BLASTX nr result

ID: Paeonia22_contig00000706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00000706
         (221 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313773.2| RNA recognition motif-containing family prot...    58   2e-06
ref|XP_007199327.1| hypothetical protein PRUPE_ppa023654mg [Prun...    58   2e-06
ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, part...    58   2e-06
ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucu...    58   2e-06
gb|EXC17240.1| RNA-binding protein 28 [Morus notabilis]                57   3e-06

>ref|XP_002313773.2| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|550331582|gb|EEE87728.2| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 974

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 8/57 (14%)
 Frame = +3

Query: 9    TERRKRTKRN-EPIGRDMVDKLDTLIALYKSNFSKQT-------DGGFRQLKRWFQS 155
            +E+RKR K+N +P+G+D+ DKLD LI  YKS FSKQT           +QLKRWFQS
Sbjct: 918  SEKRKRPKKNKDPVGQDVADKLDMLIEQYKSKFSKQTADKPEGEKQANKQLKRWFQS 974


>ref|XP_007199327.1| hypothetical protein PRUPE_ppa023654mg [Prunus persica]
           gi|462394727|gb|EMJ00526.1| hypothetical protein
           PRUPE_ppa023654mg [Prunus persica]
          Length = 306

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 8/55 (14%)
 Frame = +3

Query: 15  RRKRTKRN-EPIGRDMVDKLDTLIALYKSNFSK----QTDG---GFRQLKRWFQS 155
           RRKR K+N +P+GRD+ DKLDTLI  Y+SN+S+    QTDG   G R L +WFQ+
Sbjct: 252 RRKRPKKNKDPLGRDVTDKLDTLIEQYRSNYSQRSSVQTDGEKQGSRNLSKWFQT 306


>ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, partial [Cucumis sativus]
          Length = 678

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 8/58 (13%)
 Frame = +3

Query: 6   DTERRKRTKRN-EPIGRDMVDKLDTLIALYKSNF----SKQTDG---GFRQLKRWFQS 155
           + ++RKR K+N EPIGRD+VDKLD LI  Y+S F    S +TDG   G +Q++RWFQS
Sbjct: 621 EQQQRKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLQQRSDRTDGEKKGTKQVRRWFQS 678


>ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
          Length = 966

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 8/58 (13%)
 Frame = +3

Query: 6    DTERRKRTKRN-EPIGRDMVDKLDTLIALYKSNF----SKQTDG---GFRQLKRWFQS 155
            + ++RKR K+N EPIGRD+VDKLD LI  Y+S F    S +TDG   G +Q++RWFQS
Sbjct: 909  EQQQRKRPKKNKEPIGRDIVDKLDVLIEQYQSKFLQQRSDRTDGEKKGTKQVRRWFQS 966


>gb|EXC17240.1| RNA-binding protein 28 [Morus notabilis]
          Length = 858

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 7/57 (12%)
 Frame = +3

Query: 6   DTERRKRTKRNEPIGRDMVDKLDTLIALYKSNFSK----QTDG---GFRQLKRWFQS 155
           +T R++  K  +P+GRD+VDKLD LI  YKS +S+    QTDG   G  QL++WFQS
Sbjct: 802 NTRRKRPNKNKDPLGRDVVDKLDMLIEQYKSKYSQKGSNQTDGERKGLGQLRKWFQS 858


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