|XP_006431657.1| hypothetical protein CICLE_v10001491mg [Citr...   429   e-118
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   429   e-117
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   427   e-117
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   426   e-117
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      426   e-116

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  470 bits (1210), Expect = e-130
 Identities = 235/326 (72%), Positives = 264/326 (80%), Gaps = 30/326 (9%)
 Frame = -2

Query: 985  MNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAG 806
            M QNPR+QRYLVA+EYIGTRF G Q+Q NCRTV GAL++AF+KFIG PVS+ CSSRTDAG
Sbjct: 55   MTQNPRVQRYLVAVEYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAG 114

Query: 805  VHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADF 626
            VHALSNVCHVDVERISKRKPGEVL PHEPAVVR+AVNHFL KNE GD+MVIDVRCVP DF
Sbjct: 115  VHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNE-GDVMVIDVRCVPPDF 173

Query: 625  HARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRA 446
            HARY+ARERTYFYRLLSG EPLSSFEKDRAWH+P+DLDL+++QKACRVLVG HDFSSFRA
Sbjct: 174  HARYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRA 233

Query: 445  AGCQAKSPIRNLDQLDVSEVVSTPFISNVDGNGSLNGETE-------------------- 326
            AGCQAKSPIR LD+L VSEV+ TP+  ++      N   E                    
Sbjct: 234  AGCQAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANH 293

Query: 325  ----------QGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKIL 176
                      QGFG+RRRHRC++VTAR RSFLYHQVRLLVGV+KCVGTG+L +SDVE+IL
Sbjct: 294  DRLDGFNGAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERIL 353

Query: 175  KAKSVSAASPMAPACGLYLGRVKYDL 98
             AK+V+AASPMAPACGLYLG V YDL
Sbjct: 354  NAKTVTAASPMAPACGLYLGNVNYDL 379


>ref|XP_007041228.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508705163|gb|EOX97059.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  461 bits (1186), Expect = e-127
 Identities = 236/330 (71%), Positives = 261/330 (79%), Gaps = 32/330 (9%)
 Frame = -2

Query: 991  SIMNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTD 812
            S M++NPRIQRYLVAIEYIGTRF G Q+QPNCRTVVG LE+AF KFIG PVS+ CSSRTD
Sbjct: 42   SSMSKNPRIQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTD 101

Query: 811  AGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPA 632
            AGVHALSNVCHVDVERISKRKPGEVL PHEP+VVR+AVNHFL K+E GD+ VIDVRCVP 
Sbjct: 102  AGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSE-GDITVIDVRCVPN 160

Query: 631  DFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSF 452
            DFHARY+A+ERTYFYRLLSG EPLS+FEK+RAWH+P+ LDL ++Q+AC+VLVG HDFSSF
Sbjct: 161  DFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFSSF 220

Query: 451  RAAGCQAKSPIRNLDQLDVSEVVSTPF--------------------------------I 368
            RAAGCQAKSPIR LD+L VSE   TP+                                 
Sbjct: 221  RAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPIDSF 280

Query: 367  SNVDGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDV 188
            SN D     NG T+ GFGIRRRH CYVVTAR RSFLYHQVRLLVGVLKCVGTGEL  SDV
Sbjct: 281  SNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDV 340

Query: 187  EKILKAKSVSAASPMAPACGLYLGRVKYDL 98
            E+IL AK+V+AASPMAPA GLYLG VKYDL
Sbjct: 341  ERILNAKTVTAASPMAPAYGLYLGCVKYDL 370


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
           subsp. vesca]
          Length = 350

 Score =  458 bits (1179), Expect = e-126
 Identities = 226/316 (71%), Positives = 265/316 (83%), Gaps = 20/316 (6%)
 Frame = -2

Query: 985 MNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAG 806
           M++   IQRYL+AIEYIGTRF G Q+Q NCRTVVG LE+AF KFIG PVS+ CSSRTDAG
Sbjct: 35  MSKPQGIQRYLIAIEYIGTRFSGSQQQSNCRTVVGVLEEAFRKFIGQPVSIFCSSRTDAG 94

Query: 805 VHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADF 626
           VHALSNVCHVD+ERISKRKPGEVL PHEP VV++AVNHFL KNE GD+MV+DVR VPADF
Sbjct: 95  VHALSNVCHVDIERISKRKPGEVLPPHEPIVVQRAVNHFLQKNE-GDVMVVDVRSVPADF 153

Query: 625 HARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRA 446
           HAR++A+ERTYFYRLLSG EPLS+FEKDRAWHIP++LD++++Q+AC++LVG HDFSSFRA
Sbjct: 154 HARFKAQERTYFYRLLSGPEPLSTFEKDRAWHIPEELDVLAMQEACKILVGHHDFSSFRA 213

Query: 445 AGCQAKSPIRNLDQLDVSEVVSTPFISNV--------------------DGNGSLNGETE 326
           AGCQAKSPIR LD+L+VSEVVS+P    +                    D + S NG T+
Sbjct: 214 AGCQAKSPIRTLDELNVSEVVSSPNFPTIAERTRNLVQKDIQCTNNPEADCHSSFNGGTD 273

Query: 325 QGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASP 146
           QGFG+R++HRC VVTAR R+FLYHQVRLLVGVLKCVGTG+LKI DVE+IL AK+V+AASP
Sbjct: 274 QGFGLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLKIPDVERILNAKTVTAASP 333

Query: 145 MAPACGLYLGRVKYDL 98
           MAPACGLYLG V+YDL
Sbjct: 334 MAPACGLYLGHVRYDL 349


>ref|XP_007041230.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
            gi|508705165|gb|EOX97061.1| Pseudouridine synthase family
            protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  456 bits (1174), Expect = e-126
 Identities = 234/330 (70%), Positives = 258/330 (78%), Gaps = 32/330 (9%)
 Frame = -2

Query: 991  SIMNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTD 812
            S M++NPRIQRYLVAIEYIGTRF G Q+QPNCRTVVG LE+AF KFIG PVS+ CSSRTD
Sbjct: 42   SSMSKNPRIQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTD 101

Query: 811  AGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPA 632
            AGVHALSNVCHVDVERISKRKPGEVL PHEP+VVR+AVNHFL     GD+ VIDVRCVP 
Sbjct: 102  AGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQSE--GDITVIDVRCVPN 159

Query: 631  DFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSF 452
            DFHARY+A+ERTYFYRLLSG EPLS+FEK+RAWH+P+ LDL ++Q+AC+VLVG HDFSSF
Sbjct: 160  DFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFSSF 219

Query: 451  RAAGCQAKSPIRNLDQLDVSEVVSTPF--------------------------------I 368
            RAAGCQAKSPIR LD+L VSE   TP+                                 
Sbjct: 220  RAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLPIDSF 279

Query: 367  SNVDGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDV 188
            SN D     NG T+ GFGIRRRH CYVVTAR RSFLYHQVRLLVGVLKCVGTGEL  SDV
Sbjct: 280  SNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDV 339

Query: 187  EKILKAKSVSAASPMAPACGLYLGRVKYDL 98
            E+IL AK+V+AASPMAPA GLYLG VKYDL
Sbjct: 340  ERILNAKTVTAASPMAPAYGLYLGCVKYDL 369


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
            tuberosum]
          Length = 389

 Score =  452 bits (1163), Expect = e-124
 Identities = 228/328 (69%), Positives = 261/328 (79%), Gaps = 32/328 (9%)
 Frame = -2

Query: 985  MNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAG 806
            MN NPR+QRYL+AIEYIGTRF G Q+QPNCRTVVG L++AF KF+G PVSV CSSRTDAG
Sbjct: 56   MNPNPRLQRYLIAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQPVSVFCSSRTDAG 115

Query: 805  VHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADF 626
            VHALSNVCHVDVERISKRKPG+VL PHEP VV++AVNHFL KNE GD+MVIDVRCVPADF
Sbjct: 116  VHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNE-GDIMVIDVRCVPADF 174

Query: 625  HARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRA 446
            HARY+A+ERTYFYRLLSG E +SSFE+DRAWH+P++LDL+++QKAC +L+GRHDFSSFRA
Sbjct: 175  HARYKAQERTYFYRLLSGPESVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRA 234

Query: 445  AGCQAKSPIRNLDQLDVSEVVSTPFISNV-------------------DGNGS------- 344
            A CQA SPIR LD+L+V EVVSTPF  ++                   D N S       
Sbjct: 235  AACQANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVSLGSDTNHSQISLNTN 294

Query: 343  ------LNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEK 182
                   NGE  Q FG+RRRHRC+VVTAR RSFLYHQVRLLVGVLK VG G L   DV++
Sbjct: 295  EEKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGVLTDPDVKR 354

Query: 181  ILKAKSVSAASPMAPACGLYLGRVKYDL 98
            IL+AKS++AA PMAPACGLYLG VKYDL
Sbjct: 355  ILEAKSITAAPPMAPACGLYLGHVKYDL 382


>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 389

 Score =  452 bits (1163), Expect = e-124
 Identities = 227/328 (69%), Positives = 260/328 (79%), Gaps = 32/328 (9%)
 Frame = -2

Query: 985  MNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAG 806
            MN NPR+QRYL+AIEYIGTRF G Q+QPNCRTVVG L++AF KFIG PVSV CSSRTDAG
Sbjct: 56   MNPNPRLQRYLLAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFIGQPVSVFCSSRTDAG 115

Query: 805  VHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADF 626
            VHALSNVCHVDVERISKRKPG+VL PHEP VV++AVNHFL KN  GD+MVIDVRCVP DF
Sbjct: 116  VHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKN-AGDIMVIDVRCVPDDF 174

Query: 625  HARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRA 446
            HARY+A+ERTYFYRLLSG EP+SSFE+DRAWH+P++LDL+++QKAC +L+GRHDFSSFRA
Sbjct: 175  HARYKAQERTYFYRLLSGPEPVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRA 234

Query: 445  AGCQAKSPIRNLDQLDVSEVVSTPFISNVD-----------------------------G 353
            A CQA SPIR LD+L+V EVVSTPF  ++                               
Sbjct: 235  AACQANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVYLGSDTNHSQISFNTN 294

Query: 352  NGSL---NGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEK 182
             G L   NGE  Q FG+RRRHRC+VVTAR RSFLYHQVRLLVGVLK VG G+L   DV++
Sbjct: 295  EGKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGDLTDPDVKR 354

Query: 181  ILKAKSVSAASPMAPACGLYLGRVKYDL 98
            IL+AKS++AA PMAPACGLYLG VKYDL
Sbjct: 355  ILEAKSIAAAPPMAPACGLYLGHVKYDL 382


>gb|EYU26478.1| hypothetical protein MIMGU_mgv1a018737mg [Mimulus guttatus]
          Length = 374

 Score =  450 bits (1157), Expect = e-124
 Identities = 227/319 (71%), Positives = 260/319 (81%), Gaps = 23/319 (7%)
 Frame = -2

Query: 985  MNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAG 806
            M  NPRIQRYLVAIEY+GTRF G Q+QP  RTVVG LEDAF KFIG PVS+ CSSRTDAG
Sbjct: 53   MVPNPRIQRYLVAIEYLGTRFSGAQQQPTGRTVVGVLEDAFQKFIGQPVSIFCSSRTDAG 112

Query: 805  VHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADF 626
            VHALSNVCHVD+ER SKRKPGEVL PHEP+VV+ AVNHFL KNE GD+MVIDV+CVPADF
Sbjct: 113  VHALSNVCHVDIERTSKRKPGEVLPPHEPSVVKSAVNHFLQKNE-GDMMVIDVKCVPADF 171

Query: 625  HARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRA 446
            H+RY+A+ERTYFYRLLSG EPLS+FEK+RAWH+P++LD++S+QKAC+VL+GRHDFSSFRA
Sbjct: 172  HSRYKAQERTYFYRLLSGMEPLSTFEKNRAWHVPEELDILSMQKACQVLIGRHDFSSFRA 231

Query: 445  AGCQAKSPIRNLDQLDVSEVVSTPF-------------------ISNVDGNGSLN----G 335
            + CQAKSPI+ LD+L V+EV S  +                   ISN     S+N    G
Sbjct: 232  SACQAKSPIKTLDELSVTEVASGTYFPSPAERKQSNYTTEGLVSISNKSETDSVNGNSVG 291

Query: 334  ETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSA 155
            E  QGFGIR+RHRC VVTARGRSFLYHQVRLLVGVLK VGTG+L +SDVE+ILKAK +  
Sbjct: 292  EAIQGFGIRKRHRCIVVTARGRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILKAKDIRT 351

Query: 154  ASPMAPACGLYLGRVKYDL 98
            ASPMAPA GLYLG+VKYDL
Sbjct: 352  ASPMAPAGGLYLGQVKYDL 370


>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
           gi|557095305|gb|ESQ35887.1| hypothetical protein
           EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  446 bits (1148), Expect = e-123
 Identities = 223/316 (70%), Positives = 261/316 (82%), Gaps = 21/316 (6%)
 Frame = -2

Query: 985 MNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAG 806
           ++ NPR+QRYLVAIEYIGTRF G Q+Q   RTVVG L++AF+KFIG PV + CSSRTDAG
Sbjct: 52  LSMNPRVQRYLVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAG 111

Query: 805 VHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADF 626
           VHALSNVCHVDVERISKRKPGEVL PHEP VV++AVNHFL +N+G D+MVIDVRCVP+++
Sbjct: 112 VHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDG-DVMVIDVRCVPSNY 170

Query: 625 HARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRA 446
           HARY+ARERTYFYRLLSG +PLS  EKDRAWH+P++LDL S+Q+ACRVLVG HDFSSFRA
Sbjct: 171 HARYKARERTYFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLVGTHDFSSFRA 230

Query: 445 AGCQAKSPIRNLDQLDVSEVVSTPFISNVD-------GNG-----SLNGETEQG------ 320
           AGCQAKSPIR+LD+L+V+EV STP+  ++         NG     S   +TE        
Sbjct: 231 AGCQAKSPIRSLDELNVTEVPSTPYFPSITERTPSYLNNGDPLACSSQAKTETAGVSTDG 290

Query: 319 ---FGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAAS 149
              FG+RRRHRCYVVTARGR+FLYHQVRLLV  LKCVGTGEL +SDVE+ILKAK+V+AA 
Sbjct: 291 GDTFGVRRRHRCYVVTARGRAFLYHQVRLLVAALKCVGTGELTVSDVERILKAKTVTAAK 350

Query: 148 PMAPACGLYLGRVKYD 101
           PMAPACGLYL RVKY+
Sbjct: 351 PMAPACGLYLARVKYE 366


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  443 bits (1140), Expect = e-122
 Identities = 221/308 (71%), Positives = 252/308 (81%), Gaps = 12/308 (3%)
 Frame = -2

Query: 985 MNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAG 806
           MN  P IQRYLVA+EYIGTRF+G Q+QPNCRTVVGALE+AF KFIG PVSV CSSRTDAG
Sbjct: 41  MNPKPGIQRYLVAVEYIGTRFYGSQQQPNCRTVVGALEEAFQKFIGQPVSVFCSSRTDAG 100

Query: 805 VHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADF 626
           VHALSNVCHVDVERISKRKPGEVL PHEP VV KAVNHFL K+E GD+ V+DVR VP DF
Sbjct: 101 VHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKHE-GDVTVVDVRSVPNDF 159

Query: 625 HARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRA 446
           HARY+A+ERTYFYRL+SG E LSSFEKDRAWH+P+ L++ ++Q+AC+VLVG HDFSSFRA
Sbjct: 160 HARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQEACKVLVGHHDFSSFRA 219

Query: 445 AGCQAKSPIRNLDQLDVSEVVSTPFISNVDGNGSLNGETEQ------------GFGIRRR 302
           AGCQA SPIR LD+L+V EV STP+           G+ E             GFGIRRR
Sbjct: 220 AGCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQGKEESEIEVPCSETCEVGFGIRRR 279

Query: 301 HRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASPMAPACGLY 122
           HRC+VVTAR RSFLYHQVRL+VGVLK VG+G+L + DV +IL+AK+VS+A PMAPACGLY
Sbjct: 280 HRCFVVTARARSFLYHQVRLMVGVLKAVGSGDLTVGDVGRILEAKNVSSARPMAPACGLY 339

Query: 121 LGRVKYDL 98
           LG VKYDL
Sbjct: 340 LGHVKYDL 347


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  437 bits (1124), Expect = e-120
 Identities = 226/328 (68%), Positives = 257/328 (78%), Gaps = 32/328 (9%)
 Frame = -2

Query: 985  MNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTD 812
            M+QNPR  IQRYLVAIEYIGT F G QKQ N RTVVGALE+AF KF+G PVSVSCSSRTD
Sbjct: 40   MSQNPRNGIQRYLVAIEYIGTLFSGSQKQLNVRTVVGALEEAFSKFVGQPVSVSCSSRTD 99

Query: 811  AGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPA 632
            AGVHALSNVCHVD++RISKR+PGEVL PHEPAVV +AVNHFL K++  DLMVIDVRCVP+
Sbjct: 100  AGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDS-DLMVIDVRCVPS 158

Query: 631  DFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSF 452
            DFHAR++A+ERTYFYRLLSG EPLS+FEKDRAWH+P++L L ++Q+ACRVLVG HDFSSF
Sbjct: 159  DFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSF 218

Query: 451  RAAGCQAKSPIRNLDQLDVSEVVSTPF------------------------------ISN 362
            RAAGCQAKSPIR LD+L V+EV+ +P+                              ISN
Sbjct: 219  RAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIPPISN 278

Query: 361  VDGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEK 182
               +  +    + GFG RRRHRC VVTAR RSFLYHQVRLLVGVLK  GTG L I DVE+
Sbjct: 279  PSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVER 338

Query: 181  ILKAKSVSAASPMAPACGLYLGRVKYDL 98
            IL AK+V+AASPMAPACGLYLG VKYDL
Sbjct: 339  ILNAKTVTAASPMAPACGLYLGEVKYDL 366


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 372

 Score =  437 bits (1124), Expect = e-120
 Identities = 225/326 (69%), Positives = 257/326 (78%), Gaps = 30/326 (9%)
 Frame = -2

Query: 985  MNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAG 806
            M+ NP++QRYL+A+EYIGT+F G QKQ N RTVVG LE+AF KFIG  VSVS SSRTDAG
Sbjct: 47   MSSNPKLQRYLIAVEYIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAG 106

Query: 805  VHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADF 626
            VHALSNVCHVD+ERISKRKPGEVL PHEPAVVR+AVNHFL KNE GD+MV DVRCVP+DF
Sbjct: 107  VHALSNVCHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNE-GDIMVTDVRCVPSDF 165

Query: 625  HARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRA 446
            HAR++A+ERTYFYR LSG EPLS+FEKDRAWH+ +DLD+V++Q+AC+VLVG HDFSSFRA
Sbjct: 166  HARFKAQERTYFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRA 225

Query: 445  AGCQAKSPIRNLDQLDVSEVVSTPFI------------------------------SNVD 356
            +GCQAKSPIR L ++ VSEV ST +                               SN +
Sbjct: 226  SGCQAKSPIRTLAEISVSEVASTLYFPSITEREQNCENGENSCCKKFKTDLPMGSHSNTN 285

Query: 355  GNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKIL 176
               S  GET+ GFGIRRRHRC+VVTAR RSFLYHQVRLLVGVLK VG G+L  SDVE+IL
Sbjct: 286  VAESSFGETDLGFGIRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVERIL 345

Query: 175  KAKSVSAASPMAPACGLYLGRVKYDL 98
             AKSV+AASPMAPA GLYLG VKYDL
Sbjct: 346  SAKSVTAASPMAPARGLYLGHVKYDL 371


>ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X1
           [Citrus sinensis]
          Length = 383

 Score =  434 bits (1117), Expect = e-119
 Identities = 221/310 (71%), Positives = 258/310 (83%), Gaps = 13/310 (4%)
 Frame = -2

Query: 988 IMNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDA 809
           +M+ N RIQRYL+A+EYIGTRF G QKQ NCRTVVG LE+AF+KFIG PVS+S SSRTDA
Sbjct: 50  VMSTNKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDA 109

Query: 808 GVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPAD 629
           GVHA SNVCHVDVERISKRKPGEVL PH+ +VVR+AVNHFL K+E GD+MV DVRCVP+D
Sbjct: 110 GVHAASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQKSE-GDIMVTDVRCVPSD 168

Query: 628 FHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFR 449
           FHAR+ A+ERTYFYR+LSG EPLS FEKDRAWH+ ++LDL ++Q+AC+VLVG HDFSSFR
Sbjct: 169 FHARFRAQERTYFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFR 228

Query: 448 AAGCQAKSPIRNLDQLDVSEVVST----------PFISNVDGNGSL---NGETEQGFGIR 308
           A+GCQA SPIR LD+L VSEVVST          P +S++D +  L   NG +   FGIR
Sbjct: 229 ASGCQANSPIRTLDELHVSEVVSTALFPSINQDSPVLSSIDNSSKLGMPNGGSNV-FGIR 287

Query: 307 RRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASPMAPACG 128
           ++HR Y V AR RSFLYHQVRL+VGVLK VGTGEL +SDVE+ILKAK+V+AASPMAPACG
Sbjct: 288 KKHRSYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTAASPMAPACG 347

Query: 127 LYLGRVKYDL 98
           L LG VKYDL
Sbjct: 348 LSLGFVKYDL 357


>ref|XP_007148561.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
            gi|561021784|gb|ESW20555.1| hypothetical protein
            PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  433 bits (1114), Expect = e-119
 Identities = 227/328 (69%), Positives = 258/328 (78%), Gaps = 32/328 (9%)
 Frame = -2

Query: 985  MNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTD 812
            M QNPR  IQRY +AIEYIGTRF G QKQ  CRTVVGALE+AF KF+G PVSVSCSSRTD
Sbjct: 44   MTQNPRNGIQRYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSSRTD 103

Query: 811  AGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPA 632
            AGVHALSNVCHVD++R SKRKPGEVL PHEPAVV +AVNHFL K++  DL VIDVRCVP+
Sbjct: 104  AGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHD-SDLTVIDVRCVPS 162

Query: 631  DFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSF 452
            DFHARY+A ERTYFYRLLSG EPLS+FEKDRAWH+ ++L+L ++Q+ACRVLVG HDFSSF
Sbjct: 163  DFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFSSF 222

Query: 451  RAAGCQAKSPIRNLDQLDVSEVVST---PFISNVDGNGSL---------NGET------- 329
            RAAGCQAKSPIR LD+L+VSEV+ +   P + + +G+  +         N ET       
Sbjct: 223  RAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPSSS 282

Query: 328  -----------EQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEK 182
                       + GFG RRRHRC VVTAR RSFLYHQVRLLVGVLK VGTG L I DVE+
Sbjct: 283  PCIDKVTTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVER 342

Query: 181  ILKAKSVSAASPMAPACGLYLGRVKYDL 98
            IL AKSV++ASPMAPACGLYLG VKYDL
Sbjct: 343  ILNAKSVTSASPMAPACGLYLGEVKYDL 370


>ref|XP_006471141.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X2
           [Citrus sinensis]
          Length = 382

 Score =  430 bits (1105), Expect = e-118
 Identities = 219/310 (70%), Positives = 255/310 (82%), Gaps = 13/310 (4%)
 Frame = -2

Query: 988 IMNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDA 809
           +M+ N RIQRYL+A+EYIGTRF G QKQ NCRTVVG LE+AF+KFIG PVS+S SSRTDA
Sbjct: 50  VMSTNKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDA 109

Query: 808 GVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPAD 629
           GVHA SNVCHVDVERISKRKPGEVL PH+ +VVR+AVNHFL     GD+MV DVRCVP+D
Sbjct: 110 GVHAASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQSE--GDIMVTDVRCVPSD 167

Query: 628 FHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFR 449
           FHAR+ A+ERTYFYR+LSG EPLS FEKDRAWH+ ++LDL ++Q+AC+VLVG HDFSSFR
Sbjct: 168 FHARFRAQERTYFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFR 227

Query: 448 AAGCQAKSPIRNLDQLDVSEVVST----------PFISNVDGNGSL---NGETEQGFGIR 308
           A+GCQA SPIR LD+L VSEVVST          P +S++D +  L   NG +   FGIR
Sbjct: 228 ASGCQANSPIRTLDELHVSEVVSTALFPSINQDSPVLSSIDNSSKLGMPNGGSNV-FGIR 286

Query: 307 RRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASPMAPACG 128
           ++HR Y V AR RSFLYHQVRL+VGVLK VGTGEL +SDVE+ILKAK+V+AASPMAPACG
Sbjct: 287 KKHRSYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTAASPMAPACG 346

Query: 127 LYLGRVKYDL 98
           L LG VKYDL
Sbjct: 347 LSLGFVKYDL 356


>ref|XP_007148560.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
            gi|561021783|gb|ESW20554.1| hypothetical protein
            PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 372

 Score =  430 bits (1105), Expect = e-118
 Identities = 226/328 (68%), Positives = 256/328 (78%), Gaps = 32/328 (9%)
 Frame = -2

Query: 985  MNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTD 812
            M QNPR  IQRY +AIEYIGTRF G QKQ  CRTVVGALE+AF KF+G PVSVSCSSRTD
Sbjct: 44   MTQNPRNGIQRYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSSRTD 103

Query: 811  AGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPA 632
            AGVHALSNVCHVD++R SKRKPGEVL PHEPAVV +AVNHFL  +   DL VIDVRCVP+
Sbjct: 104  AGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQHDS--DLTVIDVRCVPS 161

Query: 631  DFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSF 452
            DFHARY+A ERTYFYRLLSG EPLS+FEKDRAWH+ ++L+L ++Q+ACRVLVG HDFSSF
Sbjct: 162  DFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFSSF 221

Query: 451  RAAGCQAKSPIRNLDQLDVSEVVST---PFISNVDGNGSL---------NGET------- 329
            RAAGCQAKSPIR LD+L+VSEV+ +   P + + +G+  +         N ET       
Sbjct: 222  RAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPSSS 281

Query: 328  -----------EQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEK 182
                       + GFG RRRHRC VVTAR RSFLYHQVRLLVGVLK VGTG L I DVE+
Sbjct: 282  PCIDKVTTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVER 341

Query: 181  ILKAKSVSAASPMAPACGLYLGRVKYDL 98
            IL AKSV++ASPMAPACGLYLG VKYDL
Sbjct: 342  ILNAKSVTSASPMAPACGLYLGEVKYDL 369


>ref|XP_006431657.1| hypothetical protein CICLE_v10001491mg [Citrus clementina]
           gi|557533779|gb|ESR44897.1| hypothetical protein
           CICLE_v10001491mg [Citrus clementina]
          Length = 382

 Score =  429 bits (1103), Expect = e-118
 Identities = 219/310 (70%), Positives = 255/310 (82%), Gaps = 13/310 (4%)
 Frame = -2

Query: 988 IMNQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDA 809
           +M+ N RIQRYL+A+EYIGTRF G QKQ NCRTVVG LE+AF+KFIG PVS+S SSRTDA
Sbjct: 50  VMSTNKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDA 109

Query: 808 GVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPAD 629
           GVHA SNVCHVDVERISKRKPGEVL PH+ +VVR+AVNHFL     GD+MV DVRCVP+D
Sbjct: 110 GVHAASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQSE--GDIMVTDVRCVPSD 167

Query: 628 FHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFR 449
           FHAR+ A+ERTYFYR+LSG EPLS FEKDRAWH+ ++LDL ++Q+AC+VLVG HDFSSFR
Sbjct: 168 FHARFRAQERTYFYRILSGPEPLSVFEKDRAWHVTEELDLHAMQEACKVLVGCHDFSSFR 227

Query: 448 AAGCQAKSPIRNLDQLDVSEVVST----------PFISNVDGN---GSLNGETEQGFGIR 308
           A+GCQA SPIR LD+L VSEVVST          P +S++D +   G  NG +   FGIR
Sbjct: 228 ASGCQANSPIRTLDELHVSEVVSTALFSSINQDSPVLSSIDNSIKLGMPNGGSNV-FGIR 286

Query: 307 RRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKSVSAASPMAPACG 128
           ++HR Y V AR RSFLYHQVRL+VGVLK VGTGEL +SDVE+ILKAK+V+AASPMAPACG
Sbjct: 287 KKHRSYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKTVTAASPMAPACG 346

Query: 127 LYLGRVKYDL 98
           L LG VKYDL
Sbjct: 347 LSLGFVKYDL 356


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
            gi|550312358|gb|ERP48449.1| hypothetical protein
            POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  429 bits (1102), Expect = e-117
 Identities = 220/326 (67%), Positives = 253/326 (77%), Gaps = 32/326 (9%)
 Frame = -2

Query: 982  NQNPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGV 803
            +  P +QRYLVA+EYIGTRF G Q+Q N RTVVG L++AF+KFIG PV++  SSRTDAGV
Sbjct: 44   SMKPGLQRYLVAVEYIGTRFCGSQQQLNHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGV 103

Query: 802  HALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFH 623
            HALSNVCHVDVERISKRKPGEVL PHEPAVVRKAVNHFL K E GD+MV DVR VPA FH
Sbjct: 104  HALSNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKE-GDIMVTDVRSVPAHFH 162

Query: 622  ARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAA 443
            AR++A+ERTYFYRLL G E LS+FEKDRAWH+ ++LDLVS+Q+AC+VLVG HDFSSFRA+
Sbjct: 163  ARFKAQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRAS 222

Query: 442  GCQAKSPIRNLDQLDVSEVVSTPF--------------------------------ISNV 359
            GCQAKSP R L++L V EVVSTP+                                ISN 
Sbjct: 223  GCQAKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLPTGSISNG 282

Query: 358  DGNGSLNGETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKI 179
               G  N  T+ GFGIRRRHRCYV+TAR RSFLYHQVRLLVGVLK VGTG+L +SDVE+I
Sbjct: 283  FMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERI 342

Query: 178  LKAKSVSAASPMAPACGLYLGRVKYD 101
            L A+S++AASPMAPACGLYLG VKY+
Sbjct: 343  LNARSITAASPMAPACGLYLGHVKYE 368


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
            gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  427 bits (1098), Expect = e-117
 Identities = 224/328 (68%), Positives = 257/328 (78%), Gaps = 32/328 (9%)
 Frame = -2

Query: 985  MNQNPR--IQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTD 812
            M +NPR  IQRYLVAIEYIGTRF G QKQ N RTVVG LE+AF KF+G PVSVSCSSRT 
Sbjct: 41   MIKNPRNGIQRYLVAIEYIGTRFSGSQKQLNVRTVVGVLEEAFSKFVGQPVSVSCSSRTV 100

Query: 811  AGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPA 632
            AGVHALSNVCHVD++RISKR+PGEVL PHEPAVV +AVNHFL K +  DLMVIDVRCVP+
Sbjct: 101  AGVHALSNVCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDS-DLMVIDVRCVPS 159

Query: 631  DFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSF 452
            DFHAR++A+ER YFYRLLSG EPLS+FEKDRAWH+P++L L ++Q+ACRVLVG HDFSSF
Sbjct: 160  DFHARFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHDFSSF 219

Query: 451  RAAGCQAKSPIRNLDQLDVSEVVSTPFISNV-------DGNGSL-----NGET------- 329
            RAAGCQAKSPIR LD+L V+EV+ +P+  ++         +G L     N ET       
Sbjct: 220  RAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPPTSN 279

Query: 328  -----------EQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEK 182
                       + GFG RRRHRC VVTAR R+FLYHQVRLLVGVLK VGTG L I DVE+
Sbjct: 280  PSIDKVMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVER 339

Query: 181  ILKAKSVSAASPMAPACGLYLGRVKYDL 98
            IL A++V+AASPMAPACGLYLG VKYDL
Sbjct: 340  ILNARTVTAASPMAPACGLYLGEVKYDL 367


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|332190374|gb|AEE28495.1| pseudouridine synthase family
            protein [Arabidopsis thaliana]
          Length = 372

 Score =  426 bits (1096), Expect = e-117
 Identities = 214/321 (66%), Positives = 255/321 (79%), Gaps = 29/321 (9%)
 Frame = -2

Query: 976  NPRIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRTDAGVHA 797
            NPR+QRYLVAIEYIGTRF G Q+Q   RTVVG L++AF+KFIG PV + CSSRTDAGVHA
Sbjct: 51   NPRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHA 110

Query: 796  LSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVPADFHAR 617
            LSNVCHVDVERISKRKPGEVL PHEP VV++AVNHFL + + GD+MVIDVRCVP+++HAR
Sbjct: 111  LSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKD-GDVMVIDVRCVPSNYHAR 169

Query: 616  YEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSSFRAAGC 437
            Y+A+ERTYFYRLLSG +PLS  EKDR WH+P++L+L  +Q+ACRVLVG HDFSSFRAAGC
Sbjct: 170  YKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHDFSSFRAAGC 229

Query: 436  QAKSPIRNLDQLDVSEVVSTPF--------ISNVDGN--------------------GSL 341
            QAKSP+R+LD+L+++EV STP+        +SN++                      G +
Sbjct: 230  QAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSETAGVTTNVGEV 289

Query: 340  NGETE-QGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVEKILKAKS 164
             G TE   FG RRRHRCYVVTAR R FLYHQVRL+VG LKCVGTGEL +SDVE+IL+AK+
Sbjct: 290  EGSTEGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAKT 349

Query: 163  VSAASPMAPACGLYLGRVKYD 101
            VSAA PMAPA GLYL RV+Y+
Sbjct: 350  VSAAKPMAPASGLYLARVRYE 370


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  426 bits (1094), Expect = e-116
 Identities = 221/329 (67%), Positives = 254/329 (77%), Gaps = 33/329 (10%)
 Frame = -2

Query: 985  MNQNP---RIQRYLVAIEYIGTRFFGCQKQPNCRTVVGALEDAFYKFIGGPVSVSCSSRT 815
            MNQ+    +IQRYLVA+EYIGTRFFG QKQ   RTV G LEDAF KF+G PVSV CSSRT
Sbjct: 32   MNQHHHHRKIQRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCKFVGQPVSVVCSSRT 91

Query: 814  DAGVHALSNVCHVDVERISKRKPGEVLLPHEPAVVRKAVNHFLHKNEGGDLMVIDVRCVP 635
            DAGVHALSNVCHVD+ERISKRKPGEVL PHEPAVVR+AVNHFL K E GDL VIDVRCVP
Sbjct: 92   DAGVHALSNVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQK-ENGDLAVIDVRCVP 150

Query: 634  ADFHARYEARERTYFYRLLSGQEPLSSFEKDRAWHIPQDLDLVSIQKACRVLVGRHDFSS 455
            +DFHARY+A+ERTYFYRLLSG E LS+FEKDRAWHIP++L+L ++Q+AC+VLVG HDFSS
Sbjct: 151  SDFHARYKAQERTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVLVGHHDFSS 210

Query: 454  FRAAGCQAKSPIRNLDQLDVSEVVSTPFISNV-DGNGSLN-------------------- 338
            FRA+GCQAKSPIR+LD+L V EV  +P+  +V D    +N                    
Sbjct: 211  FRASGCQAKSPIRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSETVIPLGS 270

Query: 337  ---------GETEQGFGIRRRHRCYVVTARGRSFLYHQVRLLVGVLKCVGTGELKISDVE 185
                      + + GFG RR HRC VVTAR R+FLYHQVRLLVGVLK VGTG + ++DVE
Sbjct: 271  SARIDEVSASKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVE 330

Query: 184  KILKAKSVSAASPMAPACGLYLGRVKYDL 98
            +IL AK+V+A SPMAPACGLYLG VKYDL
Sbjct: 331  RILNAKTVTATSPMAPACGLYLGEVKYDL 359