BLASTX nr result

ID: Ophiopogon25_contig00045590 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00045590
         (952 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC21288.1| hypothetical protein RIR_0852800 [Rhizophagus ir...    74   2e-13
gb|PKY41274.1| hypothetical protein RhiirA4_395732, partial [Rhi...    49   4e-09

>dbj|GBC21288.1| hypothetical protein RIR_0852800 [Rhizophagus irregularis DAOM
           181602]
          Length = 73

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +1

Query: 778 VRYLLNKSVITLYKKRIRIDYCLGLFGYNQERRGGKGIS 894
           + YLLNKSVITLYKKRIRIDYCLGLFGYNQ+R+GGKG S
Sbjct: 32  IGYLLNKSVITLYKKRIRIDYCLGLFGYNQKRKGGKGNS 70


>gb|PKY41274.1| hypothetical protein RhiirA4_395732, partial [Rhizophagus
           irregularis]
          Length = 67

 Score = 48.9 bits (115), Expect(2) = 4e-09
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = -3

Query: 224 PGSYNQDHATRIMQLELCIVLMINTDTVCNNPCSRVLSFY 105
           P   NQ+HATRIMQLELC VLMIN DTV     +RVL+F+
Sbjct: 4   PELRNQNHATRIMQLELCTVLMINIDTV----ITRVLAFF 39



 Score = 41.6 bits (96), Expect(2) = 4e-09
 Identities = 21/27 (77%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
 Frame = -2

Query: 126 FSRSFV-LLKNDDAVILKTYIILKTYN 49
           F RS + L+KNDDAVILKTYIILKTY+
Sbjct: 38  FFRSIINLMKNDDAVILKTYIILKTYS 64


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