BLASTX nr result
ID: Paeonia22_contig00003790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00003790
(473 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 110 3e-22
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 110 3e-22
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 109 4e-22
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 108 8e-22
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 108 8e-22
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 106 4e-21
gb|AFK40562.1| unknown [Lotus japonicus] 105 6e-21
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 105 8e-21
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 102 5e-20
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas... 100 2e-19
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 99 8e-19
ref|XP_004491901.1| PREDICTED: DNA-directed RNA polymerase III s... 99 8e-19
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 99 8e-19
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 97 2e-18
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 97 3e-18
ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6... 97 3e-18
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 96 4e-18
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 96 5e-18
ref|XP_006450803.1| hypothetical protein CICLE_v100094941mg, par... 96 5e-18
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 95 1e-17
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 110 bits (274), Expect = 3e-22
Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MSR+Q + L KRKRPDT+ + E++LYD+IRSKE GIW+ + ET +P+
Sbjct: 62 MSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N+++K +K Y+A FEPS ELTGG WY +G LDTE+I LK+T
Sbjct: 121 KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 179
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C+ + K K AT +GI E + + + +TQ+ I EI+ +L
Sbjct: 180 CVRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRAL 221
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 110 bits (274), Expect = 3e-22
Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MSR+Q + L KRKRPDT+ + E++LYD+IRSKE GIW+ + ET +P+
Sbjct: 1 MSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N+++K +K Y+A FEPS ELTGG WY +G LDTE+I LK+T
Sbjct: 60 KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 118
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C+ + K K AT +GI E + + + +TQ+ I EI+ +L
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRAL 160
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 109 bits (272), Expect = 4e-22
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MSR+Q + L KRKRPDT+ + E++LYD+IRSKE GIW+ + ET +P+
Sbjct: 1 MSRSQGSSL-KRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N+++K +K Y+A FEPS ELTGG WY +G LDTE+I LK T
Sbjct: 60 KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C+ + K K AT +GI E + + + +TQ+ I EI+ +L
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRAL 160
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 108 bits (270), Expect = 8e-22
Identities = 67/163 (41%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MSR+Q L KRKRPDT+ + E++LYD+IRSKE GIW+ + ET +P+
Sbjct: 91 MSRSQGLSL-KRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 149
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N+++K +K Y+A FEPS ELTGG WY +G LDTE+I LK T
Sbjct: 150 KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 208
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C+ + K K AT +GI E + + + +TQ+ I EI+ +L
Sbjct: 209 CVKVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRAL 250
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 108 bits (270), Expect = 8e-22
Identities = 67/163 (41%), Positives = 95/163 (58%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHEQE-----EKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MSR+Q L KRKRPDT+ + E++LYD+IRSKE GIW+ + ET +P+
Sbjct: 1 MSRSQGLSL-KRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N+++K +K Y+A FEPS ELTGG WY +G LDTE+I LK T
Sbjct: 60 KSLKALQVKKLIK-EVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C+ + K K AT +GI E + + + +TQ+ I EI+ +L
Sbjct: 119 CVKVLSKLKVATAEGISESINKTGLCATECSTQQ-IAEILRAL 160
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 106 bits (264), Expect = 4e-21
Identities = 63/163 (38%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MSR Q KRKRP+ + + E+ILYDVIRSK+ GIW+ + E K+P+
Sbjct: 53 MSRVQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 112
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N++NK +K ++AT FEPS E++GG WY +G LDTEFI++L++
Sbjct: 113 KSLKALRVKNLIK-EVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQL 171
Query: 348 CLMGIKDK-AATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C I+ K ATL+ + + + AF+ T Q+ I EI+ +L
Sbjct: 172 CKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQ-IEEILRTL 213
>gb|AFK40562.1| unknown [Lotus japonicus]
Length = 232
Score = 105 bits (262), Expect = 6e-21
Identities = 65/159 (40%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPD-TDHEQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXXXXXX 179
MSR + KRKRPD TD E ++Y +I SKE GIW A + ETK+P+
Sbjct: 1 MSRLPGSSSLKRKRPDLTDGED---VVYKLIHSKENMGIWIADIKRETKMPDNMVKKCIK 57
Query: 180 XXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMG 359
E+ N++++ +K Y+A FEPS ELTGGDWY DGK DT+FI+A K L
Sbjct: 58 SLQDKNLVK-EVVNIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAKDVFLKY 116
Query: 360 I-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
+ K K AT G+ E R+ F T Q+ + EI+ +L
Sbjct: 117 VFKQKVATCDGVLEWTRKNAVFSVDVTAQQ-VEEILRAL 154
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 105 bits (261), Expect = 8e-21
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MSR Q KRKRP+ + + E++LYDVIRSK+ GIW+ + E K+P+
Sbjct: 1 MSRLQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N++NK +K ++AT FEPS E++GG WY +G LDTEFI++LK+
Sbjct: 61 KSLKALQVKKLIK-EVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQL 119
Query: 348 CLMGIKDK-AATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C I+ + ATL+ + + + AF+ T Q+ I EI+ +L
Sbjct: 120 CKRQIERRGVATLEEVTDSINSYPAFNVDVTKQQ-IEEILRTL 161
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 102 bits (254), Expect = 5e-20
Identities = 63/163 (38%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
M+R+Q+ KRK+P++ + E LY+VI SK+ GIW+ + ET +P+
Sbjct: 1 MNRSQAL---KRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVN 57
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N++NK +K Y+AT FEPS E+TGG WY +G LDTEFI LK
Sbjct: 58 KSLKVLQAKNLIK-EVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEV 116
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C + K K ATL+GI + ++R F+ + T Q+ I EI+ +L
Sbjct: 117 CTKQVLKLKVATLEGITDSIKRSGIFNTELTKQQ-IEEIVKAL 158
>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
gi|561012478|gb|ESW11339.1| hypothetical protein
PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 100 bits (249), Expect = 2e-19
Identities = 61/163 (37%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDT-----DHEQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MS+ Q + KRKR D E++LY++I SK+ GIW+ + ET +P+
Sbjct: 1 MSQLQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N++NK +K Y+A FEPS E+TGGDWY G LDT+FI+ +K
Sbjct: 61 KSLKLLQSKNLIK-EVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEV 119
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
CL I + K AT G+ E R+ F + T Q+ I EI+ +L
Sbjct: 120 CLKCIFRQKVATHDGVLEWSRKSGVFTVEVTAQQ-IDEILRAL 161
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 98.6 bits (244), Expect = 8e-19
Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 10/159 (6%)
Frame = +3
Query: 27 LNKRKRPD--------TDHEQEEKILYDVIRSKEGSGIWSASLVHETKIP-NXXXXXXXX 179
++KRKRPD TDHE +++YDVIRSK+ GIW+ + E ++
Sbjct: 1 MSKRKRPDSNAPSDSLTDHE---RLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSI 57
Query: 180 XXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMG 359
E+ N+ +K +K +A FEPS E++GG WY++G LDTEFI +K CL
Sbjct: 58 KSLQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQ 117
Query: 360 -IKDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
IK K ATL+GI + ++R AF T Q+ I EI+ +L
Sbjct: 118 IIKLKVATLEGISDSIKRSGAFKVDLTKQQ-IEEIVRAL 155
>ref|XP_004491901.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Cicer arietinum]
gi|502101892|ref|XP_004491902.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC6-like isoform X2 [Cicer
arietinum]
Length = 235
Score = 98.6 bits (244), Expect = 8e-19
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Frame = +3
Query: 15 QSTLLNKRKRPDTDHEQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXXXXXXXXXXX 194
+S+ KR++ EE ILY++I SK+ GIW+ + ET +P
Sbjct: 6 ESSPQRKRQKVSPSLTNEESILYNLIYSKKDIGIWTGDMKRETNLP-VTVFNKTLKELMS 64
Query: 195 XXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMGI-KDK 371
E++ ++NK +K Y+A FEPS E+TGG+WY DGKLDT+FI ALK C I K K
Sbjct: 65 KSMIKEVTTIQNKGRKHYMAIEFEPSKEITGGNWYTDGKLDTDFIAALKDVCFKYISKQK 124
Query: 372 AATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
+TL G E ++ F+ + T ++ +IM +L
Sbjct: 125 VSTLDGFLEWSKKNGIFNSE-VTPTQVEDIMKTL 157
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max]
Length = 239
Score = 98.6 bits (244), Expect = 8e-19
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDT-----DHEQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MS Q + KRKR D E++LY++I SK+ GIW+ + ET +P+
Sbjct: 1 MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N++NK +K Y+A FEPS E+TGG WY G+LDT+FI+ +K
Sbjct: 61 KSLKLLQSKNLIK-EVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDV 119
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
CL I + K AT G+ E R+ F+ + TTQ+ I EI+ +L
Sbjct: 120 CLKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQ-IDEILRTL 161
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 97.1 bits (240), Expect = 2e-18
Identities = 61/159 (38%), Positives = 89/159 (55%), Gaps = 10/159 (6%)
Frame = +3
Query: 27 LNKRKRPD--------TDHEQEEKILYDVIRSKEGSGIWSASLVHETKIP-NXXXXXXXX 179
++KRKRP+ TDHE +++YDVIRSK+ GIW+ + E ++
Sbjct: 1 MSKRKRPESNAPSDSLTDHE---RLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSI 57
Query: 180 XXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMG 359
E+ N+ +K +K +A FEPS E++GG WY++G LDTEFI +K CL
Sbjct: 58 KSLQNKSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQ 117
Query: 360 -IKDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
IK K ATL+GI + ++R AF T Q+ I EI+ +L
Sbjct: 118 IIKLKVATLEGISDSIKRSGAFKVDLTKQQ-IEEIVRAL 155
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 96.7 bits (239), Expect = 3e-18
Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 11/162 (6%)
Frame = +3
Query: 12 AQSTLLNKRKRPD--------TDHEQEEKILYDVIRS-KEGSGIWSASLVHETKIP-NXX 161
A+ + ++KRKRPD TDHE +++YDVIRS K+ GIW+ + E K+
Sbjct: 14 AKGSGMSKRKRPDSNAPSDSLTDHE---RLIYDVIRSNKQDMGIWTRDMKRELKVNLPDN 70
Query: 162 XXXXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALK 341
E+ N+ NK +K +A FEPS E++GG WY++G LDTEFI +K
Sbjct: 71 IVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVK 130
Query: 342 RTCLMG-IKDKAATLKGIFEHVRRLKAFDEKFTTQERIREIM 464
CL IK K ATL+GI + ++R AF T Q+ I EI+
Sbjct: 131 SQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQ-IEEIV 171
>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
III subunit RPC6 [Medicago truncatula]
Length = 456
Score = 96.7 bits (239), Expect = 3e-18
Identities = 62/159 (38%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDH-EQEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXXXXXX 179
M R Q + +++KR EE+ILYD+I SKE SGI + ET +P
Sbjct: 3 MKRLQESGSSQQKRQKLSALPTEERILYDLILSKENSGISKTDMRRETNLP-IAALNKHM 61
Query: 180 XXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMG 359
E+ ++KNK K Y+ T FEPS ++TGG +Y++G LDT FIDALK+TCL
Sbjct: 62 KALMNKSMVKELPSIKNKGIKIYMGTEFEPSKDITGGHFYSEGSLDTVFIDALKQTCLQC 121
Query: 360 IK-DKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
I ++ +T G E V+R F + T E+I EI+ +L
Sbjct: 122 ISLERVSTCDGCLEWVKRSGVFTTQ-VTGEQIEEILQTL 159
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform 1 [Solanum lycopersicum]
gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like isoform 2 [Solanum
lycopersicum]
Length = 237
Score = 96.3 bits (238), Expect = 4e-18
Identities = 55/161 (34%), Positives = 91/161 (56%), Gaps = 4/161 (2%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHE---QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXXXX 173
MSR+ KRKRPD+ + E ++ +V++SK+ G+W A + E I
Sbjct: 1 MSRSSEAAALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIA-PALVDK 59
Query: 174 XXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 353
++ +++NK +K Y+A +EPS+ELTGG WY++GKLD EFI L+ TCL
Sbjct: 60 CLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 354 MGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
I K AT++GI + +++ K + T +++ EI++S+
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVE--CCTSQQVGEILNSM 158
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 95.9 bits (237), Expect = 5e-18
Identities = 63/157 (40%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Frame = +3
Query: 27 LNKRKRPD--------TDHEQEEKILYDVIRS-KEGSGIWSASLVHETKIP-NXXXXXXX 176
++KRKRPD TDHE +++YDVIRS K+ GIW+ + E K+
Sbjct: 1 MSKRKRPDSNAPSDSLTDHE---RLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKS 57
Query: 177 XXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLM 356
E+ N+ NK +K +A FEPS E++GG WY++G LDTEFI +K CL
Sbjct: 58 IKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLK 117
Query: 357 G-IKDKAATLKGIFEHVRRLKAFDEKFTTQERIREIM 464
IK K ATL+GI + ++R AF T Q+ I EI+
Sbjct: 118 QIIKLKVATLEGISDSIKRSGAFKVDLTKQQ-IEEIV 153
>ref|XP_006450803.1| hypothetical protein CICLE_v100094941mg, partial [Citrus
clementina] gi|557554029|gb|ESR64043.1| hypothetical
protein CICLE_v100094941mg, partial [Citrus clementina]
Length = 153
Score = 95.9 bits (237), Expect = 5e-18
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 10/143 (6%)
Frame = +3
Query: 12 AQSTLLNKRKRPD--------TDHEQEEKILYDVIRSKEGSGIWSASLVHETKIP-NXXX 164
A+ + ++KRKRPD TDHE +++YDVIRSK+ GIW+ + E K+
Sbjct: 14 AEGSGMSKRKRPDSNAPSDSLTDHE---RLIYDVIRSKQDMGIWTRDMKRELKVNLPDNI 70
Query: 165 XXXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKR 344
E+ N+ NK +K +A FEPS E++GG WY++G LDTEFI +K
Sbjct: 71 VTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKS 130
Query: 345 TCLMG-IKDKAATLKGIFEHVRR 410
CL IK K ATL+GI + ++R
Sbjct: 131 QCLKQIIKLKVATLEGISDSIKR 153
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 94.7 bits (234), Expect = 1e-17
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Frame = +3
Query: 3 MSRAQSTLLNKRKRPDTDHE-----QEEKILYDVIRSKEGSGIWSASLVHETKIPNXXXX 167
MSR Q KRK+P+++ + E+ LY+ IRSK+ GIW+ + ET +P+
Sbjct: 1 MSRFQG---QKRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVN 57
Query: 168 XXXXXXXXXXXXXXEISNMKNKTQKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRT 347
E+ N++NK +K Y+AT FEPS E+TGG WY +G LDT FI LK
Sbjct: 58 KSLKVLQAKNLIK-EVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQ 116
Query: 348 CLMGI-KDKAATLKGIFEHVRRLKAFDEKFTTQERIREIMDSL 473
C I K K AT++ + + + R T+++I EI+ +L
Sbjct: 117 CKKQIEKLKVATVEAVTDFINR-TGVSTVHLTKQQIEEILKAL 158