BLASTX nr result
ID: Paeonia22_contig00004242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00004242
(1217 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 60 6e-19
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 50 7e-11
ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296... 59 3e-10
ref|XP_004310263.1| PREDICTED: uncharacterized protein LOC101298... 67 1e-08
ref|XP_004971816.1| PREDICTED: uncharacterized protein LOC101779... 45 1e-08
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G... 51 1e-08
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo... 51 1e-08
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 44 5e-08
emb|CAN69706.1| hypothetical protein VITISV_037595 [Vitis vinifera] 42 1e-07
ref|XP_003635371.1| PREDICTED: uncharacterized protein LOC100853... 52 1e-07
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 40 3e-07
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera] 35 5e-07
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 40 6e-07
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 46 6e-07
emb|CAN78270.1| hypothetical protein VITISV_006712 [Vitis vinifera] 37 7e-07
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 41 1e-06
emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera] 45 2e-06
ref|XP_004300970.1| PREDICTED: uncharacterized protein LOC101292... 60 2e-06
emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera] 44 2e-06
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 37 2e-06
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 60.1 bits (144), Expect(3) = 6e-19
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTKGDTGASNHVIADL 808
CQIC GH AI+C +R+N++YEGRVP+ +L A+ A S + DTGA++HV +L
Sbjct: 304 CQICSRPGHSAIDCFNRLNLSYEGRVPSSRLNAMTAHHSPSEETWLTDTGANSHVTPNL 362
Score = 55.5 bits (132), Expect(3) = 6e-19
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Frame = +1
Query: 889 ILCCPNVSANILSL------SICFFVLFPFPNYFLVKNLSSARTLFKGPCCSGLYPIHI- 1047
IL CP+ S N+LS+ + C+F+ +P NYF VK+L + + L+ G +GLYP
Sbjct: 408 ILHCPSASTNLLSVYKFTIDNHCYFIFYP--NYFCVKDLKTGKMLYHGKSENGLYPFRFP 465
Query: 1048 GXXXXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLITTR 1170
R A+ WHS L H + +I+ +++ +
Sbjct: 466 SKTSKVSSSLAYVSSRVSAETWHSRLGHASSTIVSKVLSNK 506
Score = 26.6 bits (57), Expect(3) = 6e-19
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 819 YKGTSQVA-VGNDSGLPITHVGSS 887
YKG + + +DSGL I H+GSS
Sbjct: 371 YKGLDNLGGINSDSGLSIKHIGSS 394
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 49.7 bits (117), Expect(3) = 7e-11
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAA--SSSFNNGGTKGDTGASNHVIAD 805
CQIC GH AI+C R + +Y+GR P Q L A+ A +++F++ D+GA+ H+ +D
Sbjct: 275 CQICGKSGHTAIDCFHRFDYSYQGRFPPQDLAAMVAETNATFDHQVWYMDSGANAHITSD 334
Score = 41.6 bits (96), Expect(3) = 7e-11
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Frame = +1
Query: 889 ILCCPNVSANILSLSI------CFFVLFPFPNYFLVKNLSSARTLFKGPCCSGLYPIH-- 1044
IL CP + N++S++ C+F+L N F+VK + R L +G +GLYP+
Sbjct: 380 ILHCPQAATNLISINQFCLDNNCYFILTA--NGFVVKENLTGRILLQGVVENGLYPLAGC 437
Query: 1045 IGXXXXXXXXXXXXXVRTGADAWHSCLAH 1131
VR AD WHS L H
Sbjct: 438 KTFHKSLTCLSTTIGVRANADTWHSRLGH 466
Score = 23.1 bits (48), Expect(3) = 7e-11
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 810 QNDYKGTSQVAVGNDSGLPITHVGSS 887
Q + + V VGN SGL + + GS+
Sbjct: 341 QQPFCESETVTVGNGSGLQVLNTGST 366
>ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296391 [Fragaria vesca
subsp. vesca]
Length = 323
Score = 59.3 bits (142), Expect(3) = 3e-10
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Frame = +2
Query: 533 MNEGRGSSPRG----SSNLXXXXXXXXXXXXXXXXXXCQICDCLGHKAINCHDRMNMAYE 700
+N GRG+S G SS+L CQIC GH A++C++R+N++++
Sbjct: 155 LNRGRGASVLGPHPSSSSLFNNQARPT----------CQICSKTGHTALDCYNRLNLSFQ 204
Query: 701 GRVPTQKLLALAASSSFNNGGT-KGDTGASNHVIADL 808
GRVP++ L A+AAS S T D+GA++H+ +DL
Sbjct: 205 GRVPSRNLSAMAASGSTPAPPTWLLDSGANSHITSDL 241
Score = 28.5 bits (62), Expect(3) = 3e-10
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 6/39 (15%)
Frame = +1
Query: 889 ILCCPNVSANILSL------SICFFVLFPFPNYFLVKNL 987
IL CP+ S N+LS+ + CF ++ +P++F++K++
Sbjct: 287 ILHCPSASTNLLSIYRFTSDNNCFMLI--YPDHFIIKDI 323
Score = 24.6 bits (52), Expect(3) = 3e-10
Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +3
Query: 816 DYKGTSQVA-VGNDSGLPITHVGSS 887
+Y+G +V +GN++ L I+H GS+
Sbjct: 249 EYQGNDRVGGIGNETPLSISHTGST 273
>ref|XP_004310263.1| PREDICTED: uncharacterized protein LOC101298676 [Fragaria vesca
subsp. vesca]
Length = 478
Score = 67.4 bits (163), Expect = 1e-08
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Frame = +2
Query: 476 PRCQICDRLGHTVINCYNRMNEGRGSSPRGSSNLXXXXXXXXXXXXXXXXXXCQICDCLG 655
P CQIC + GHT +NC+ R++ P S CQIC G
Sbjct: 342 PECQICSKKGHTAVNCFYRVDI-LADHPSKS------------------VVVCQICGLKG 382
Query: 656 HKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTK-------------GDTGASNHV 796
H A++C R N AY+G P L A+ AS+S NGG G+TGA++H+
Sbjct: 383 HVALDCQHRSNYAYQGAEPPTSLTAMTASTS--NGGASSSTQSHSVDDIWIGNTGATHHM 440
Query: 797 IADL 808
+DL
Sbjct: 441 TSDL 444
>ref|XP_004971816.1| PREDICTED: uncharacterized protein LOC101779238, partial [Setaria
italica]
Length = 1281
Score = 44.7 bits (104), Expect(3) = 1e-08
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Frame = +1
Query: 871 PTLVLPILCCPNVSANILS---LSICFFVLFPF-PNYFLVKNLSSARTLFKGPCCSGLYP 1038
P + +L P++S ++LS L+ V F F P +FL+K+L+ + L +G C +GLYP
Sbjct: 230 PLALENVLHIPDISKHLLSIHKLAHDNHVFFEFHPYHFLIKDLAMRQILLEGKCEAGLYP 289
Query: 1039 IHIGXXXXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYH 1155
I + V+ D WH+ H + MY+
Sbjct: 290 IKL--YDIESFKQALIHVKMSTDQWHARFGHPSTQWMYN 326
Score = 36.2 bits (82), Expect(3) = 1e-08
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Frame = +2
Query: 542 GRGSSP-----RGSSNLXXXXXXXXXXXXXXXXXXCQICDCLGHKAINCHDRMNMAYEGR 706
G G+SP RGS+ CQIC +GH A+ C M+ +Y+
Sbjct: 100 GHGASPGRGRGRGSAPFQGCGGRSTPRYDMPKCPPCQICGRVGHTAVKCWYLMDESYQDE 159
Query: 707 VPTQKLLALAASSSFN--NGGTKGDTGASNHVIADL 808
P A AA+++F + +T A++H+ +DL
Sbjct: 160 QP----FATAATTTFYKVDPNWYTNTRATDHITSDL 191
Score = 25.4 bits (54), Expect(3) = 1e-08
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 810 QNDYKGTSQVAVGNDSGLPITHVGS 884
+ Y G V VGN + L I H+GS
Sbjct: 197 REQYNGGETVQVGNGAHLHIMHIGS 221
>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 572
Score = 50.8 bits (120), Expect(3) = 1e-08
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +2
Query: 503 GHTVINCYNRMNEGRGSSPRGSSNLXXXXXXXXXXXXXXXXXXCQICDCLGHKAINCHDR 682
GH N +N GRG RG CQ+CD LGH + C+ R
Sbjct: 192 GHGQPNQGQNLNRGRGGQGRGRGGFTNNQGGDHPK--------CQLCDKLGHTVVKCYKR 243
Query: 683 MNMAYEGRVPTQKLLALAASSSFNNG-GTKGDTGASNHVIADLAK 814
+ ++ G ++ A AA+SS+ G DTGA++H+ +DL K
Sbjct: 244 FDASFTG----EEKSAAAATSSYGVGTNWYIDTGATDHITSDLDK 284
Score = 33.1 bits (74), Expect(3) = 1e-08
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +1
Query: 889 ILCCPNVSANILSLSICFF----VLFPFPNYFLVKNLSSARTLFKGPCCSGLYPIHIGXX 1056
IL P + +++S F L FP YF +K+ + + L +G C GLYP+
Sbjct: 327 ILYVPEANKSLISAHRLAFDNQAFLELFPRYFSIKDQVTRKLLHQGRCERGLYPL----- 381
Query: 1057 XXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLIT 1164
++ WH L H + I+ +++
Sbjct: 382 KSFPNKQVFAAIKLSPSQWHCRLGHPSSVIVQQVLS 417
Score = 22.3 bits (46), Expect(3) = 1e-08
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVGSS 887
Y G QV + SG+ I +G S
Sbjct: 291 YNGGDQVHTASGSGMKINQIGQS 313
>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 50.8 bits (120), Expect(3) = 1e-08
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +2
Query: 503 GHTVINCYNRMNEGRGSSPRGSSNLXXXXXXXXXXXXXXXXXXCQICDCLGHKAINCHDR 682
GH N +N GRG RG CQ+CD LGH + C+ R
Sbjct: 119 GHGQPNQGQNLNRGRGGQGRGRGGFTNNQGGDHPK--------CQLCDKLGHTVVKCYKR 170
Query: 683 MNMAYEGRVPTQKLLALAASSSFNNG-GTKGDTGASNHVIADLAK 814
+ ++ G ++ A AA+SS+ G DTGA++H+ +DL K
Sbjct: 171 FDASFTG----EEKSAAAATSSYGVGTNWYIDTGATDHITSDLDK 211
Score = 33.1 bits (74), Expect(3) = 1e-08
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +1
Query: 889 ILCCPNVSANILSLSICFF----VLFPFPNYFLVKNLSSARTLFKGPCCSGLYPIHIGXX 1056
IL P + +++S F L FP YF +K+ + + L +G C GLYP+
Sbjct: 254 ILYVPEANKSLISAHRLAFDNQAFLELFPRYFSIKDQVTRKLLHQGRCERGLYPL----- 308
Query: 1057 XXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLIT 1164
++ WH L H + I+ +++
Sbjct: 309 KSFPNKQVFAAIKLSPSQWHCRLGHPSSVIVQQVLS 344
Score = 22.3 bits (46), Expect(3) = 1e-08
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVGSS 887
Y G QV + SG+ I +G S
Sbjct: 218 YNGGDQVHTASGSGMKINQIGQS 240
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 43.5 bits (101), Expect(3) = 5e-08
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTKGDTGASNHVIA 802
CQIC +GH AI C++R + Y+ VPTQ AL S D+ A+ H+ A
Sbjct: 281 CQICGRIGHTAIKCYNRFDNNYQSEVPTQAFSALRVSDETGKEWYP-DSAATAHITA 336
Score = 30.4 bits (67), Expect(3) = 5e-08
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVGSS 887
Y+G V VG+ + LPITHVGS+
Sbjct: 347 YEGNDAVLVGDGTYLPITHVGST 369
Score = 30.4 bits (67), Expect(3) = 5e-08
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Frame = +1
Query: 889 ILCCPNVSANILSLS-ICFFVLFPFPNYF-----LVKNLSSARTLFKGPCCSGLYPIHIG 1050
+L CP + ++LS+S +C +P YF + +L++ + + KGP +GLY +
Sbjct: 383 VLVCPAIQKSLLSVSKLCDD--YPCGVYFDANKVCIIDLTTQKVVSKGPRNNGLYMLE-- 438
Query: 1051 XXXXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLITTR 1170
+ WH L H I+ L+T +
Sbjct: 439 -NSEFVALYSNRQCAASMETWHHRLGHSNSKILQQLLTRK 477
>emb|CAN69706.1| hypothetical protein VITISV_037595 [Vitis vinifera]
Length = 431
Score = 42.0 bits (97), Expect(3) = 1e-07
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = +1
Query: 892 LCCPNVSANILSLSIC-----FFVLFPFPNYFLVKNLSSARTLFKGPCCSGLYPIHIGXX 1056
LC PN+ N++S+ +V F P+YFLVK + L +G C + +Y
Sbjct: 235 LCVPNLKKNMISVHHFTSQNNVYVEF-HPSYFLVKEPITGAILLRGSCENDIYIFPESLV 293
Query: 1057 XXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLITT 1167
RT D WH L H + I+ +L++T
Sbjct: 294 GNFSQKVANVHERTSLDGWHKRLGHPSYPIVKNLVST 330
Score = 32.3 bits (72), Expect(3) = 1e-07
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 813 NDYKGTSQVAVGNDSGLPITHVGS 884
++Y GT +V +G+ SGL ++HVGS
Sbjct: 196 SEYDGTDEVVLGDGSGLAVSHVGS 219
Score = 28.9 bits (63), Expect(3) = 1e-07
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTKGDTGASNHVIADL 808
CQ CD LGH NC P++ A +S+ D+ AS+++I DL
Sbjct: 139 CQFCDELGHTTKNCPQLK--------PSEITANSATTSTMKEQKWLLDSAASHNIIGDL 189
>ref|XP_003635371.1| PREDICTED: uncharacterized protein LOC100853190 [Vitis vinifera]
Length = 251
Score = 52.0 bits (123), Expect(2) = 1e-07
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTK--GDTGASNHVIAD 805
CQIC L HKA++C MN AY+GR P +L A+ A+S+ D+GA+ H+ A+
Sbjct: 150 CQICGKLSHKALDCFHIMNYAYQGRHPPTQLAAMVANSNAEQEEETWFADSGANQHITAN 209
Query: 806 L 808
L
Sbjct: 210 L 210
Score = 32.0 bits (71), Expect(2) = 1e-07
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 810 QNDYKGTSQVAVGNDSGLPITHVGSSN 890
Q Y G VAVGN GL I H G +N
Sbjct: 216 QQPYTGQENVAVGNGQGLSIAHTGHTN 242
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 39.7 bits (91), Expect(3) = 3e-07
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +1
Query: 889 ILCCPNVSANILSLSICFFVLFPF----PNYFLVKNLSSARTLFKGPCCSGLYPIHIGXX 1056
+L P + N++S+ + F YFL+K+ ++ RT+ +GPC GLYP+
Sbjct: 381 VLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLPARSS 440
Query: 1057 XXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLIT 1164
VR WH L H + I+ +++
Sbjct: 441 LRQAFVATPSFVR-----WHGRLGHPSKPIVLRILS 471
Score = 35.4 bits (80), Expect(3) = 3e-07
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTKGDTGASNHVIADLA 811
CQ+C GH A +C R + +Y VP +KL A + + DTGA++H+ L
Sbjct: 281 CQVCHKRGHVASDCWHRYDDSY---VPDEKLGGAATYAYGIDTNWYVDTGATDHITGQLD 337
Query: 812 K 814
K
Sbjct: 338 K 338
Score = 26.6 bits (57), Expect(3) = 3e-07
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVG 881
YKGT Q+ + G+ I HVG
Sbjct: 345 YKGTDQIHTASGEGMSIKHVG 365
>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
Length = 515
Score = 35.4 bits (80), Expect(3) = 5e-07
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +1
Query: 889 ILCCPNVSANILSLS-ICF--FVLFPFP-NYFLVKNLSSARTLFKGPCCSGLYPIHIGXX 1056
+L P++S N++S+S C V F F +YF VK+ + + L KG GLY
Sbjct: 377 VLHVPHLSTNLISVSKFCMDNAVFFEFHFSYFFVKDQVTKKILLKGWLRDGLY--EFSSS 434
Query: 1057 XXXXXXXXXXXVRTGADAWHSCLAHCAPSIM 1149
GA WHSCL H A I+
Sbjct: 435 SPPRAFVTTSSFSDGA-IWHSCLGHPAAPIL 464
Score = 33.9 bits (76), Expect(3) = 5e-07
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGR--VPTQKLL---ALAASSSFNNGGTKGDTGASNHV 796
CQ+C GH I C+ R ++ Y+G VP + ++ A++ + DTGA++H+
Sbjct: 269 CQLCGKFGHTVIKCYHRFDINYQGNNSVPPAQASFSHSMLAAAPNHQDSWFFDTGATHHL 328
Score = 31.6 bits (70), Expect(3) = 5e-07
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 783 HPIMSLQI*QNDYKGTSQVAVGNDSGLPITHVGSSN 890
H + +L Q Y GT+QV +G+ + LPI H G+ +
Sbjct: 330 HSVQTLSCVQ-PYSGTNQVTIGDGNSLPILHTGTKS 364
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 39.7 bits (91), Expect(3) = 6e-07
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +1
Query: 889 ILCCPNVSANILSLSICFFVLFPF----PNYFLVKNLSSARTLFKGPCCSGLYPIHIGXX 1056
+L P + N++S+ + F YFL+K+ ++ RT+ +GPC GLYP+
Sbjct: 372 VLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLPARSS 431
Query: 1057 XXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLIT 1164
VR WH L H + I+ +++
Sbjct: 432 LRQAFVATPSFVR-----WHGRLGHPSKPIVLRILS 462
Score = 35.4 bits (80), Expect(3) = 6e-07
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTKGDTGASNHVIADLA 811
CQ+C GH A +C R + +Y VP +KL A + + DTGA++H+ L
Sbjct: 272 CQVCHKRGHVASDCWHRYDDSY---VPDEKLGGAATYAYGVDTNWYVDTGATDHITGQLD 328
Query: 812 K 814
K
Sbjct: 329 K 329
Score = 25.4 bits (54), Expect(3) = 6e-07
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVG 881
YKGT Q+ + G I HVG
Sbjct: 336 YKGTDQIHTASGEGTSIKHVG 356
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 46.2 bits (108), Expect(3) = 6e-07
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +1
Query: 889 ILCCPNVSANILSLS---ICFFVLFPF-PNYFLVKNLSSARTLFKGPCCSGLYPIHIGXX 1056
+LC P + N++S+S I V F P+ FLVK+L + TL KG G+Y +
Sbjct: 292 VLCVPGMKKNLISISKLXISNNVSITFLPSSFLVKDLRTGATLLKGKTKDGVYEWLVS-- 349
Query: 1057 XXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLITTRFL 1176
V+T + WH L H A I+ H+I+T L
Sbjct: 350 ---SPLLAFSSVKTSSSEWHHRLGHPAFPILKHVISTNNL 386
Score = 28.9 bits (63), Expect(3) = 6e-07
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVGS 884
Y G+ + + + +GLPITH GS
Sbjct: 256 YNGSDDIMIDDGTGLPITHTGS 277
Score = 25.4 bits (54), Expect(3) = 6e-07
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLL--------ALAASSSFNNGGTKGDTGAS 787
CQIC GH C + E T A A+++ N D+GAS
Sbjct: 181 CQICRNQGHTTKRCPSFRLIPIETSTNTSTATPNSSCQPKAHFAANTSNTPTWLLDSGAS 240
Query: 788 NHVIADLA 811
+H+ +DL+
Sbjct: 241 HHITSDLS 248
>emb|CAN78270.1| hypothetical protein VITISV_006712 [Vitis vinifera]
Length = 334
Score = 37.0 bits (84), Expect(3) = 7e-07
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +2
Query: 635 QICDCLGHKAINCHDRMNMAYEGRVPTQKLLAL---AASSSFNNGGTKGDTGASNHVIAD 805
QIC H+A++ ++RMN A++GR P +L A+ A ++ N ++G + HV +D
Sbjct: 135 QICKRENHQALDYYNRMNYAFQGRHPPTELAAMVVEANTTYLNQHQWYTNSGVNIHVPSD 194
Query: 806 LA 811
A
Sbjct: 195 TA 196
Score = 36.6 bits (83), Expect(3) = 7e-07
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = +1
Query: 898 CPNVSANILSLSICFF---VLFPFP-NYFLVKNLSSARTLFKGPCCSGLYPIHIG--XXX 1059
CP SA++LS++ + VLF + F VK+L + TL GP GLY I++
Sbjct: 243 CPQASAHLLSINKFYKDNNVLFELTGSNFFVKDLKTGDTLMTGPSDRGLYSINLQQLSSS 302
Query: 1060 XXXXXXXXXXVRTGADAWHSCLAHCAPSIMYH 1155
V+ WH L H + S +++
Sbjct: 303 KFHAFSMTIGVKASIATWHCRLGHPSSSTLHN 334
Score = 26.9 bits (58), Expect(3) = 7e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVGSS 887
Y+GT V VGN +GL I+ G++
Sbjct: 204 YEGTDTVGVGNGAGLIISRTGNA 226
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 41.2 bits (95), Expect(3) = 1e-06
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +1
Query: 889 ILCCPNVSANILSLSICFFVLFPF----PNYFLVKNLSSARTLFKGPCCSGLYPIHIGXX 1056
IL P S N++S+ + F YFL+K+ + RT+ +GPC LYP+ G
Sbjct: 373 ILHVPKASKNLISVHRLVADNYAFLEIHQKYFLIKDKVTRRTILEGPCRRDLYPLPAG-- 430
Query: 1057 XXXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLI 1161
V + WH L H + I+ +I
Sbjct: 431 ---DPIKQVFAVMPSFERWHGRLGHASKPIVLRVI 462
Score = 30.8 bits (68), Expect(3) = 1e-06
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTKGDTGASNHVIADLA 811
CQ+C GH +C R + E VP +KL A + + DT A++H+ L
Sbjct: 273 CQVCHKKGHVVADCWHRYD---ENYVPDEKLGGAATHAYGVDTNWYVDTEATDHITGQLD 329
Query: 812 K 814
K
Sbjct: 330 K 330
Score = 27.3 bits (59), Expect(3) = 1e-06
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVGSS 887
YKGT Q+ + G+ I H+G S
Sbjct: 337 YKGTDQIHTASGEGMDIQHIGHS 359
>emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]
Length = 1429
Score = 44.7 bits (104), Expect(2) = 2e-06
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +1
Query: 892 LCCPNVSANILSLSICF----FVLFPFPNYFLVKNLSSARTLFKGPCCSGLYPIHIGXXX 1059
LC P ++ N++S+ +L P YFL K+ + L +GPC +G+YP+
Sbjct: 249 LCVPTINKNLISVHHYTKQNNVILEFHPTYFLAKDWRTGEILLQGPCENGVYPL---ASS 305
Query: 1060 XXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLITT 1167
RT A WH L H + ++ LI++
Sbjct: 306 PAATPIAFVHERTSAXGWHXRLGHRSFKVVXRLISS 341
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 813 NDYKGTSQVAVGNDSGLPITHVGS 884
++Y GT +V +G+ SGLPITH GS
Sbjct: 210 SEYDGTDEVIIGDGSGLPITHSGS 233
>ref|XP_004300970.1| PREDICTED: uncharacterized protein LOC101292509 [Fragaria vesca
subsp. vesca]
Length = 499
Score = 60.1 bits (144), Expect = 2e-06
Identities = 38/133 (28%), Positives = 52/133 (39%)
Frame = +2
Query: 476 PRCQICDRLGHTVINCYNRMNEGRGSSPRGSSNLXXXXXXXXXXXXXXXXXXCQICDCLG 655
P CQIC + GHT NC+ R + P G +L CQIC G
Sbjct: 324 PECQICSKKGHTATNCFYRTDV-----PDGHPSLSIPT--------------CQICGLKG 364
Query: 656 HKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTKGDTGASNHVIADLAK*L*GHQP 835
H A+NC N AY+G P L+AL+A+ + + G + I+
Sbjct: 365 HVALNCTHITNFAYQGSDPPTSLIALSATQTIGSANNVGQHSQGGYSISH---------- 414
Query: 836 SGCGQRFRSAYNP 874
G F +NP
Sbjct: 415 GSFGSSFPGGFNP 427
>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
Length = 590
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +1
Query: 892 LCCPNVSANILSLSICF----FVLFPFPNYFLVKNLSSARTLFKGPCCSGLYPIHIGXXX 1059
LC P ++ N++S+ +L P YFLVK+ + L +GPC +G+YP+
Sbjct: 357 LCVPTINKNLISVHHFTKQNNVILEFHPTYFLVKDRRTGEILLQGPCENGVYPM---PSS 413
Query: 1060 XXXXXXXXXXVRTGADAWHSCLAHCAPSIMYHLITT 1167
RT WH L H + ++ LI++
Sbjct: 414 PAATPIAFVHERTSVTGWHQRLGHPSFKVVTRLISS 449
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 813 NDYKGTSQVAVGNDSGLPITHVGS 884
++Y GT +V +G+ SGLPITH GS
Sbjct: 318 SEYDGTDEVIIGDGSGLPITHSGS 341
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 36.6 bits (83), Expect(3) = 2e-06
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +1
Query: 889 ILCCPNVSANILSLSICFFVLFPF----PNYFLVKNLSSARTLFKGPCCSGLYPI 1041
+L P + N++S+ + F YFL+K+ ++ RT+ +GPC GLYP+
Sbjct: 381 VLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPL 435
Score = 35.4 bits (80), Expect(3) = 2e-06
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 632 CQICDCLGHKAINCHDRMNMAYEGRVPTQKLLALAASSSFNNGGTKGDTGASNHVIADLA 811
CQ+C GH A +C R + +Y VP +KL A + + DTGA++H+ L
Sbjct: 281 CQVCHKRGHVASDCWHRYDDSY---VPDEKLGGAATYAYGVDTNWYVDTGATDHITGQLD 337
Query: 812 K 814
K
Sbjct: 338 K 338
Score = 26.6 bits (57), Expect(3) = 2e-06
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 819 YKGTSQVAVGNDSGLPITHVG 881
YKGT Q+ + G+ I HVG
Sbjct: 345 YKGTDQIHTASGEGMSIKHVG 365