BLASTX nr result

ID: Ophiopogon26_contig00010163 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00010163
         (362 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020672116.1| pentatricopeptide repeat-containing protein ...    56   1e-06
ref|XP_020245916.1| pentatricopeptide repeat-containing protein ...    54   5e-06

>ref|XP_020672116.1| pentatricopeptide repeat-containing protein At5g14080 [Dendrobium
           catenatum]
 gb|PKU66882.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 660

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 25/50 (50%), Positives = 38/50 (76%)
 Frame = +1

Query: 211 NKGNYIVASTIMYGLSCKV*GDSSDFILIKSLTDAGEVDMAIKHMKRIQN 360
           ++GNY+ AS +M+G+  K+    SD IL+KSL DAGE+DMA KH++ ++N
Sbjct: 558 SEGNYVYASHVMHGVPDKIESCDSDIILLKSLADAGEMDMAAKHVEWVKN 607


>ref|XP_020245916.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245917.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245918.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245919.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245920.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245922.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245923.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245924.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245925.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 ref|XP_020245926.1| pentatricopeptide repeat-containing protein At5g14080 [Asparagus
           officinalis]
 gb|ONK58541.1| uncharacterized protein A4U43_C09F14130 [Asparagus officinalis]
          Length = 585

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = +1

Query: 214 KGNYIVASTIMYGLSCKV*GDSSDFILIKSLTDAGEVDMAIKHMKRIQ 357
           + NYI AS +M+GL   +    S  IL+KSLTDAGE++MA++HMK I+
Sbjct: 477 EANYIEASNVMHGLPSNIEDSGSHVILLKSLTDAGEIEMAVEHMKWIK 524


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