BLASTX nr result
ID: Paeonia22_contig00001142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia22_contig00001142
(672 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_734013.1| protease cofactor [Cycas necrotic stunt virus] 92 2e-16
ref|NP_620619.1| polyprotien 1 [Cycas necrotic stunt virus] gi|5... 92 2e-16
ref|YP_006576510.1| polyprotein p1 [Grapevine Anatolian ringspot... 74 6e-11
ref|NP_734031.1| protease cofactor [Beet ringspot virus] 71 3e-10
prf||1507292A polyprotein 71 3e-10
sp|P18522.1|POL1_BRSV RecName: Full=RNA1 polyprotein; AltName: F... 71 3e-10
ref|NP_620112.1| polyprotein [Beet ringspot virus] gi|538251|dbj... 71 3e-10
ref|NP_958837.1| NTB [Tomato black ring virus] 66 9e-09
ref|NP_958814.1| polyprotein [Tomato black ring virus] gi|513164... 66 9e-09
ref|NP_619705.1| polyprotein [Grapevine chrome mosaic virus] gi|... 59 1e-06
ref|NP_734047.1| protease cofactor [Grapevine chrome mosaic virus] 59 1e-06
>ref|NP_734013.1| protease cofactor [Cycas necrotic stunt virus]
Length = 559
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/81 (58%), Positives = 50/81 (61%)
Frame = +1
Query: 430 RTLREQLFPSGNGGTDTTXXXXXXXXXXXXXXQLKAYQDVCAKVWXXXXXXXXXXXXXMV 609
R LREQLFPSGNGGTDTT QLKAYQDVCAKVW +V
Sbjct: 231 RELREQLFPSGNGGTDTTKVAAASKAEIKAAAQLKAYQDVCAKVWRVKRQEKKAQQAKLV 290
Query: 610 EDLITSANCGRQDAPEPATKK 672
EDLITSANCG+QD EPA +K
Sbjct: 291 EDLITSANCGKQDVSEPAIEK 311
>ref|NP_620619.1| polyprotien 1 [Cycas necrotic stunt virus]
gi|50400776|sp|Q8QVV0.1|POL1_CNSV RecName: Full=RNA1
polyprotein; AltName: Full=P1; Contains: RecName:
Full=P1A protein; Short=1A; AltName: Full=Protease
cofactor; Contains: RecName: Full=Putative ATP-dependent
helicase; AltName: Full=1B; AltName:
Full=Membrane-binding protein; AltName: Full=NTP-binding
protein; Short=NTB; Contains: RecName: Full=Viral
genome-linked protein; AltName: Full=1C-VPg; Contains:
RecName: Full=Picornain 3C-like protease; Short=3C-like
protease; AltName: Full=1D-PRO; Contains: RecName:
Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
gi|20160382|dbj|BAB89369.1| polyprotien 1 [Cycas
necrotic stunt virus]
Length = 2336
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/81 (58%), Positives = 50/81 (61%)
Frame = +1
Query: 430 RTLREQLFPSGNGGTDTTXXXXXXXXXXXXXXQLKAYQDVCAKVWXXXXXXXXXXXXXMV 609
R LREQLFPSGNGGTDTT QLKAYQDVCAKVW +V
Sbjct: 231 RELREQLFPSGNGGTDTTKVAAASKAEIKAAAQLKAYQDVCAKVWRVKRQEKKAQQAKLV 290
Query: 610 EDLITSANCGRQDAPEPATKK 672
EDLITSANCG+QD EPA +K
Sbjct: 291 EDLITSANCGKQDVSEPAIEK 311
>ref|YP_006576510.1| polyprotein p1 [Grapevine Anatolian ringspot virus]
gi|400131550|emb|CCG47847.1| polyprotein p1 [Grapevine
Anatolian ringspot virus]
Length = 2243
Score = 73.6 bits (179), Expect = 6e-11
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Frame = +1
Query: 37 PIGLS-ETIFSFSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
P+ LS + + FS ++ +LRINP+ +WEETLANWP FPGTSLLD CRTQY+V
Sbjct: 63 PVSLSSQFVEDFSVLILDKLRINPFLHIWEETLANWPIFPGTSLLDFCRTQYEV 116
>ref|NP_734031.1| protease cofactor [Beet ringspot virus]
Length = 565
Score = 71.2 bits (173), Expect = 3e-10
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +1
Query: 67 FSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
F + EL+INP+++LWEETLANWP +PGTSLLD CRTQY++
Sbjct: 83 FCELALDELKINPFHQLWEETLANWPVYPGTSLLDFCRTQYEI 125
>prf||1507292A polyprotein
Length = 2264
Score = 71.2 bits (173), Expect = 3e-10
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +1
Query: 67 FSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
F + EL+INP+++LWEETLANWP +PGTSLLD CRTQY++
Sbjct: 83 FCELALDELKINPFHQLWEETLANWPVYPGTSLLDFCRTQYEI 125
>sp|P18522.1|POL1_BRSV RecName: Full=RNA1 polyprotein; AltName: Full=P1; Contains:
RecName: Full=P1A protein; Short=1A; AltName:
Full=Protease cofactor; Contains: RecName: Full=Putative
ATP-dependent helicase; AltName: Full=1B; AltName:
Full=Membrane-binding protein; AltName: Full=NTP-binding
protein; Short=NTB; Contains: RecName: Full=Viral
genome-linked protein; AltName: Full=1C-VPg; Contains:
RecName: Full=Picornain 3C-like protease; Short=3C-like
protease; AltName: Full=1D-PRO; Contains: RecName:
Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
Length = 2264
Score = 71.2 bits (173), Expect = 3e-10
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +1
Query: 67 FSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
F + EL+INP+++LWEETLANWP +PGTSLLD CRTQY++
Sbjct: 83 FCELALDELKINPFHQLWEETLANWPVYPGTSLLDFCRTQYEI 125
>ref|NP_620112.1| polyprotein [Beet ringspot virus] gi|538251|dbj|BAA00234.1|
polyprotein [Beet ringspot virus]
Length = 2266
Score = 71.2 bits (173), Expect = 3e-10
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +1
Query: 67 FSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
F + EL+INP+++LWEETLANWP +PGTSLLD CRTQY++
Sbjct: 83 FCELALDELKINPFHQLWEETLANWPVYPGTSLLDFCRTQYEI 125
>ref|NP_958837.1| NTB [Tomato black ring virus]
Length = 1205
Score = 66.2 bits (160), Expect = 9e-09
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Frame = +1
Query: 37 PIGLSET----IFSFSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
P+ +SE + F + +L+INP+++LWEETLANWP +PGTSLLD RTQY++
Sbjct: 69 PMSVSEAASLALEDFCELALDKLKINPFHQLWEETLANWPVYPGTSLLDFFRTQYEI 125
>ref|NP_958814.1| polyprotein [Tomato black ring virus]
gi|51316452|sp|Q8B8X3.1|POL1_TBRVM RecName: Full=RNA1
polyprotein; AltName: Full=P1; Contains: RecName:
Full=P1A protein; Short=1A; AltName: Full=protease
cofactor; Contains: RecName: Full=Putative ATP-dependent
helicase; AltName: Full=1B; AltName: Full=NTP-binding
protein; Short=NTB; AltName: Full=membrane-binding
protein; Contains: RecName: Full=Viral genome-linked
protein; AltName: Full=1C-VPg; Contains: RecName:
Full=Picornain 3C-like protease; Short=3C-like protease;
AltName: Full=1D-PRO; Contains: RecName:
Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
gi|25247332|gb|AAN72830.1| polyprotein [Tomato black
ring virus]
Length = 2266
Score = 66.2 bits (160), Expect = 9e-09
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Frame = +1
Query: 37 PIGLSET----IFSFSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
P+ +SE + F + +L+INP+++LWEETLANWP +PGTSLLD RTQY++
Sbjct: 69 PMSVSEAASLALEDFCELALDKLKINPFHQLWEETLANWPVYPGTSLLDFFRTQYEI 125
>ref|NP_619705.1| polyprotein [Grapevine chrome mosaic virus]
gi|130391|sp|P13025.1|POL1_GCMV RecName: Full=RNA1
polyprotein; AltName: Full=P1; Contains: RecName:
Full=P1A protein; Short=1A; AltName: Full=Protease
cofactor; Contains: RecName: Full=Putative ATP-dependent
helicase; AltName: Full=1B; AltName:
Full=Membrane-binding protein; AltName: Full=NTP-binding
protein; Short=NTB; Contains: RecName: Full=Viral
genome-linked protein; AltName: Full=1C-VPg; Contains:
RecName: Full=Picornain 3C-like protease; Short=3C-like
protease; AltName: Full=1D-PRO; Contains: RecName:
Full=RNA-directed RNA polymerase; AltName: Full=1E-POL
gi|59346|emb|CAA33405.1| unnamed protein product
[Grapevine chrome mosaic virus]
Length = 2252
Score = 58.9 bits (141), Expect = 1e-06
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +1
Query: 58 IFSFSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
+F+F++F++ + +NP+ ++WEETLANWP F G SLL CCRT +V
Sbjct: 81 LFAFANFVL-DCGVNPFLQIWEETLANWPLFQGQSLLACCRTTAEV 125
>ref|NP_734047.1| protease cofactor [Grapevine chrome mosaic virus]
Length = 571
Score = 58.9 bits (141), Expect = 1e-06
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +1
Query: 58 IFSFSSFLIRELRINPYNELWEETLANWPTFPGTSLLDCCRTQYDV 195
+F+F++F++ + +NP+ ++WEETLANWP F G SLL CCRT +V
Sbjct: 81 LFAFANFVL-DCGVNPFLQIWEETLANWPLFQGQSLLACCRTTAEV 125