BLASTX nr result
ID: Paeonia22_contig00005677
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00005677
(2876 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 692 0.0
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 686 0.0
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 685 0.0
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 685 0.0
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 682 0.0
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 670 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 669 0.0
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 666 0.0
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 662 0.0
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 661 0.0
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 638 e-180
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 638 e-180
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 635 e-179
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 634 e-179
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 634 e-179
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 634 e-179
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 631 e-178
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 630 e-177
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 625 e-176
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 619 e-174
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 692 bits (1787), Expect = 0.0
Identities = 368/564 (65%), Positives = 439/564 (77%), Gaps = 21/564 (3%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TP AKGFVA+SFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LEDLSIQY
Sbjct: 824 TPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQY 883
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNANG IVQF YGDDG+DPA+MEGKDG PLNF+RLF+KVKATCP + LS +I
Sbjct: 884 DETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI 943
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFMGFAKGTFC--------------------- 477
++ + KR E +T+ EG CS AF +LS F+ K F
Sbjct: 944 EETV-KRLKEHNTSAEG-CSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQ 1001
Query: 478 EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
EK A+NISGITSKQLQVFLDTCISRY KRIEAGT IGAIGAHSI EPGTQMTLKTFHFA
Sbjct: 1002 EKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFA 1061
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS NVTLG PR+KEI+ G+K IS P+ITA LEC++N K A++VKGRIERT LGQVAKS
Sbjct: 1062 GVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKS 1121
Query: 838 IKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEI 1017
IKIV+T R + V LD++ I+ASQL ID+N V+++IL+ RIK KQ IKVL+ +LE+
Sbjct: 1122 IKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEV 1181
Query: 1018 IPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEGTGLLA 1197
PQ DRS +HFEL +LK++LP +VV+GI T+ER + NK+ N+ Y L +EGTGL
Sbjct: 1182 HPQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKD-----NKVKYNLLVEGTGLQT 1236
Query: 1198 TIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLADVM 1377
+GTEGV G T SN + EVQ+ LGIEAARKCII+EI+ M GMSIDIRHMMLLAD+M
Sbjct: 1237 VMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLM 1296
Query: 1378 TSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTPIK 1557
T GE LGI+ FG+QK+ +SVLMLASFEK LFNA+V+GR+D IEGVSECIIMG P++
Sbjct: 1297 TFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQ 1356
Query: 1558 IGTGILKVRQRVEHVHQLNYGVDP 1629
+GTGILKVRQR++ V +L+YG+DP
Sbjct: 1357 LGTGILKVRQRLQQVPELSYGLDP 1380
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 686 bits (1770), Expect = 0.0
Identities = 360/566 (63%), Positives = 434/566 (76%), Gaps = 23/566 (4%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFV++SFY GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+LEDL + Y
Sbjct: 610 TPAAKGFVSHSFYDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLFVHY 669
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNA+ I+QFCYGDDG+DPA MEGK+GAPLNF+RLF+K KATCP LSPE++
Sbjct: 670 DNTVRNASACIIQFCYGDDGMDPAHMEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKV 729
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFMGFAKGTF------CEKGAQN--------- 495
+ ++ R S++D TPEGGCSAAF SL F+ F CE +
Sbjct: 730 SELVESRLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATT 789
Query: 496 ------ISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
+SG T++QL+VFLDTCISRYHSK+IEAGT IGAIGA SI EPGTQMTLKTFHFA
Sbjct: 790 KNIVLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 849
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS NVTLG PR+KEI+ G+K IS P+ITA LECD+N A+IV+GRIE+ LGQVAKS
Sbjct: 850 GVASMNVTLGVPRIKEIINGAKKISTPIITAILECDNNVNFARIVRGRIEKISLGQVAKS 909
Query: 838 IKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEI 1017
IK VMT R SVV+TLD++RI+ + L IDAN V+D+ILQ PRIK K+ I+VL+ K+LEI
Sbjct: 910 IKTVMTSRVASVVITLDMERIQDALLSIDANVVRDSILQTPRIKLKKEHIRVLDFKKLEI 969
Query: 1018 IP-QVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKN-REGYQLFIEGTGL 1191
+P + +RSKL+ L L ML I+V+GI T+ER + + EK K + + Y+L +EGTGL
Sbjct: 970 LPYESNRSKLYHHLQFLAKMLQNILVKGIKTVERAVISSEKDKKTDISKKYKLLVEGTGL 1029
Query: 1192 LATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLAD 1371
L +GTEGVDG NTK+N + EVQ+ LGIEAAR CIIDEIE M GMSID RHMMLLAD
Sbjct: 1030 LGVMGTEGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMKSHGMSIDTRHMMLLAD 1089
Query: 1372 VMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTP 1551
VMTS GE LGI+ FG+QK+ +SVLMLASFEK LFNA+VNGRED IEGVSECIIMG P
Sbjct: 1090 VMTSRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGIP 1149
Query: 1552 IKIGTGILKVRQRVEHVHQLNYGVDP 1629
++IGTG++KVRQRV+ L+YG P
Sbjct: 1150 MQIGTGMIKVRQRVDVPPMLSYGPKP 1175
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 685 bits (1768), Expect = 0.0
Identities = 356/567 (62%), Positives = 431/567 (76%), Gaps = 24/567 (4%)
Frame = +1
Query: 4 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYD 183
PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+LEDLSIQYD
Sbjct: 838 PAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYD 897
Query: 184 GTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIK 363
+VRNA G IVQF YGDDG+DPA MEGK G PLNFDRL MKVKATCPP +LSP+++
Sbjct: 898 NSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVS 957
Query: 364 QAMDKRFSERDTTPEGGCSAAFIESLSKF-----------------MGFA-KGTFCEKGA 489
+ ++K+ + + CS AF+ SL KF +G+ K E+
Sbjct: 958 EIVEKQLAAYG---KESCSEAFLNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVT 1014
Query: 490 QNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVAS 669
SGIT KQL+VF+ TC SRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHFAGVAS
Sbjct: 1015 HKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1074
Query: 670 KNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIV 849
N+T G PR+KEI+ G+K IS P+ITA LEC+DNE AA++VKGRIE+T+LGQVAKSIKIV
Sbjct: 1075 MNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIV 1134
Query: 850 MTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEIIPQV 1029
MT R S+V+ LD++ I+ + LCI+A+ VK++I+Q P+IK KQ IKVL+ ++LEI P V
Sbjct: 1135 MTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPV 1194
Query: 1030 DRSKLHFELSSLKSMLPKIVVRGISTIER-VLYNKEKIKGKNREG-----YQLFIEGTGL 1191
D+SK+HFEL SLK++LP ++V+GI T+ER V+ KEK K K +E Y+L +EGTGL
Sbjct: 1195 DKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGL 1254
Query: 1192 LATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLAD 1371
A +G EG+DGC TKSN + EVQ+ LGIEAAR CIIDEI + M GMSID RHMMLLAD
Sbjct: 1255 QAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLAD 1314
Query: 1372 VMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTP 1551
+MT GE LGI+ FG+QK+ +SVLMLASFEK LFNA+VNGR+D IEGVSECIIMG P
Sbjct: 1315 LMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIP 1374
Query: 1552 IKIGTGILKVRQRVEHVHQLNYGVDPP 1632
+ +GTGILK+RQR L YG P
Sbjct: 1375 MPLGTGILKIRQRDAVPPMLKYGAPDP 1401
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 685 bits (1768), Expect = 0.0
Identities = 356/567 (62%), Positives = 431/567 (76%), Gaps = 24/567 (4%)
Frame = +1
Query: 4 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYD 183
PAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+LEDLSIQYD
Sbjct: 831 PAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYD 890
Query: 184 GTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIK 363
+VRNA G IVQF YGDDG+DPA MEGK G PLNFDRL MKVKATCPP +LSP+++
Sbjct: 891 NSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVS 950
Query: 364 QAMDKRFSERDTTPEGGCSAAFIESLSKF-----------------MGFA-KGTFCEKGA 489
+ ++K+ + + CS AF+ SL KF +G+ K E+
Sbjct: 951 EIVEKQLAAYG---KESCSEAFLNSLRKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVT 1007
Query: 490 QNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVAS 669
SGIT KQL+VF+ TC SRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHFAGVAS
Sbjct: 1008 HKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1067
Query: 670 KNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIV 849
N+T G PR+KEI+ G+K IS P+ITA LEC+DNE AA++VKGRIE+T+LGQVAKSIKIV
Sbjct: 1068 MNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIV 1127
Query: 850 MTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEIIPQV 1029
MT R S+V+ LD++ I+ + LCI+A+ VK++I+Q P+IK KQ IKVL+ ++LEI P V
Sbjct: 1128 MTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPV 1187
Query: 1030 DRSKLHFELSSLKSMLPKIVVRGISTIER-VLYNKEKIKGKNREG-----YQLFIEGTGL 1191
D+SK+HFEL SLK++LP ++V+GI T+ER V+ KEK K K +E Y+L +EGTGL
Sbjct: 1188 DKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGL 1247
Query: 1192 LATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLAD 1371
A +G EG+DGC TKSN + EVQ+ LGIEAAR CIIDEI + M GMSID RHMMLLAD
Sbjct: 1248 QAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLAD 1307
Query: 1372 VMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTP 1551
+MT GE LGI+ FG+QK+ +SVLMLASFEK LFNA+VNGR+D IEGVSECIIMG P
Sbjct: 1308 LMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIP 1367
Query: 1552 IKIGTGILKVRQRVEHVHQLNYGVDPP 1632
+ +GTGILK+RQR L YG P
Sbjct: 1368 MPLGTGILKIRQRDAVPPMLKYGAPDP 1394
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 682 bits (1759), Expect = 0.0
Identities = 354/575 (61%), Positives = 429/575 (74%), Gaps = 31/575 (5%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+K+LEDLSI Y
Sbjct: 824 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHY 883
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D +VRNA G IVQFCYGDDG+DPAQMEGK GAPLNF+RLF+K KATCP LSP E
Sbjct: 884 DSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEF 943
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFMGF-------AKGTFC-------------- 477
+ ++ R S+ D +PE GCS AF+ SL F+ + GT
Sbjct: 944 SETVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISS 1003
Query: 478 ---------EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQ 630
K QNI+G+T +QLQVFLDTC+SRYH+K+IEAGT IGAIGA SI EPGTQ
Sbjct: 1004 SDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQ 1063
Query: 631 MTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIER 810
MTLKTFHFAGVAS NVTLG PR+KEI+ G+K IS P++TA L DDN A++VK RIE+
Sbjct: 1064 MTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEK 1123
Query: 811 TVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIK 990
T LGQ+AK I+IVM+ RS + + LD+++I ++L +DAN VK AIL P++K K I
Sbjct: 1124 TNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHIN 1183
Query: 991 VLNVKRLEIIPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQ 1167
VL+ ++L ++PQ DR+KLHF L LK+MLP +VV+GI T+ R + +EK K +N + +
Sbjct: 1184 VLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFS 1243
Query: 1168 LFIEGTGLLATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDI 1347
L +EGTGL A +GTEGVDGCNTKSN + EVQ+ LGIEAARKCII+EI+ M+ GMSIDI
Sbjct: 1244 LLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDI 1303
Query: 1348 RHMMLLADVMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVS 1527
RHMMLL D+MT GE LGI+ FG+QK+ +SVLMLASFEK LFNA+VNGR+D IEGVS
Sbjct: 1304 RHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVS 1363
Query: 1528 ECIIMGTPIKIGTGILKVRQRVEHVHQLNYGVDPP 1632
EC+IMG P+ +GTG+LKVRQRV QL YG PP
Sbjct: 1364 ECVIMGIPMPLGTGMLKVRQRVSVPQQLPYG--PP 1396
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 670 bits (1729), Expect = 0.0
Identities = 358/568 (63%), Positives = 428/568 (75%), Gaps = 22/568 (3%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFYSGLTATEFFFHTM GREGLVDTAVKTA+TGYM+RRL+K+LEDLSI Y
Sbjct: 830 TPAAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHY 889
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNA+G IVQF YGDDG+DPA MEGK G PLNFDRL MKVKATCPP + L I
Sbjct: 890 DNTVRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSI 949
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFMGFA----------------KGTFCEKGAQ 492
Q ++++ ++ D P G CS AF +SL F+ K EK
Sbjct: 950 MQMLEEQLAKHD--PAGVCSEAFKKSLKGFLKSQTNELDRVMKLVNNCAQKSEILEKVGH 1007
Query: 493 NISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGVASK 672
ISGI+ +QL+VF+ TCISRY SK IEAGT IGAIGA SI EPGTQMTLKTFHFAGVAS
Sbjct: 1008 KISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1067
Query: 673 NVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIKIVM 852
N+T G PR+KEI+ +K IS PVITA LE DDN AQIVKGRIE+TVLGQVAKSIKIV+
Sbjct: 1068 NITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVI 1127
Query: 853 TPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEIIPQVD 1032
T RS SVV+TLD++ I ++L IDAN VK++ILQ P+IK K+ +KVL+ ++LE++P D
Sbjct: 1128 TSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKVLDGRKLEVVPPAD 1187
Query: 1033 RSKLHFELSSLKSMLPKIVVRGISTIER-VLYNKEKIKGKNRE-----GYQLFIEGTGLL 1194
RS++HFEL SLK++LP +VV+GI T+ER V+Y+K K K +E +QL +EGTGL
Sbjct: 1188 RSQIHFELHSLKNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQ 1247
Query: 1195 ATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLADV 1374
A +G EG+DG T SN V E+++ LGIEAARKCIIDEI M+ GM+ID RHMMLLADV
Sbjct: 1248 AVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADV 1307
Query: 1375 MTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTPI 1554
MT GE LGI+ FG+QK+ +S+LMLASFE+ LFNAAVNGR+D IEGV+ECIIMG P+
Sbjct: 1308 MTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPM 1367
Query: 1555 KIGTGILKVRQRVEHVHQLNYGVDPPCS 1638
+IGTGILKV QRV+ L YG DP S
Sbjct: 1368 QIGTGILKVIQRVDPPPMLRYGPDPVLS 1395
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 669 bits (1725), Expect = 0.0
Identities = 353/569 (62%), Positives = 426/569 (74%), Gaps = 27/569 (4%)
Frame = +1
Query: 4 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYD 183
PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LEDL++ YD
Sbjct: 820 PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 879
Query: 184 GTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIK 363
TVRNA+ IVQF YGDDG+DP++ME K G PLNF RLFMKVKATCPP LS EI
Sbjct: 880 STVRNASACIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEIC 939
Query: 364 QAMDKRFSERDTTPEGGCSAAFIESLSKFM-----------------------GFAKGTF 474
+ +++R S D TPEGGCS AF SLS F+ G +G +
Sbjct: 940 EIVNERLSYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRG-Y 998
Query: 475 CEKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHF 654
EK NISGIT KQLQVFL+TCISRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHF
Sbjct: 999 LEKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHF 1058
Query: 655 AGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAK 834
AGVAS NVTLG PR+KEI+ +K I+ P+ITA L N AA+++K RIE+T+LGQVAK
Sbjct: 1059 AGVASMNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAK 1118
Query: 835 SIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLE 1014
S+KIV+ R S+ ++LD++ I+ SQLCIDA VK +ILQ +IK K+ IKVLN ++LE
Sbjct: 1119 SVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLE 1178
Query: 1015 IIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNR----EGYQLFIEG 1182
+ PQ ++ KLHFEL LK+ LP +VV+GI+T++R + NKE+ K + E Y+L +EG
Sbjct: 1179 VFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEG 1238
Query: 1183 TGLLATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMML 1362
TGLLA +G EGVDG TKSN + EVQ LGIEAAR IIDEI M GM+ID+RHMML
Sbjct: 1239 TGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMML 1298
Query: 1363 LADVMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIM 1542
LAD+MT GE LGI+ G+QK+K+SVLMLASFEK LFNA+VNGR+D IEGV+ECIIM
Sbjct: 1299 LADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIM 1358
Query: 1543 GTPIKIGTGILKVRQRVEHVHQLNYGVDP 1629
G P+ IGTG+ K+RQRVEHV +LNY DP
Sbjct: 1359 GIPMTIGTGMFKLRQRVEHV-ELNYQPDP 1386
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 666 bits (1718), Expect = 0.0
Identities = 352/569 (61%), Positives = 425/569 (74%), Gaps = 27/569 (4%)
Frame = +1
Query: 4 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYD 183
PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LEDL++ YD
Sbjct: 820 PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 879
Query: 184 GTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIK 363
TVRNA+ IVQF YGDDG+DP+QME K G PLNF RLFMKVKATCPP LS EI
Sbjct: 880 STVRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEIC 939
Query: 364 QAMDKRFSERDTTPEGGCSAAFIESLSKFM-----------------------GFAKGTF 474
+ +++R S D TPEGGCS AF SLS F+ G +G +
Sbjct: 940 EIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRG-Y 998
Query: 475 CEKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHF 654
EK A NISGIT +QLQVFL+TCISRYH KR+EAGT IGAIGA SI EPGTQMTLKTFHF
Sbjct: 999 LEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHF 1058
Query: 655 AGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAK 834
AGVAS NVTLG PR+KEI+ +K I+ P+IT L N AA+++K RIE+T+LGQVAK
Sbjct: 1059 AGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAK 1118
Query: 835 SIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLE 1014
S+KIV+ R S+ ++LD++ I+ SQLCIDA VK +ILQ +IK K+ IKVLN ++LE
Sbjct: 1119 SVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLE 1178
Query: 1015 IIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNR----EGYQLFIEG 1182
+ PQ ++ KLHFEL LK+ LP +VV+GI+T++R + NKE+ K + E Y+L +EG
Sbjct: 1179 VFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEG 1238
Query: 1183 TGLLATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMML 1362
TGLLA +G EGVDG TKSN + EVQ LGIEAAR IIDEI M GM+ID+RHMML
Sbjct: 1239 TGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMML 1298
Query: 1363 LADVMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIM 1542
LAD+MT GE LGI+ G+QK+K+SVLMLASFEK LFNA+VNGR+D IEGV+ECIIM
Sbjct: 1299 LADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIM 1358
Query: 1543 GTPIKIGTGILKVRQRVEHVHQLNYGVDP 1629
G P+ IGTG+ K+RQRVE V +LNY DP
Sbjct: 1359 GIPMTIGTGMFKLRQRVEQV-ELNYQPDP 1386
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 662 bits (1708), Expect = 0.0
Identities = 354/564 (62%), Positives = 418/564 (74%), Gaps = 34/564 (6%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYMARRL K LEDL +QY
Sbjct: 831 TPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQY 890
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TV++A GGIVQF YGDDGLDPA MEGK G PLNFDRLFMKVKATC + +LSP +I
Sbjct: 891 DNTVQDAGGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDI 950
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFMG-FAKGTFC-------------------- 477
+ + + T +G CS +F +SLS F+G AK C
Sbjct: 951 SNIVQSLLLKHNGTLDGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVE 1010
Query: 478 ---------EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQ 630
EK AQ +SGIT KQL+VFL TC+ RY KRIE GT IGAIGA SI EPGTQ
Sbjct: 1011 GLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQ 1070
Query: 631 MTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIER 810
MTLKTFHFAGVAS N+T G PR+KEI+ G+K IS P+IT LE + N AA+I+KGRI++
Sbjct: 1071 MTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQK 1130
Query: 811 TVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIK 990
TVLGQVAKSIKIVMT RS SV VTLD+K I +QL +DAN V++ IL+ P+IK K I
Sbjct: 1131 TVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRIN 1190
Query: 991 VLNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKI-KGKNREG-- 1161
VL +LE+ P DR+KLHFEL SLK+MLP +VV+GI T+ERV+ ++K+ +N +G
Sbjct: 1191 VLEDGKLEVFPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGP 1250
Query: 1162 -YQLFIEGTGLLATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMS 1338
Y +F+EG GL A +GTEGVDG TKSN + EVQE LGIEAARKCIIDEI+ M+ GMS
Sbjct: 1251 KYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMS 1310
Query: 1339 IDIRHMMLLADVMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIE 1518
IDIRHMMLLADVMTS G LGI+ FG+QK+ +SVLMLASFEK LFNA+V G++D IE
Sbjct: 1311 IDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIE 1370
Query: 1519 GVSECIIMGTPIKIGTGILKVRQR 1590
GVSECIIMG P+ IGTG+LK++QR
Sbjct: 1371 GVSECIIMGIPVAIGTGVLKIQQR 1394
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 661 bits (1706), Expect = 0.0
Identities = 352/575 (61%), Positives = 422/575 (73%), Gaps = 33/575 (5%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFYSGL ATEFFFHTM GREGLVDTAVKTADTGYM+RRL+K LEDLSIQY
Sbjct: 805 TPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSIQY 864
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNA+G IVQF YGDDGLDPA MEGK G PLN DRLF KVKATCP R+ +LSP +I
Sbjct: 865 DNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREEDYLSPLDI 924
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFMG-----------FAKGT------------ 471
++ + D G CS AF +SL+ F+G A G
Sbjct: 925 SDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTGG 984
Query: 472 ------FCEKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQM 633
E+ A I G++ +Q++VF+ TCI+RY KR+E GT IGAIGA SI EPGTQM
Sbjct: 985 IRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQM 1044
Query: 634 TLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERT 813
TLKTFHFAGVAS N+T G PR+KEI+ G+K IS P+ITA LE + N AA+I KGRI++T
Sbjct: 1045 TLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKGRIQKT 1104
Query: 814 VLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKV 993
VLGQVAKSIKIVMT RS SVV+TLD+K I+ +QL +DAN VK+AIL+ PRIK K IKV
Sbjct: 1105 VLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKV 1164
Query: 994 LNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNRE----G 1161
L+ ++LE+IP DR ++HFEL +LK++LP I+V+GI T+ER + ++K GK +
Sbjct: 1165 LDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGIKTVERAVIAQKKHDGKANDQELPT 1224
Query: 1162 YQLFIEGTGLLATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSI 1341
Y + +EG GL +GTEGVDGC T SN V EVQ+ LGIEAARKCIIDEI M+ GMSI
Sbjct: 1225 YNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHGMSI 1284
Query: 1342 DIRHMMLLADVMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEG 1521
DIRHMMLL D+MT GE LGI+ FG+QK+ +SVLMLASFEK L++AAV GR+D IEG
Sbjct: 1285 DIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDKIEG 1344
Query: 1522 VSECIIMGTPIKIGTGILKVRQRVEHVHQLNYGVD 1626
VSECIIMG P++IGTGILKV+QRV+ LNYG D
Sbjct: 1345 VSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGSD 1379
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 638 bits (1646), Expect = e-180
Identities = 338/565 (59%), Positives = 419/565 (74%), Gaps = 22/565 (3%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYM+RRLMK LEDLS+ Y
Sbjct: 831 TPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFY 890
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNA+GGIVQF YGDDG+DPA+MEGKDG PLN D+LFMKV ATCP R LSP++I
Sbjct: 891 DQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDI 950
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFM-------------------GFAKGTFC-- 477
KQ ++ + ++ T+ +GGCS F E L KF+ K C
Sbjct: 951 KQMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIE 1010
Query: 478 EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
E A NISGI++KQLQVFLDTC SRY+SK IEAG IGAIGA SI EPGTQMTLKTFHFA
Sbjct: 1011 EIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFA 1070
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS NVTLG PR+KEI+ +K IS P+IT L + +A+IVKG +E+ VLG+VA +
Sbjct: 1071 GVASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASA 1130
Query: 838 IKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEI 1017
IKIV+ ++VV LD++ IEA + I A++V+ +IL P+IK K ++V++ +L I
Sbjct: 1131 IKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRI 1190
Query: 1018 IPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEGTGLL 1194
P D+SKL EL +LK+MLPK++V+GI T+ERV+ ++ K +GK E Y L +EGT LL
Sbjct: 1191 YPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGK-LEKYNLLVEGTNLL 1249
Query: 1195 ATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLADV 1374
A +GT GVD NTKSN + E+ LGIEAAR+ IIDEI+ M GM+ID+RHMMLLAD+
Sbjct: 1250 AVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADL 1309
Query: 1375 MTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTPI 1554
MT GE LGI+ +G+ K+K SVLMLASFEK LFNA+ +GRED IEGVSECIIMG P+
Sbjct: 1310 MTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPM 1369
Query: 1555 KIGTGILKVRQRVEHVHQLNYGVDP 1629
++GTGILKVRQR++H+ +L Y DP
Sbjct: 1370 QLGTGILKVRQRLDHLPELKYQPDP 1394
>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Fragaria vesca subsp. vesca]
Length = 1390
Score = 638 bits (1645), Expect = e-180
Identities = 336/562 (59%), Positives = 411/562 (73%), Gaps = 31/562 (5%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVA+SFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDLS+QY
Sbjct: 826 TPAAKGFVASSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKVLEDLSVQY 885
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVR ANGGIVQFCYGDDG+DPA MEGK GAPL+F RLF + KATCP + LSP+E+
Sbjct: 886 DKTVRAANGGIVQFCYGDDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSPDEV 945
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFMG---------------------FAKGTFC 477
+ + R SE+D TP+GGCS F S+ +F+ K
Sbjct: 946 SEIVRSRLSEQDMTPDGGCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKSATL 1005
Query: 478 EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
+ QNISG+T +QL+VFLDTCISRYHSK+++AGT IG IGA SI EPGTQMTLKTFHFA
Sbjct: 1006 QNIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFA 1065
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS NVTLG PR+KEI+ G+KNI P+IT LECD+N A++V GRIE+T LGQVA+
Sbjct: 1066 GVASMNVTLGVPRIKEIINGAKNIHTPIITTVLECDNNPMIARMVAGRIEKTNLGQVAEC 1125
Query: 838 IKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEI 1017
I+IVM+PR+ V V LD+ I+ + L IDAN VK +IL PRIK K I+V + + +E+
Sbjct: 1126 IEIVMSPRAAYVEVKLDMAVIQDAHLSIDANVVKQSILGTPRIKLKHEHIRVPDNQTVEV 1185
Query: 1018 -IPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNRE---------GYQ 1167
+ DR KLHF L LKS+LP ++VRGI TIERV+ ++EK+K ++ Y+
Sbjct: 1186 HSHEKDRRKLHFHLYYLKSILPNVIVRGIKTIERVVIDEEKVKRDKKDIDIKCGDEKKYK 1245
Query: 1168 LFIEGTGLLATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDI 1347
LF EG GLLA + T+GVDGC T SN + EVQ+ LGIEAAR CII+EI+ M GM+ID
Sbjct: 1246 LFAEGKGLLAVMSTKGVDGCKTTSNDIIEVQQTLGIEAARTCIIEEIKYTMKSHGMNIDD 1305
Query: 1348 RHMMLLADVMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVS 1527
RHMMLLADVMT G LGI+ FG+Q++ +SVLMLASFE+ + LFNA+V G D IEGVS
Sbjct: 1306 RHMMLLADVMTFRGLVLGITRFGVQQMGKSVLMLASFERTDDHLFNASVQGTVDKIEGVS 1365
Query: 1528 ECIIMGTPIKIGTGILKVRQRV 1593
E IIMG P+ IGTG+ K++QR+
Sbjct: 1366 ESIIMGIPMPIGTGMFKIKQRL 1387
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 635 bits (1638), Expect = e-179
Identities = 341/564 (60%), Positives = 425/564 (75%), Gaps = 21/564 (3%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+R+LMKSLEDL + Y
Sbjct: 830 TPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHY 889
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCP-PRDPTFLSPEE 357
D TVRNA G IVQFCYGDDG+DPA MEGK+G PLNF+RLF+K KA CP D LS +
Sbjct: 890 DYTVRNAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSD 949
Query: 358 IKQAMDKRFSERDTTP-------EGGCSAAFIESLSKFM---------GFAK--GTFCEK 483
+ + + ++ SE D + E G SA F+ESL F+ GF +K
Sbjct: 950 VSKVVHEKLSEFDMSRLAEKGVFEVGFSADFVESLQSFIKDNAKLTEEGFTDEHSQNLKK 1009
Query: 484 GAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGV 663
Q ISGIT KQL VFL+ C+SRYHSK++EAG P+GA GAHSI EPGTQMTLKTFHFAGV
Sbjct: 1010 FGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKTFHFAGV 1069
Query: 664 ASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIK 843
AS NVTLG PRVKEI+ G+K IS P+ITA LE DDN A+IVKGRIE+T LGQVAKSIK
Sbjct: 1070 ASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTNLGQVAKSIK 1129
Query: 844 IVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEIIP 1023
+VMT RS SVV+TLD+KRI+ + L IDAN VK++IL+ + K K IK+L++K+LE++P
Sbjct: 1130 VVMTSRSASVVITLDMKRIQDAHLNIDANIVKESILRTKKTKLKPEHIKILDIKKLEVVP 1189
Query: 1024 Q-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEGTGLLAT 1200
Q VDRSK+HF+L LK++LP +VV+GI T++RV+ +K+ E ++L +EGTG
Sbjct: 1190 QDVDRSKIHFQLHYLKNLLPTVVVKGIKTVDRVVISKD----TKAEKFRLLVEGTGFREV 1245
Query: 1201 IGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVM-DKSGMSIDIRHMMLLADVM 1377
+G EG+DG T SN + EV++ LGIEAAR+ I+ EI+ M D GM+IDIRHMMLLAD+M
Sbjct: 1246 MGVEGIDGRKTVSNHIHEVRDTLGIEAARESIVKEIKYTMVDTHGMNIDIRHMMLLADMM 1305
Query: 1378 TSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTPIK 1557
T+TG LGI+ FG+ K+ +SVLMLASFE+ LF A+V GR+D+I GVSE IIMG PI+
Sbjct: 1306 TATGHILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPIQ 1365
Query: 1558 IGTGILKVRQRVEHVHQLNYGVDP 1629
IGTG++KV+QR++ +L +G P
Sbjct: 1366 IGTGMIKVKQRLD-PPELPHGTSP 1388
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 634 bits (1635), Expect = e-179
Identities = 340/569 (59%), Positives = 412/569 (72%), Gaps = 26/569 (4%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFY+GLTA EFFFHTMGGREGLVDTAVKTADTGY++RRL+KSLEDLS Y
Sbjct: 818 TPAAKGFVANSFYTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHY 877
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRN++G I+QF YGDDG+DPA+MEGK G PLN DRLFMK+KATCP LSP EI
Sbjct: 878 DDTVRNSSGTIIQFSYGDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEI 937
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKF---------------------MGFAKGTFC 477
++ R S+ D TPE GCS AF E LS F + K +
Sbjct: 938 STIVNDRLSKHDMTPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGL 997
Query: 478 EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
E A NISGI+ +QL+VFL+TCISRYH KRIEAGT IGAIGA SI EPGTQMTLKTFHFA
Sbjct: 998 EHVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1057
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS N+TLG PR+KEI+ SK IS P+ITA L CD++EK+A+IVKGRIE+T+LG+VAK+
Sbjct: 1058 GVASMNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKT 1117
Query: 838 IKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKV-----LNV 1002
+KI +TP S+ +TLD+KRIEA Q+ IDA V D+I + + K + +KV L
Sbjct: 1118 VKISVTPTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPD 1177
Query: 1003 KRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEG 1182
K ++P++ R ++ + L L+S+LPKI+V+GI T+ER + N +KGK L +EG
Sbjct: 1178 KLKILLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVIN--NVKGK----LNLLVEG 1231
Query: 1183 TGLLATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMML 1362
T LLA +GT GVDG NT SN + EV+ LGIEAARK IIDEI+ M GMSID+RHMML
Sbjct: 1232 TNLLAVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMML 1291
Query: 1363 LADVMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIM 1542
LAD+MT G LGI FG+ K+KESVLMLASFE+ LF+A GR D I GVSECIIM
Sbjct: 1292 LADLMTFRGLVLGIQRFGITKMKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIM 1351
Query: 1543 GTPIKIGTGILKVRQRVEHVHQLNYGVDP 1629
G P++IGTGIL V+QR E + +L YG DP
Sbjct: 1352 GVPMQIGTGILSVQQRPEQLAKLTYGPDP 1380
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 634 bits (1635), Expect = e-179
Identities = 335/565 (59%), Positives = 417/565 (73%), Gaps = 22/565 (3%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYM+RRLMK LEDLS+ Y
Sbjct: 756 TPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFY 815
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNA+GGIVQF YGDDG+DPA+MEGKDG PLN D+LFMKV ATCP R LSP EI
Sbjct: 816 DQTVRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEI 875
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFM---------------------GFAKGTFC 477
Q ++ + SE D + + GCS F + L+ F+ G +F
Sbjct: 876 LQILNDKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFE 935
Query: 478 EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
E A NISGI+ KQLQVFLDTC+SRYH K+IEAG IGAIGA SI EPGTQMTLKTFHFA
Sbjct: 936 ESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFA 995
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS NVTLG PR+KEI+ +K IS P+ITA L + + +A+IVKG +E+ VLG+VA++
Sbjct: 996 GVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEA 1055
Query: 838 IKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEI 1017
IKIV+ ++VV LD++RIEA + I A++V+ +IL P+IK K ++V++ +L I
Sbjct: 1056 IKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRI 1115
Query: 1018 IPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEGTGLL 1194
P +D+SKL +EL LKSMLPK++V+GI T+ER + + + +N + Y+L +EGT LL
Sbjct: 1116 YPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVIS--ETGEENDKRYKLLVEGTNLL 1173
Query: 1195 ATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLADV 1374
A +GT GVD TKSN + EV LGIEAAR+ IIDEI+ M GM+ID RHMMLLAD+
Sbjct: 1174 AVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADL 1233
Query: 1375 MTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTPI 1554
MT GE LGI+ +G+ K+K SVLMLASFEK LFNA+ +GRED IEGVSECIIMG P+
Sbjct: 1234 MTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPM 1293
Query: 1555 KIGTGILKVRQRVEHVHQLNYGVDP 1629
++GTGILKVRQR++H+ + Y DP
Sbjct: 1294 QLGTGILKVRQRLDHLPEFKYQPDP 1318
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 634 bits (1635), Expect = e-179
Identities = 335/565 (59%), Positives = 417/565 (73%), Gaps = 22/565 (3%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYM+RRLMK LEDLS+ Y
Sbjct: 818 TPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFY 877
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNA+GGIVQF YGDDG+DPA+MEGKDG PLN D+LFMKV ATCP R LSP EI
Sbjct: 878 DQTVRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEI 937
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFM---------------------GFAKGTFC 477
Q ++ + SE D + + GCS F + L+ F+ G +F
Sbjct: 938 LQILNDKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFE 997
Query: 478 EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
E A NISGI+ KQLQVFLDTC+SRYH K+IEAG IGAIGA SI EPGTQMTLKTFHFA
Sbjct: 998 ESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFA 1057
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS NVTLG PR+KEI+ +K IS P+ITA L + + +A+IVKG +E+ VLG+VA++
Sbjct: 1058 GVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEA 1117
Query: 838 IKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEI 1017
IKIV+ ++VV LD++RIEA + I A++V+ +IL P+IK K ++V++ +L I
Sbjct: 1118 IKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRI 1177
Query: 1018 IPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEGTGLL 1194
P +D+SKL +EL LKSMLPK++V+GI T+ER + + + +N + Y+L +EGT LL
Sbjct: 1178 YPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVIS--ETGEENDKRYKLLVEGTNLL 1235
Query: 1195 ATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLADV 1374
A +GT GVD TKSN + EV LGIEAAR+ IIDEI+ M GM+ID RHMMLLAD+
Sbjct: 1236 AVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADL 1295
Query: 1375 MTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTPI 1554
MT GE LGI+ +G+ K+K SVLMLASFEK LFNA+ +GRED IEGVSECIIMG P+
Sbjct: 1296 MTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPM 1355
Query: 1555 KIGTGILKVRQRVEHVHQLNYGVDP 1629
++GTGILKVRQR++H+ + Y DP
Sbjct: 1356 QLGTGILKVRQRLDHLPEFKYQPDP 1380
>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
gi|561005141|gb|ESW04135.1| hypothetical protein
PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 631 bits (1628), Expect = e-178
Identities = 339/564 (60%), Positives = 423/564 (75%), Gaps = 21/564 (3%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+R+LMKS+EDL + Y
Sbjct: 827 TPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHY 886
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPT-FLSPEE 357
D TVRNA G IVQFCYGDDG+DP MEGK+G PLNF+RLF+K KA CP +D LS +
Sbjct: 887 DYTVRNAGGSIVQFCYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSD 946
Query: 358 IKQAMDKRFSERDTTPEG-------GCSAAFIESLSKFMG----FAKGTFCEKGAQ---- 492
+ + + ++ SE + E G SA F++SL F+ + TF + +Q
Sbjct: 947 VCKVVQEKLSEFGVSREVEKGVLEVGFSADFVQSLQSFIKDNTKLTEETFTDDNSQILKK 1006
Query: 493 ---NISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFAGV 663
ISGIT QL+VFL+ C+SRYHSK+IEAG P+GA GAHSI EPGTQMTLKTFHFAGV
Sbjct: 1007 FGERISGITRAQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFHFAGV 1066
Query: 664 ASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKSIK 843
AS NVTLG PRVKEI+ G+K IS P+ITA LE D A+IVKGRIE+T LGQVAKSIK
Sbjct: 1067 ASMNVTLGVPRVKEIMNGNKKISTPIITAILERTDCANTARIVKGRIEKTNLGQVAKSIK 1126
Query: 844 IVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEIIP 1023
+V+T R SVV+TLD++RI+ + L IDAN VK++ILQ + K K IK+L+VK+L ++P
Sbjct: 1127 VVVTSRLASVVITLDMERIQDAHLNIDANIVKESILQTKKAKLKPEHIKILDVKKLRVVP 1186
Query: 1024 Q-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEGTGLLAT 1200
Q DRSKLHF+L+ LK++LP +VV+GI T +RV+ +KE+ K E ++L +EGTG
Sbjct: 1187 QDGDRSKLHFQLNYLKNLLPSVVVKGIKTADRVVISKEEDKITKAEKFKLLVEGTGFREV 1246
Query: 1201 IGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVM-DKSGMSIDIRHMMLLADVM 1377
+G EGVDGC T SN + EV++ LGIEAAR+CI+ EI+ VM D GM+ID RHMMLLADVM
Sbjct: 1247 MGVEGVDGCKTVSNHIHEVRDTLGIEAARECIVKEIKYVMVDTHGMNIDTRHMMLLADVM 1306
Query: 1378 TSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTPIK 1557
T+TG LGI+ FG+ K+ +SVLMLASFE+ LF A+V GR+D+I GVSE IIMG PI
Sbjct: 1307 TATGHILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPIT 1366
Query: 1558 IGTGILKVRQRVEHVHQLNYGVDP 1629
IGTG++KV+QR+E + L +G P
Sbjct: 1367 IGTGMIKVKQRLE-LPDLPHGASP 1389
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 630 bits (1625), Expect = e-177
Identities = 332/565 (58%), Positives = 418/565 (73%), Gaps = 22/565 (3%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYM+RRLMK LEDLS+ Y
Sbjct: 825 TPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFY 884
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNA+GGIVQF YGDDG+DPA+MEGKDG PLN D+LFMKV ATCP R LSPE I
Sbjct: 885 DQTVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAI 944
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKFMG-------------------FAKGTFC-- 477
KQ ++ + + DT+ +GGCS F ++L++F+ K C
Sbjct: 945 KQMLEDKLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVE 1004
Query: 478 EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
E A ISGI++KQLQVFLDTC+SRY SK+IEAG IGAIGA SI EPGTQMTLKTFHFA
Sbjct: 1005 ESVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFA 1064
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS NVTLG PR+KEI+ ++ IS P+ITA L + +A+IVKG +E+ VLG+VA +
Sbjct: 1065 GVASMNVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVA 1124
Query: 838 IKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLEI 1017
I+IV+ +++V LD++ IE+ + I A++V+ +IL P+IK K ++V++ +L I
Sbjct: 1125 IQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRI 1184
Query: 1018 IPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEGTGLL 1194
P D+ KL EL +LKS+LPK++V+GI T+ERV+ ++ K+K + E YQL +EGT LL
Sbjct: 1185 YPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNET-ERYQLLVEGTNLL 1243
Query: 1195 ATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLADV 1374
A +GT GVD TKSN + E + LGIEAAR+ IIDEI+ M GM+ID RHMMLLAD+
Sbjct: 1244 AVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADL 1303
Query: 1375 MTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTPI 1554
MT GE LGI+ +G+ K+K SVLMLASFEK LFNA+ +GRED IEGVSECIIMG P+
Sbjct: 1304 MTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPM 1363
Query: 1555 KIGTGILKVRQRVEHVHQLNYGVDP 1629
++GTGILKVRQR++HV + Y DP
Sbjct: 1364 QLGTGILKVRQRLDHVPEFKYQPDP 1388
>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
Length = 1394
Score = 625 bits (1611), Expect = e-176
Identities = 340/581 (58%), Positives = 417/581 (71%), Gaps = 39/581 (6%)
Frame = +1
Query: 4 PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQYD 183
P AKGFV NSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRLMK+LEDLS+ YD
Sbjct: 814 PDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYD 873
Query: 184 GTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEIK 363
GTVRNA+ IVQF YG D +DP QME K G PLNF+RLFMK KATCP + LS EEI
Sbjct: 874 GTVRNASVCIVQFVYGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEID 933
Query: 364 QAMDK----RFSERDTTPEGGCSAAFIESLSKFMGFA----------------------- 462
+ MD+ R SE TPEG S AF S +K G
Sbjct: 934 KTMDEIIGDRLSESTATPEGESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKL 993
Query: 463 ---------KGTFCEKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIA 615
KG + EK A NI G+T +QL VFL+TCISRY K+IE GT IGAIGAHSI
Sbjct: 994 NGKEHSDEDKG-YLEKIASNICGVTRQQLMVFLETCISRYRLKKIEGGTAIGAIGAHSIG 1052
Query: 616 EPGTQMTLKTFHFAGVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVK 795
EPGTQMTLKTFHFAGVAS NVTLG PR+KEI+ +K I+ P+I+ L+ D+NE A+IVK
Sbjct: 1053 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIISTALQSDNNEIIAKIVK 1112
Query: 796 GRIERTVLGQVAKSIKIVMTPRSGSVVVTLDLKRIEASQLCIDANAVKDAILQIPRIKSK 975
GRIE+T+L QVAKSIK RS S+V+TLD+ +I+ + L +DA VK++IL+ R+K K
Sbjct: 1113 GRIEKTLLEQVAKSIKTSQASRSTSIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLK 1172
Query: 976 QLDIKVLNVKRLEIIPQVDRSKLHFELSSLKSMLPKIVVRGISTIERVLY---NKEKIKG 1146
+ +KVL+ ++LEI+ Q D++KL FEL LK+ + K+VV+GI T+ER + KEK
Sbjct: 1173 EQQVKVLDHRKLEIVMQADKTKLQFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPS 1232
Query: 1147 KNREGYQLFIEGTGLLATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDK 1326
N++ +L +EGTGLL+ +G EGV+G T SN + EVQ LGIEAARK IIDEI+ M
Sbjct: 1233 ANKK-MKLLVEGTGLLSVMGIEGVEGRKTTSNHIIEVQHILGIEAARKKIIDEIQYTMSS 1291
Query: 1327 SGMSIDIRHMMLLADVMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGRE 1506
GM+IDIRHMMLLAD+MTS GE LGI+ +G+QK+K+SVLMLASFE+ LFNA+VNGR
Sbjct: 1292 HGMTIDIRHMMLLADLMTSKGEVLGITRYGVQKMKDSVLMLASFERTSDHLFNASVNGRV 1351
Query: 1507 DNIEGVSECIIMGTPIKIGTGILKVRQRVEHVHQLNYGVDP 1629
D IEGVSECIIMG P++IGTG+LKVRQ V+ + +L YG DP
Sbjct: 1352 DKIEGVSECIIMGIPVQIGTGMLKVRQNVKPI-ELTYGPDP 1391
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 619 bits (1595), Expect = e-174
Identities = 332/565 (58%), Positives = 408/565 (72%), Gaps = 23/565 (4%)
Frame = +1
Query: 1 TPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKSLEDLSIQY 180
TPAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYM+RRLMK LEDLS+ Y
Sbjct: 825 TPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFY 884
Query: 181 DGTVRNANGGIVQFCYGDDGLDPAQMEGKDGAPLNFDRLFMKVKATCPPRDPTFLSPEEI 360
D TVRNA+ GIVQF YGDDG+DP +MEGK G+PLN D+LFMKVKATCP R LSPE I
Sbjct: 885 DQTVRNASSGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDMLSPEAI 944
Query: 361 KQAMDKRFSERDTTPEGGCSAAFIESLSKF---------------------MGFAKGTFC 477
Q ++ + SE+D + GGCS F E L+KF +G +
Sbjct: 945 MQMLNDKLSEQDMS-SGGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSIE 1003
Query: 478 EKGAQNISGITSKQLQVFLDTCISRYHSKRIEAGTPIGAIGAHSIAEPGTQMTLKTFHFA 657
E+ A NISGI++KQLQVFLDTC+SRYHSK IEAG IGAIGA SI EPGTQMTLKTFHFA
Sbjct: 1004 ERIAANISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFA 1063
Query: 658 GVASKNVTLGFPRVKEIVLGSKNISRPVITAPLECDDNEKAAQIVKGRIERTVLGQVAKS 837
GVAS NVTLG PR+KEI+ +KNIS P+ITA L + A VK +E+ VLG+VA
Sbjct: 1064 GVASMNVTLGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVKRYVEKVVLGEVAAV 1123
Query: 838 IKIVMTPRSGSVVVTLDLKRIEAS-QLCIDANAVKDAILQIPRIKSKQLDIKVLNVKRLE 1014
IKIV+ ++VV LD++RIEA + I +++V+ +I++ P+IK K ++V++ +L
Sbjct: 1124 IKIVLKSSQPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRHPKIKLKSEHVRVIDGAKLR 1183
Query: 1015 IIPQ-VDRSKLHFELSSLKSMLPKIVVRGISTIERVLYNKEKIKGKNREGYQLFIEGTGL 1191
I P D+SKL EL +LKSMLPK++V+GI T+ER + N K K + Y L +EGT L
Sbjct: 1184 IYPTGTDKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPVKRPDKTLDRYNLLVEGTNL 1243
Query: 1192 LATIGTEGVDGCNTKSNFVKEVQEALGIEAARKCIIDEIEDVMDKSGMSIDIRHMMLLAD 1371
L +GT GVD TKSN + EV + LGIEAAR+ IIDEI + + M ID RHMMLLAD
Sbjct: 1244 LKVLGTPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRYTFESNNMIIDQRHMMLLAD 1303
Query: 1372 VMTSTGEALGISIFGLQKVKESVLMLASFEKAEHQLFNAAVNGREDNIEGVSECIIMGTP 1551
+MT GE LGI+ FG+ K+K SVLMLASFEK LFNA+ +GRED IEGVSECIIMG P
Sbjct: 1304 LMTYKGEVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASYSGREDEIEGVSECIIMGIP 1363
Query: 1552 IKIGTGILKVRQRVEHVHQLNYGVD 1626
+ +G+GILKVRQR++H+ + NY D
Sbjct: 1364 MTLGSGILKVRQRLDHLPEFNYQPD 1388