BLASTX nr result

ID: Paeonia22_contig00006949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00006949
         (723 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...    59   2e-06
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...    59   2e-06
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]          59   2e-06
gb|ABA97446.1| retrotransposon protein, putative, Ty3-gypsy subc...    57   5e-06
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]            57   6e-06
ref|XP_006356739.1| PREDICTED: uncharacterized protein LOC102595...    57   8e-06

>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +1

Query: 541  KVDDLVYLKVTPMKGITRFDKKRKLAPRYIGHFPISARVGS 663
            +VDD VYLKV+PMKG+ RF KK KL+PRYIG + I  RVGS
Sbjct: 1457 EVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGS 1497


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +1

Query: 541  KVDDLVYLKVTPMKGITRFDKKRKLAPRYIGHFPISARVGS 663
            +VDD VYLKV+PMKG+ RF KK KL+PRYIG + I  RVGS
Sbjct: 1451 EVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGS 1491


>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
          Length = 4543

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = +1

Query: 541  KVDDLVYLKVTPMKGITRFDKKRKLAPRYIGHFPISARVGS 663
            +VDD VYLKV+PMKG+ RF KK KL+PRYIG + I+ R+G+
Sbjct: 1206 EVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 1246



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = +1

Query: 541  KVDDLVYLKVTPMKGITRFDKKRKLAPRYIGHFPISARVGS 663
            +VDD VYLKV+PMKG+ RF KK KL+PRYIG + I+ R+G+
Sbjct: 2716 EVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 2756



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = +1

Query: 541  KVDDLVYLKVTPMKGITRFDKKRKLAPRYIGHFPISARVGS 663
            +VDD VYLKV+PMKG+ RF KK KL+PRYIG + I+ R+G+
Sbjct: 4226 EVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 4266


>gb|ABA97446.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1847

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 544  VDDLVYLKVTPMKGITRFDKKRKLAPRYIGHFPISARVG 660
            VDD VYL+VTP++G+ RF  KRKLAPRY+G F I AR G
Sbjct: 1698 VDDFVYLRVTPLRGVHRFQTKRKLAPRYVGPFRIIARRG 1736


>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +1

Query: 541  KVDDLVYLKVTPMKGITRFDKKRKLAPRYIGHFPISARVGS 663
            +VDD VYLKV+PMKG+ RF KK KL+P+YIG + I+ R+G+
Sbjct: 1457 EVDDWVYLKVSPMKGVMRFGKKGKLSPQYIGPYRIAKRIGN 1497


>ref|XP_006356739.1| PREDICTED: uncharacterized protein LOC102595791 [Solanum tuberosum]
          Length = 774

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 26/40 (65%), Positives = 31/40 (77%)
 Frame = +1

Query: 541 KVDDLVYLKVTPMKGITRFDKKRKLAPRYIGHFPISARVG 660
           KV D VYLKV+PMKG+ RF KK KL+PRY+G + I  RVG
Sbjct: 35  KVGDWVYLKVSPMKGVVRFGKKGKLSPRYVGPYEIIRRVG 74


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