BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00039179
         (594 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPD70354.1| hypothetical protein GOBAR_DD32770 [Gossypium bar...    57   2e-16
gb|PHU12529.1| hypothetical protein BC332_19459 [Capsicum chinense]    65   7e-16
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    62   1e-15
gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]    63   3e-15
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...    59   3e-14
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...    60   3e-14
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...    58   5e-14
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...    59   2e-13
gb|KYP31293.1| Retrovirus-related Pol polyprotein from transposo...    57   5e-13
gb|PHU29315.1| hypothetical protein BC332_01408 [Capsicum chinense]    59   2e-12
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      57   8e-12
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    54   2e-11
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      54   2e-11
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         56   3e-11
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                              57   4e-11
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...    49   4e-11
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                             57   4e-11
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...    49   4e-11
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...    50   5e-11
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    54   8e-11

>gb|PPD70354.1| hypothetical protein GOBAR_DD32770 [Gossypium barbadense]
          Length = 1042

 Score = 57.4 bits (137), Expect(2) = 2e-16
 Identities = 33/87 (37%), Positives = 50/87 (57%)
 Frame = +3

Query: 315  FSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLG 494
            F+T  +V  GV+L+ N         GTI++    G + TL  +RHVPK   NLISL T+ 
Sbjct: 782  FTTYEIVFEGVILIGNNASCKIACVGTIKVKMFDGVVRTLSGVRHVPKLKRNLISLSTID 841

Query: 495  SKVFTFKTESGCLETSKDIYIMFKTEK 575
            SK + ++TESG L+  K   ++ K ++
Sbjct: 842  SKGYKYRTESGVLKIFKGSLVVIKRQR 868



 Score = 55.8 bits (133), Expect(2) = 2e-16
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
 Frame = +1

Query: 79  SSHKNLVCNYCKRKRHIMSDCIKL*NK*KSD------DQESNTIGVATVED--DDLVLSI 234
           SS++   CN+CK+KRHI S C KL NK K +       Q  N      VED  D  +L  
Sbjct: 695 SSNRGKTCNFCKKKRHIKSKCYKLQNKIKREAANQNRKQPKNFTKADIVEDYGDGELLVA 754

Query: 235 TYESINAKNRWILDSGFSHHIN 300
           +  +      WILDSG++ HI+
Sbjct: 755 SINNSKVSKEWILDSGYTFHIS 776


>gb|PHU12529.1| hypothetical protein BC332_19459 [Capsicum chinense]
          Length = 448

 Score = 64.7 bits (156), Expect(2) = 7e-16
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = +3

Query: 309 EVFSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLET 488
           ++FST + V GGV+L+ N +    +  GT+++  H G + TL+++R+VP+   NLISL T
Sbjct: 116 DLFSTYDPVEGGVILVGNNVACKIVGTGTVRIKMHDGIVRTLKNVRYVPELKKNLISLGT 175

Query: 489 LGSKVFTFKTESGCLETSKDIYIMFKTEKFGNLY 590
           L S    +  E G  E S+   ++ K  K+G LY
Sbjct: 176 LESFGCKYTGEGGVFEVSRGGLVVMKARKYGTLY 209



 Score = 47.0 bits (110), Expect(2) = 7e-16
 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
 Frame = +1

Query: 79  SSHKNLVCNYCKRKRHIMSDCIKL*NK*K-----SDDQESNTIGVATVEDDDLVLSITYE 243
           S   N VC YC +K HI  +C KL NK K       D ++    VA  E +  +  +T  
Sbjct: 34  SRFSNSVCYYCHKKGHIKFNCPKLQNKGKVKKNEHGDSDTAEASVAADEIEGAIFLVTEN 93

Query: 244 SINAKNRWILDSGFSHHI 297
              + N WILDS  S H+
Sbjct: 94  ISCSNNEWILDSACSFHM 111


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 62.0 bits (149), Expect(2) = 1e-15
 Identities = 37/94 (39%), Positives = 51/94 (54%)
 Frame = +3

Query: 309 EVFSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLET 488
           ++F+T   V  GVVLM N         GTIQ+  H G+I TL ++R +P    NLISL T
Sbjct: 302 DLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGT 361

Query: 489 LGSKVFTFKTESGCLETSKDIYIMFKTEKFGNLY 590
           L S    +  E G L+ SK   ++ K  + G+LY
Sbjct: 362 LESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLY 395



 Score = 48.9 bits (115), Expect(2) = 1e-15
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
 Frame = +1

Query: 91  NLVCNYCKRKRHIMSDCIKL*NK*KSDDQESNTIGVATVE---DDDLVLSITYESINAKN 261
           N  C YCK+  H +SDC  L  K +  ++  N    A VE   D D+++S++ +   +K 
Sbjct: 227 NKTCRYCKKFGHDISDCFILKKKQERQEKGKNPAEAANVETDSDGDVMISVSSDK-RSKT 285

Query: 262 RWILDSGFSHHI 297
            WILDSG + H+
Sbjct: 286 EWILDSGCTFHM 297


>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
          Length = 707

 Score = 62.8 bits (151), Expect(2) = 3e-15
 Identities = 36/92 (39%), Positives = 51/92 (55%)
 Frame = +3

Query: 315 FSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLG 494
           F+T     GG+VLM N      + +GTI++  H G + TL  +RHVP    NLISL TL 
Sbjct: 302 FTTYESFNGGLVLMGNDAQCKVVGKGTIKIKTHDGVVRTLTSVRHVPDLKRNLISLGTLE 361

Query: 495 SKVFTFKTESGCLETSKDIYIMFKTEKFGNLY 590
           S+   +  E G L+ SK   ++ K  + G+LY
Sbjct: 362 SQGCRYSAEGGVLKVSKGALVLLKAIRSGSLY 393



 Score = 46.6 bits (109), Expect(2) = 3e-15
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK*KSDD-----QESNTIGVATVEDDDLVLSITYESINAKNR 264
           C YCK++ H +S+C KL NK   +D     ++S        E D      +     +KN 
Sbjct: 225 CRYCKKRNHEISECYKLKNKQNREDKGKQPEKSAEASFVETESDGECFIASGTEQRSKNE 284

Query: 265 WILDSGFSHHIN 300
           W+LDSG + H++
Sbjct: 285 WVLDSGCTFHMS 296


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score = 59.3 bits (142), Expect(2) = 3e-14
 Identities = 36/84 (42%), Positives = 46/84 (54%)
 Frame = +3

Query: 339 GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLGSKVFTFKT 518
           GG V M N +    I  GTIQ+  H G I TL ++RHVP    NLIS+  L +K F    
Sbjct: 239 GGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLHTKGFKCNV 298

Query: 519 ESGCLETSKDIYIMFKTEKFGNLY 590
           E G +E SK   ++ +  K GNLY
Sbjct: 299 EGGVMEISKGSTVVIRGIKKGNLY 322



 Score = 47.0 bits (110), Expect(2) = 3e-14
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = +1

Query: 97  VCNYCKRKRHIMSDCIKL*NK*KSDDQESNTIGVATVED----DDLVLSITYESINAKNR 264
           +CNYCK   H   DC K  N+         ++ VA  ED    ++LVLSI     ++  +
Sbjct: 162 ICNYCKEPGHWKKDCPKKRNQ--------KSVAVAAQEDSSFENELVLSIVDNHQHSAEQ 213

Query: 265 WILDSGFSHHI 297
           W+LDSG S+H+
Sbjct: 214 WVLDSGCSYHM 224


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score = 60.5 bits (145), Expect(2) = 3e-14
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = +3

Query: 339 GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLGSKVFTFKT 518
           GG V M N +P   +  GTIQL  H G I TL ++RHVP    NLIS+  L SK F    
Sbjct: 78  GGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTEVRHVPDLKKNLISVGVLDSKGFKCNV 137

Query: 519 ESGCLETSKDIYIMFKTEKFGNLY 590
           ++G +E  +   ++ +  K GNLY
Sbjct: 138 KNGVMEIKRGSTVVMRGFKKGNLY 161



 Score = 45.4 bits (106), Expect(2) = 3e-14
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK*KSDDQESNTIGVATVE-DDDLVLSITYESINAKNRWILD 276
           CNYCK   H  +DC K     K+    + T+  +T   D++LVLSI      + ++W+LD
Sbjct: 1   CNYCKEPGHWKNDCPKK----KNQKPTAVTVQESTSSSDNELVLSIVDNHQQSADQWVLD 56

Query: 277 SGFSHHI 297
           SG S+H+
Sbjct: 57  SGCSYHM 63


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 58.2 bits (139), Expect(2) = 5e-14
 Identities = 36/96 (37%), Positives = 49/96 (51%)
 Frame = +3

Query: 303 RDEVFSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISL 482
           R E F+T   V GG + M N      +  G+I++  H GS  TL ++RHVP    NLISL
Sbjct: 292 RREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISL 351

Query: 483 ETLGSKVFTFKTESGCLETSKDIYIMFKTEKFGNLY 590
             L SK F++  + G L   K   ++ K    G LY
Sbjct: 352 SLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLY 387



 Score = 47.0 bits (110), Expect(2) = 5e-14
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
 Frame = +1

Query: 97  VCNYCKRKRHIMSDCIKL*NK*KSDDQESNTIGVA---TVEDDDLVLSITYESINAKNRW 267
           VCNYCK K H   DC K   K K  +++S +  VA   T  ++D+ L +  E  +  + W
Sbjct: 224 VCNYCKEKGHWKFDCPK---KKKQSEKQSVSAAVAEEDTNSEEDIAL-VADEHTHHSDVW 279

Query: 268 ILDSGFSHHI 297
           +LDSG S+HI
Sbjct: 280 VLDSGASYHI 289


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score = 59.3 bits (142), Expect(2) = 2e-13
 Identities = 36/84 (42%), Positives = 46/84 (54%)
 Frame = +3

Query: 339 GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLGSKVFTFKT 518
           GG V M N +    I  GTIQ+  H G I TL ++RHVP    NLIS+  L +K F    
Sbjct: 291 GGDVFMGNDMACKTISIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLDTKGFKCNV 350

Query: 519 ESGCLETSKDIYIMFKTEKFGNLY 590
           E G +E +K   I+ +  K GNLY
Sbjct: 351 EGGVMEINKGSTIVIRGIKKGNLY 374



 Score = 44.3 bits (103), Expect(2) = 2e-13
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = +1

Query: 97  VCNYCKRKRHIMSDCIKL*NK*KSDDQESNTIGVATVED----DDLVLSITYESINAKNR 264
           +CNYCK   H   DC K  N+         ++ VA  ED    ++LVLSI     +   +
Sbjct: 214 ICNYCKEPGHWKKDCPKKRNQ--------KSVVVAAQEDSSFENELVLSIVDNHQHFVEQ 265

Query: 265 WILDSGFSHHI 297
           W+LDSG S+H+
Sbjct: 266 WVLDSGCSYHM 276


>gb|KYP31293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 569

 Score = 57.0 bits (136), Expect(2) = 5e-13
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = +3

Query: 339 GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLGSKVFTFKT 518
           GG V M N +P   +  GTIQL  H G I TL ++RHV     NLIS+  L SK F    
Sbjct: 216 GGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTEVRHVLDLKKNLISVGVLDSKGFKCNV 275

Query: 519 ESGCLETSKDIYIMFKTEKFGNLY 590
           ++G ++  +   I+ ++ K GNLY
Sbjct: 276 KNGVMDIKRGSTIVMRSFKKGNLY 299



 Score = 45.1 bits (105), Expect(2) = 5e-13
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 97  VCNYCKRKRHIMSDCIKL*NK*KS--DDQESNTIGVATVEDDDLVLSITYESINAKNRWI 270
           +CNYCK   H  +DC K  N   +    QES T       +++LVLSI      + ++W+
Sbjct: 138 ICNYCKEPSHWKNDCPKKKNHKPTIASVQESTTSS-----NNELVLSIVDNHQQSADQWV 192

Query: 271 LDSGFSHHI 297
           LDSG S+H+
Sbjct: 193 LDSGCSYHM 201


>gb|PHU29315.1| hypothetical protein BC332_01408 [Capsicum chinense]
          Length = 190

 Score = 59.3 bits (142), Expect(2) = 2e-12
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
 Frame = +3

Query: 285 FSSHQFRDE-VFSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKS 461
           FS H   ++ +FST + V GGVVL+ N +    + +GT+++  H G + TL ++R VP+ 
Sbjct: 75  FSFHMCPNKGLFSTYDPVEGGVVLVDNNVACKIVRKGTVRIKMHDGIVRTLRNVRCVPEL 134

Query: 462 WFNLISLETLGSKVFTFKTESGCLETSKDIYIMFKTEKFGNLY 590
             NLISL  L S    +  E G L+ S+   ++ K  K G LY
Sbjct: 135 KKNLISLGILESLGCKYTGEGGVLKVSRGGLVVMKARKSGTLY 177



 Score = 40.4 bits (93), Expect(2) = 2e-12
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
 Frame = +1

Query: 124 HIMSDCIKL*NK*K--SDDQESNTIGVATVEDDDL--VLSITYESIN-AKNRWILDSGFS 288
           HI  DC KL NK K   ++ E++    A+V  D++   +S+  E+I+ + N WILDS FS
Sbjct: 17  HIRFDCPKLQNKGKVKKNEHENSDTAEASVAADEIEGAISLVTENISCSNNEWILDSAFS 76

Query: 289 HHI 297
            H+
Sbjct: 77  FHM 79


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 56.6 bits (135), Expect(2) = 8e-12
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +3

Query: 315 FSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLG 494
           F+T   V GG VLM +  P      GT+Q+    G I TL D+RH+P    +LISL TL 
Sbjct: 226 FATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285

Query: 495 SKVFTFKTESGCLETSKDIYIMFKTE-KFGNLY 590
            K + +    G L+ +K   ++ K + K+ NLY
Sbjct: 286 RKGYKYSGGDGILKVTKGSLVVMKADIKYANLY 318



 Score = 41.2 bits (95), Expect(2) = 8e-12
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK--------*KSDDQESNTIGVATVEDDDLVLSITYES-IN 252
           C YCKR  H +S+C KL +K         K   +E     V T E  D  L + Y     
Sbjct: 145 CKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 204

Query: 253 AKNRWILDSGFSHHI 297
             ++WILD+  ++H+
Sbjct: 205 TSDQWILDTACTYHM 219


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 54.3 bits (129), Expect(2) = 2e-11
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +3

Query: 315 FSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLG 494
           F+T   + GG VLM +  P      GT+Q+    G I TL D+RH+P    +LISL TL 
Sbjct: 352 FATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411

Query: 495 SKVFTFKTESGCLETSKDIYIMFKTE-KFGNLY 590
            K + +    G L+ +K   ++ K + K  NLY
Sbjct: 412 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 444



 Score = 42.4 bits (98), Expect(2) = 2e-11
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK--------*KSDDQESNTIGVATVEDDDLVLSITYES-IN 252
           C YCKR  H +S+C KL +K         K   +E     V T E  D  L + Y     
Sbjct: 271 CKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQ 330

Query: 253 AKNRWILDSGFSHHI 297
             ++WILD+ +++H+
Sbjct: 331 TSDQWILDTAWTYHM 345


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 54.3 bits (129), Expect(2) = 2e-11
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +3

Query: 315 FSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLG 494
           F+T   + GG VLM +  P      GT+Q+    G I TL D+RH+P    +LISL TL 
Sbjct: 352 FATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411

Query: 495 SKVFTFKTESGCLETSKDIYIMFKTE-KFGNLY 590
            K + +    G L+ +K   ++ K + K  NLY
Sbjct: 412 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 444



 Score = 42.4 bits (98), Expect(2) = 2e-11
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK--------*KSDDQESNTIGVATVEDDDLVLSITYES-IN 252
           C YCKR  H +S+C KL +K         K   +E     V T E  D  L + Y     
Sbjct: 271 CKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQ 330

Query: 253 AKNRWILDSGFSHHI 297
             ++WILD+ +++H+
Sbjct: 331 TSDQWILDTAWTYHM 345


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 55.8 bits (133), Expect(2) = 3e-11
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +3

Query: 315 FSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLG 494
           F+T  +V GG VLM +  P      GT+Q+    G I TL D+RH+P    +LISL TL 
Sbjct: 317 FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376

Query: 495 SKVFTFKTESGCLETSKDIYIMFKTE-KFGNLY 590
            K + +    G L+ +K   ++ K   K  NLY
Sbjct: 377 RKGYKYSGGDGILKVTKGSLVVMKASIKSANLY 409



 Score = 40.0 bits (92), Expect(2) = 3e-11
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK--------*KSDDQESNTIGVATVEDDDLVLSITYES-IN 252
           C YCKR  H +S C KL +K         K   +E     V T E  D  L + Y     
Sbjct: 236 CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 295

Query: 253 AKNRWILDSGFSHHI 297
             ++WILD+  ++H+
Sbjct: 296 TSDQWILDTACTYHM 310


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score = 56.6 bits (135), Expect(2) = 4e-11
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +3

Query: 315 FSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLG 494
           F+T  +V GG VLM +  P      GT+Q+    G I TL D+RH+P    +LISL TL 
Sbjct: 302 FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 361

Query: 495 SKVFTFKTESGCLETSKDIYIMFKTE-KFGNLY 590
            K + +    G L+ +K   ++ K + K  NLY
Sbjct: 362 CKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 394



 Score = 38.9 bits (89), Expect(2) = 4e-11
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK--------*KSDDQESNTIGVATVEDDDLVLSITYES-IN 252
           C YCKR  H +S C KL +K         K   ++     V T E  D  L + Y     
Sbjct: 221 CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQ 280

Query: 253 AKNRWILDSGFSHHI 297
             ++WILD+  ++H+
Sbjct: 281 TSDQWILDTACTYHM 295


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score = 48.9 bits (115), Expect(2) = 4e-11
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = +1

Query: 82  SHKNLVCNYCKRKRHIMSDCIKL*NK*KSDDQESNTIGVATVE---DDDLVLSITYESIN 252
           S K + C YCK+  H+  DC K   K +S +Q+++   VA  +   D ++VL+++     
Sbjct: 726 SKKRIQCYYCKKYGHMKVDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVS--DSY 783

Query: 253 AKNRWILDSGFSHHIN 300
           A  RWILD+G + HI+
Sbjct: 784 AGGRWILDTGATFHIS 799



 Score = 46.6 bits (109), Expect(2) = 4e-11
 Identities = 26/65 (40%), Positives = 36/65 (55%)
 Frame = +3

Query: 342  GVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLGSKVFTFKTE 521
            G VLM N      +  GT+++    G + TL D+RH+P+   NLISL TL  K F +  E
Sbjct: 813  GSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAE 872

Query: 522  SGCLE 536
             G L+
Sbjct: 873  GGVLK 877


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score = 56.6 bits (135), Expect(2) = 4e-11
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +3

Query: 315 FSTCNLV*GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLG 494
           F+T  +V GG VLM +  P      GT+Q+    G I TL D+RH+P    +LISL TL 
Sbjct: 134 FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 193

Query: 495 SKVFTFKTESGCLETSKDIYIMFKTE-KFGNLY 590
            K + +    G L+ +K   ++ K + K  NLY
Sbjct: 194 CKGYKYSGGDGILKVTKGSLVVMKADIKSANLY 226



 Score = 38.9 bits (89), Expect(2) = 4e-11
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK--------*KSDDQESNTIGVATVEDDDLVLSITYES-IN 252
           C YCKR  H +S C KL +K         K   ++     V T E  D  L + Y     
Sbjct: 53  CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQ 112

Query: 253 AKNRWILDSGFSHHI 297
             ++WILD+  ++H+
Sbjct: 113 TSDQWILDTACTYHM 127


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score = 48.9 bits (115), Expect(2) = 4e-11
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = +1

Query: 82  SHKNLVCNYCKRKRHIMSDCIKL*NK*KSDDQESNTIGVATVE---DDDLVLSITYESIN 252
           S K + C YCK+  H+  DC K   K +S +Q+++   VA  +   D ++VL+++     
Sbjct: 747 SKKRIQCYYCKKYGHMKVDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVS--DSY 804

Query: 253 AKNRWILDSGFSHHIN 300
           A  RWILD+G + HI+
Sbjct: 805 AGGRWILDTGATFHIS 820



 Score = 46.6 bits (109), Expect(2) = 4e-11
 Identities = 26/65 (40%), Positives = 36/65 (55%)
 Frame = +3

Query: 342  GVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLGSKVFTFKTE 521
            G VLM N      +  GT+++    G + TL D+RH+P+   NLISL TL  K F +  E
Sbjct: 834  GSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAE 893

Query: 522  SGCLE 536
             G L+
Sbjct: 894  GGVLK 898


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1175

 Score = 49.7 bits (117), Expect(2) = 5e-11
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +3

Query: 339 GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLGSKVFTFKT 518
           G VV M +  P   +  G++Q+  H G   TL+D+RH+P+   NLISL TL ++ + +  
Sbjct: 213 GDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPRMARNLISLSTLDAEGYKYSG 272

Query: 519 ESGCLETSK-DIYIMFKTEKFGNLY 590
             G ++ SK  +  M       NLY
Sbjct: 273 SGGVVKVSKGSLVYMIGDMNSANLY 297



 Score = 45.4 bits (106), Expect(2) = 5e-11
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK*K-SDDQESNTIGVATVEDDDLVLSITYESINAKNRWILD 276
           C YCK+K H + +C KL NK K   D +++ +  A   D    L +    +++ + WILD
Sbjct: 131 CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVTSADNSDSGDCLVVFVVCVSSHDEWILD 190

Query: 277 SGFSHHI 297
           +  S HI
Sbjct: 191 TTCSFHI 197


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 53.5 bits (127), Expect(2) = 8e-11
 Identities = 34/84 (40%), Positives = 42/84 (50%)
 Frame = +3

Query: 339 GGVVLMCNYIPYNAIDQGTIQLC*HVGSITTLEDIRHVPKSWFNLISLETLGSKVFTFKT 518
           GGVV M N  P   +  G+I+L  H GS   L D+R+VPK   NLISL  L SK      
Sbjct: 249 GGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTM 308

Query: 519 ESGCLETSKDIYIMFKTEKFGNLY 590
             G L+ +    +M K     NLY
Sbjct: 309 RDGILKATLGALVMLKGVMKNNLY 332



 Score = 40.8 bits (94), Expect(2) = 8e-11
 Identities = 21/66 (31%), Positives = 35/66 (53%)
 Frame = +1

Query: 100 CNYCKRKRHIMSDCIKL*NK*KSDDQESNTIGVATVEDDDLVLSITYESINAKNRWILDS 279
           C +C  K H   DC KL  K K   Q++N     +  + D+ L ++  + +  + WILDS
Sbjct: 170 CAFCHEKGHWKKDCPKLQKKEKVP-QDANVAECKSDVESDISLIVSLSASSYPDEWILDS 228

Query: 280 GFSHHI 297
           G ++H+
Sbjct: 229 GCTYHM 234