BLASTX nr result
ID: Ophiopogon26_contig00008138
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00008138
(468 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK79364.1| uncharacterized protein A4U43_C01F5610 [Asparagus... 139 1e-38
ref|XP_009386605.1| PREDICTED: cleavage and polyadenylation spec... 123 1e-29
ref|XP_009412148.1| PREDICTED: cleavage and polyadenylation spec... 120 8e-29
ref|XP_008788908.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 119 2e-28
ref|XP_010943293.1| PREDICTED: RNA-binding protein cabeza-like [... 119 3e-28
ref|XP_009399899.1| PREDICTED: spidroin-1-like [Musa acuminata s... 117 9e-28
ref|XP_010928099.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 116 2e-27
ref|XP_015651098.1| PREDICTED: cleavage and polyadenylation spec... 116 3e-27
gb|PKA52981.1| Glycine-rich RNA-binding protein 2, mitochondrial... 115 5e-27
ref|XP_017701713.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 115 5e-27
ref|XP_017701714.1| PREDICTED: RNA-binding protein cabeza-like [... 114 2e-26
ref|XP_006659525.1| PREDICTED: translation initiation factor IF-... 112 5e-26
ref|XP_010928098.1| PREDICTED: RNA-binding protein cabeza-like [... 112 7e-26
ref|XP_020691711.1| cleavage and polyadenylation specificity fac... 109 7e-25
ref|XP_021320781.1| uncharacterized protein LOC8055363 [Sorghum ... 108 1e-24
gb|AQK58139.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 108 1e-24
gb|ONM02621.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 108 2e-24
ref|XP_008662999.1| cleavage and polyadenylation specificity fac... 108 2e-24
ref|XP_010928097.1| PREDICTED: RNA-binding protein cabeza-like [... 107 3e-24
ref|XP_004973768.1| U1 small nuclear ribonucleoprotein 70 kDa [S... 107 4e-24
>gb|ONK79364.1| uncharacterized protein A4U43_C01F5610 [Asparagus officinalis]
Length = 208
Score = 139 bits (351), Expect = 1e-38
Identities = 68/98 (69%), Positives = 72/98 (73%), Gaps = 10/98 (10%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
+PSFPPVVAPHVNPAFF MW DPS+GGW GE+QSSYGEDAGSDHQYGEGGS
Sbjct: 24 LPSFPPVVAPHVNPAFFGRGMPGGGVGMWPDPSMGGWTGEDQSSYGEDAGSDHQYGEGGS 83
Query: 183 NRKERVAERGPDRDW----------HREKDVGGGQEWS 266
+ KERV ERGPDRDW REKDV GGQEWS
Sbjct: 84 HVKERVGERGPDRDWQGAGGSDRRHEREKDV-GGQEWS 120
>ref|XP_009386605.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Musa acuminata subsp. malaccensis]
Length = 619
Score = 123 bits (308), Expect = 1e-29
Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
MPSFPPVVAPHVNPAFF MW DP++GGWGGEEQSSYGEDA SD QYGE GS
Sbjct: 428 MPSFPPVVAPHVNPAFFGRGLAPGGIGMWSDPNMGGWGGEEQSSYGEDATSDQQYGE-GS 486
Query: 183 NRKERVAER----GPDRDWHREKDVGGGQEW 263
+ K+R+AER PDR REKD+G GQ+W
Sbjct: 487 HGKDRMAERDRYSAPDRKPEREKDMGSGQDW 517
>ref|XP_009412148.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Musa acuminata subsp. malaccensis]
ref|XP_018684079.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Musa acuminata subsp. malaccensis]
Length = 634
Score = 120 bits (302), Expect = 8e-29
Identities = 58/91 (63%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
MPSFPPVVAPHVNPAFF MW DP++GGWGGE+QSSYGEDA SD QYGE GS
Sbjct: 445 MPSFPPVVAPHVNPAFFGRGLAPGGVGMWSDPNMGGWGGEDQSSYGEDATSDQQYGE-GS 503
Query: 183 NRKERVAER----GPDRDWHREKDVGGGQEW 263
+ K+R+AER P+R +EKD+G GQEW
Sbjct: 504 HGKDRMAERDRYGAPERRHEKEKDMGSGQEW 534
>ref|XP_008788908.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 6-like [Phoenix dactylifera]
Length = 608
Score = 119 bits (299), Expect = 2e-28
Identities = 60/97 (61%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
MPSFPPVVAPHVNPAFF MW DPS+GGWGGEEQSSYG+DA SD QYGEG
Sbjct: 416 MPSFPPVVAPHVNPAFFGRGGMAAGGVGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGS 475
Query: 180 SNRKERVAERGPDRDW--------HREKDVGGGQEWS 266
+ +RGPDRDW REKD+G GQEWS
Sbjct: 476 HGK-----DRGPDRDWSGASDRRHDREKDMGPGQEWS 507
>ref|XP_010943293.1| PREDICTED: RNA-binding protein cabeza-like [Elaeis guineensis]
ref|XP_010943294.1| PREDICTED: RNA-binding protein cabeza-like [Elaeis guineensis]
Length = 604
Score = 119 bits (297), Expect = 3e-28
Identities = 59/97 (60%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
MPSFPPVVAPHVNPAFF MW DPS+GGWGGEEQSSYG+DA SD QYGEG
Sbjct: 412 MPSFPPVVAPHVNPAFFGRGGMAAAGVGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGS 471
Query: 180 SNRKERVAERGPDRDW--------HREKDVGGGQEWS 266
+ +RGPDRDW R+KD+G GQEWS
Sbjct: 472 HGK-----DRGPDRDWSGASDRRHERDKDMGPGQEWS 503
>ref|XP_009399899.1| PREDICTED: spidroin-1-like [Musa acuminata subsp. malaccensis]
ref|XP_009399907.1| PREDICTED: spidroin-1-like [Musa acuminata subsp. malaccensis]
Length = 618
Score = 117 bits (294), Expect = 9e-28
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
MPSFPP+VAPHVNPAFF MW DP++GGWGGEEQ+SYGEDA SD QYGE GS
Sbjct: 425 MPSFPPIVAPHVNPAFFGRGLPPGGIGMWSDPNMGGWGGEEQASYGEDAASDQQYGE-GS 483
Query: 183 NRKERVAER----GPDRDWHREKDVGGGQEW 263
+ K+R+AER DR R+KD+G GQ+W
Sbjct: 484 HGKDRMAERDRYGALDRKAERDKDMGSGQDW 514
>ref|XP_010928099.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein cabeza-like
[Elaeis guineensis]
Length = 576
Score = 116 bits (291), Expect = 2e-27
Identities = 58/97 (59%), Positives = 64/97 (65%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
MPSFPPVVAPHVNPAFF MW DPS+GGWG EEQSSYG+DA SD +YGEG
Sbjct: 402 MPSFPPVVAPHVNPAFFGRGGMAAGGVGMWPDPSMGGWGAEEQSSYGDDAASDQRYGEGS 461
Query: 180 SNRKERVAERGPDRDW--------HREKDVGGGQEWS 266
+ +RGPDRDW REKD+G GQEWS
Sbjct: 462 HGK-----DRGPDRDWSGVSDRRHDREKDIGPGQEWS 493
>ref|XP_015651098.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Oryza sativa Japonica Group]
dbj|BAD09668.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
dbj|BAF24025.1| Os08g0490300 [Oryza sativa Japonica Group]
gb|EAZ07439.1| hypothetical protein OsI_29693 [Oryza sativa Indica Group]
gb|EAZ43160.1| hypothetical protein OsJ_27752 [Oryza sativa Japonica Group]
dbj|BAG90171.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAT06011.1| Os08g0490300 [Oryza sativa Japonica Group]
Length = 603
Score = 116 bits (290), Expect = 3e-27
Identities = 59/96 (61%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
M FPPVVAPHVNPAFF MW DP++GGWGGEEQSSYG+DA SD QYGEGG
Sbjct: 407 MQPFPPVVAPHVNPAFFGRGGMGAGGVGMWPDPNMGGWGGEEQSSYGDDAASDQQYGEGG 466
Query: 180 SNRKERVAERGPDRDW--------HREKDVGGGQEW 263
S+ KER AER PDR+W REKD+ QEW
Sbjct: 467 SHGKER-AERPPDREWSGASERRREREKDIPPAQEW 501
>gb|PKA52981.1| Glycine-rich RNA-binding protein 2, mitochondrial [Apostasia
shenzhenica]
Length = 638
Score = 115 bits (289), Expect = 5e-27
Identities = 57/96 (59%), Positives = 64/96 (66%), Gaps = 8/96 (8%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
+PSFPPVVAPHVNPAFF MW DPS+GGWGGEEQSSYG+DA SD QYGEG
Sbjct: 436 LPSFPPVVAPHVNPAFFGRGMPGGGMGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGSY 495
Query: 183 NRKERVAERGPDRDWH--------REKDVGGGQEWS 266
+ +RG DRDW REKD+G GQE+S
Sbjct: 496 GK-----DRGADRDWSGASERRQGREKDMGPGQEFS 526
>ref|XP_017701713.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein cabeza-like
[Phoenix dactylifera]
Length = 573
Score = 115 bits (288), Expect = 5e-27
Identities = 59/97 (60%), Positives = 63/97 (64%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
MPSFPPVVAPHVNPAFF MW DPS+GGWGGEEQSSYG+DA SD YGEG
Sbjct: 393 MPSFPPVVAPHVNPAFFGRGGVAAGGVGMWLDPSMGGWGGEEQSSYGDDAASDQWYGEGS 452
Query: 180 SNRKERVAERGPDRDW--------HREKDVGGGQEWS 266
+ +RGPDRDW REKDVG G EWS
Sbjct: 453 HGK-----DRGPDRDWSGVSDRKHDREKDVGPGPEWS 484
>ref|XP_017701714.1| PREDICTED: RNA-binding protein cabeza-like [Phoenix dactylifera]
Length = 628
Score = 114 bits (285), Expect = 2e-26
Identities = 57/97 (58%), Positives = 64/97 (65%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
MPSFPPVVAPHVNPAFF MW DPS+GGWGGEEQSSYG+DA SD +YGEG
Sbjct: 446 MPSFPPVVAPHVNPAFFGRGGMAASGVGMWPDPSMGGWGGEEQSSYGDDAASDQRYGEGS 505
Query: 180 SNRKERVAERGPDRDW--------HREKDVGGGQEWS 266
+ +RGPDRDW + KD+G GQEWS
Sbjct: 506 HGK-----DRGPDRDWSGISDRRHDKGKDMGPGQEWS 537
>ref|XP_006659525.1| PREDICTED: translation initiation factor IF-2-like [Oryza
brachyantha]
Length = 600
Score = 112 bits (281), Expect = 5e-26
Identities = 56/96 (58%), Positives = 65/96 (67%), Gaps = 9/96 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
M FPPVVAPHVNPAFF MW DP++GGWGGEEQSSYG+DA SD QYGEGG
Sbjct: 408 MQPFPPVVAPHVNPAFFGRGGMGAGGVGMWPDPNMGGWGGEEQSSYGDDAASDQQYGEGG 467
Query: 180 SNRKERVAERGPDRDW--------HREKDVGGGQEW 263
++ KER A+R PDR+W REKD+ Q+W
Sbjct: 468 NHGKER-ADRPPDREWSGASERRREREKDIPPAQDW 502
>ref|XP_010928098.1| PREDICTED: RNA-binding protein cabeza-like [Elaeis guineensis]
Length = 597
Score = 112 bits (280), Expect = 7e-26
Identities = 56/97 (57%), Positives = 63/97 (64%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
MPSFPPVVAPH+NPAFF MW DPS+GGWGGEEQSSYG+DA SD +YGEG
Sbjct: 409 MPSFPPVVAPHLNPAFFGRGGMAAGGVGMWPDPSMGGWGGEEQSSYGDDAASDQRYGEGS 468
Query: 180 SNRKERVAERGPDRDWHR--------EKDVGGGQEWS 266
+ +RGPDRDW R E D+G QEWS
Sbjct: 469 HGK-----DRGPDRDWSRVSDRRHDKETDMGPAQEWS 500
>ref|XP_020691711.1| cleavage and polyadenylation specificity factor subunit 6-like
[Dendrobium catenatum]
ref|XP_020691712.1| cleavage and polyadenylation specificity factor subunit 6-like
[Dendrobium catenatum]
ref|XP_020691713.1| cleavage and polyadenylation specificity factor subunit 6-like
[Dendrobium catenatum]
gb|PKU87547.1| Glycine-rich RNA-binding protein 7 [Dendrobium catenatum]
Length = 636
Score = 109 bits (273), Expect = 7e-25
Identities = 52/96 (54%), Positives = 62/96 (64%), Gaps = 8/96 (8%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
+PSFPPVVAPHVNPAFF MW DP++GGWG +EQSSYG+DA SD QYGEG
Sbjct: 452 LPSFPPVVAPHVNPAFFGRGMPSAGVGMWSDPNMGGWGADEQSSYGDDATSDQQYGEG-- 509
Query: 183 NRKERVAERGPDRDWH--------REKDVGGGQEWS 266
V +RG DRDW ++K+ G GQ+WS
Sbjct: 510 ---SHVKDRGGDRDWSVAPDRRHMKDKNTGHGQDWS 542
>ref|XP_021320781.1| uncharacterized protein LOC8055363 [Sorghum bicolor]
gb|EES15461.2| hypothetical protein SORBI_3007G222800 [Sorghum bicolor]
Length = 602
Score = 108 bits (271), Expect = 1e-24
Identities = 55/91 (60%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
M FPPVVAPHVNPAFF MW DP++G WGGEEQSSYG+DA SD QYGEGGS
Sbjct: 409 MQPFPPVVAPHVNPAFFGRGGMGAGG-MWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGS 467
Query: 183 NRKERVAER----GPDRDWHREKDVGGGQEW 263
+ KER ER P+R REKD QEW
Sbjct: 468 HGKERPPEREWSGAPERRREREKDAPPAQEW 498
>gb|AQK58139.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 603
Score = 108 bits (271), Expect = 1e-24
Identities = 55/91 (60%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
M FPPVVAPHVNPAFF MW DP++G WGGEEQSSYG+DA SD QYGEGGS
Sbjct: 408 MQPFPPVVAPHVNPAFFGRGGMGAGG-MWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGS 466
Query: 183 NRKERVAER----GPDRDWHREKDVGGGQEW 263
+ KER ER P+R REKD QEW
Sbjct: 467 HGKERPPEREWSGAPERRREREKDAPPAQEW 497
>gb|ONM02621.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Zea mays]
Length = 596
Score = 108 bits (269), Expect = 2e-24
Identities = 55/91 (60%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
M FPPVVAPHVNPAFF MW DP++G WGGEEQSSYG+DA SD QYGEGGS
Sbjct: 405 MQPFPPVVAPHVNPAFFGRAGMGAGG-MWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGS 463
Query: 183 NRKERVAERG----PDRDWHREKDVGGGQEW 263
+ KER ER P+R REKD QEW
Sbjct: 464 HGKERPPEREWSGVPERRREREKDAPPAQEW 494
>ref|XP_008662999.1| cleavage and polyadenylation specificity factor subunit 6 [Zea
mays]
Length = 668
Score = 108 bits (269), Expect = 2e-24
Identities = 55/91 (60%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
M FPPVVAPHVNPAFF MW DP++G WGGEEQSSYG+DA SD QYGEGGS
Sbjct: 477 MQPFPPVVAPHVNPAFFGRAGMGAGG-MWPDPNMGAWGGEEQSSYGDDAASDQQYGEGGS 535
Query: 183 NRKERVAERG----PDRDWHREKDVGGGQEW 263
+ KER ER P+R REKD QEW
Sbjct: 536 HGKERPPEREWSGVPERRREREKDAPPAQEW 566
>ref|XP_010928097.1| PREDICTED: RNA-binding protein cabeza-like [Elaeis guineensis]
Length = 570
Score = 107 bits (268), Expect = 3e-24
Identities = 57/97 (58%), Positives = 63/97 (64%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXX-MWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGG 179
MPSFPPVVAPHVNPAFF MW DPS+GGWGGEEQSSYG+DA SD +YGEG
Sbjct: 397 MPSFPPVVAPHVNPAFFGRGGMAAGGVGMWPDPSMGGWGGEEQSSYGDDAASDQRYGEGS 456
Query: 180 SNRKERVAERGPDRD--------WHREKDVGGGQEWS 266
+ +RGPDRD REKD+G GQE S
Sbjct: 457 HGK-----DRGPDRDRSGFSDRRHDREKDMGPGQERS 488
>ref|XP_004973768.1| U1 small nuclear ribonucleoprotein 70 kDa [Setaria italica]
Length = 598
Score = 107 bits (267), Expect = 4e-24
Identities = 54/91 (59%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
Frame = +3
Query: 3 MPSFPPVVAPHVNPAFFXXXXXXXXXXMWQDPSVGGWGGEEQSSYGEDAGSDHQYGEGGS 182
M FPPVVAPHVNPAFF MW DP++G WGGEEQSSYG+DA SD Q+GEGGS
Sbjct: 409 MQPFPPVVAPHVNPAFFGRGGMGAGG-MWPDPNMGAWGGEEQSSYGDDAASDQQHGEGGS 467
Query: 183 NRKERVAER----GPDRDWHREKDVGGGQEW 263
+ KER ER P+R RE+DV QEW
Sbjct: 468 HGKERPPEREWSGAPERRRERERDVPPAQEW 498