BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00003191
         (1195 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic prote...    97   1e-17
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]     94   9e-17
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]     93   3e-16
emb|CAD56758.1| putative reverse transcriptase [Dahlia mosaic vi...    93   3e-16
dbj|BAO53386.1| reverse transcriptase [Cauliflower mosaic virus]       92   3e-16
dbj|BAO53393.1| reverse transcriptase [Cauliflower mosaic virus]...    92   4e-16
dbj|BAO53372.1| reverse transcriptase [Cauliflower mosaic virus]       92   4e-16
dbj|BAO53365.1| reverse transcriptase [Cauliflower mosaic virus]       92   4e-16
dbj|BAO53379.1| reverse transcriptase [Cauliflower mosaic virus]...    91   7e-16
gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]        91   7e-16
emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]     91   7e-16
dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]       91   1e-15
sp|Q00962.1|POL_CAMVN RecName: Full=Enzymatic polyprotein; Inclu...    91   1e-15
dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]       90   2e-15
sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Inclu...    90   2e-15
ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus...    90   2e-15
emb|CAH68829.1| polyprotein [Carnation etched ring virus]              90   2e-15
emb|CAD79320.2| polyprotein [Carnation etched ring virus]              90   2e-15
gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]        89   3e-15
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]          89   5e-15

>ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Figwort mosaic virus]
           gi|130600|sp|P09523.1|POL_FMVD RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58813|emb|CAA29527.1|
           unnamed protein product [Figwort mosaic virus]
          Length = 666

 Score = 97.4 bits (241), Expect = 1e-17
 Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
 Frame = -3

Query: 683 TPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSSAKPLVASIADKT 504
           T   + +I+  + FEGY+ +++  YVDTGA +C+A + +IP ELW +S K +   IA++ 
Sbjct: 28  TNPNSIYIEGKLSFEGYKSFNIHCYVDTGASLCIASRYIIPEELWENSPKDIQVKIANQE 87

Query: 503 RIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFIQYDKIVGWGHPV 330
            I +     ++ +K  G  F++ TV++ + G D LIGN F   Y PFIQ++  + +   +
Sbjct: 88  LIKITKVCKNLKVKFAGKSFEIPTVYQQETGIDFLIGNNFCRLYNPFIQWEDRIAF--HL 145

Query: 329 SNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAERGETIGNNL 198
            N +V+  ++ KA  + +  FL N++K  K T    G  I  N+
Sbjct: 146 KNEMVLIKKVTKAFSVSNPSFLENMKKDSK-TEQIPGTNISKNI 188


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score = 94.4 bits (233), Expect = 9e-17
 Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
 Frame = -3

Query: 683 TPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSSAKPLVASIADKT 504
           T   + +I+  + F+GY+  ++  YVDTGAG+CLA K +IP ELW +S   +  ++A++ 
Sbjct: 28  TSPNSIYIEGKLSFKGYKMINIHCYVDTGAGLCLASKYIIPEELWENSPNTIQVTVANQE 87

Query: 503 RIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFIQYDKIVGWGHPV 330
           ++YL     ++ I I G  F + T+++ + G D+LIGN F   Y PFIQ++  + +    
Sbjct: 88  KVYLTKVCKNLNIYIAGEKFTIPTIYQQETGIDILIGNNFCRLYNPFIQWEDRIAFHLEQ 147

Query: 329 SNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAERGETI-------GNNLKFDFNQLVK 171
               ++  +  KA       FL  ++K   NT    G  I        +N   D ++  +
Sbjct: 148 GTKQILVPKQRKAIKRGYQGFLETMKKE-SNTQPLPGTNITKEAVEDESNFIIDISRYQE 206

Query: 170 IRNLVKVI 147
           I+NL+K +
Sbjct: 207 IQNLLKKV 214


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
 Frame = -3

Query: 683 TPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSSAKPLVASIADKT 504
           T   + +I+  + F+GY+  ++  YVDTGAG+CLA K +IP ELW +S   +  ++A++ 
Sbjct: 28  TSPNSIYIEGKLSFKGYKMINIHCYVDTGAGLCLASKYIIPEELWENSPNTIQVTVANQE 87

Query: 503 RIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFIQYDKIVGWGHPV 330
           ++YL     ++ I I G  F + T+++ + G D+LIGN F   Y PFIQ++  + +    
Sbjct: 88  KVYLTKVCKNLNIYIAGEKFTIPTIYQQETGIDILIGNNFCRLYNPFIQWEDRIAFHLEQ 147

Query: 329 SNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAERGETI-------GNNLKFDFNQLVK 171
               ++  +  KA       FL  ++K   NT    G  I        +N   D ++  +
Sbjct: 148 GTKQILVPKQRKAIKRGYQGFLETMKKE-SNTQPLPGTNITKEAVEDESNFIIDISRYQE 206

Query: 170 IRNLVKVI 147
           I+NL++ +
Sbjct: 207 IQNLLEKV 214


>emb|CAD56758.1| putative reverse transcriptase [Dahlia mosaic virus]
          Length = 337

 Score = 92.8 bits (229), Expect = 3e-16
 Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
 Frame = -3

Query: 683 TPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSSAKPLVASIADKT 504
           T   + +I+  + F+GY+  ++  YVDTGAG+CLA K +IP ELW +S   +  ++A++ 
Sbjct: 28  TSPNSIYIEGKLSFKGYKMINIHCYVDTGAGLCLASKYIIPEELWENSPNTIQVTVANQE 87

Query: 503 RIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFIQYDKIVGWGHPV 330
           ++YL     ++ I I G  F + T+++ + G D+LIGN F   Y PFIQ++  + +    
Sbjct: 88  KVYLTKVCKNLNIYIAGEKFTIPTIYQQETGIDILIGNNFCRLYNPFIQWEDRIAFHLEQ 147

Query: 329 SNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAERGETI-------GNNLKFDFNQLVK 171
               ++  +  KA       FL  ++K   NT    G  I        +N   D ++  +
Sbjct: 148 GTKQILVPKQRKAIKRGYQGFLETMKKE-SNTQPLPGTNITKEAVEDESNFIIDISRYQE 206

Query: 170 IRNLVKVI 147
           I+NL++ +
Sbjct: 207 IQNLLEKV 214


>dbj|BAO53386.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 678

 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIVGWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++   +      V  A+L KA  I  + FL++++K  K    E
Sbjct: 127 QFTDRVIFTKN--KTYPVHIAKLTKAVRIGTEGFLDSMKKRSKTQQPE 172


>dbj|BAO53393.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|591288586|dbj|BAO53400.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 678

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 56/168 (33%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPILVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIVGWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++   +      V  A+L KA  +  + FL++++K  K    E
Sbjct: 127 QFTDRVIFTKN--KTYPVHIAKLTKAVRVGTEGFLDSMKKRSKTQQPE 172


>dbj|BAO53372.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A+L +A  +  + FL +++K  K    E
Sbjct: 127 QFTDRVIFTKNKSYPVH-----IAKLTRAMRVGTEGFLESMKKRSKTQQPE 172


>dbj|BAO53365.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNITNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A+L +A  +  + FL +++K  K    E
Sbjct: 127 QFTDRVIFTKNKSYPVH-----IAKLTRAMRVGTEGFLESMKKRSKTQQPE 172


>dbj|BAO53379.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|591288602|dbj|BAO53414.1| reverse transcriptase
           [Cauliflower mosaic virus]
          Length = 679

 Score = 91.3 bits (225), Expect = 7e-16
 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A+L +A  +  + FL +++K  K    E
Sbjct: 127 QFTDRVIFTKNKSYPVH-----IAKLTRAVRVGTEGFLESMKKRSKTQQPE 172


>gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 91.3 bits (225), Expect = 7e-16
 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A+L +A  +  + FL +++K  K    E
Sbjct: 127 QFTDRVIFTKNKSYPVH-----IAKLTRAVRVGTEGFLESMKKRSKTQQPE 172


>emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]
          Length = 680

 Score = 91.3 bits (225), Expect = 7e-16
 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 8   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 67

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 68  ERPILVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 127

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A+L +A  +  + FL +++K  K    E
Sbjct: 128 QFTDRVIFTKNKSYPVH-----IAKLTRAVRVGTEGFLESMKKRSKTQQPE 173


>dbj|BAO53407.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A++ +A  +  + FL +++K  K    E
Sbjct: 127 QFTDRVIFTKNKSYPVH-----IAKITRAVRVGTEGFLESMKKRSKTQQPE 172


>sp|Q00962.1|POL_CAMVN RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|331571|gb|AAA46358.1| reverse
           transcriptase [Cauliflower mosaic virus]
           gi|445598|prf||1909346E reverse transcriptase
          Length = 680

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 8   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 67

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 68  ERPIMVKIADGSSITISKVCKDIDLIIVGVIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 127

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A+L +A  +  + FL +++K  K    E
Sbjct: 128 QFTDRVIFTKNKSYPVH-----IAKLTRAVRVGTEGFLESMKKRSKTQQPE 173


>dbj|BAO53421.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 679

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A+L +A  +  + FL  ++K  K    E
Sbjct: 127 QFTDRVIFTKNKSYPVH-----IAKLTRAVRVGTEGFLEAMKKRSKTQQPE 172


>sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
          Length = 679

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  ++E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQIEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV        +L +A  +  + FL +++K  K    E
Sbjct: 127 QFTDRVIFTKNKSYPVH-----ITKLTRAVRVGIEGFLESMKKRSKTQQPE 172


>ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus]
           gi|130592|sp|P03554.1|POL_CAMVS RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58826|emb|CAA23460.1|
           unnamed protein product [Cauliflower mosaic virus]
          Length = 679

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 7   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 66

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  F++ TV++ + G D +IGN F   Y+PFI
Sbjct: 67  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFRIPTVYQQESGIDFIIGNNFCQLYEPFI 126

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A+L +A  +  + FL +++K  K    E
Sbjct: 127 QFTDRVIFTKNKSYPVH-----IAKLTRAVRVGTEGFLESMKKRSKTQQPE 172


>emb|CAH68829.1| polyprotein [Carnation etched ring virus]
          Length = 656

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
 Frame = -3

Query: 683 TPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSSAKPLVASIADKT 504
           T   + ++K  +KF GY++  L  YVDTG+ +C+A K VIP E W ++ KPL   IA+  
Sbjct: 7   TNPNSIYVKGILKFPGYKQLELHCYVDTGSSLCMASKYVIPEEYWQTAEKPLNIKIANGK 66

Query: 503 RIYLVNY-ADITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFIQY-DKIVGWGHP 333
            I L    + + I++GG  F + T+++ + G DLL+GN F   Y PFIQY D+I      
Sbjct: 67  IIQLTKVCSKLPIRLGGERFLIPTLFQQESGIDLLLGNNFCQLYSPFIQYTDRIY---FH 123

Query: 332 VSNCLVIAARLPKAQVIKDDFFLNNLRKPIK 240
           ++   VI  ++ KA       FL +++K  K
Sbjct: 124 LNKQSVIIGKITKAYQYGVKGFLESMKKKYK 154


>emb|CAD79320.2| polyprotein [Carnation etched ring virus]
          Length = 215

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
 Frame = -3

Query: 683 TPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSSAKPLVASIADKT 504
           T   + ++K  +KF GY++  L  YVDTG+ +C+A K VIP E W ++ KPL   IA+  
Sbjct: 7   TNPNSIYVKGILKFPGYKQLELHCYVDTGSSLCMASKYVIPEEYWQTAEKPLNIKIANGK 66

Query: 503 RIYLVNY-ADITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFIQY-DKIVGWGHP 333
            I L    + + I++GG  F + T+++ + G DLL+GN F   Y PFIQY D+I      
Sbjct: 67  IIQLTKVCSKLPIRLGGERFLIPTLFQQESGIDLLLGNNFCQLYSPFIQYTDRIY---FH 123

Query: 332 VSNCLVIAARLPKAQVIKDDFFLNNLRKPIK 240
           ++   VI  ++ KA       FL +++K  K
Sbjct: 124 LNKQSVIIGKITKAYQYGVKGFLESMKKKYK 154


>gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 680

 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
 Frame = -3

Query: 719 ESTVKVERTKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKTVIPTELWTSS 540
           ++  + E+    T   + +IK  + F+GY++  L  +VDTGA +C+A K VIP E W ++
Sbjct: 8   KTQTQTEQVMNVTNPNSIYIKGRLYFKGYKKIELHCFVDTGASLCIASKFVIPEEHWVNA 67

Query: 539 AKPLVASIADKTRIYLVNYA-DITIKIGGYPFKM-TVWEADCGFDLLIGNRFNLKYQPFI 366
            +P++  IAD + I +     DI + I G  FK+ TV++ + G D +IGN F   Y+PFI
Sbjct: 68  ERPIMVKIADGSSITISKVCKDIDLIIAGEIFKIPTVYQQESGIDFIIGNNFCQLYEPFI 127

Query: 365 QY-DKIV---GWGHPVSNCLVIAARLPKAQVIKDDFFLNNLRKPIKNTYAE 225
           Q+ D+++      +PV       A + +A  +  + FL +++K  K    E
Sbjct: 128 QFTDRVIFAKNKSYPVH-----IANVTRAVRVGTEGFLESMKKRSKTQQPE 173


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
 Frame = -3

Query: 743 DWTLLGHEESTVKVER--TKLHTPATATFIKVAMKFEGYEEYSLDAYVDTGAGMCLAKKT 570
           D+ L   +ES    ER  T   T   + +IK    F+GY++YSLD YVDTGA MC A K 
Sbjct: 24  DFNLQQEDESVESEERFSTLTKTNPNSIYIKGNFYFKGYKKYSLDLYVDTGASMCTANKH 83

Query: 569 VIPTELWTSSAKPLVASIADKTRIYLVNYAD-ITIKIGGYPFKM-TVWEADCGFDLLIGN 396
           VIP E W ++  P+ A IA+ + I     A+ + ++I    F + T+++A    D+ IGN
Sbjct: 84  VIPEEFWVNAKNPIKARIANDSIITFNKVAELVQVQIADETFIIPTMYQATTKGDITIGN 143

Query: 395 RFNLKYQPFIQYDKIV 348
            F   Y+PF+QY  ++
Sbjct: 144 NFCRLYEPFVQYKDMI 159