BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00005227
         (1090 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   569   e-160
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   559   e-157
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   556   e-156
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   554   e-155
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   553   e-155
ref|XP_007201816.1| hypothetical protein PRUPE_ppa008812mg [Prun...   544   e-152
ref|XP_007157771.1| hypothetical protein PHAVU_002G097400g [Phas...   542   e-152
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su...   541   e-151
ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-...   541   e-151
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su...   540   e-151
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype...   540   e-151
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su...   540   e-151
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, ...   538   e-150
gb|AFK41039.1| unknown [Medicago truncatula]                          536   e-150
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, ...   535   e-149
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su...   530   e-148
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   529   e-148
ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A...   528   e-147
ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi...   515   e-143
ref|XP_006409557.1| hypothetical protein EUTSA_v10022739mg [Eutr...   514   e-143

>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
            gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
            family protein [Theobroma cacao]
          Length = 318

 Score =  569 bits (1466), Expect = e-160
 Identities = 289/319 (90%), Positives = 301/319 (94%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG SYQRFPKVKIRE+KDDYAKFELRDTDAS+ANALRRVMIAEVPTIAIDLVEIE+NSS
Sbjct: 1    MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC TDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            TSKDL +SDHTVVP            EQRGIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  TSKDLYSSDHTVVPVDFTDSAGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEPEIHINED+METLTLEEK+++VESSPT+VFDIDPNTQQVVVVDPEAYTYD
Sbjct: 181  PAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            DEV+KKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIE+LK KLDAVRLS+D
Sbjct: 241  DEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  559 bits (1440), Expect = e-157
 Identities = 282/319 (88%), Positives = 299/319 (93%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEGASYQRFP++KIRE+KDDY KFELRDTDAS+ANALRRVMIAEVPT+AIDLVEIE+NSS
Sbjct: 1    MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQC++CSVEFHLRAKC TDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            TSKDL +SDHTVVP            EQRGIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEP+IHINEDLME+L+LEEK++WVESSPTKVFDIDPNTQQVVVVDPEAYTYD
Sbjct: 181  PAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            +EVIKKAE+MGKPGLV I AKEDSFIFTVESTGAIKASQLVLNAIEILK KLDAVRLS+D
Sbjct: 241  EEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
            gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
            RNA polymerases II, IV and V subunit 3-like [Citrus
            sinensis] gi|557524889|gb|ESR36195.1| hypothetical
            protein CICLE_v10028849mg [Citrus clementina]
          Length = 319

 Score =  556 bits (1434), Expect = e-156
 Identities = 285/320 (89%), Positives = 299/320 (93%), Gaps = 1/320 (0%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            M+GASYQRFPKVKIRE+KDDYAKFELRDTDAS+ANALRRVMIAEVPTIAIDLVEIE+NSS
Sbjct: 1    MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC +DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQ-RGIIIVKLRRGQELSLRAIARKGIGKDHAKW 604
            TSKDL +SDH+VVP            +Q RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 605  SPAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTY 784
            SPAATVTFMYEPEIHINEDLME+L+LEEK++WVESSPTKVFDIDPNT QV VVD EAYTY
Sbjct: 181  SPAATVTFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQVYVVDAEAYTY 240

Query: 785  DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSD 964
            DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIE+LK KLDAVRLS+
Sbjct: 241  DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE 300

Query: 965  DTVEGADDQFGELGAHMRGG 1024
            DTVE ADDQFGELGAHMRGG
Sbjct: 301  DTVE-ADDQFGELGAHMRGG 319


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  554 bits (1428), Expect = e-155
 Identities = 279/319 (87%), Positives = 298/319 (93%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG SYQRFPK+KIRE+KDDYAKFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIE+NSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC TD+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            TSKDLI+SDHTVVP            +++GIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  TSKDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEPEIHINEDLME+LTLEEK +WVESSPTKVFDID ++QQVVV D EAYTYD
Sbjct: 181  PAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            DEV+KKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAI++LK KLDAVRLS+D
Sbjct: 241  DEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
            vinifera]
          Length = 318

 Score =  553 bits (1425), Expect = e-155
 Identities = 278/319 (87%), Positives = 298/319 (93%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG SYQRFPK+KIRE+KDDYAKFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIE+NSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEFCSVEFHLRAKC TD+TLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            TSKDLI+SDHTVVP            +++GIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  TSKDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEPEIHINEDLME+LTLEEK +WVESSPTKVFDID ++QQVVV D EAYTYD
Sbjct: 181  PAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            DEV+KKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAI++LK KLDAVRLS+D
Sbjct: 241  DEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_007201816.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
            gi|462397216|gb|EMJ03015.1| hypothetical protein
            PRUPE_ppa008812mg [Prunus persica]
          Length = 318

 Score =  544 bits (1402), Expect = e-152
 Identities = 274/319 (85%), Positives = 294/319 (92%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG SYQR P+VKIREM+DDY KFELRDTDASVANALRRVMIAEVPT+AIDLVEIEINSS
Sbjct: 1    MEGKSYQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC +DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            TSKDL++SDHTVVP            EQ+GIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  TSKDLLSSDHTVVPVDFSDSAGMESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEP+I INE+LM+ LTL+EK+ WVESSPTKVFD DP T++V+VVDPEAYTYD
Sbjct: 181  PAATVTFMYEPDIRINEELMDMLTLDEKKAWVESSPTKVFDFDPKTEKVMVVDPEAYTYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            DEVIKKAEAMGKPGLV+I AKEDSFIFTVESTGA+KASQL+LNAIEILK KLDAVRLS+D
Sbjct: 241  DEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_007157771.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
            gi|561031186|gb|ESW29765.1| hypothetical protein
            PHAVU_002G097400g [Phaseolus vulgaris]
          Length = 318

 Score =  542 bits (1397), Expect = e-152
 Identities = 275/319 (86%), Positives = 293/319 (91%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEGASY R P+VKIRE+KDDYAKFELRDTDAS+ANALRRVMIAEVPTIAIDLVEIE+NSS
Sbjct: 1    MEGASYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLR KC TDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            +SKDL +SD +VVP            E RG+IIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  SSKDLYSSDPSVVPVDFSDPASTDSSESRGVIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEPEIH+NEDLMETLTLEEKR WV+SSPT+VF+IDP TQQV+VVD EAY+YD
Sbjct: 181  PAATVTFMYEPEIHLNEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDSEAYSYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            DEVIKKAEAMGKPGLVEI A++DSFIFTVESTGAIK+SQLVLNAIEILK KLDAVRLS+D
Sbjct: 241  DEVIKKAEAMGKPGLVEIIARQDSFIFTVESTGAIKSSQLVLNAIEILKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  541 bits (1393), Expect = e-151
 Identities = 273/319 (85%), Positives = 295/319 (92%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG SYQRFP+VKIREM+ DY KFELRDTDASVANALRRVMIAEVPT+AIDLVEIEINSS
Sbjct: 1    MEGKSYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTS+RAMSMRFSRDCDACDGDGQCE+CSVEFHLRA+C +DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            TSK+L++SDHTVVP            EQRGIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  TSKELLSSDHTVVPVDFSDASGYEASEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEP+I INE++M+TL+LE+K  WV+SSPTKVF+IDPNT +VVVVDPEAYTYD
Sbjct: 181  PAATVTFMYEPDIRINEEMMDTLSLEDKAAWVDSSPTKVFEIDPNTGKVVVVDPEAYTYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            DEVIKKAEAMGKPGLV+I AKEDSFIFTVESTGAIKASQL+LNAIEILK KLDAVRLS+D
Sbjct: 241  DEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEILKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula]
            gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
            [Medicago truncatula] gi|355508950|gb|AES90092.1|
            DNA-directed RNA polymerase II subunit RPB3-A [Medicago
            truncatula]
          Length = 318

 Score =  541 bits (1393), Expect = e-151
 Identities = 271/319 (84%), Positives = 294/319 (92%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEGASY R P+VKIRE+KDDY KFELRDTDASVANALRRVMI+EVPT+AIDLVEIE+NSS
Sbjct: 1    MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC TDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            +SKDLI+SDHTV P            + RGIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  SSKDLISSDHTVTPVDVPGGDASIESDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEP+IHINEDLME+LTLEEK+ WV+SSPT+VFDIDP TQQV+VVDPEAY+YD
Sbjct: 181  PAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYSYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            DEVIKKAEAMGKPGL+EI AK+DSFIFTVESTGA+KASQL+LN+IEILK KLDAVRLS+D
Sbjct: 241  DEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer
            arietinum]
          Length = 319

 Score =  540 bits (1392), Expect = e-151
 Identities = 276/320 (86%), Positives = 293/320 (91%), Gaps = 1/320 (0%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEGASY R P+VKIRE+KDDY KFELRDTDASVANALRRVMI+EVPTIAIDLVEIE+NSS
Sbjct: 1    MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR KC TDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQ-RGIIIVKLRRGQELSLRAIARKGIGKDHAKW 604
            TSKDL +SDHTVVP               RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLYSSDHTVVPVDFSADPSSLESSDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 605  SPAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTY 784
            SPAATVTFMYEP+IHINEDLME+LTLEEKR WV+SSPT+VFDIDP TQQV+VVDPEAY+Y
Sbjct: 181  SPAATVTFMYEPDIHINEDLMESLTLEEKREWVDSSPTRVFDIDPVTQQVMVVDPEAYSY 240

Query: 785  DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSD 964
            DDEVIKKAEAMGKPGLVEI AK+DSFIFTVESTGA+KASQL+LNAIEILK KLDAVRLS+
Sbjct: 241  DDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEILKQKLDAVRLSE 300

Query: 965  DTVEGADDQFGELGAHMRGG 1024
            DTVE ADDQFGELGAHMRGG
Sbjct: 301  DTVE-ADDQFGELGAHMRGG 319


>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
            [Populus trichocarpa] gi|550331423|gb|EEE87820.2|
            DNA-directed RNA polymerase II 36 kDa polypeptide B
            family protein [Populus trichocarpa]
          Length = 323

 Score =  540 bits (1390), Expect = e-151
 Identities = 278/324 (85%), Positives = 290/324 (89%), Gaps = 5/324 (1%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            ME  SYQRFPK+KIREMKDDY KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIE+NSS
Sbjct: 1    MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCE+CSVEFHLRAKC TDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXX-----EQRGIIIVKLRRGQELSLRAIARKGIGKD 592
            TSKDL +SDH V+P                  QRGIIIVKLRRGQEL LRAIARKGIGKD
Sbjct: 121  TSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKGIGKD 180

Query: 593  HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPE 772
            HAKWSPAATVTFMYEPEIHINEDLMETLTLEEK +W+ESSPTKVFDID  TQQVVVVDPE
Sbjct: 181  HAKWSPAATVTFMYEPEIHINEDLMETLTLEEKLSWIESSPTKVFDIDKVTQQVVVVDPE 240

Query: 773  AYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAV 952
            AYTYDDEVIKKAEAMGK GL++I AKEDSFIFTVESTGA+KASQLVLNAIEILK KLDAV
Sbjct: 241  AYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAV 300

Query: 953  RLSDDTVEGADDQFGELGAHMRGG 1024
            RLSDDTVE ADDQFGELG HMRGG
Sbjct: 301  RLSDDTVE-ADDQFGELGVHMRGG 323


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Cucumis sativus]
          Length = 320

 Score =  540 bits (1390), Expect = e-151
 Identities = 276/321 (85%), Positives = 293/321 (91%), Gaps = 2/321 (0%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG+SYQRFPKVKIRE++DDYAKFELRDTDAS+ANALRRVMIAEVPTIAIDLVEIE+NSS
Sbjct: 1    MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC +DQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXX--EQRGIIIVKLRRGQELSLRAIARKGIGKDHAK 601
            TSKDL +SDHTVVP              + +GIIIVKLRRGQEL LRAIARKGIGKDHAK
Sbjct: 121  TSKDLYSSDHTVVPVDFSDSAAATGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAK 180

Query: 602  WSPAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYT 781
            WSPAATVTFMYEP IHINEDLMETLTLEEKR WVES PT+VF++D  T QV+VVDPEAYT
Sbjct: 181  WSPAATVTFMYEPSIHINEDLMETLTLEEKRTWVESCPTRVFELDTVTHQVMVVDPEAYT 240

Query: 782  YDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLS 961
            YDDEVIKKAEAMGK GLV+I A+EDSFIFTVESTGAIKASQL+LNAI+ILK KLDAVRLS
Sbjct: 241  YDDEVIKKAEAMGKAGLVDITAREDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS 300

Query: 962  DDTVEGADDQFGELGAHMRGG 1024
            DDTVE ADDQFGELGAHMRGG
Sbjct: 301  DDTVE-ADDQFGELGAHMRGG 320


>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
            [Glycine max]
          Length = 319

 Score =  538 bits (1387), Expect = e-150
 Identities = 273/317 (86%), Positives = 288/317 (90%)
 Frame = +2

Query: 74   GASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSSVL 253
            G SY R P+VKIRE+KDDYAKFELRDTDAS+ANALRRVMIAEVPT+AIDLVEIE+NSSVL
Sbjct: 4    GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63

Query: 254  NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDVTS 433
            NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLR KC TDQTLDVTS
Sbjct: 64   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123

Query: 434  KDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWSPA 613
            KDL +SD TV P              RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSPA
Sbjct: 124  KDLYSSDPTVSPVDFSDPSATDSDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPA 183

Query: 614  ATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYDDE 793
            ATVTFMYEPEIHINEDLMETLTLEEKR WV+SSPT+VF+IDP TQQV+VVD EAYTYDDE
Sbjct: 184  ATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDDE 243

Query: 794  VIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDDTV 973
            V+KKAEAMGKPGLVEI A++DSFIFTVESTGA+KASQLVLNAIEILK KLDAVRLS+DTV
Sbjct: 244  VLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDTV 303

Query: 974  EGADDQFGELGAHMRGG 1024
            E ADDQFGELGAHMRGG
Sbjct: 304  E-ADDQFGELGAHMRGG 319


>gb|AFK41039.1| unknown [Medicago truncatula]
          Length = 318

 Score =  536 bits (1381), Expect = e-150
 Identities = 270/319 (84%), Positives = 293/319 (91%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEGASY R P+VKIRE+KDDY KFELRDTDASVANALRRVMI+EVPT+AIDLVEIE+NSS
Sbjct: 1    MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLR K  TDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKRITDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXEQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWS 607
            +SKDLI+SDHTV P            + RGIIIVKLRRGQEL LRAIARKGIGKDHAKWS
Sbjct: 121  SSKDLISSDHTVTPVDVPGGDASIESDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180

Query: 608  PAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYD 787
            PAATVTFMYEP+IHINEDLME+LTLEEK+ WV+SSPT+VFDIDP TQQV+VVDPEAY+YD
Sbjct: 181  PAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYSYD 240

Query: 788  DEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDD 967
            DEVIKKAEAMGKPGL+EI AK+DSFIFTVESTGA+KASQL+LN+IEILK KLDAVRLS+D
Sbjct: 241  DEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEILKQKLDAVRLSED 300

Query: 968  TVEGADDQFGELGAHMRGG 1024
            TVE ADDQFGELGAHMRGG
Sbjct: 301  TVE-ADDQFGELGAHMRGG 318


>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Glycine max]
          Length = 320

 Score =  535 bits (1377), Expect = e-149
 Identities = 273/318 (85%), Positives = 289/318 (90%), Gaps = 1/318 (0%)
 Frame = +2

Query: 74   GASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSSVL 253
            G SY R P+VKIRE+KDDYAKFELRDTDAS+ANALRRVMIAEVPT+AIDLVEIE+NSSVL
Sbjct: 4    GVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSSVL 63

Query: 254  NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDVTS 433
            NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLR KC TDQTLDVTS
Sbjct: 64   NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDVTS 123

Query: 434  KDLITSDHTVVPCXXXXXXXXXXXEQ-RGIIIVKLRRGQELSLRAIARKGIGKDHAKWSP 610
            KDL +SD TV P            +  RGIIIVKLRRGQEL LRAIARKGIGKDHAKWSP
Sbjct: 124  KDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSP 183

Query: 611  AATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYDD 790
            AATVTFMYEPEIHINEDLMETLTLEEKR WV+SSPT+VF+IDP TQQV+VVD EAYTYDD
Sbjct: 184  AATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDD 243

Query: 791  EVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDDT 970
            EV+KKAEAMGKPGLVEI A++DSFIFTVESTGA+KASQLVLNAIEILK KLDAVRLS+DT
Sbjct: 244  EVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDT 303

Query: 971  VEGADDQFGELGAHMRGG 1024
            VE ADDQFGELGAHMRGG
Sbjct: 304  VE-ADDQFGELGAHMRGG 320


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Solanum lycopersicum]
          Length = 319

 Score =  530 bits (1366), Expect = e-148
 Identities = 266/320 (83%), Positives = 292/320 (91%), Gaps = 1/320 (0%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG SYQRFPK+K+RE+KDD+ KFELRDTDAS+ANALRR+MIAEVPTIAIDLVEIE+NSS
Sbjct: 1    MEGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFI+HRLGL+PLTSERAMSMRFSRDCDACDGDGQCE+CSVEF+LR KC +DQTLDV
Sbjct: 61   VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXE-QRGIIIVKLRRGQELSLRAIARKGIGKDHAKW 604
            TSKDL++SDHTVVP               +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLLSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 605  SPAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTY 784
            SPAATVTFMYEPEI+INED+ME+LTLEEK   VESSPTKVF IDP  +QV+VVDPEAYTY
Sbjct: 181  SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240

Query: 785  DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSD 964
            DDEV+KKAEAMGKPG+VEI+AKEDSFIFTVE+TGA+KASQLVLNAIE+LK KLDAVRLSD
Sbjct: 241  DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300

Query: 965  DTVEGADDQFGELGAHMRGG 1024
            DTVE ADDQFGELGAHMRGG
Sbjct: 301  DTVE-ADDQFGELGAHMRGG 319


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
            [Solanum tuberosum]
          Length = 319

 Score =  529 bits (1363), Expect = e-148
 Identities = 266/320 (83%), Positives = 292/320 (91%), Gaps = 1/320 (0%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG SYQRFPK+KIRE+KDD+ KFELR+TDAS+ANALRR+MIAEVPTIAIDLVEIE+NSS
Sbjct: 1    MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFI+HRLGL+PLTSERAMSMRFSRDCDACDGDGQCE+CSVEF+LR KC +DQTLDV
Sbjct: 61   VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXXE-QRGIIIVKLRRGQELSLRAIARKGIGKDHAKW 604
            TSKDL++SDHTVVP               +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSKDLLSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 605  SPAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTY 784
            SPAATVTFMYEPEI+INED+ME+LTLEEK   VESSPTKVF IDP  +QV+VVDPEAYTY
Sbjct: 181  SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240

Query: 785  DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSD 964
            DDEV+KKAEAMGKPG+VEI+AKEDSFIFTVE+TGA+KASQLVLNAIE+LK KLDAVRLSD
Sbjct: 241  DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300

Query: 965  DTVEGADDQFGELGAHMRGG 1024
            DTVE ADDQFGELGAHMRGG
Sbjct: 301  DTVE-ADDQFGELGAHMRGG 319


>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
            gi|548856809|gb|ERN14637.1| hypothetical protein
            AMTR_s00038p00194050 [Amborella trichopoda]
          Length = 324

 Score =  528 bits (1360), Expect = e-147
 Identities = 269/323 (83%), Positives = 288/323 (89%), Gaps = 4/323 (1%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            MEG SYQRFPKVKIREMKDDY KFELR+TD S+ANALRR+M+AEVPTIAIDLVEIE NSS
Sbjct: 1    MEGVSYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEF+AHRLGLIPLTSE+AMSMRFSRDCDACDGDGQCE+CSVEF L  KC +DQTLDV
Sbjct: 61   VLNDEFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXX----EQRGIIIVKLRRGQELSLRAIARKGIGKDH 595
            TS DL++SD  V+P                EQRGIIIVKLRRGQEL LRAIARKGIGKDH
Sbjct: 121  TSADLVSSDIHVIPVDVAGRGMDSNGFDASEQRGIIIVKLRRGQELRLRAIARKGIGKDH 180

Query: 596  AKWSPAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEA 775
            AKWSP ATVTFMYEPEIHIN+DLMETL+L+EKR WVESSPT+VFDIDPNT QVVVVDPEA
Sbjct: 181  AKWSPGATVTFMYEPEIHINDDLMETLSLDEKREWVESSPTRVFDIDPNTHQVVVVDPEA 240

Query: 776  YTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVR 955
            YTYDDEVIKKAEAMGKPGLVEIYA+EDSFIFTVESTGAIKASQLV+NAIE+LK KLDAVR
Sbjct: 241  YTYDDEVIKKAEAMGKPGLVEIYAREDSFIFTVESTGAIKASQLVINAIEVLKQKLDAVR 300

Query: 956  LSDDTVEGADDQFGELGAHMRGG 1024
            LS DT EG D+QFGELGAHMRGG
Sbjct: 301  LSLDTEEG-DEQFGELGAHMRGG 322


>ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi|297329735|gb|EFH60154.1|
            RBP36A [Arabidopsis lyrata subsp. lyrata]
          Length = 319

 Score =  515 bits (1326), Expect = e-143
 Identities = 263/320 (82%), Positives = 289/320 (90%), Gaps = 1/320 (0%)
 Frame = +2

Query: 68   MEGASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSS 247
            M+GA+YQRFPK+ IRE+KDDYAKFELR+TD S+ANALRRVMI+EVPT+AIDLVEIE+NSS
Sbjct: 1    MDGATYQRFPKITIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 248  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDV 427
            VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEF L AKC TDQTLDV
Sbjct: 61   VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV 120

Query: 428  TSKDLITSDHTVVPCXXXXXXXXXXX-EQRGIIIVKLRRGQELSLRAIARKGIGKDHAKW 604
            TS+DL ++D TV P             EQ+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121  TSRDLYSADPTVTPVDFTIDSSASDSSEQKGIIIVKLRRGQELKLRAIARKGIGKDHAKW 180

Query: 605  SPAATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTY 784
            SPAATVTFMYEP+I INED+M+TL+ EEK + +ESSPTKVF IDP T+QVVVVDPEAYTY
Sbjct: 181  SPAATVTFMYEPDIIINEDMMDTLSDEEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTY 240

Query: 785  DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSD 964
            D+EVIKKAEAMGKPGL+EI+ K+DSFIFTVESTGA+KASQLVLNAI+ILK KLDAVRLSD
Sbjct: 241  DEEVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSD 300

Query: 965  DTVEGADDQFGELGAHMRGG 1024
            DTVE ADDQFGELGAHMRGG
Sbjct: 301  DTVE-ADDQFGELGAHMRGG 319


>ref|XP_006409557.1| hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum]
            gi|557110719|gb|ESQ51010.1| hypothetical protein
            EUTSA_v10022739mg [Eutrema salsugineum]
          Length = 369

 Score =  514 bits (1323), Expect = e-143
 Identities = 262/318 (82%), Positives = 289/318 (90%), Gaps = 1/318 (0%)
 Frame = +2

Query: 74   GASYQRFPKVKIREMKDDYAKFELRDTDASVANALRRVMIAEVPTIAIDLVEIEINSSVL 253
            GASYQRFPKVKIRE+KDDYAKFELR+TD S+ANALRRVMI+EVPT+AIDLVEI+INSSVL
Sbjct: 53   GASYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIDINSSVL 112

Query: 254  NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCRTDQTLDVTS 433
            NDEFIAHRLGLIPLTSERAMSMR SRDCD+CDGDGQCEFCSVEF L+AKC TDQTLDVTS
Sbjct: 113  NDEFIAHRLGLIPLTSERAMSMRLSRDCDSCDGDGQCEFCSVEFRLQAKCVTDQTLDVTS 172

Query: 434  KDLITSDHTVVPCXXXXXXXXXXX-EQRGIIIVKLRRGQELSLRAIARKGIGKDHAKWSP 610
            +DL ++D TV P             EQRGIIIVKLRRGQEL LRAIARKGIGKDHAKWSP
Sbjct: 173  RDLYSTDPTVTPVDFTLDSSGTDSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSP 232

Query: 611  AATVTFMYEPEIHINEDLMETLTLEEKRNWVESSPTKVFDIDPNTQQVVVVDPEAYTYDD 790
            A+TVTFMYEP+I+INED+M+TLT +EK + +ESSPTKVF IDP T+QVVVVDPEAYTYD+
Sbjct: 233  ASTVTFMYEPDININEDMMDTLTEDEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTYDE 292

Query: 791  EVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKTKLDAVRLSDDT 970
            EVIKKAEAMGKPGL+EI+ K+DSFIFTVESTGA+KASQLVLNAI+ILK KLDAVRLSDDT
Sbjct: 293  EVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSDDT 352

Query: 971  VEGADDQFGELGAHMRGG 1024
            VE ADDQFGELGAH+RGG
Sbjct: 353  VE-ADDQFGELGAHLRGG 369