BLASTX nr result

ID: Ophiopogon25_contig00053675 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00053675
         (638 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC15559.1| hypothetical protein RhiirA5_408053 [Rhizophagus ...    56   4e-06
dbj|GBC13409.1| hypothetical protein: PROVISIONAL [Rhizophagus i...    50   6e-06

>gb|PKC15559.1| hypothetical protein RhiirA5_408053 [Rhizophagus irregularis]
          Length = 217

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -3

Query: 90  QKFANIISVIWE*FADIFDRMKGANDYSLD 1
           QKFANIISVIWE F DIFDR+K ANDYSLD
Sbjct: 136 QKFANIISVIWEQFTDIFDRIKSANDYSLD 165


>dbj|GBC13409.1| hypothetical protein: PROVISIONAL [Rhizophagus irregularis DAOM
           181602]
 gb|POG60468.1| hypothetical protein GLOIN_2v1787821 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 204

 Score = 50.1 bits (118), Expect(2) = 6e-06
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = -3

Query: 90  QKFANIISVIWE*FADIFDRMKGANDYSLD 1
           QKF NIISVI + F DIFDR+KGANDYSLD
Sbjct: 122 QKFTNIISVILKQFIDIFDRIKGANDYSLD 151



 Score = 28.1 bits (61), Expect(2) = 6e-06
 Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
 Frame = -2

Query: 490 VANKLSARVSEIIDNSTAEISKIKDE*TLRKSKKLKHVITLFLQDEWNFGIAQYHRK*TL 311
           ++N+++ R+SEI  + TAE  +I        + KL + +T  ++      I +     T 
Sbjct: 8   ISNEVTTRLSEINASFTAEFGRI--------NTKLNNKLTAEIE------IFRARNAATP 53

Query: 310 VRSKKLWNNIIISKFTPINT--SIENFHMVQLSVTND 206
            + +K W ++I S+   I T   ++++   Q SV+N+
Sbjct: 54  QKRRKYWEDLITSRKPAIMTLAVLDSYSKDQQSVSNE 90


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