BLASTX nr result

ID: Paeonia22_contig00000208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia22_contig00000208
         (504 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus]             308   7e-82
ref|NP_733974.1| movement protein [Cycas necrotic stunt virus]        297   9e-79
ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus] gi|1...   297   9e-79

>gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus]
          Length = 1289

 Score =  308 bits (788), Expect = 7e-82
 Identities = 146/168 (86%), Positives = 157/168 (93%)
 Frame = +1

Query: 1   WYIAKFKPHLEEETDWWKDLVKPRMGNPVHRIEQSRKSKCVESYRIPPPINGDEFANFLY 180
           WYIAKFKPHLEEETDWWKDLVKPRMGNPVH I  +RK K VES+RIPPP+NGDEFANFLY
Sbjct: 201 WYIAKFKPHLEEETDWWKDLVKPRMGNPVHEIGPNRKPKYVESHRIPPPLNGDEFANFLY 260

Query: 181 VCQCAKLAFDIERAESQENFEDALDILEEDFYDIDSTMLKRDLLNADARVVKRAIILRKK 360
            CQCAKLAFDIERAE++ENF+DALD LEEDFYDIDSTMLKRDLLNADARVVKRA+ILR+K
Sbjct: 261 TCQCAKLAFDIERAETEENFQDALDTLEEDFYDIDSTMLKRDLLNADARVVKRAVILRRK 320

Query: 361 RRPNRTPVFSMKGQPPVTFSASDLVSCLGQVLNKLPTMKMDREAIEDQ 504
           RRP RT ++SMKGQP VTFSASDL+SCLGQVLN LPTMKMDREAIEDQ
Sbjct: 321 RRPTRTSIYSMKGQPIVTFSASDLISCLGQVLNTLPTMKMDREAIEDQ 368


>ref|NP_733974.1| movement protein [Cycas necrotic stunt virus]
          Length = 683

 Score =  297 bits (761), Expect = 9e-79
 Identities = 142/168 (84%), Positives = 156/168 (92%)
 Frame = +1

Query: 1   WYIAKFKPHLEEETDWWKDLVKPRMGNPVHRIEQSRKSKCVESYRIPPPINGDEFANFLY 180
           WYIA+FKPHLEEET+WWKDLVKPRMGNPVH IE +RKS+ VES RIPPP+NGDEFANFL+
Sbjct: 152 WYIAEFKPHLEEETEWWKDLVKPRMGNPVHEIEPNRKSQYVESRRIPPPLNGDEFANFLH 211

Query: 181 VCQCAKLAFDIERAESQENFEDALDILEEDFYDIDSTMLKRDLLNADARVVKRAIILRKK 360
           VCQCAKLAFD+ERA ++ENFEDALD LEEDFYDIDST+ KRDLL ADARVVKRA  LR+K
Sbjct: 212 VCQCAKLAFDVERAATEENFEDALDTLEEDFYDIDSTIPKRDLLAADARVVKRAFTLRRK 271

Query: 361 RRPNRTPVFSMKGQPPVTFSASDLVSCLGQVLNKLPTMKMDREAIEDQ 504
           RRPNRT V+SMKGQPPVTFSASDLVSCLGQVL+ LPT+KMDREAIEDQ
Sbjct: 272 RRPNRTSVYSMKGQPPVTFSASDLVSCLGQVLSTLPTVKMDREAIEDQ 319


>ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus]
           gi|124106315|sp|Q8QVU9.2|POL2_CNSV RecName: Full=RNA2
           polyprotein; AltName: Full=P2; Contains: RecName:
           Full=Protein 2A; Short=P2A; Contains: RecName:
           Full=Movement protein; AltName: Full=2B-MP; Contains:
           RecName: Full=Coat protein; AltName: Full=2C-CP
           gi|84369993|dbj|BAB89370.2| polyprotien 2 [Cycas
           necrotic stunt virus]
          Length = 1240

 Score =  297 bits (761), Expect = 9e-79
 Identities = 142/168 (84%), Positives = 156/168 (92%)
 Frame = +1

Query: 1   WYIAKFKPHLEEETDWWKDLVKPRMGNPVHRIEQSRKSKCVESYRIPPPINGDEFANFLY 180
           WYIA+FKPHLEEET+WWKDLVKPRMGNPVH IE +RKS+ VES RIPPP+NGDEFANFL+
Sbjct: 152 WYIAEFKPHLEEETEWWKDLVKPRMGNPVHEIEPNRKSQYVESRRIPPPLNGDEFANFLH 211

Query: 181 VCQCAKLAFDIERAESQENFEDALDILEEDFYDIDSTMLKRDLLNADARVVKRAIILRKK 360
           VCQCAKLAFD+ERA ++ENFEDALD LEEDFYDIDST+ KRDLL ADARVVKRA  LR+K
Sbjct: 212 VCQCAKLAFDVERAATEENFEDALDTLEEDFYDIDSTIPKRDLLAADARVVKRAFTLRRK 271

Query: 361 RRPNRTPVFSMKGQPPVTFSASDLVSCLGQVLNKLPTMKMDREAIEDQ 504
           RRPNRT V+SMKGQPPVTFSASDLVSCLGQVL+ LPT+KMDREAIEDQ
Sbjct: 272 RRPNRTSVYSMKGQPPVTFSASDLVSCLGQVLSTLPTVKMDREAIEDQ 319


Top