BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00037955
         (635 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023372657.1| splicing factor 3B subunit 1 [Otolemur garne...    55   3e-11

>ref|XP_023372657.1| splicing factor 3B subunit 1 [Otolemur garnettii]
          Length = 819

 Score = 55.5 bits (132), Expect(2) = 3e-11
 Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
 Frame = +1

Query: 226 SILRALKAIVNVIGMIKIT-PIKDLFSQSQGIEKRSF*SFLRC*RHKKKIQG----LLEK 390
           SIL ALKAIVNVIGM K+T PIKDL  +   I K          RH+K  +     LLE 
Sbjct: 585 SILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKN---------RHEKVQENICFELLEL 635

Query: 391 FKAYGKRVRKAIVNSFGGIAEDI 459
            KA+ K +R+A VN+FG IA+ I
Sbjct: 636 LKAHKKAIRRATVNTFGYIAKAI 658



 Score = 40.8 bits (94), Expect(2) = 3e-11
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = +2

Query: 50  NLLKTADLATIITVIKPDNDSIDEYVSNTT 139
           NL K A LAT+I+ ++PD D++DEYV NTT
Sbjct: 537 NLAKAAGLATMISTMRPDIDNMDEYVRNTT 566