BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00000583
         (2912 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...  1524   0.0  
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus...  1518   0.0  
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...  1516   0.0  
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not...  1515   0.0  
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i...  1514   0.0  
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su...  1514   0.0  
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun...  1514   0.0  
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...  1514   0.0  
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su...  1513   0.0  
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su...  1511   0.0  
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...  1511   0.0  
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas...  1510   0.0  
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas...  1510   0.0  
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...  1509   0.0  
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su...  1505   0.0  
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su...  1504   0.0  
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr...  1504   0.0  
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca...  1503   0.0  
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia...  1502   0.0  
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...  1499   0.0  

>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score = 1524 bits (3946), Expect = 0.0
 Identities = 761/821 (92%), Positives = 778/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 21   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 80

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 81   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 140

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 141  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 200

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 201  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYI 260

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 261  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQV 320

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 321  ALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 380

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 381  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 440

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 441  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 500

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 501  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 560

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHRDPDMLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 561  PAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 620

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIK+KDIQALQQRETP++GGWHDLVAKGFIEY+D       MISM
Sbjct: 621  GRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISM 680

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 681  TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 740

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 741  GIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 800

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 801  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 841


>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
          Length = 1197

 Score = 1518 bits (3929), Expect = 0.0
 Identities = 756/821 (92%), Positives = 777/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF
Sbjct: 26   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 85

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 86   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 145

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 146  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 205

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAE+QNRPPS+MF+RML+RTSAKGGSSGQYI
Sbjct: 206  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFIRMLARTSAKGGSSGQYI 265

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR+EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 266  RATLPYIRSEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFVIQNQQV 325

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVTR++RIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 326  ALDYIGKRGATVGVTRDRRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 385

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 386  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 445

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 446  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 505

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 506  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 565

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 566  PAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 625

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIKKKDIQALQQRE+PD+GGWHDLVAKGFIEY+D       MISM
Sbjct: 626  GRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGFIEYIDTEEEETTMISM 685

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLVSAR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 686  TINDLVSARINPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 745

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 746  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 805

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 806  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 846


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score = 1516 bits (3924), Expect = 0.0
 Identities = 758/821 (92%), Positives = 774/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 24   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 83

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 84   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 143

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 144  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 203

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 204  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYI 263

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV
Sbjct: 264  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 323

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 324  ALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 383

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVR YVQKCVDNGK+VNLQFAIK
Sbjct: 384  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIK 443

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 444  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 503

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 504  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 563

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHRDPDMLVKT       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 564  PAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 623

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIKKKDI ALQQRE+ +EGGWHDLVAKGFIEY+D       MISM
Sbjct: 624  GRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMISM 683

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TI+DLV AR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 684  TIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 743

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 744  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 803

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 844


>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 1193

 Score = 1515 bits (3922), Expect = 0.0
 Identities = 756/821 (92%), Positives = 774/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 22   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 81

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
             ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 82   VETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 141

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 142  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 201

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTS+KGGSSGQYI
Sbjct: 202  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYI 261

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV
Sbjct: 262  RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 321

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVG GE+CETKKAYYFGYIIHRLLLCA
Sbjct: 322  ALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETKKAYYFGYIIHRLLLCA 381

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 382  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 441

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 442  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 501

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 502  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 561

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHRDPDMLVKT       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 562  PAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 621

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIKK+DI+ALQQRETP+E GWHDLV+ GFIEY+D       MISM
Sbjct: 622  GRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDTEEEETTMISM 681

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 682  TINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 741

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 742  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 801

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQS+IDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 802  VIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 842


>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
            cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
            polymerase family protein isoform 1 [Theobroma cacao]
          Length = 1189

 Score = 1514 bits (3920), Expect = 0.0
 Identities = 756/821 (92%), Positives = 774/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 21   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 80

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 81   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 140

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 141  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 200

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 201  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYI 260

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV
Sbjct: 261  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 320

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVG++CETKKAYYFGYIIHRLLLCA
Sbjct: 321  ALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLCA 380

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVR YVQKCVDNGK+VNLQFAIK
Sbjct: 381  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIK 440

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 441  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 500

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 501  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 560

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVG+HR+PDMLV T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 561  PAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 620

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIKKKDI ALQQRE+P++GGWHDLVAKGFIEY+D       MISM
Sbjct: 621  GRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISM 680

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV AR+NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 681  TINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 740

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 741  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 800

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 801  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 841


>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
            arietinum]
          Length = 1194

 Score = 1514 bits (3920), Expect = 0.0
 Identities = 754/821 (91%), Positives = 776/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 24   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 83

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGET+TLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG
Sbjct: 84   AETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 143

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 144  EEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVLI 203

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTS+KGGSSGQYI
Sbjct: 204  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYI 263

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV
Sbjct: 264  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 323

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVT+EKRIKYA++ILQ+EMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 324  ALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 383

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 384  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 443

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 444  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 503

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 504  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 563

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCW+GIHRDPDMLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 564  PAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDY 623

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIV+KQRLLIKKKDI +LQQRE+P+EGGWHDLV+KGFIEY+D       MISM
Sbjct: 624  GRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISM 683

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 684  TINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 743

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 744  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 803

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 844


>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
            gi|462410424|gb|EMJ15758.1| hypothetical protein
            PRUPE_ppa000425mg [Prunus persica]
          Length = 1192

 Score = 1514 bits (3919), Expect = 0.0
 Identities = 753/821 (91%), Positives = 774/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF
Sbjct: 21   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 80

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AET Y+I FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSK ++KKGHDG
Sbjct: 81   AETTYRIKFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKSIVKKGHDG 140

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 141  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 200

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRML+RTS+KGGSSGQYI
Sbjct: 201  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLARTSSKGGSSGQYI 260

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV
Sbjct: 261  RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 320

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGV+REKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLCA
Sbjct: 321  ALDYIGKRGATVGVSREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLCA 380

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGKE+NLQFAIK
Sbjct: 381  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKELNLQFAIK 440

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 441  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 500

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 501  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 560

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHRDP+MLVKT       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 561  PAVIPQATKIFVNGCWVGIHRDPEMLVKTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDY 620

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIV+KQRLLIKKKDI ALQQRE P++GGWHDLVAKGFIEY+D       MISM
Sbjct: 621  GRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGFIEYIDTEEEETTMISM 680

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 681  TINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 740

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 741  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 800

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 801  VIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDR 841


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score = 1514 bits (3919), Expect = 0.0
 Identities = 757/821 (92%), Positives = 774/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D 
Sbjct: 29   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDV 88

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG
Sbjct: 89   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 148

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 149  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 208

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 209  AQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYI 268

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV
Sbjct: 269  RATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 328

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRGSTVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIHRLLLCA
Sbjct: 329  ALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLCA 388

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 389  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 448

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 449  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 508

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 509  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 568

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHRDP+MLVKT       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 569  PAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 628

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIKKKDI ALQQRE+P++GGWHDLVAKGFIEY+D       MISM
Sbjct: 629  GRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISM 688

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TI+DL+ AR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 689  TISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 748

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 749  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 808

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 809  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 849


>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
            tuberosum]
          Length = 1191

 Score = 1513 bits (3917), Expect = 0.0
 Identities = 757/821 (92%), Positives = 773/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 21   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 80

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 81   AETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 140

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVLI
Sbjct: 141  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLI 200

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 201  AQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYI 260

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 261  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQV 320

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 321  ALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 380

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 381  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 440

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 441  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 500

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 501  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 560

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNG WVGIHRDPDMLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 561  PAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 620

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRL+IKKKDIQ LQQRE+PDEGGWHDLVAKG+IEY+D       MISM
Sbjct: 621  GRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMISM 680

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARLNP +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 681  TINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 740

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 741  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 800

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 801  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 841


>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria
            vesca subsp. vesca]
          Length = 1191

 Score = 1511 bits (3913), Expect = 0.0
 Identities = 752/821 (91%), Positives = 774/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE+ADIEIRPESQHNPGHQPDF
Sbjct: 21   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDEAADIEIRPESQHNPGHQPDF 80

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG
Sbjct: 81   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 140

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 141  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 200

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+VGEVRSMAESQNRPPS+MFVRMLSRTS+KGGSSGQYI
Sbjct: 201  AQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYI 260

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 261  RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQV 320

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+T GV R+KRI+YAR+ILQKEMLPHVG GE+CETKKAYYFGYIIHRLLLCA
Sbjct: 321  ALDYIGKRGATAGVPRDKRIRYARDILQKEMLPHVGTGEFCETKKAYYFGYIIHRLLLCA 380

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFR LFRKLT+DV+GYVQKCVDNGK+VNLQFAIK
Sbjct: 381  LGRRAEDDRDHYGNKRLDLAGPLLGSLFRSLFRKLTKDVKGYVQKCVDNGKDVNLQFAIK 440

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 441  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 500

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 501  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 560

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHRDP+MLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 561  PAVIPQATKIFVNGCWVGIHRDPEMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDY 620

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIV+KQRLLIKKKDI ALQQRE P++GGWHDLVAKGFIEY+D       MISM
Sbjct: 621  GRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGFIEYIDTEEEETTMISM 680

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 681  TINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 740

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 741  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 800

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 801  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 841


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
            gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
            Full=DNA-directed RNA polymerase II subunit RPB2;
            Short=RNA polymerase II subunit 2; Short=RNA polymerase
            II subunit B2; AltName: Full=DNA-directed RNA polymerase
            II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
            polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score = 1511 bits (3911), Expect = 0.0
 Identities = 755/821 (91%), Positives = 773/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 21   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 80

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 81   AETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 140

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVLI
Sbjct: 141  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLI 200

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYAFV EVRSMA++QNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 201  AQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQYI 260

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 261  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQV 320

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 321  ALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 380

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 381  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 440

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 441  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 500

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 501  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 560

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNG WVGIHRDPDMLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 561  PAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 620

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRL+IKKKDIQ LQQRE+PDEGGWHDLVAKG+IEY+D       MISM
Sbjct: 621  GRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMISM 680

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARLNP +AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 681  TINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 740

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 741  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 800

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 801  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 841


>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
            gi|561021391|gb|ESW20162.1| hypothetical protein
            PHAVU_006G185800g [Phaseolus vulgaris]
          Length = 1194

 Score = 1510 bits (3910), Expect = 0.0
 Identities = 753/821 (91%), Positives = 775/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 24   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 83

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIY+ISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG
Sbjct: 84   AETIYRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 143

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 144  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 203

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTS+KGGSSGQYI
Sbjct: 204  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYI 263

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV
Sbjct: 264  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 323

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 324  ALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 383

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 384  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 443

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLAK
Sbjct: 444  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAK 503

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 504  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 563

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNG W+GIHRDPDMLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 564  PAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDY 623

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIV+KQRLLIKK+DI ALQQRE+P+EGGWHDLV+KGFIEY+D       MISM
Sbjct: 624  GRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISM 683

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARLNPE+AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 684  TINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 743

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 744  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 803

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 844


>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
            gi|561011794|gb|ESW10701.1| hypothetical protein
            PHAVU_009G230400g [Phaseolus vulgaris]
          Length = 1196

 Score = 1510 bits (3910), Expect = 0.0
 Identities = 751/821 (91%), Positives = 774/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D 
Sbjct: 22   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDS 81

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AET+YKISFGQIYLSKPMMTESDGETA+LFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG
Sbjct: 82   AETVYKISFGQIYLSKPMMTESDGETASLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 141

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 142  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 201

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTS+KGGSSGQYI
Sbjct: 202  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYI 261

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMM+LLRPSLEEAFVIQNQQV
Sbjct: 262  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMDLLRPSLEEAFVIQNQQV 321

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRGSTVGVT+EKRIKYA+EILQKEMLPHVG+GEYCETKKAYYFGYIIHRLLLCA
Sbjct: 322  ALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLCA 381

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVR YVQKCVDNGK+VNLQFAIK
Sbjct: 382  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIK 441

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKT+TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 442  AKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 501

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 502  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 561

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCW+GIHRDPDMLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 562  PAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDY 621

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIV++QRLLIKKKDI ALQQRE+P+EGGWHDLV+KGFIEY+D       MISM
Sbjct: 622  GRCSRPLFIVDRQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISM 681

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV AR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 682  TINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 741

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 742  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 801

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 802  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 842


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1192

 Score = 1509 bits (3908), Expect = 0.0
 Identities = 752/821 (91%), Positives = 774/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 24   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 83

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG
Sbjct: 84   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 143

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTE QDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 144  EEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 203

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTS+KGGSSGQYI
Sbjct: 204  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYI 263

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFS TQMMELLRPSLEEAFVIQNQQV
Sbjct: 264  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMELLRPSLEEAFVIQNQQV 323

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 324  ALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 383

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 384  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 443

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 444  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 503

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 504  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 563

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCW+GIHRDPDMLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 564  PAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTDY 623

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIV+KQRLLIKKKDI ALQQRE+P++GGWHDLV+KGFIEY+D       MISM
Sbjct: 624  GRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISM 683

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV AR+NPE+AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 684  TINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 743

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+I+CYSGYNQEDS
Sbjct: 744  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGYNQEDS 803

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 844


>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1193

 Score = 1505 bits (3896), Expect = 0.0
 Identities = 750/821 (91%), Positives = 772/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 24   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 83

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRV+KKGHDG
Sbjct: 84   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVVKKGHDG 143

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQD TKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 144  EEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 203

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTS+KGGSSGQYI
Sbjct: 204  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYI 263

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDT MMELLRPSLEEAFVIQNQQV
Sbjct: 264  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTLMMELLRPSLEEAFVIQNQQV 323

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 324  ALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 383

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 384  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 443

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 444  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 503

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 504  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 563

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCW+GIHRDPDMLV+T       VDVNTEVGVVRDI LKELRIYTDY
Sbjct: 564  PAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIILKELRIYTDY 623

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIV+KQRLLIKKKDI ALQQRE+P++GGWHDLV+KGFIEY+D       MISM
Sbjct: 624  GRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISM 683

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV AR+NPE+AY+ TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 684  TINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 743

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 744  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 803

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 844


>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
            sinensis]
          Length = 1195

 Score = 1504 bits (3895), Expect = 0.0
 Identities = 751/821 (91%), Positives = 772/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q DF
Sbjct: 24   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSDF 83

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 84   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 143

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 144  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 203

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 204  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYI 263

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 264  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQV 323

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVTR+KRIKYA+EILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCA
Sbjct: 324  ALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCA 383

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVR YVQKCVDNGK+VNLQFAIK
Sbjct: 384  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIK 443

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 444  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 503

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 504  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 563

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHRDP+MLVKT       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 564  PAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 623

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIKK+DI ALQQRE+P++GGWHDLVAKGFIEY+D       MISM
Sbjct: 624  GRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISM 683

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARL+PEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 684  TINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 743

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 744  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 803

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 844


>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
            gi|557525528|gb|ESR36834.1| hypothetical protein
            CICLE_v10027701mg [Citrus clementina]
          Length = 1195

 Score = 1504 bits (3895), Expect = 0.0
 Identities = 751/821 (91%), Positives = 772/821 (94%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q DF
Sbjct: 24   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSDF 83

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 84   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 143

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 144  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 203

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 204  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYI 263

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 264  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQV 323

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVTR+KRIKYA+EILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCA
Sbjct: 324  ALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCA 383

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVR YVQKCVDNGK+VNLQFAIK
Sbjct: 384  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIK 443

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 444  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 503

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS
Sbjct: 504  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 563

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFVNGCWVGIHRDP+MLVKT       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 564  PAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 623

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIKK+DI ALQQRE+P++GGWHDLVAKGFIEY+D       MISM
Sbjct: 624  GRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISM 683

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV ARL+PEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 684  TINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 743

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 744  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 803

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 804  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 844


>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1213

 Score = 1503 bits (3891), Expect = 0.0
 Identities = 757/839 (90%), Positives = 776/839 (92%), Gaps = 35/839 (4%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 25   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 84

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG
Sbjct: 85   AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 144

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 145  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 204

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+VGEVRSMAESQNRPPS+MFVRMLSR SAKGGSSGQYI
Sbjct: 205  AQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRASAKGGSSGQYI 264

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 265  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQV 324

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRGSTVGVT+EKRIKYA++ILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 325  ALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 384

Query: 1580 -----------------XXXXXXXXXLFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVRGYVQKCVDNGK+VNLQFAIK
Sbjct: 385  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIK 444

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 445  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 504

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE--- 2059
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFE   
Sbjct: 505  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEVLV 564

Query: 2060 -----EISPAVIPQSTKIFVNGCWVGIHRDPDMLVKT----------XXXXXXXVDVNTE 2194
                 EISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T                 VDVNTE
Sbjct: 565  ISFIKEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRFSAEGFDVVQVDVNTE 624

Query: 2195 VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAK 2374
            VGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRE+P++GGWHDLV+K
Sbjct: 625  VGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEDGGWHDLVSK 684

Query: 2375 GFIEYVDXXXXXXXMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPD 2554
            GFIEY+D       MISMTINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPFPD
Sbjct: 685  GFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPD 744

Query: 2555 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 2734
            HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 745  HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 804

Query: 2735 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 805  INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 863


>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1195

 Score = 1502 bits (3888), Expect = 0.0
 Identities = 751/821 (91%), Positives = 771/821 (93%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DF
Sbjct: 25   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF 84

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
            AETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDG
Sbjct: 85   AETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDG 144

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVLI
Sbjct: 145  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLI 204

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYI
Sbjct: 205  AQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYI 264

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQV
Sbjct: 265  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQV 324

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 325  ALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 384

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVR YVQKCVDNGK+VNLQFAIK
Sbjct: 385  LGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIK 444

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 445  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 504

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEE GTENFEEIS
Sbjct: 505  PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEXGTENFEEIS 564

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQ+TKIFV+G W+GIHRDPDMLV+T       VDVNTEVGVVRDIRLKELRIYTDY
Sbjct: 565  PAVIPQATKIFVBGTWMGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDY 624

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQ+LLIKKKDIQ LQQRETP+EGGWHDLVAKG+IEY+D       MISM
Sbjct: 625  GRCSRPLFIVEKQKLLIKKKDIQQLQQRETPEEGGWHDLVAKGYIEYIDTEEEETTMISM 684

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDLV A +NPE+AYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 685  TINDLVQASINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 744

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS
Sbjct: 745  GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 804

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 805  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 845


>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
            vinifera] gi|147841183|emb|CAN72948.1| hypothetical
            protein VITISV_033708 [Vitis vinifera]
            gi|302143287|emb|CBI21848.3| unnamed protein product
            [Vitis vinifera]
          Length = 1193

 Score = 1499 bits (3880), Expect = 0.0
 Identities = 750/821 (91%), Positives = 769/821 (93%), Gaps = 17/821 (2%)
 Frame = +2

Query: 500  TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDF 679
            TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q DF
Sbjct: 23   TQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSDF 82

Query: 680  AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDG 859
             ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KR+IKKGHD 
Sbjct: 83   LETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHDL 142

Query: 860  EEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 1039
            EEVTETQ+FTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVLI
Sbjct: 143  EEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVLI 202

Query: 1040 AQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 1219
            AQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI
Sbjct: 203  AQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYI 262

Query: 1220 RATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 1399
            RATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV
Sbjct: 263  RATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQV 322

Query: 1400 ALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 1579
            ALDYIGKRGSTVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA
Sbjct: 323  ALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCA 382

Query: 1580 XXXXXXXXX-----------------LFRMLFRKLTRDVRGYVQKCVDNGKEVNLQFAIK 1708
                                      LFRMLFRKLTRDVR YVQKCVDNGK+VNLQFAIK
Sbjct: 383  LGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIK 442

Query: 1709 AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 1888
            AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK
Sbjct: 443  AKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAK 502

Query: 1889 PRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEIS 2068
            PRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEIS
Sbjct: 503  PRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEIS 562

Query: 2069 PAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDY 2248
            PAVIPQSTKIFVNGCWVGIHR+PD+LVKT       VDVNTEVGV+RDIRLKELR+YTDY
Sbjct: 563  PAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDY 622

Query: 2249 GRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXXMISM 2428
            GRCSRPLFIVEKQRLLIKK+DI+ALQ RE+P++GGWHDLV+KGFIEYVD       MISM
Sbjct: 623  GRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMISM 682

Query: 2429 TINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2608
            TINDL+SARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 683  TINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 742

Query: 2609 GIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 2788
            GIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 743  GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 802

Query: 2789 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2911
            VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR
Sbjct: 803  VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 843