BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00001143
         (296 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_734013.1| protease cofactor [Cycas necrotic stunt virus]        92   6e-17
ref|NP_620619.1| polyprotien 1 [Cycas necrotic stunt virus] gi|5...    92   6e-17

>ref|NP_734013.1| protease cofactor [Cycas necrotic stunt virus]
          Length = 559

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 49/98 (50%), Positives = 55/98 (56%)
 Frame = +3

Query: 3   LLPHVXXXXXXXXXXXXRTLREQLFPSGNGGTDTTXXXXXXXXXXXXXXQLKAYRDVCAK 182
           L+P +            R LREQLFPSGNGGTDTT              QLKAY+DVCAK
Sbjct: 214 LIPLIEKLRARLLQDEARELREQLFPSGNGGTDTTKVAAASKAEIKAAAQLKAYQDVCAK 273

Query: 183 VWXXXXXXXXXXXXXMVEDLITSANCGRQDVPEPATKK 296
           VW             +VEDLITSANCG+QDV EPA +K
Sbjct: 274 VWRVKRQEKKAQQAKLVEDLITSANCGKQDVSEPAIEK 311


>ref|NP_620619.1| polyprotien 1 [Cycas necrotic stunt virus]
           gi|50400776|sp|Q8QVV0.1|POL1_CNSV RecName: Full=RNA1
           polyprotein; AltName: Full=P1; Contains: RecName:
           Full=P1A protein; Short=1A; AltName: Full=Protease
           cofactor; Contains: RecName: Full=Putative ATP-dependent
           helicase; AltName: Full=1B; AltName:
           Full=Membrane-binding protein; AltName: Full=NTP-binding
           protein; Short=NTB; Contains: RecName: Full=Viral
           genome-linked protein; AltName: Full=1C-VPg; Contains:
           RecName: Full=Picornain 3C-like protease; Short=3C-like
           protease; AltName: Full=1D-PRO; Contains: RecName:
           Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
           gi|20160382|dbj|BAB89369.1| polyprotien 1 [Cycas
           necrotic stunt virus]
          Length = 2336

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 49/98 (50%), Positives = 55/98 (56%)
 Frame = +3

Query: 3   LLPHVXXXXXXXXXXXXRTLREQLFPSGNGGTDTTXXXXXXXXXXXXXXQLKAYRDVCAK 182
           L+P +            R LREQLFPSGNGGTDTT              QLKAY+DVCAK
Sbjct: 214 LIPLIEKLRARLLQDEARELREQLFPSGNGGTDTTKVAAASKAEIKAAAQLKAYQDVCAK 273

Query: 183 VWXXXXXXXXXXXXXMVEDLITSANCGRQDVPEPATKK 296
           VW             +VEDLITSANCG+QDV EPA +K
Sbjct: 274 VWRVKRQEKKAQQAKLVEDLITSANCGKQDVSEPAIEK 311