BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00003583
         (1614 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37506.3| unnamed protein product [Vitis vinifera]              652   0.0  
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   647   0.0  
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   622   e-175
ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcr...   619   e-175
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   619   e-175
gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]     593   e-167
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   572   e-160
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   572   e-160
ref|XP_007046443.1| Major facilitator superfamily protein isofor...   566   e-158
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   545   e-152
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   539   e-150
ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcr...   531   e-148
ref|XP_002524432.1| transcription initiation factor ia, putative...   530   e-148
ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcr...   530   e-147
ref|XP_007134114.1| hypothetical protein PHAVU_010G020100g [Phas...   530   e-147
ref|XP_004508346.1| PREDICTED: RNA polymerase I-specific transcr...   518   e-144
ref|XP_002307198.2| RNA polymerase 1 specific transcription init...   505   e-140
ref|XP_007204094.1| hypothetical protein PRUPE_ppa002914mg [Prun...   503   e-139
ref|XP_002881355.1| RNA polymerase I specific transcription init...   486   e-135
ref|NP_850236.1| RNA polymerase I specific transcription initiat...   484   e-134

>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  652 bits (1683), Expect = 0.0
 Identities = 350/517 (67%), Positives = 417/517 (80%), Gaps = 7/517 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALISDPR-ESDSYGQLVEVLHRKVNLTP 259
            MGVELATD+AG+ EM E+VN SD ELV+ VR AL S P  +SDSY QL+ VLH K  L P
Sbjct: 1    MGVELATDRAGFHEM-EEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+VAL+VT+LKALSGAVSCID+  H+SLLS+IFGMS+W+YGPDV DAL ELI+SLA+SSG
Sbjct: 60   DEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
             +L   L+MLV +F+PP ++ D LKQ RGLARKD+VLS+VHS LKDI+DLVPLAP +L P
Sbjct: 120  NYLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVP 179

Query: 620  IVLGRMPKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSH 799
            IV+ RMP +  KEPL  IM+YVE+MLRLE GAI ELVG+ ML  L+ RL++LDVEI W  
Sbjct: 180  IVIQRMPNVFTKEPL--IMIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLDVEIAWEE 237

Query: 800  ILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFE 964
            +L+DD SKGIF+MELED+EE ADD ENDGGE    S SR      ++AEKLDSLMVLTFE
Sbjct: 238  VLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDSLMVLTFE 297

Query: 965  HLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLED 1144
            HL+SC  GGRL++VF+ LV SF+ TVLNA+KSKFAQFVMFYAC+LDPE CGV FA +L D
Sbjct: 298  HLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLAD 357

Query: 1145 IFF-SNDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPK 1321
             F  S  PP  RMSAVAYLASYLSRGKFL+ S V + L+RLV WCL YC+    GDINPK
Sbjct: 358  FFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIH-DGDINPK 416

Query: 1322 SHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEF 1501
            +H VFYSGCQAIMYVLCFRMRS+++VP L+S+LLL+P++ ILKHPL+PLKVC P IV+EF
Sbjct: 417  AHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEF 476

Query: 1502 LQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            L+QAKAA LFT S   ETFIF++  L+ SELSRAFGG
Sbjct: 477  LRQAKAARLFTVS---ETFIFSD--LLESELSRAFGG 508


>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  647 bits (1670), Expect = 0.0
 Identities = 349/524 (66%), Positives = 416/524 (79%), Gaps = 14/524 (2%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALISDPR-ESDSYGQLVEVLHRKVNLTP 259
            MGVELATD+AG+ EM E+VN SD ELV+ VR AL S P  +SDSY QL+ VLH K  L P
Sbjct: 1    MGVELATDRAGFHEM-EEVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+VAL+VT+LKALSGAVSCID+  H+SLLS+IFGMS+W+YGPDV DAL ELI+SLA+SSG
Sbjct: 60   DEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
             +L   L+MLV +F+PP ++ D LKQ RGLARKD+VLS+VHS LKDI+DLVPLAP +L P
Sbjct: 120  NYLDCSLDMLVSNFMPPYSLLDFLKQPRGLARKDQVLSRVHSTLKDIADLVPLAPSRLVP 179

Query: 620  IVLGRMPKMSQKEP-------LIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELD 778
            IV+ RMP +  KEP       L  I +YVE+MLRLE GAI ELVG+ ML  L+ RL++LD
Sbjct: 180  IVIQRMPNVFTKEPVSSICSTLFRIQIYVENMLRLEGGAIRELVGNMMLVALMDRLVDLD 239

Query: 779  VEIKWSHILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDS 943
            VEI W  +L+DD SKGIF+MELED+EE ADD ENDGGE    S SR      ++AEKLDS
Sbjct: 240  VEIAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSLGGNLIAEKLDS 299

Query: 944  LMVLTFEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVT 1123
            LMVLTFEHL+SC  GGRL++VF+ LV SF+ TVLNA+KSKFAQFVMFYAC+LDPE CGV 
Sbjct: 300  LMVLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYACALDPENCGVR 359

Query: 1124 FAVMLEDIFF-SNDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQG 1300
            FA +L D F  S  PP  RMSAVAYLASYLSRGKFL+ S V + L+RLV WCL YC+   
Sbjct: 360  FARVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLVVWCLEYCKIH- 418

Query: 1301 GGDINPKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCF 1480
             GDINPK+H VFYSGCQAIMYVLCFRMRS+++VP L+S+LLL+P++ ILKHPL+PLKVC 
Sbjct: 419  DGDINPKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCL 478

Query: 1481 PCIVDEFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            P IV+EFL+QAKAA LFT S   ETFIF++  L+ SELSRAFGG
Sbjct: 479  PSIVEEFLRQAKAARLFTVS---ETFIFSD--LLESELSRAFGG 517


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  622 bits (1605), Expect = e-175
 Identities = 338/518 (65%), Positives = 402/518 (77%), Gaps = 8/518 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTP 259
            MGVEL  D A   EM EDVN+SDLELV+ VR+AL S    ++D+Y QLV V+H    L P
Sbjct: 1    MGVELPIDHAESHEM-EDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+ AL+ T+LKALSGAVS IDI  HESLL +IFGMSMW+Y PDV DAL  LI+SLA+S+G
Sbjct: 60   DNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDVMDALKGLIISLAASNG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
            K++ SCL MLV +F PP    D LK+  GL RK +VLS+VH+ALK I DLVPLAP +L P
Sbjct: 120  KYVDSCLTMLVSNFTPPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPTRLLP 179

Query: 620  IVLGRMPKMSQK-EPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWS 796
            IV+ RMP +  K E L +I+VY E+ML+LES A+GELV S +L  +V RLI+LD+EI W 
Sbjct: 180  IVVQRMPTVHNKHERLKMIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWD 239

Query: 797  HILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTF 961
             IL DD SKGIF+MELEDVEE ADDAE  G E P  S SR      ++AE LDSLMVLTF
Sbjct: 240  DILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSLSRKSLSGNLIAELLDSLMVLTF 299

Query: 962  EHLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLE 1141
            EHL+SC   GRL++VF+IL++SF+ITVLNAYKSKFAQFVMFYAC+LDPE CG+ FA ML 
Sbjct: 300  EHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLA 359

Query: 1142 DIFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINP 1318
            D+F S   PP TRMSAV+YLAS+LSR +FLSP  +VS LKRLVDWCL YC    GGDINP
Sbjct: 360  DVFVSGLYPPLTRMSAVSYLASFLSRARFLSPCFIVSLLKRLVDWCLEYCNIL-GGDINP 418

Query: 1319 KSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDE 1498
            K+H VFYSGCQAIMYVLCFRMRS++D+PRLKS+LLLMP++ +LKH LNPLKVC P +V E
Sbjct: 419  KAHRVFYSGCQAIMYVLCFRMRSIMDIPRLKSQLLLMPLETVLKHDLNPLKVCLPSVVSE 478

Query: 1499 FLQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            FLQQ+KAA LFT S   ETF+FN+  L+ SELSRAFGG
Sbjct: 479  FLQQSKAARLFTVS---ETFVFND--LLESELSRAFGG 511


>ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X3 [Citrus sinensis]
          Length = 534

 Score =  619 bits (1597), Expect = e-175
 Identities = 337/518 (65%), Positives = 402/518 (77%), Gaps = 8/518 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTP 259
            MG+EL  D A   EM EDVN+SDLELV+ VR+AL S    ++D+Y QLV V+H    L P
Sbjct: 1    MGMELPKDHAESHEM-EDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+ AL+ T+LKALSGAVS IDI  HESLL +IFGMSMW+Y PD+ DAL  LI+SLA+SSG
Sbjct: 60   DNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
            K++ SCL MLVG+F PP    D LK+  GL RK +VLS+VH+ALK I DLVPLAP +L P
Sbjct: 120  KYVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLP 179

Query: 620  IVLGRMPKMSQK-EPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWS 796
            IV+ RMP +  K E L +I+VY E+ML+LES A+GELV S +L  +V RLI+LD+EI W 
Sbjct: 180  IVVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWD 239

Query: 797  HILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTF 961
             IL DD SKGIF+MELEDVEE ADDAE  G E P  S SR      ++AE LDSL+VLTF
Sbjct: 240  DILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTF 299

Query: 962  EHLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLE 1141
            EHL+SC   GRL++VF+IL++SF+ITVLNAYKSKFAQFVMFYAC+LDPE CG+ FA ML 
Sbjct: 300  EHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLA 359

Query: 1142 DIFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINP 1318
            D+F S   PP TRMS+V+YLASYLSR +FLSP  +VS LKRLVDWCL YC    GG+INP
Sbjct: 360  DVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEYCNIP-GGNINP 418

Query: 1319 KSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDE 1498
            K+H VFYSGCQAIMYVLCFRMRS++DVPRLKS+LLLMP++ +LKH LNPLKVC P +V E
Sbjct: 419  KAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSE 478

Query: 1499 FLQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            FLQQ+KAA LFT S   ETFIFN+  L+ SELSR FGG
Sbjct: 479  FLQQSKAARLFTVS---ETFIFND--LLESELSRDFGG 511


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  619 bits (1597), Expect = e-175
 Identities = 337/518 (65%), Positives = 402/518 (77%), Gaps = 8/518 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTP 259
            MG+EL  D A   EM EDVN+SDLELV+ VR+AL S    ++D+Y QLV V+H    L P
Sbjct: 1    MGMELPKDHAESHEM-EDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+ AL+ T+LKALSGAVS IDI  HESLL +IFGMSMW+Y PD+ DAL  LI+SLA+SSG
Sbjct: 60   DNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
            K++ SCL MLVG+F PP    D LK+  GL RK +VLS+VH+ALK I DLVPLAP +L P
Sbjct: 120  KYVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLP 179

Query: 620  IVLGRMPKMSQK-EPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWS 796
            IV+ RMP +  K E L +I+VY E+ML+LES A+GELV S +L  +V RLI+LD+EI W 
Sbjct: 180  IVVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWD 239

Query: 797  HILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTF 961
             IL DD SKGIF+MELEDVEE ADDAE  G E P  S SR      ++AE LDSL+VLTF
Sbjct: 240  DILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTF 299

Query: 962  EHLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLE 1141
            EHL+SC   GRL++VF+IL++SF+ITVLNAYKSKFAQFVMFYAC+LDPE CG+ FA ML 
Sbjct: 300  EHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLA 359

Query: 1142 DIFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINP 1318
            D+F S   PP TRMS+V+YLASYLSR +FLSP  +VS LKRLVDWCL YC    GG+INP
Sbjct: 360  DVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEYCNIP-GGNINP 418

Query: 1319 KSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDE 1498
            K+H VFYSGCQAIMYVLCFRMRS++DVPRLKS+LLLMP++ +LKH LNPLKVC P +V E
Sbjct: 419  KAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSE 478

Query: 1499 FLQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            FLQQ+KAA LFT S   ETFIFN+  L+ SELSR FGG
Sbjct: 479  FLQQSKAARLFTVS---ETFIFND--LLESELSRDFGG 511


>gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
          Length = 616

 Score =  593 bits (1528), Expect = e-167
 Identities = 321/516 (62%), Positives = 395/516 (76%), Gaps = 6/516 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTP 259
            MGVEL   +AG+ E+ +D + +D +LV+ VRDAL S    +SD Y +LV V+H +  L P
Sbjct: 1    MGVELRNGEAGFHEL-DDADFTDYDLVYHVRDALTSVSMGDSDKYNELVAVMHHRGPLAP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+VAL+VT+LKALSGAVS ID   HESLLS+IF M+MW+Y PDV DAL ELI+SLA+S+G
Sbjct: 60   DEVALLVTSLKALSGAVSYIDSVLHESLLSSIFSMNMWNYRPDVMDALLELIISLAASNG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
             ++ SCL+MLVG+F PP    D+LKQ RG+ARKD+VLS+VHS+LK ++DLVPL+P +L P
Sbjct: 120  TYIDSCLDMLVGNFTPPNYFTDMLKQPRGIARKDQVLSRVHSSLKVLADLVPLSPMRLLP 179

Query: 620  IVLGRMPKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSH 799
            I++ R P    KE  I++++YVE+ML+LESG  GELVGS ML  LV  L++LDVEI W  
Sbjct: 180  IIIQRKPHYCSKE--IILVIYVENMLKLESGIFGELVGSAMLSGLVDLLLDLDVEIGWDD 237

Query: 800  ILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSRTVV----AEKLDSLMVLTFEH 967
            IL+D+S+KGIF MELEDV+E  DD   DGGE P E S +++V    A KLDSLMVL FEH
Sbjct: 238  ILQDESAKGIFSMELEDVDEDIDDELMDGGELPRELSRKSLVGNLFARKLDSLMVLIFEH 297

Query: 968  LKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDI 1147
            L+SC VG RLV+VF+ L++ F+ TVL AYKSKF+QFVMFYAC+LDPE CGV FA ML D 
Sbjct: 298  LESCEVGRRLVEVFETLLQPFQKTVLTAYKSKFSQFVMFYACALDPENCGVRFANMLGDT 357

Query: 1148 FFSND-PPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKS 1324
            F SN  PP  RMSAVAYLASYLSRGKFLS SL+  +LKRLVDWCL YC  Q  G+INPK+
Sbjct: 358  FISNSHPPLLRMSAVAYLASYLSRGKFLSTSLIADTLKRLVDWCLDYCTIQ-EGEINPKA 416

Query: 1325 HSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFL 1504
            H +FYSGCQAIMY LCFRMRS++ VP  KS+ LLMPI LIL H L+PLKVC P IV EFL
Sbjct: 417  HRIFYSGCQAIMYALCFRMRSIMGVPWFKSQ-LLMPINLILSHKLSPLKVCLPSIVTEFL 475

Query: 1505 QQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            +Q+KAAGLF  S   E F F+++L   SELS+ FGG
Sbjct: 476  RQSKAAGLFITS---ERFNFDDYL--ESELSKGFGG 506


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  572 bits (1473), Expect = e-160
 Identities = 314/516 (60%), Positives = 386/516 (74%), Gaps = 6/516 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTP 259
            MG EL  ++A     MEDVN++D +LV  +R  L S    + D Y QLV V+H +  L+P
Sbjct: 1    MGAELENNQA-QLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+VAL+VT LKALSGAVSCIDI  HESLL+AIF MS+W YG +V DAL ELI+SLA S+G
Sbjct: 60   DEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
            K++ SCL+MLV +F+PP +  DLLK+  GL RK+ VLS+VH+ALKDISDLVPLAP +L  
Sbjct: 120  KYVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQ 179

Query: 620  IVLGRMPKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSH 799
             V+ +M ++   E L  I  YVE+MLRLE GA+ E VG ++L  LV +L++LDVEI W  
Sbjct: 180  KVVHKMQRVFFNESLTTI--YVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDD 237

Query: 800  ILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSRT----VVAEKLDSLMVLTFEH 967
            IL+DD SKGIF+MELED ++T DD   D  E P E S R+    V+AE LDSL+VLTFEH
Sbjct: 238  ILQDDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEH 297

Query: 968  LKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDI 1147
            L+SC   GRL +VFDIL+ SF+ TVL AYKSKFAQF++FYACSLDPE CG  FA+ L D+
Sbjct: 298  LESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADM 357

Query: 1148 FFS-NDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKS 1324
            F S NDPP  RMSAV+YLAS+LSRGKFL+ SLV + LKRLVDWCL Y +     D NPK+
Sbjct: 358  FVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTL-NVDPNPKA 416

Query: 1325 HSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFL 1504
            H VFYSGCQAIMYVLCFRMRS++++PRLKS+LLLMPI  +L H L+PLKVC P IV+EFL
Sbjct: 417  HKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL 476

Query: 1505 QQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            +QAK A LFT S   E FIFN   L+ S+ SR+FGG
Sbjct: 477  RQAKVANLFTPS---ENFIFNG--LLESDYSRSFGG 507


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 626

 Score =  572 bits (1473), Expect = e-160
 Identities = 314/516 (60%), Positives = 386/516 (74%), Gaps = 6/516 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTP 259
            MG EL  ++A     MEDVN++D +LV  +R  L S    + D Y QLV V+H +  L+P
Sbjct: 1    MGAELENNQA-QLHAMEDVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+VAL+VT LKALSGAVSCIDI  HESLL+AIF MS+W YG +V DAL ELI+SLA S+G
Sbjct: 60   DEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
            K++ SCL+MLV +F+PP +  DLLK+  GL RK+ VLS+VH+ALKDISDLVPLAP +L  
Sbjct: 120  KYVDSCLDMLVNNFMPPNSYMDLLKKPHGLTRKEEVLSRVHTALKDISDLVPLAPLRLEQ 179

Query: 620  IVLGRMPKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSH 799
             V+ +M ++   E L  I  YVE+MLRLE GA+ E VG ++L  LV +L++LDVEI W  
Sbjct: 180  KVVHKMQRVFFNESLTTI--YVENMLRLEKGALSEFVGRKILTALVDKLLDLDVEIGWDD 237

Query: 800  ILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSRT----VVAEKLDSLMVLTFEH 967
            IL+DD SKGIF+MELED ++T DD   D  E P E S R+    V+AE LDSL+VLTFEH
Sbjct: 238  ILQDDFSKGIFEMELEDDDDTTDDINEDSSELPRELSRRSLGGNVIAETLDSLIVLTFEH 297

Query: 968  LKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDI 1147
            L+SC   GRL +VFDIL+ SF+ TVL AYKSKFAQF++FYACSLDPE CG  FA+ L D+
Sbjct: 298  LESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYACSLDPEVCGARFAISLADM 357

Query: 1148 FFS-NDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKS 1324
            F S NDPP  RMSAV+YLAS+LSRGKFL+ SLV + LKRLVDWCL Y +     D NPK+
Sbjct: 358  FVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLVDWCLEYGKTL-NVDPNPKA 416

Query: 1325 HSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFL 1504
            H VFYSGCQAIMYVLCFRMRS++++PRLKS+LLLMPI  +L H L+PLKVC P IV+EFL
Sbjct: 417  HKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLTHRLSPLKVCLPSIVEEFL 476

Query: 1505 QQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            +QAK A LFT S   E FIFN   L+ S+ SR+FGG
Sbjct: 477  RQAKVANLFTPS---ENFIFNG--LLESDYSRSFGG 507


>ref|XP_007046443.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
            gi|590701668|ref|XP_007046444.1| Major facilitator
            superfamily protein isoform 1 [Theobroma cacao]
            gi|590701672|ref|XP_007046445.1| Major facilitator
            superfamily protein isoform 1 [Theobroma cacao]
            gi|508698704|gb|EOX90600.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698705|gb|EOX90601.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698706|gb|EOX90602.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 628

 Score =  566 bits (1458), Expect = e-158
 Identities = 320/516 (62%), Positives = 383/516 (74%), Gaps = 6/516 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMED--VNVSDLELVHLVRDALISD-PRESDSYGQLVEVLHRKVNL 253
            MG+EL      Y EM ED  VN +D E+V  V+DAL S    +S+SY QLV V+H    L
Sbjct: 1    MGLELPK----YPEMEEDNFVNFTDSEIVSHVKDALTSVLSGDSNSYNQLVAVMHHSKRL 56

Query: 254  TPDDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASS 433
             PD+VAL+ TTLKAL GAVSCID   H+SLLSAIF MSMW+YGP V+DALAELIVSLA S
Sbjct: 57   APDEVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVADALAELIVSLAIS 116

Query: 434  SGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKL 613
            +GK+L  CL MLV +F PP    D LK  RGL RK +VLS VH+A K ISD +PLAP +L
Sbjct: 117  NGKYLDLCLGMLVSNFTPPPYFLDKLKLPRGLERKGQVLSLVHAAFKKISDYIPLAPLRL 176

Query: 614  CPIVLGRMPKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKW 793
              IVL  MP +  K+  IVI  YVE+ML+LESG IGELVGS ML  +V +LIELD+EI W
Sbjct: 177  SNIVLQGMPTIYHKDRAIVI--YVENMLKLESGEIGELVGSTMLMAVVDQLIELDLEIGW 234

Query: 794  SHILRDDSSKGIFDMELEDVEETADDAENDGGEF--PGESSSRTVVAEKLDSLMVLTFEH 967
              IL+DD SKGIF+MELEDV+E  + AE D GEF    +S +   +AE LD+L+VLTFEH
Sbjct: 235  DAILQDDFSKGIFEMELEDVDEVEESAEQDTGEFRLSRKSLAGNSIAELLDNLLVLTFEH 294

Query: 968  LKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDI 1147
            L+SC   GRL KVF+ L++SF+ITV++AYKSKF QFVMFYAC+LDP+ CG+ FA ML D+
Sbjct: 295  LESCERAGRLAKVFETLLQSFQITVMSAYKSKFTQFVMFYACALDPDYCGMRFATMLADL 354

Query: 1148 FFSNDPPN-TRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKS 1324
            F  +  P   RMSAVAYLASYLSR KFLS SL+ S LKRLVDWCL Y +    GDINP +
Sbjct: 355  FVQDSHPQPIRMSAVAYLASYLSRAKFLSASLISSMLKRLVDWCLEYGKTP-DGDINPNA 413

Query: 1325 HSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFL 1504
            H VFYSGCQAIMYVLCFRM+  +DVPRLK + LLMP++ ILKH LNPLKVC P +V+EFL
Sbjct: 414  HRVFYSGCQAIMYVLCFRMKVFMDVPRLKMQ-LLMPMEQILKHKLNPLKVCLPSVVEEFL 472

Query: 1505 QQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            +Q+KAA LFT S   +TF+F+   L+ SELSRAFGG
Sbjct: 473  RQSKAACLFTVS---KTFVFDG--LLESELSRAFGG 503


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Glycine max]
            gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Glycine max]
          Length = 627

 Score =  545 bits (1405), Expect = e-152
 Identities = 297/502 (59%), Positives = 381/502 (75%), Gaps = 7/502 (1%)
 Frame = +2

Query: 128  MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 304
            ME+ + SD +LV   R  L++    + ++Y +LV  LH K NL PD+VA++VTTLKALSG
Sbjct: 15   MENDDFSDSQLVRHFRGVLVAVTTGDRENYDELVGYLHPKKNLNPDEVAILVTTLKALSG 74

Query: 305  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 484
            AVS ID   HESLL A+  MS+W+YG D+ DAL ELI+SLA+S+GK++  CLEMLV HF+
Sbjct: 75   AVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELIISLAASNGKYIDWCLEMLVKHFV 134

Query: 485  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQKEPL 664
            PP  + D L+Q  G+ RK++VLS+VH+ALK+I+DLVPLAP +L PIV+ +MP +  KE  
Sbjct: 135  PPFYLLDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETE 194

Query: 665  IVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMEL 844
            IV  +YVE+MLRLESGAIGE VGS ML  LV RL+ELDVEI W  IL++D +KGIF+MEL
Sbjct: 195  IV--MYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQED-AKGIFEMEL 251

Query: 845  EDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKVF 1009
            EDV E AD+ EN     P E  +R      +V EKLDSLMVL F HL+SC   GRL +VF
Sbjct: 252  EDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVF 311

Query: 1010 DILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMSA 1186
            D L+ SF+ TVLNAYKSKF Q+VMFYAC+LDPE CGV FA++L D+F  + +PP TRMSA
Sbjct: 312  DTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSA 371

Query: 1187 VAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYV 1366
             AYLASYL+R KFLS +LV + ++ LVDWC +YC+ +   D+NP++H VFYSGCQAIMY+
Sbjct: 372  AAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLR-DFDMNPRAHQVFYSGCQAIMYI 430

Query: 1367 LCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAG 1546
            LCFRMRSL+D+PRLK +LL MP++ ILKH L+PLKVC P +V EFL+QAKAA LF  S  
Sbjct: 431  LCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQLFMAS-- 488

Query: 1547 TETFIFNEHLLVGSELSRAFGG 1612
             E+F+F++  ++ S+LS+AFGG
Sbjct: 489  -ESFVFDD--MLESDLSKAFGG 507


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 628

 Score =  539 bits (1389), Expect = e-150
 Identities = 298/517 (57%), Positives = 386/517 (74%), Gaps = 7/517 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTP 259
            MG    +DK  + +M E+ + SD +LVH  R  L++    + ++Y +LV  LH K +L P
Sbjct: 1    MGRVQVSDKEEFSQM-ENNDFSDSQLVHHFRGVLVAVTTGDRENYDELVGYLHPKKHLNP 59

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            D+VA++VTTLKALSGAVS ID   HESLL A+  MS+W+ G D+ DAL ELI+SLA S+G
Sbjct: 60   DEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIMDALLELIISLAVSNG 119

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
            K++  CLEMLV +F+PP  + D L+Q  G+ RK++VLS+VH+ALK+I+DLVPLAP +L P
Sbjct: 120  KYIDWCLEMLVKNFVPPFYLLDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSP 179

Query: 620  IVLGRMPKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSH 799
            IV+ +MP +  KE  IV  +YVE+MLRLESGA+GE VGS ML  LV RL+ELDVEI W  
Sbjct: 180  IVIQKMPSVFSKETEIV--MYVENMLRLESGALGETVGSTMLPALVDRLLELDVEIGWDG 237

Query: 800  ILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFE 964
            IL++D +KGIF+MELEDV E  D+ EN       E  +R      +V EKLDSLMVL F 
Sbjct: 238  ILQED-AKGIFEMELEDVTEFTDEDENCDSMLSSELLNRKNLQGNLVVEKLDSLMVLAFL 296

Query: 965  HLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLED 1144
            HL+SC   GRL +VF+ L+ SF+ TVLNAYKSKF QFVMFYAC+LDPE CGV FA++L D
Sbjct: 297  HLESCQNSGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLAD 356

Query: 1145 IFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPK 1321
            +F  + +PP TRMSAVAYLASYL+R KFLS +LV S ++ LVDWC +YC+ +   D+NP+
Sbjct: 357  MFGGDANPPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLVDWCYAYCKFR-DFDMNPR 415

Query: 1322 SHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEF 1501
            +H VFYSGCQAIMY++CFRMRSL+DVPRLK +LL MP++ ILKH L+PLKVC P +V EF
Sbjct: 416  AHQVFYSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEF 475

Query: 1502 LQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            L+QAKAA LF  S   E+F+F++  ++ S+LS+AFGG
Sbjct: 476  LRQAKAAQLFMAS---ESFVFDD--MLESDLSKAFGG 507


>ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  531 bits (1369), Expect = e-148
 Identities = 281/424 (66%), Positives = 334/424 (78%), Gaps = 7/424 (1%)
 Frame = +2

Query: 362  MSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKD 541
            MSMW+Y PDV DAL  LI+SLA+S+GK++ SCL MLV +F PP    D LK+  GL RK 
Sbjct: 1    MSMWNYDPDVMDALKGLIISLAASNGKYVDSCLTMLVSNFTPPSYFLDKLKEPHGLERKH 60

Query: 542  RVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQK-EPLIVIMVYVESMLRLESGAI 718
            +VLS+VH+ALK I DLVPLAP +L PIV+ RMP +  K E L +I+VY E+ML+LES A+
Sbjct: 61   QVLSRVHAALKSIFDLVPLAPTRLLPIVVQRMPTVHNKHERLKMIVVYTENMLKLESSAM 120

Query: 719  GELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMELEDVEETADDAENDGGEFP 898
            GELV S +L  +V RLI+LD+EI W  IL DD SKGIF+MELEDVEE ADDAE  G E P
Sbjct: 121  GELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELP 180

Query: 899  GESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSK 1063
              S SR      ++AE LDSLMVLTFEHL+SC   GRL++VF+IL++SF+ITVLNAYKSK
Sbjct: 181  SGSLSRKSLSGNLIAELLDSLMVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSK 240

Query: 1064 FAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSL 1240
            FAQFVMFYAC+LDPE CG+ FA ML D+F S   PP TRMSAV+YLAS+LSR +FLSP  
Sbjct: 241  FAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSAVSYLASFLSRARFLSPCF 300

Query: 1241 VVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSEL 1420
            +VS LKRLVDWCL YC   GG DINPK+H VFYSGCQAIMYVLCFRMRS++D+PRLKS+L
Sbjct: 301  IVSLLKRLVDWCLEYCNILGG-DINPKAHRVFYSGCQAIMYVLCFRMRSIMDIPRLKSQL 359

Query: 1421 LLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSR 1600
            LLMP++ +LKH LNPLKVC P +V EFLQQ+KAA LFT S   ETF+FN+  L+ SELSR
Sbjct: 360  LLMPLETVLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVS---ETFVFND--LLESELSR 414

Query: 1601 AFGG 1612
            AFGG
Sbjct: 415  AFGG 418


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
            gi|223536316|gb|EEF37967.1| transcription initiation
            factor ia, putative [Ricinus communis]
          Length = 640

 Score =  530 bits (1366), Expect = e-148
 Identities = 297/528 (56%), Positives = 378/528 (71%), Gaps = 18/528 (3%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMED--VNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNL 253
            MGVEL +      E MED  VN +D +LV+ VRDAL S    +++SY QLV V+H    L
Sbjct: 1    MGVELDSQYKKEIEDMEDDGVNYTDSDLVYHVRDALHSVQYGDTNSYDQLVGVMHHSQRL 60

Query: 254  TPDDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASS 433
            TPDDVAL++T+LKALSGAVS ID   H+ LL +IFGMS+W+YGPDV +AL ELI++LA+S
Sbjct: 61   TPDDVALLLTSLKALSGAVSYIDECHHDRLLQSIFGMSIWNYGPDVMEALLELIIALAAS 120

Query: 434  SGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKL 613
            +GK++  CL+MLV +F+PP  + D+LK  RG A+K++VLS++H+AL+DI+ L+P+A  +L
Sbjct: 121  NGKYIDPCLKMLVTNFVPPMYLIDILKLPRGQAKKEQVLSRLHTALEDIAHLIPMAASRL 180

Query: 614  CPIVLG---RMPKMSQKEPL-------IVIMVYVESMLRLESGAIGELVGSEMLKELVYR 763
               V+    R+P   +K+             +YVE+MLRLESGAI E VGS ML  +V +
Sbjct: 181  STEVVSEIQRIPTTFKKDQYHEKDRVKYRTEIYVENMLRLESGAIREFVGSRMLMAVVDK 240

Query: 764  LIELDVEIKWSHILRDDSSKGIFDMELEDVEETADDAE-NDGGEFP----GESSSRTVVA 928
            LI+LDV I W  ILRDDS KGIF +ELED +E +DD E ND GE P     +S    V A
Sbjct: 241  LIDLDVAIGWDDILRDDSCKGIFAIELEDADEVSDDDEYNDYGELPRTLSHKSLGENVAA 300

Query: 929  EKLDSLMVLTFEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPE 1108
            + LDSLMV  FEHL+ CA   RL  VF+ L++SF +T+LN YKSKFAQFVMFYAC+LDPE
Sbjct: 301  DLLDSLMVRIFEHLELCANNKRLNDVFETLLDSFMLTILNTYKSKFAQFVMFYACALDPE 360

Query: 1109 KCGVTFAVMLEDIFFSNDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYC 1288
             CGV FA  L D F   + P TRMSAVAYLASYL+R KFL  + V S+LKRLVDWC  YC
Sbjct: 361  NCGVEFAERLRDRFTYGENPLTRMSAVAYLASYLARAKFLPIAFVASTLKRLVDWCSEYC 420

Query: 1289 QAQGGGDINPKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPL 1468
            + Q  GD+NPK+H VFYSGCQAI+YVLCFRM S++D+P LKS+LL MP++ I+KH L PL
Sbjct: 421  RNQ-DGDMNPKAHRVFYSGCQAILYVLCFRMSSMMDIPWLKSQLLHMPLEQIMKHKLGPL 479

Query: 1469 KVCFPCIVDEFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            KVC P IV+EFL+QAKAA LFT S   +T  F +  ++ SE S+ FGG
Sbjct: 480  KVCLPSIVEEFLKQAKAAHLFTTS---QTSSFED--VLESEFSKDFGG 522


>ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  530 bits (1364), Expect = e-147
 Identities = 281/424 (66%), Positives = 334/424 (78%), Gaps = 7/424 (1%)
 Frame = +2

Query: 362  MSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKD 541
            MSMW+Y PD+ DAL  LI+SLA+SSGK++ SCL MLVG+F PP    D LK+  GL RK 
Sbjct: 1    MSMWNYDPDIMDALKGLIISLAASSGKYVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKH 60

Query: 542  RVLSQVHSALKDISDLVPLAPDKLCPIVLGRMPKMSQK-EPLIVIMVYVESMLRLESGAI 718
            +VLS+VH+ALK I DLVPLAP +L PIV+ RMP +  K E L +I+VY E+ML+LES A+
Sbjct: 61   QVLSRVHAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTENMLKLESSAM 120

Query: 719  GELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFDMELEDVEETADDAENDGGEFP 898
            GELV S +L  +V RLI+LD+EI W  IL DD SKGIF+MELEDVEE ADDAE  G E P
Sbjct: 121  GELVRSTLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELP 180

Query: 899  GESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSK 1063
              S SR      ++AE LDSL+VLTFEHL+SC   GRL++VF+IL++SF+ITVLNAYKSK
Sbjct: 181  SGSISRKSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSK 240

Query: 1064 FAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSL 1240
            FAQFVMFYAC+LDPE CG+ FA ML D+F S   PP TRMS+V+YLASYLSR +FLSP  
Sbjct: 241  FAQFVMFYACALDPENCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCF 300

Query: 1241 VVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSEL 1420
            +VS LKRLVDWCL YC   GG +INPK+H VFYSGCQAIMYVLCFRMRS++DVPRLKS+L
Sbjct: 301  IVSLLKRLVDWCLEYCNIPGG-NINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQL 359

Query: 1421 LLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSR 1600
            LLMP++ +LKH LNPLKVC P +V EFLQQ+KAA LFT S   ETFIFN+  L+ SELSR
Sbjct: 360  LLMPLETVLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVS---ETFIFND--LLESELSR 414

Query: 1601 AFGG 1612
             FGG
Sbjct: 415  DFGG 418


>ref|XP_007134114.1| hypothetical protein PHAVU_010G020100g [Phaseolus vulgaris]
            gi|561007159|gb|ESW06108.1| hypothetical protein
            PHAVU_010G020100g [Phaseolus vulgaris]
          Length = 620

 Score =  530 bits (1364), Expect = e-147
 Identities = 290/511 (56%), Positives = 378/511 (73%), Gaps = 7/511 (1%)
 Frame = +2

Query: 101  TDKAGYCEMMEDVNVSDLELVHLVRDALISDPR-ESDSYGQLVEVLHRKVNLTPDDVALI 277
            +DK G   +ME+   SD +LV   R  L    + +  +Y +LV  LH K NL PD+VA++
Sbjct: 7    SDKEG-SSVMENGGYSDYQLVRHFRSVLEEVTKGDRGNYDELVGYLHPKKNLNPDEVAIL 65

Query: 278  VTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSC 457
            VTTL+ALSGAV CID + HESLL A+  MS+W+YG +V DAL ELI+SLA+S+GK++  C
Sbjct: 66   VTTLRALSGAVCCIDPNHHESLLFAVSRMSLWNYGTEVMDALLELIISLAASNGKYIDWC 125

Query: 458  LEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRM 637
            LEMLV HF+PP  + D L    G+ RK++VLS+VH+ALK+I+DLVPLAP +LCPIV+  M
Sbjct: 126  LEMLVKHFVPPFYLIDSLNNENGIDRKNKVLSRVHAALKEIADLVPLAPLRLCPIVVQNM 185

Query: 638  PKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDS 817
            P +  KE  IVI  Y E+M +LE GAIGE+VG+ +L  LV RL+ELDVEI W  IL++D 
Sbjct: 186  PNVFSKEREIVI--YFENMFKLEGGAIGEIVGATILPALVDRLLELDVEIGWDGILQED- 242

Query: 818  SKGIFDMELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCA 982
            S+GIFDMELED+ + AD+ +N       E  +R       V EKLDSL+VL   HL+SC 
Sbjct: 243  SRGIFDMELEDIIKLADEDDNCHNMPQSELLNRKNLQGNQVVEKLDSLIVLALLHLESCQ 302

Query: 983  VGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN- 1159
              GRL +VFD+L+ SF+ TVLNAYKSKF QFVMFYAC+LDPE CGV FA++L D+F S+ 
Sbjct: 303  SSGRLTEVFDVLLPSFQKTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFASDL 362

Query: 1160 DPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFY 1339
            +PP TRMSAVAYLASYLSR KFLS +LV + ++ LVD C +YC+ +   D+NP++H VFY
Sbjct: 363  NPPITRMSAVAYLASYLSRAKFLSAALVTTIIQSLVDLCYAYCKFR-DSDLNPRAHQVFY 421

Query: 1340 SGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKA 1519
            SGCQAIMY++CFRM+SL+DVPRLK +LL MP++ I KH L+PLKVC P +V EFL+QAKA
Sbjct: 422  SGCQAIMYIMCFRMKSLMDVPRLKLQLLNMPMEAIWKHKLSPLKVCLPTVVVEFLRQAKA 481

Query: 1520 AGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            A LF  S   E+F+F++  ++ S+LS+AFGG
Sbjct: 482  AKLFMAS---ESFVFDD--MLESDLSKAFGG 507


>ref|XP_004508346.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Cicer arietinum]
            gi|502151248|ref|XP_004508347.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Cicer arietinum]
            gi|502151250|ref|XP_004508348.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X3 [Cicer arietinum]
          Length = 620

 Score =  518 bits (1334), Expect = e-144
 Identities = 287/505 (56%), Positives = 375/505 (74%), Gaps = 10/505 (1%)
 Frame = +2

Query: 128  MEDVNVSDLELVHLVRDALISDPRE-SDSYGQLVEVLHRKVNLTPDDVALIVTTLKALSG 304
            ME  +VSDL+L++ VRD L+       ++Y +LV  LH K N + ++ A +VTTL+ LSG
Sbjct: 16   METTDVSDLQLIYSVRDTLVEVTLGVRENYDELVRYLHPKRNPSAEEFAALVTTLRGLSG 75

Query: 305  AVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSGKFLVSCLEMLVGHFI 484
            AVS ID   H++LL A+  +S+W+Y   V DAL ELIVSLA S+G ++  CLEMLV HF+
Sbjct: 76   AVSYIDPAHHDALLFALSRLSLWNYATVVMDALLELIVSLAVSNGMYIDWCLEMLVKHFV 135

Query: 485  PPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCPIVLGRMP---KMSQK 655
            PP  + D LK++ G+ +K++VLS+VH+AL+ ISDLVPLAP +L PIV+ +MP   KMS+ 
Sbjct: 136  PPIYLFDFLKETNGIEKKNKVLSRVHAALEQISDLVPLAPLRLSPIVVQKMPKSCKMSEP 195

Query: 656  EPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWSHILRDDSSKGIFD 835
            E    I++YVE+MLRLESGAIGE+VG  ML  LV RLIELDV I W   L++D  K IF+
Sbjct: 196  E----IVMYVENMLRLESGAIGEIVGGTMLPALVDRLIELDVGIGWDGNLQED-VKCIFE 250

Query: 836  MELEDVEETADDAENDGGEFPGESSSR-----TVVAEKLDSLMVLTFEHLKSCAVGGRLV 1000
            +ELE++ E AD+ EN       +  +R       VAE+LDSL+VL F HL+SC   GR+ 
Sbjct: 251  LELEEIAEFADEDENIFNMSTTDMLNRNNLQGNKVAEQLDSLIVLIFLHLESCQSSGRIA 310

Query: 1001 KVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLEDIFFSN-DPPNTR 1177
            +VFDIL++SF  TVLNAYKSKF QFVMFYAC+LDPE CGV FA++L ++F S+ +PP TR
Sbjct: 311  EVFDILLKSFERTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLTEMFGSDVNPPITR 370

Query: 1178 MSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPKSHSVFYSGCQAI 1357
            MSAVAYLASYLSR KFLS +LV S ++RLVDWC SYC      D+NP++H VFYSGCQAI
Sbjct: 371  MSAVAYLASYLSRAKFLSSALVASVIQRLVDWCFSYCMLH-DVDMNPQAHQVFYSGCQAI 429

Query: 1358 MYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEFLQQAKAAGLFTE 1537
            MY+LCFRMRSL+DVPRL+ +L+ MP++ +LKH L+PLKVC P +V+EFL+QAKAA LF  
Sbjct: 430  MYLLCFRMRSLVDVPRLRMQLIKMPLEPMLKHKLSPLKVCLPSVVEEFLRQAKAARLFMT 489

Query: 1538 SAGTETFIFNEHLLVGSELSRAFGG 1612
            S   E+F+FN+  L+ S+LS+AFGG
Sbjct: 490  S---ESFVFND--LLESDLSKAFGG 509


>ref|XP_002307198.2| RNA polymerase 1 specific transcription initiation factor RRN3 family
            protein [Populus trichocarpa] gi|550338523|gb|EEE94194.2|
            RNA polymerase 1 specific transcription initiation factor
            RRN3 family protein [Populus trichocarpa]
          Length = 637

 Score =  505 bits (1301), Expect = e-140
 Identities = 288/528 (54%), Positives = 369/528 (69%), Gaps = 18/528 (3%)
 Frame = +2

Query: 83   MGVELATDKAGYC------EMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHR 241
            MGVEL      Y       E+ E V+++D +LV+ VRDAL+S    +  SY QLV VLH 
Sbjct: 1    MGVELTHQYTEYRAMEDQEEVEEGVSITDWDLVYHVRDALLSVKTGDRSSYHQLVGVLHH 60

Query: 242  KVNLTPDDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVS 421
            +    PD VAL++T+LKALSGAVS I+   H SLL +IFGMSMW+  PDV DAL ELI+ 
Sbjct: 61   RDRSAPDKVALLLTSLKALSGAVSYINDVDHVSLLQSIFGMSMWNCAPDVMDALLELIIC 120

Query: 422  LASSSGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLA 601
            LA+S+GK++  CL+MLV +F+PP    D+L+  RG A+KD+VL +VH+ L+ I DLVPLA
Sbjct: 121  LAASNGKYVDLCLDMLVNNFMPPME-SDMLRHPRGQAKKDQVLPRVHTGLEVIVDLVPLA 179

Query: 602  PDKLCPIVLGRMPKMSQKEPLIVIM-----VYVESMLRLESGAIGELVGSEMLKELVYRL 766
              KL   V+ + P   +K+  +  +     +Y+++ML LE GAI E VG  ML E+V  +
Sbjct: 180  ALKLSTNVVQKRPMFFRKDFNMDRLKCRMEIYLKNMLMLEGGAIREFVGHSMLVEVVNMM 239

Query: 767  IELDVEIKWSHILRDDSSKGIFDMELEDVEETA-DDAENDGGEFPGESSSRT----VVAE 931
            +ELDV I W  +LRDD SKGIF MELED EE A DD + + GE P   + R     V A+
Sbjct: 240  LELDVAIGWDELLRDDPSKGIFTMELEDEEEEAGDDGQANDGELPSTLTLRNLGKNVTAD 299

Query: 932  KLDSLMVLTFEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEK 1111
             LDSLM+   EHL++CA   RL +VF+ L+ SF  T+LN YKSKF+QF +FYAC+LDPE 
Sbjct: 300  LLDSLMIQFLEHLEACADKKRLSEVFETLLSSFMATILNTYKSKFSQFTIFYACALDPEN 359

Query: 1112 CGVTFAVMLEDIFFSN-DPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYC 1288
            CGV FA  L D+F S  +PP TRMSAVAYL+SYL+RGKFLS + V++ LKRLVDWCL YC
Sbjct: 360  CGVKFAQTLVDLFISTCNPPVTRMSAVAYLSSYLARGKFLSAAFVMNMLKRLVDWCLRYC 419

Query: 1289 QAQGGGDINPKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPL 1468
            + Q   D+NPK+H VFYS CQ IMYVLCF M+S+++VP LKS+LLLMPI+ ILKH L PL
Sbjct: 420  EEQDS-DMNPKAHQVFYSACQGIMYVLCFHMKSIMNVPTLKSQLLLMPIEPILKHKLGPL 478

Query: 1469 KVCFPCIVDEFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            +VC P IV+EFL+QAKAA LFT S   + FIF +  L+ S+LSR FGG
Sbjct: 479  EVCLPSIVNEFLKQAKAAHLFTIS---KAFIFED--LLESDLSRDFGG 521


>ref|XP_007204094.1| hypothetical protein PRUPE_ppa002914mg [Prunus persica]
            gi|462399625|gb|EMJ05293.1| hypothetical protein
            PRUPE_ppa002914mg [Prunus persica]
          Length = 622

 Score =  503 bits (1295), Expect = e-139
 Identities = 288/517 (55%), Positives = 371/517 (71%), Gaps = 7/517 (1%)
 Frame = +2

Query: 83   MGVELATDKAGYCEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVNLTP 259
            MGVEL  D+A +   M D ++ D  LV+  RD L S    +++ Y QL+  ++ +  L  
Sbjct: 1    MGVELRDDEAAF-RTMGDHDLIDSYLVYRARDTLCSVSSGDTEDYRQLLSAMNPE-ELGA 58

Query: 260  DDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASSSG 439
            ++VA++VT LKAL+GAV+ ID   H  LLSAIF MS+W+Y PDV DAL E I SLA+SSG
Sbjct: 59   NEVAMLVTNLKALAGAVAYIDNVLHNELLSAIFKMSLWNYKPDVMDALIEFIESLATSSG 118

Query: 440  KFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKLCP 619
            K++  CL ML   F PP +    L   + LARKD VLS+VHS+LK I+DLVPL+P +L P
Sbjct: 119  KYVDDCLAMLTCQFFPPGS----LPLPKILARKDGVLSRVHSSLKYIADLVPLSPVRLVP 174

Query: 620  IVLGRMPKMS-QKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKWS 796
            IVL   P+        + +++YVE+ML+LESG +GE+V   ML  +V  L++LDVEI W 
Sbjct: 175  IVLDGKPQYRFNNTSTLSLVIYVENMLKLESGVLGEVVRIPMLAGVVDLLLDLDVEIGWE 234

Query: 797  HILRDDSSKGIFDMELEDVEETADDAENDGGEFPGESSSRTV----VAEKLDSLMVLTFE 964
             I ++DSSKGIF+MELEDV+E+ DD  ND  E P + S +T+     AEKLDSLMVLTFE
Sbjct: 235  DI-KNDSSKGIFEMELEDVDESRDDDLNDDSELPRQLSRKTLGGNSFAEKLDSLMVLTFE 293

Query: 965  HLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVMLE- 1141
            HL+SC V  RL+++FD L+ESF+ TVL AYKSKFAQFV+FYACSLDP+ CGVTFA+MLE 
Sbjct: 294  HLESCQVADRLIEIFDTLLESFKKTVLTAYKSKFAQFVIFYACSLDPKNCGVTFALMLEH 353

Query: 1142 DIFFSNDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDINPK 1321
              FFS +PP  RMSAVAYLASYLSR KFLS  +V  +L+RLVDWC+ Y + Q   +INP+
Sbjct: 354  TFFFSTNPPLLRMSAVAYLASYLSRAKFLSVFVVAGTLERLVDWCVKYVKMQ-DDEINPE 412

Query: 1322 SHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVDEF 1501
            +H +FYSGCQAIMY+LCFRMRS++D P+LK  L+ +P++ IL + L+PLKVC P IV EF
Sbjct: 413  AHRIFYSGCQAIMYLLCFRMRSMMDDPQLKPWLVRLPLESILNNKLSPLKVCLPSIVLEF 472

Query: 1502 LQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            L+QAKAA LF  S   E F F+++L   SELSR FGG
Sbjct: 473  LRQAKAARLFMTS---EKFNFDDYL--ESELSREFGG 504


>ref|XP_002881355.1| RNA polymerase I specific transcription initiation factor RRN3 family
            protein [Arabidopsis lyrata subsp. lyrata]
            gi|297327194|gb|EFH57614.1| RNA polymerase I specific
            transcription initiation factor RRN3 family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 614

 Score =  486 bits (1252), Expect = e-135
 Identities = 274/519 (52%), Positives = 364/519 (70%), Gaps = 11/519 (2%)
 Frame = +2

Query: 89   VELATDKAGY--CEMMEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVN--L 253
            VEL +D +     + +++V++SD +LV  VR+AL S    + D Y +LV V+++ +    
Sbjct: 4    VELLSDPSSLYTVDYVDNVDLSDTDLVQTVRNALTSVKTGDPDLYSELVGVINKDIKEFR 63

Query: 254  TPDDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLASS 433
             PD VA + T LKALSG+V+CIDI  H+ LLS++FGM +W + P V DAL  L++SLA +
Sbjct: 64   DPDAVAQLETVLKALSGSVACIDIVHHQKLLSSLFGMKLWDHRPVVMDALVNLVISLAVT 123

Query: 434  SGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDKL 613
             GK+L  CL MLV +F+PP +V + L   R L +K  VLS+VH+AL  IS LVPL P +L
Sbjct: 124  RGKYLDPCLNMLVSNFVPPPSVVNNLSHPRVLNKKIEVLSRVHAALLKISILVPLTPSRL 183

Query: 614  CPIVLGRMPKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIKW 793
             P++   MPK+ +K+  IVI  YVES+L+LE+  IG++ GS +L  ++ RL +LD+EI W
Sbjct: 184  VPMLFQEMPKIHKKDHSIVI--YVESLLKLENSPIGQVGGSMILGVVMERLRDLDLEIGW 241

Query: 794  SHILRDDSSKGIFDMELEDVEETADDAENDGGEFP-----GESSSRTVVAEKLDSLMVLT 958
              I +DDSS+G+FDMELED  E      N+G E P      ++S  +VV++ LD LMV+ 
Sbjct: 242  DDIPQDDSSRGMFDMELEDAVE---GTINEGDELPVGPLKQDTSDGSVVSKLLDKLMVVA 298

Query: 959  FEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVML 1138
            FEHL+SC   GRL +VFDIL+ESF   +LN YKSKF QF+MFYACSLDPE CGV FA  L
Sbjct: 299  FEHLESCQNDGRLDQVFDILLESFENFILNTYKSKFTQFLMFYACSLDPENCGVKFASKL 358

Query: 1139 EDIFF-SNDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDIN 1315
             +IF  SN  P+TRMSAVAYLAS+L+RGKFL  S V S LKRL+D C+ YC+     DI 
Sbjct: 359  VEIFLSSNKHPSTRMSAVAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRT-CNDDIR 417

Query: 1316 PKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIVD 1495
            P+ H +F+SGCQAIMYVLCFRMRS++DVPR +S+  L P++ IL H LNPL+VC P +V 
Sbjct: 418  PEEHQIFFSGCQAIMYVLCFRMRSILDVPRFRSQ--LTPLESILMHKLNPLRVCLPSVVA 475

Query: 1496 EFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
            EFL+QAKA GLF  S   ++FIF++  L+ SELSRAFGG
Sbjct: 476  EFLRQAKAGGLFIVS---DSFIFDD--LLESELSRAFGG 509


>ref|NP_850236.1| RNA polymerase I specific transcription initiation factor RRN3
            protein [Arabidopsis thaliana] gi|20465617|gb|AAM20140.1|
            unknown protein [Arabidopsis thaliana]
            gi|23296957|gb|AAN13210.1| unknown protein [Arabidopsis
            thaliana] gi|330253924|gb|AEC09018.1| RNA polymerase I
            specific transcription initiation factor RRN3 protein
            [Arabidopsis thaliana]
          Length = 613

 Score =  484 bits (1245), Expect = e-134
 Identities = 274/520 (52%), Positives = 364/520 (70%), Gaps = 12/520 (2%)
 Frame = +2

Query: 89   VELATDKAGYCEM---MEDVNVSDLELVHLVRDALIS-DPRESDSYGQLVEVLHRKVN-- 250
            VEL +D +  C +   +++V++SD +LV  VR AL S    +SD Y ++V V+ R +   
Sbjct: 4    VELMSDPSSLCTVENYVDNVDLSDTQLVQTVRKALTSVKTGDSDLYSEMVGVMARDIKEF 63

Query: 251  LTPDDVALIVTTLKALSGAVSCIDIDRHESLLSAIFGMSMWSYGPDVSDALAELIVSLAS 430
              PD VA + T LKALSGAV+CID+  H+ LLSA+F M +W + PDV DAL  L++SLA 
Sbjct: 64   KDPDVVAQLETVLKALSGAVACIDVLHHQKLLSALFRMKLWDHRPDVMDALVNLVISLAV 123

Query: 431  SSGKFLVSCLEMLVGHFIPPKNVQDLLKQSRGLARKDRVLSQVHSALKDISDLVPLAPDK 610
            +SGK+L SCL MLV +F+PP  V + L  SR L +K  VLS+VH+AL  IS LVPL P +
Sbjct: 124  TSGKYLDSCLNMLVSNFVPPPWVVNNLSHSRILNKKIDVLSRVHAALLKISILVPLTPSR 183

Query: 611  LCPIVLGRMPKMSQKEPLIVIMVYVESMLRLESGAIGELVGSEMLKELVYRLIELDVEIK 790
            L P++  +MPKM +K+  IVI  YVES+L+LE+ +IG++ GS +L  ++ RL +LD+EI+
Sbjct: 184  LVPMLFQQMPKMHKKDHSIVI--YVESLLKLENSSIGQVGGSMILGMVMERLRDLDLEIE 241

Query: 791  WSHILRDDSSKGIFDMELEDVEETADDAENDGGEFP-----GESSSRTVVAEKLDSLMVL 955
            W  I +DDSS+G+FDMELED    A+   NDG E P      ++S  ++V++ LD LMV+
Sbjct: 242  WDDIPQDDSSRGMFDMELED---AAEGTMNDGDELPVGPLKQDTSDGSIVSKLLDKLMVV 298

Query: 956  TFEHLKSCAVGGRLVKVFDILVESFRITVLNAYKSKFAQFVMFYACSLDPEKCGVTFAVM 1135
             FEHL+SC   GRL +VF+ L +SF   +LN YKSKF QF++FYACSLDPE CGV FA  
Sbjct: 299  AFEHLESCQNDGRLDQVFESLFKSFENFILNTYKSKFTQFLIFYACSLDPENCGVKFASK 358

Query: 1136 LEDIFF-SNDPPNTRMSAVAYLASYLSRGKFLSPSLVVSSLKRLVDWCLSYCQAQGGGDI 1312
            L +IF  SN    TRMSAVAYLAS+L+RGKFL  S V S LKRL+D C+ YC+     D 
Sbjct: 359  LVEIFLSSNKHVATRMSAVAYLASFLARGKFLPVSFVASMLKRLIDECVGYCRT-CNDDT 417

Query: 1313 NPKSHSVFYSGCQAIMYVLCFRMRSLIDVPRLKSELLLMPIQLILKHPLNPLKVCFPCIV 1492
             P++H +F+SGCQAIMYVLCFRMRS++DVPR +S+  L P++ IL H LNPL VC P +V
Sbjct: 418  RPEAHQIFFSGCQAIMYVLCFRMRSILDVPRFRSQ--LTPLESILMHKLNPLMVCLPSVV 475

Query: 1493 DEFLQQAKAAGLFTESAGTETFIFNEHLLVGSELSRAFGG 1612
             EFL+QAK  GLF  S   ++FIF++  L+ SELSRAFGG
Sbjct: 476  AEFLRQAKEGGLFIVS---DSFIFDD--LLESELSRAFGG 510