BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00004390
         (215 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil...   114   1e-23
emb|CBI28035.3| unnamed protein product [Vitis vinifera]              112   7e-23
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...   112   7e-23
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I...   110   2e-22
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I...   110   3e-22
gb|AFK41303.1| unknown [Medicago truncatula]                          110   3e-22
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ...   110   3e-22
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [...   109   3e-22
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun...   107   2e-21
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus...   107   2e-21
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I...   107   2e-21
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun...   106   3e-21
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin...   106   3e-21
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...   106   3e-21
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a...   106   4e-21
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...   106   4e-21
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   105   5e-21
gb|AFK38034.1| unknown [Lotus japonicus]                              105   6e-21
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A...   104   1e-20
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun...   103   2e-20

>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  114 bits (285), Expect = 1e-23
 Identities = 57/72 (79%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M K QFI KYGEN+KREDLVINKTKR +N +QIYVFFP+EAKVGVKT+KTYTN
Sbjct: 29  VGDFEITMTKAQFISKYGENMKREDLVINKTKRNDNSDQIYVFFPDEAKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RMKSENV RA+L
Sbjct: 89  RMKSENVFRAVL 100


>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/72 (76%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKR-GNNEQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M KHQF+ K+GEN+KREDLVINK KR  +++QIYVFFPEE KVGVKT+KTYTN
Sbjct: 9   VGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGVKTMKTYTN 68

Query: 178 RMKSENVSRAIL 213
           RMKSENV RAIL
Sbjct: 69  RMKSENVFRAIL 80


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/72 (76%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKR-GNNEQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M KHQF+ K+GEN+KREDLVINK KR  +++QIYVFFPEE KVGVKT+KTYTN
Sbjct: 29  VGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RMKSENV RAIL
Sbjct: 89  RMKSENVFRAIL 100


>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 206

 Score =  110 bits (276), Expect = 2e-22
 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGN-NEQIYVFFPEEAKVGVKTLKTYTN 177
           V D+E+ M KH+F EKYGEN+KREDLVINKTK+   ++QIYVFFPEE KVGVKT+KTYTN
Sbjct: 29  VGDFEVNMSKHEFKEKYGENMKREDLVINKTKKDKPSDQIYVFFPEEVKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RM SENV RAIL
Sbjct: 89  RMNSENVYRAIL 100


>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 206

 Score =  110 bits (274), Expect = 3e-22
 Identities = 55/72 (76%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGN-NEQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M KHQF EKYGEN+KREDLVINKTK+   ++QIYVFFPEE KVGVKT+KTY N
Sbjct: 29  VGDFEINMSKHQFKEKYGENMKREDLVINKTKKDKPSDQIYVFFPEEVKVGVKTMKTYIN 88

Query: 178 RMKSENVSRAIL 213
           RM SENV RAIL
Sbjct: 89  RMNSENVYRAIL 100


>gb|AFK41303.1| unknown [Medicago truncatula]
          Length = 206

 Score =  110 bits (274), Expect = 3e-22
 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGN-NEQIYVFFPEEAKVGVKTLKTYTN 177
           V D+E+ M KH F +KYGEN+KREDLVINKTK+   ++QIYVFFPEEAKVGVKT+KTYTN
Sbjct: 29  VGDFELNMSKHDFKDKYGENMKREDLVINKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RM SENV RAIL
Sbjct: 89  RMNSENVYRAIL 100


>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|355511987|gb|AES93610.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 [Medicago truncatula]
          Length = 410

 Score =  110 bits (274), Expect = 3e-22
 Identities = 54/72 (75%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGN-NEQIYVFFPEEAKVGVKTLKTYTN 177
           V D+E+ M KH F +KYGEN+KREDLVINKTK+   ++QIYVFFPEEAKVGVKT+KTYTN
Sbjct: 233 VGDFELNMSKHDFKDKYGENMKREDLVINKTKKDKPSDQIYVFFPEEAKVGVKTMKTYTN 292

Query: 178 RMKSENVSRAIL 213
           RM SENV RAIL
Sbjct: 293 RMNSENVYRAIL 304


>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 206

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/72 (76%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI+M + QF  KYG N+KREDLVINKTKR ++ +QIYVFFPEEAKVGVKT+KTYTN
Sbjct: 29  VGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSSDQIYVFFPEEAKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RMKSENV RAIL
Sbjct: 89  RMKSENVFRAIL 100


>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
           gi|462414880|gb|EMJ19617.1| hypothetical protein
           PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score =  107 bits (267), Expect = 2e-21
 Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M + QF  KYGEN+KREDL INKTKR ++ +QIYVFFPEE KVGVKT+KTYTN
Sbjct: 29  VGDFEINMTREQFKSKYGENMKREDLTINKTKRSDSSDQIYVFFPEEPKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RMKSENV RA+L
Sbjct: 89  RMKSENVLRAVL 100


>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
          Length = 206

 Score =  107 bits (266), Expect = 2e-21
 Identities = 51/72 (70%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI+M K+QF++KYGEN+KREDLVINK  R N+ +QIY+FFPEE KVGVKT+KTYTN
Sbjct: 29  VGDFEIDMTKYQFLQKYGENMKREDLVINKGLRNNSSDQIYIFFPEEPKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RMK E V RA+L
Sbjct: 89  RMKEEGVHRAVL 100


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Solanum lycopersicum]
           gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           isoform 2 [Solanum lycopersicum]
          Length = 206

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/72 (72%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M KHQF++KYGEN+KREDLVI K KR N+ +QIYVFFPEE KVGVKT+KTYT 
Sbjct: 29  VGDFEINMSKHQFLQKYGENMKREDLVIQKAKRNNSSDQIYVFFPEEPKVGVKTMKTYTE 88

Query: 178 RMKSENVSRAIL 213
           RMK E+V +AIL
Sbjct: 89  RMKKEDVFQAIL 100


>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
           gi|462416214|gb|EMJ20951.1| hypothetical protein
           PRUPE_ppa024345mg [Prunus persica]
          Length = 206

 Score =  106 bits (265), Expect = 3e-21
 Identities = 52/72 (72%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M + QF  KYGEN+KREDL INKTKR ++ +Q+YVFFPEE KVGVKT+KTYTN
Sbjct: 29  VGDFEINMTREQFKAKYGENMKREDLTINKTKRNDSTDQLYVFFPEEPKVGVKTIKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RMKS+NV+RAIL
Sbjct: 89  RMKSDNVARAIL 100


>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
           gi|255627545|gb|ACU14117.1| unknown [Glycine max]
          Length = 206

 Score =  106 bits (265), Expect = 3e-21
 Identities = 52/72 (72%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M KH+F  KYGE++KREDLVINK+K+ N+ +QIYVFFP+E KVGVKT+KTYTN
Sbjct: 29  VGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RM SENV RAIL
Sbjct: 89  RMNSENVYRAIL 100


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score =  106 bits (265), Expect = 3e-21
 Identities = 52/72 (72%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M KH+F  KYGE++KREDLVINK+K+ N+ +QIYVFFP+E KVGVKT+KTYTN
Sbjct: 29  VGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RM SENV RAIL
Sbjct: 89  RMNSENVYRAIL 100


>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/72 (70%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M KHQF++KYGEN+KREDLV+ K KR N+ +QIYVFFPEE KVGVKT+KTYT 
Sbjct: 29  VGDFEINMSKHQFLQKYGENMKREDLVLQKAKRNNSSDQIYVFFPEEPKVGVKTMKTYTE 88

Query: 178 RMKSENVSRAIL 213
           RMK E+V +AIL
Sbjct: 89  RMKKEDVFQAIL 100


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score =  106 bits (264), Expect = 4e-21
 Identities = 52/72 (72%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI+M + QF +KYGEN+KRED+VINK+KR ++ +QIYVFFPEEAKVG+K LKTYT 
Sbjct: 29  VGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTT 88

Query: 178 RMKSENVSRAIL 213
           RMKSENV RAIL
Sbjct: 89  RMKSENVFRAIL 100


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M K QFI K+GEN+KREDLVINK  R ++ +QIYVFFP+E KVGVKT+KTYTN
Sbjct: 29  VGDFEINMSKEQFIAKFGENMKREDLVINKALRNDSSDQIYVFFPDEQKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RMKSENV RAIL
Sbjct: 89  RMKSENVFRAIL 100


>gb|AFK38034.1| unknown [Lotus japonicus]
          Length = 206

 Score =  105 bits (262), Expect = 6e-21
 Identities = 51/72 (70%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKR-GNNEQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M +H+F  KYG+N+KREDL INKTK+ G ++QIYVFFP+E KVGVKT+KTYTN
Sbjct: 29  VGDFEINMSRHEFKTKYGDNMKREDLTINKTKKDGPSDQIYVFFPDEPKVGVKTMKTYTN 88

Query: 178 RMKSENVSRAIL 213
           RM SENV RAIL
Sbjct: 89  RMNSENVFRAIL 100


>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
           gi|548863022|gb|ERN20377.1| hypothetical protein
           AMTR_s00068p00034280 [Amborella trichopoda]
          Length = 206

 Score =  104 bits (260), Expect = 1e-20
 Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGN-NEQIYVFFPEEAKVGVKTLKTYTN 177
           V D+EI M K QFIEK+G+ +K++DLVINKT R N +EQIYVFFPEE KVGVKT+KTYT 
Sbjct: 29  VGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNNPSEQIYVFFPEEQKVGVKTVKTYTE 88

Query: 178 RMKSENVSRAIL 213
           RMKSENV RAIL
Sbjct: 89  RMKSENVFRAIL 100


>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/72 (69%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = +1

Query: 1   VTDYEIEMKKHQFIEKYGENLKREDLVINKTKRGNN-EQIYVFFPEEAKVGVKTLKTYTN 177
           V D+E+ M K QF  KYGEN+KREDL+INK++R ++ +QIYVFFPEE KVGVKT+KTY N
Sbjct: 29  VGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDSPDQIYVFFPEEQKVGVKTMKTYIN 88

Query: 178 RMKSENVSRAIL 213
           RMKSENV RA+L
Sbjct: 89  RMKSENVLRAVL 100