BLASTX nr result

ID: Paeonia22_contig00006176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00006176
         (323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300142.1| F-box family protein [Populus trichocarpa] g...    62   1e-07
ref|XP_007025790.1| F-box/RNI-like superfamily protein, putative...    57   3e-06

>ref|XP_002300142.1| F-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| F-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/69 (47%), Positives = 44/69 (63%)
 Frame = -2

Query: 322 LSHVRDFFIGEECIEELTQAALCKGFSCPRSTRKSLTLVACLDKWSLPGIASLLESSPQV 143
           L HV    IG  C++ L+ + + KG S P S  K LTL   ++KW LPGIASLL+SSP +
Sbjct: 331 LQHVEKLTIGTWCLQVLSISEV-KGLSSPTSACKYLTLNKKINKWDLPGIASLLQSSPNL 389

Query: 142 ETLVINTLP 116
           + L IN +P
Sbjct: 390 QKLTINLMP 398


>ref|XP_007025790.1| F-box/RNI-like superfamily protein, putative [Theobroma cacao]
           gi|508781156|gb|EOY28412.1| F-box/RNI-like superfamily
           protein, putative [Theobroma cacao]
          Length = 528

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
 Frame = -2

Query: 322 LSHVRDFFIGEECIEELTQAALCKGFSCPRSTRKSLTLVACLDKWSLPGIASLLESSPQV 143
           L HV +  +G  C++ L+   + KG S P S R  L L   + +W LPGI SLL+SSP +
Sbjct: 342 LCHVEELTVGTWCLQVLSIWEI-KGISSPLSKRSCLVLDTEICEWDLPGIVSLLQSSPYL 400

Query: 142 ETLVINTLPEEGSQGPYGDDCLKSREAS--YFLEQRG---VNFLQHVKTVKI 2
           + LV+N  P + S+  +  +   S E     FL        +FLQ ++ ++I
Sbjct: 401 KKLVLNLSPCDNSKFEFDQEFFNSYELDGVAFLSSANWIFKSFLQSLEDIEI 452


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