BLASTX nr result
ID: Paeonia22_contig00002269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00002269
(307 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFU95606.1| RpoB, partial (chloroplast) [Medusagyne oppositif... 61 3e-10
ref|YP_004072454.1| RNA polymerase beta subunit [Corynocarpus la... 62 3e-10
gb|AFU95579.1| RpoB, partial (chloroplast) [Averrhoa carambola] 61 5e-10
gb|AFU95608.1| RpoB, partial (chloroplast) [Ouratea sp. CCD-2012] 61 5e-10
gb|AFU95616.1| RpoB, partial (chloroplast) [Quiina glaziovii] 60 9e-10
gb|AFU95600.1| RpoB, partial (chloroplast) [Hypericum perforatum] 60 1e-09
gb|AFU95598.1| RpoB, partial (chloroplast) [Hypericum fraseri] 60 1e-09
ref|XP_003606033.1| DNA-directed RNA polymerase [Medicago trunca... 59 2e-09
gb|AGV52605.1| RNA polymerase beta subunit (chloroplast) [Medica... 59 2e-09
gb|AFR60051.1| RNA polymerase beta subunit [Medicago truncatula] 59 2e-09
ref|YP_001381728.1| RNA polymerase beta subunit [Medicago trunca... 59 2e-09
gb|AFU95583.1| RpoB, partial (chloroplast) [Byrsonima crassifolia] 59 3e-09
ref|YP_001123022.1| RNA polymerase beta subunit [Aethionema gran... 59 3e-09
ref|YP_001122938.1| RNA polymerase beta subunit [Aethionema cord... 59 3e-09
gb|AGS43972.1| RNA polymerase beta subunit [Vicia faba] 59 3e-09
ref|YP_003587568.1| RNA polymerase beta subunit [Pisum sativum] ... 59 3e-09
gb|AGO63791.1| RNA polymerase beta subunit [Trifolium aureum] 59 3e-09
gb|AGO63715.1| RNA polymerase beta subunit [Trifolium grandiflorum] 59 3e-09
gb|AHE41624.1| RNA polymerase beta subunit protein, partial (chl... 59 3e-09
ref|XP_004516189.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 58 3e-09
>gb|AFU95606.1| RpoB, partial (chloroplast) [Medusagyne oppositifolia]
Length = 1108
Score = 60.8 bits (146), Expect(2) = 3e-10
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A GG
Sbjct: 558 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIAERGG 602
Score = 29.3 bits (64), Expect(2) = 3e-10
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 537 PFQYFSIGASLITFI 551
>ref|YP_004072454.1| RNA polymerase beta subunit [Corynocarpus laevigata]
gi|309252882|gb|ADO60302.1| RNA polymerase beta subunit
[Corynocarpus laevigata]
Length = 1070
Score = 61.6 bits (148), Expect(2) = 3e-10
Identities = 35/46 (76%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPALA GG
Sbjct: 541 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPALAEHGG 585
Score = 28.5 bits (62), Expect(2) = 3e-10
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 520 PFQYFSIGASLIPFI 534
>gb|AFU95579.1| RpoB, partial (chloroplast) [Averrhoa carambola]
Length = 862
Score = 60.8 bits (146), Expect(2) = 5e-10
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A GG
Sbjct: 312 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIAEHGG 356
Score = 28.5 bits (62), Expect(2) = 5e-10
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 291 PFQYFSIGASLIPFI 305
>gb|AFU95608.1| RpoB, partial (chloroplast) [Ouratea sp. CCD-2012]
Length = 607
Score = 60.8 bits (146), Expect(2) = 5e-10
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A GG
Sbjct: 57 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIAERGG 101
Score = 28.5 bits (62), Expect(2) = 5e-10
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 36 PFQYFSIGASLIPFI 50
>gb|AFU95616.1| RpoB, partial (chloroplast) [Quiina glaziovii]
Length = 1108
Score = 60.1 bits (144), Expect(2) = 9e-10
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A GG
Sbjct: 558 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIAEGGG 602
Score = 28.5 bits (62), Expect(2) = 9e-10
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 537 PFQYFSIGASLIPFI 551
>gb|AFU95600.1| RpoB, partial (chloroplast) [Hypericum perforatum]
Length = 1016
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + G
Sbjct: 466 RALMSSNMQRQA-VALSRSEKCIVGTGLERQVALDSGVPAIANQEG 510
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 445 PFQYFSIGASLIPFI 459
>gb|AFU95598.1| RpoB, partial (chloroplast) [Hypericum fraseri]
Length = 780
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + G
Sbjct: 230 RALMSSNMQRQA-VALSRSEKCIVGTGLERQVALDSGVPAIANQEG 274
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 209 PFQYFSIGASLIPFI 223
>ref|XP_003606033.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355507088|gb|AES88230.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1748
Score = 58.9 bits (141), Expect(2) = 2e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 528 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHAGKIVYN 577
Score = 28.5 bits (62), Expect(2) = 2e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 507 PFQYFSIGASLIPFI 521
>gb|AGV52605.1| RNA polymerase beta subunit (chloroplast) [Medicago truncatula f.
tricycla]
Length = 1070
Score = 58.9 bits (141), Expect(2) = 2e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 541 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHAGKIVYN 590
Score = 28.5 bits (62), Expect(2) = 2e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 520 PFQYFSIGASLIPFI 534
>gb|AFR60051.1| RNA polymerase beta subunit [Medicago truncatula]
Length = 1070
Score = 58.9 bits (141), Expect(2) = 2e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 541 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHAGKIVYN 590
Score = 28.5 bits (62), Expect(2) = 2e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 520 PFQYFSIGASLIPFI 534
>ref|YP_001381728.1| RNA polymerase beta subunit [Medicago truncatula]
gi|404332343|gb|AFR59975.1| RNA polymerase beta subunit
[Medicago truncatula] gi|404332497|gb|AFR60127.1| RNA
polymerase beta subunit [Medicago truncatula]
Length = 1070
Score = 58.9 bits (141), Expect(2) = 2e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 541 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHAGKIVYN 590
Score = 28.5 bits (62), Expect(2) = 2e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 520 PFQYFSIGASLIPFI 534
>gb|AFU95583.1| RpoB, partial (chloroplast) [Byrsonima crassifolia]
Length = 1108
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + L RSEKCIVGT LERQVALDSGVPA+A GG
Sbjct: 558 RALMSSNMQRQA-VPLFRSEKCIVGTGLERQVALDSGVPAIAEHGG 602
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 537 PFQYFSIGASLIPFI 551
>ref|YP_001123022.1| RNA polymerase beta subunit [Aethionema grandiflorum]
gi|158513606|sp|A4QJJ1.1|RPOB_AETGR RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|134286218|dbj|BAF49846.1| RNA polymerase beta subunit
[Aethionema grandiflorum]
Length = 1073
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + G
Sbjct: 543 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIAEQEG 587
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 522 PFQYFSIGASLIPFI 536
>ref|YP_001122938.1| RNA polymerase beta subunit [Aethionema cordifolium]
gi|158513599|sp|A4QJA7.1|RPOB_AETCO RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|134286133|dbj|BAF49762.1| RNA polymerase beta subunit
[Aethionema cordifolium]
Length = 1073
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGG 186
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + G
Sbjct: 543 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIAEQEG 587
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 522 PFQYFSIGASLIPFI 536
>gb|AGS43972.1| RNA polymerase beta subunit [Vicia faba]
Length = 1070
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 541 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHEGKIVYN 590
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 520 PFQYFSIGASLIPFI 534
>ref|YP_003587568.1| RNA polymerase beta subunit [Pisum sativum]
gi|293338593|gb|ADE43566.1| RNA polymerase beta subunit
(chloroplast) [Pisum sativum]
Length = 1070
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 541 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHEGKIVYN 590
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 520 PFQYFSIGASLIPFI 534
>gb|AGO63791.1| RNA polymerase beta subunit [Trifolium aureum]
Length = 1067
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 541 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHEGKIVYN 590
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 520 PFQYFSIGASLIPFI 534
>gb|AGO63715.1| RNA polymerase beta subunit [Trifolium grandiflorum]
Length = 1067
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 541 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHEGKIVYN 590
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 520 PFQYFSIGASLIPFI 534
>gb|AHE41624.1| RNA polymerase beta subunit protein, partial (chloroplast)
[Exbucklandia populnea]
Length = 788
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALA 174
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPALA
Sbjct: 522 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPALA 562
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 501 PFQYFSIGASLIPFI 515
>ref|XP_004516189.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit
beta-like [Cicer arietinum]
Length = 1747
Score = 58.2 bits (139), Expect(2) = 3e-09
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +1
Query: 49 QALMSSNMHYATPILLSRSEKCIVGTCLERQVALDSGVPALACEGGIRVQQFGKIKHN 222
+ALMSSNM + LSRSEKCIVGT LERQVALDSGVPA+A + GKI +N
Sbjct: 528 RALMSSNMQRQA-VPLSRSEKCIVGTGLERQVALDSGVPAIA-------EHEGKIIYN 577
Score = 28.5 bits (62), Expect(2) = 3e-09
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 3 PFQYLSIGASLILFI 47
PFQY SIGASLI FI
Sbjct: 507 PFQYFSIGASLIPFI 521