BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00032148
         (1120 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   191   8e-84
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   174   8e-72
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   162   7e-70
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   162   7e-70
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     167   1e-68
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     169   2e-68
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     164   2e-68
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   157   5e-68
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   165   6e-68
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     165   6e-68
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   165   2e-67
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   163   2e-67
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar...   186   2e-65
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   159   3e-65
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   152   2e-63
gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]    155   5e-62
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   142   6e-62
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|...   190   2e-61
ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281...   155   7e-61
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   157   3e-60

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  191 bits (485), Expect(2) = 8e-84
 Identities = 126/266 (47%), Positives = 154/266 (57%), Gaps = 3/266 (1%)
 Frame = -1

Query: 1111 KKIIMSRDVTFDEASMLKPPCSQQVENIQIEEPLQGVEFDVAPQLSPDISVSVDIPTAMM 932
            KK I+SRDVTFDE++ML    ++Q +N     P Q VEF+            +  P    
Sbjct: 476  KKTIISRDVTFDESTMLGKVTTEQKKN---GTPKQ-VEFE----------RKIVFPA--- 518

Query: 931  LDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQ--DSIAAHKPKCHIRKPKKYDD 758
                          D+   P VD E  +++   Q+  Q  +SIA  KPK     P +Y D
Sbjct: 519  -------------NDEEKTPMVDEESDEEEVHIQEPPQQLESIALRKPKRTTIMPARYVD 565

Query: 757  MIVAYALPAEVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKA 578
            M V+YA P  V  D IP TY EA   SE ++WR AM +EM SL +N TW+LA LPKGKKA
Sbjct: 566  M-VSYASP--VASDDIPTTYIEAVKGSEEDKWRSAMSEEMESLRRNQTWKLANLPKGKKA 622

Query: 577  IGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSIRIXXXXXXX 401
            IGCK VYAKK+G S K  VR+KARLVAKGYAQ EG+DYNE FSPVVKHSSIR+       
Sbjct: 623  IGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRVLLALVAQ 682

Query: 400  XXXXXXXXXVKTAFLHGDSDEDLYDT 323
                     VKTAFLHGD +E++Y T
Sbjct: 683  LDMELVQMDVKTAFLHGDLEEEIYMT 708



 Score =  149 bits (377), Expect(2) = 8e-84
 Identities = 81/128 (63%), Positives = 88/128 (68%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGFRXXXXX----------------PRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYMTQP GF+                     PRQ YK FD F++ ++YTRS YD CVYL 
Sbjct: 705  IYMTQPEGFKVAGKENMFCKLEKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLR 764

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            KL  G +IYLLLYVDDMLIASKN   I KLK QL+ EFEMKDLGEAKKILGMEI RDRK 
Sbjct: 765  KLHDGSFIYLLLYVDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKL 824

Query: 24   GRLCLTQK 1
            GRLCLTQK
Sbjct: 825  GRLCLTQK 832


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  174 bits (441), Expect(2) = 8e-72
 Identities = 113/275 (41%), Positives = 157/275 (57%), Gaps = 9/275 (3%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASML----KPPCSQQVENIQIEEPLQGVEFDVAPQLSPDISVSV 953
            P +K++IMSR+V FDE+ +L    KP  + +  ++  +     VEF V    S       
Sbjct: 677  PAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQ-----VEFQVIQNES------- 724

Query: 952  DIPTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPK-CHIRK 776
                          D    E +D  +P+ +T++P+        +  SIA  +P+   +R 
Sbjct: 725  --------------DLKEPEEED-QEPQTETDIPESM---PSDIHQSIAQDRPRRVGVRP 766

Query: 775  PKKY--DDMIVAYALP-AEVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWEL 605
            P +Y  +DM V YAL  AE ++ S P TY+EA LSS+S +W  AM DEM SLHKN TW+L
Sbjct: 767  PTRYGFEDM-VGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDL 825

Query: 604  AKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSI 428
               P G+K I CK V+ KKEG SP EGV++KAR+VA+G+ Q EGVDYNE FSPVV+H+SI
Sbjct: 826  VIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSI 885

Query: 427  RIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLYDT 323
            R+                VKTAFLHG+ +E++Y T
Sbjct: 886  RVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMT 920



 Score =  126 bits (317), Expect(2) = 8e-72
 Identities = 71/128 (55%), Positives = 84/128 (65%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGFRXXXXX----------------PRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYMTQP GF+                     PRQ YK FDS++V   YTRS YD CVY +
Sbjct: 917  IYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYN 976

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            +L    +IYL+LYVDDMLIA+K    I KLKG LSAEFEMKDLG A+KILGMEI RDR+R
Sbjct: 977  RLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRER 1036

Query: 24   GRLCLTQK 1
             +L L+Q+
Sbjct: 1037 RKLFLSQR 1044


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  162 bits (409), Expect(2) = 7e-70
 Identities = 108/273 (39%), Positives = 138/273 (50%), Gaps = 9/273 (3%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLKPPCSQQVENIQIEEPLQGVEFDVAPQLSPDISVSVDIPT 941
            P+  K I+SRDVTFDE+SML+   + + +         GVE  V  Q+            
Sbjct: 1187 PVSSKFIISRDVTFDESSMLRSTTNSREKEESDRMGDHGVEKQVECQV------------ 1234

Query: 940  AMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQD--------SIAAHKPKCH 785
                              D P P   T V DDQ + QD  +D        SIA  + K  
Sbjct: 1235 ------------------DAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYSIATGRTKRQ 1276

Query: 784  IRKPKKYDDMIVAYALPAEVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWEL 605
            I+   +Y + +V++AL         P +Y EA    ES +W  AM +E+ SLHKN TWEL
Sbjct: 1277 IKPNPRYAN-LVSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWEL 1335

Query: 604  AKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSI 428
             K P  +K +GCK V+ KKEG    E  RFKARLVAKG+ Q EG+DYNE FSPVVKHSSI
Sbjct: 1336 VKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSI 1395

Query: 427  RIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            R+                VKTAFLHG+ +E +Y
Sbjct: 1396 RVLLAMVAKSDLELEQLDVKTAFLHGELEETIY 1428



 Score =  132 bits (332), Expect(2) = 7e-70
 Identities = 74/128 (57%), Positives = 81/128 (63%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGFRXXXXX----------------PRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++   YTR  YD CVY  
Sbjct: 1427 IYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHR 1486

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            KL  G +IYLLLYVDDMLIASKN   I KLK QLS EFEMKDLG AKKILGM+I RDRK 
Sbjct: 1487 KLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKA 1546

Query: 24   GRLCLTQK 1
            G+L ++QK
Sbjct: 1547 GKLRVSQK 1554


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  162 bits (409), Expect(2) = 7e-70
 Identities = 108/273 (39%), Positives = 138/273 (50%), Gaps = 9/273 (3%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLKPPCSQQVENIQIEEPLQGVEFDVAPQLSPDISVSVDIPT 941
            P+  K I+SRDVTFDE+SML+   + + +         GVE  V  Q+            
Sbjct: 1208 PVSSKFIISRDVTFDESSMLRSTTNSREKEESDRMGDHGVEKQVECQV------------ 1255

Query: 940  AMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQD--------SIAAHKPKCH 785
                              D P P   T V DDQ + QD  +D        SIA  + K  
Sbjct: 1256 ------------------DAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYSIATGRTKRQ 1297

Query: 784  IRKPKKYDDMIVAYALPAEVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWEL 605
            I+   +Y + +V++AL         P +Y EA    ES +W  AM +E+ SLHKN TWEL
Sbjct: 1298 IKPNPRYAN-LVSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWEL 1356

Query: 604  AKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSI 428
             K P  +K +GCK V+ KKEG    E  RFKARLVAKG+ Q EG+DYNE FSPVVKHSSI
Sbjct: 1357 VKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSI 1416

Query: 427  RIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            R+                VKTAFLHG+ +E +Y
Sbjct: 1417 RVLLAMVAKSDLELEQLDVKTAFLHGELEETIY 1449



 Score =  132 bits (332), Expect(2) = 7e-70
 Identities = 74/128 (57%), Positives = 81/128 (63%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGFRXXXXX----------------PRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++   YTR  YD CVY  
Sbjct: 1448 IYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHR 1507

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            KL  G +IYLLLYVDDMLIASKN   I KLK QLS EFEMKDLG AKKILGM+I RDRK 
Sbjct: 1508 KLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKA 1567

Query: 24   GRLCLTQK 1
            G+L ++QK
Sbjct: 1568 GKLRVSQK 1575


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  167 bits (424), Expect(2) = 1e-68
 Identities = 112/269 (41%), Positives = 148/269 (55%), Gaps = 5/269 (1%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLKPPCSQQVENIQIEEPLQGVEFDVAPQLSPDISVSVDIPT 941
            P  KK+++SR+V F E+ ML    S  V     E+    VE  ++   +P+         
Sbjct: 578  PKTKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGHAPE--------- 628

Query: 940  AMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHIRKPKKY- 764
                  D A +Q  S  +D            D +  Q   + SIA  KPK +I+ P++Y 
Sbjct: 629  ----KEDVAINQDASVIED-----------SDSSAVQQSPKRSIAKDKPKRNIKPPRRYI 673

Query: 763  -DDMIVAYALP-AEVIEDSI-PLTYREAELSSESNRWRDAMEDEMISLHKNDTWELAKLP 593
             +  IVAYAL  AE IE +  P TY EA +S   NRW  AM DEM SL KN TWEL KLP
Sbjct: 674  EEANIVAYALSVAEEIEGNAEPSTYSEAIVSDGCNRWITAMHDEMESLEKNHTWELVKLP 733

Query: 592  KGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSIRIXX 416
            K KK I CK ++ +K+G SP +  R+KARLVAKGY+Q+ G+D+N+ FSPV+KHSSIR   
Sbjct: 734  KEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTLL 793

Query: 415  XXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
                          VKTAFLHG+ +ED+Y
Sbjct: 794  SIVAVHDYELEQMDVKTAFLHGELEEDIY 822



 Score =  122 bits (306), Expect(2) = 1e-68
 Identities = 71/128 (55%), Positives = 82/128 (64%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF+  +++ RS YD CVYL 
Sbjct: 821  IYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYL- 879

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            K+  G  IYLLLYVDDMLIA+K+   I KLK QLS+EFEMKDLG AKKILGMEI R+R  
Sbjct: 880  KVVDGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 939

Query: 24   GRLCLTQK 1
            G+L L+QK
Sbjct: 940  GKLYLSQK 947


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  169 bits (427), Expect(2) = 2e-68
 Identities = 116/276 (42%), Positives = 155/276 (56%), Gaps = 12/276 (4%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLK-------PPCSQQVENIQIEEPLQGVEFDVAPQLSPDIS 962
            P  KK+++SR+V F E+ +L        P  SQ+  ++Q+E  +       AP+   D++
Sbjct: 671  PETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGH---APE-KEDVA 726

Query: 961  VSVDIPTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHI 782
            ++ D P  ++ D DS      S     PK                    SIA  KPK +I
Sbjct: 727  INQDAP--VIEDSDS------SIVHQSPKR-------------------SIAKDKPKRNI 759

Query: 781  RKPKKY--DDMIVAYALP-AEVIEDSI-PLTYREAELSSESNRWRDAMEDEMISLHKNDT 614
            + P++Y  +  IVAYAL  AE IE +  P TY EA +S + NRW  AM DEM SL KN T
Sbjct: 760  KPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHT 819

Query: 613  WELAKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKH 437
            WEL KLPK KK I CK ++ +KEG SP +  R+KARLVAKGY+Q+ G+D+N+ FSPVVKH
Sbjct: 820  WELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKH 879

Query: 436  SSIRIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            SSIR                 VKTAFLHG+ +ED+Y
Sbjct: 880  SSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIY 915



 Score =  120 bits (301), Expect(2) = 2e-68
 Identities = 70/128 (54%), Positives = 82/128 (64%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++ +++  S YD CVYL 
Sbjct: 914  IYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYL- 972

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            K+  G  IYLLLYVDDMLIA+K+   I KLK QLS+EFEMKDLG AKKILGMEI R+R  
Sbjct: 973  KVVDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 1032

Query: 24   GRLCLTQK 1
            G+L L+QK
Sbjct: 1033 GKLYLSQK 1040


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  164 bits (415), Expect(2) = 2e-68
 Identities = 111/276 (40%), Positives = 152/276 (55%), Gaps = 12/276 (4%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLK-------PPCSQQVENIQIEEPLQGVEFDVAPQLSPDIS 962
            P  KK+++SR+V F E+ ML        P  SQ+  ++Q+E  +       AP+   D++
Sbjct: 608  PETKKVVISRNVVFHESIMLHDKPSTNVPVESQEKVSVQVEHLISSGH---APE-KEDVA 663

Query: 961  VSVDIPTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHI 782
            ++ D P       DS                       D +  Q   + SIA  +PK + 
Sbjct: 664  INQDAPVI----EDS-----------------------DSSIVQQSPKRSIAKDRPKRNT 696

Query: 781  RKPKKY--DDMIVAYALP-AEVIEDSI-PLTYREAELSSESNRWRDAMEDEMISLHKNDT 614
            + P++Y  +  IVAYAL  AE IE +  P TY +A +S + NRW  AM DEM SL KN +
Sbjct: 697  KPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHS 756

Query: 613  WELAKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKH 437
            WEL KLPK KK I CK ++ +KEG SP +  R+KARLVAKGY+Q+ G+D+N+ FSPVVKH
Sbjct: 757  WELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKH 816

Query: 436  SSIRIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            SSIR                 VKTAFLHG+ +ED+Y
Sbjct: 817  SSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIY 852



 Score =  125 bits (313), Expect(2) = 2e-68
 Identities = 72/128 (56%), Positives = 84/128 (65%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++ +++ RS YD CVYL 
Sbjct: 851  IYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL- 909

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            K+  G  IYLLLYVDDMLIA+K+   IAKLK QLS+EFEMKDLG AKKILGMEI R+R  
Sbjct: 910  KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 969

Query: 24   GRLCLTQK 1
            G+L L+QK
Sbjct: 970  GKLYLSQK 977


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  157 bits (397), Expect(2) = 5e-68
 Identities = 102/265 (38%), Positives = 146/265 (55%), Gaps = 4/265 (1%)
 Frame = -1

Query: 1111 KKIIMSRDVTFDEASMLKPPCSQQVENIQIEEPLQGVEFDVAPQLSPDISVSVDIPTAMM 932
            +++I+SRDVTF+E ++L       V +      LQG    V  +L   ++ +VD+P++  
Sbjct: 395  RRLILSRDVTFNEDALLSSGKQSSVSSSSTNN-LQGTSEKVELELK-SVAPNVDVPSSST 452

Query: 931  LDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHIRKPKKY-DDM 755
             +         S  DD            D +  Q   + +IA  + +  I+ P +Y DD 
Sbjct: 453  TE---------SSIDD----------HGDDHPIQQQEEYNIARDRTRRQIKLPARYTDDN 493

Query: 754  IVAYALPA--EVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 581
            + AYAL    EV +D  P +Y EA    +S +W  AM +E+ SLHKN+TW L KLPKGK+
Sbjct: 494  LTAYALSIAQEVNDDVEPASYSEAVSCVDSAKWLVAMNEEIESLHKNNTWNLTKLPKGKR 553

Query: 580  AIGCK*VYAKKEGSP-KEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSIRIXXXXXX 404
             + CK +Y KK+G P  E  R KARLV KG+ Q EG+D+NE FSPVV+H+SIRI      
Sbjct: 554  PLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVRHTSIRILLAFVA 613

Query: 403  XXXXXXXXXXVKTAFLHGDSDEDLY 329
                      VKTAFLHG+ +E++Y
Sbjct: 614  LFDLELEQLDVKTAFLHGELEEEIY 638



 Score =  130 bits (328), Expect(2) = 5e-68
 Identities = 69/128 (53%), Positives = 85/128 (66%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++G+ Y+RS YD C+Y  
Sbjct: 637  IYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQ 696

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            + P G +IYLLLYVDDMLIAS++   I+KLK QL+ EFEMK+LG AKKILGMEI RDR+ 
Sbjct: 697  QFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQV 756

Query: 24   GRLCLTQK 1
            G+L L+Q+
Sbjct: 757  GKLFLSQQ 764


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  165 bits (418), Expect(2) = 6e-68
 Identities = 111/276 (40%), Positives = 155/276 (56%), Gaps = 12/276 (4%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLK-------PPCSQQVENIQIEEPLQGVEFDVAPQLSPDIS 962
            P  KK+++SR+V F E+ +L        P  SQ+  ++Q+E  +       AP+   +++
Sbjct: 734  PETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGH---APE-KENVA 789

Query: 961  VSVDIPTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHI 782
            ++ D P  ++ D DS+  Q  S+                          SIA  KPK +I
Sbjct: 790  INQDAP--VIEDSDSSIVQQSSKR-------------------------SIAKDKPKRNI 822

Query: 781  RKPKKY--DDMIVAYALP-AEVIEDSI-PLTYREAELSSESNRWRDAMEDEMISLHKNDT 614
            + P++Y  +  IVAYAL  AE IE +  P TY EA +S + NRW  AM DEM SL KN T
Sbjct: 823  KPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHT 882

Query: 613  WELAKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKH 437
            WE  KLPK KK I CK ++ +KEG SP +  R+KARLVAKGY+Q+ G+D+N+ FSP++KH
Sbjct: 883  WEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKH 942

Query: 436  SSIRIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            SSIR                 VKTAFLHG+ +ED+Y
Sbjct: 943  SSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIY 978



 Score =  122 bits (306), Expect(2) = 6e-68
 Identities = 71/128 (55%), Positives = 83/128 (64%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++ +++ RS YD CVYL 
Sbjct: 977  IYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL- 1035

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            K+  G  IYLLLYVDDMLIA+K+   IAKLK QLS+EF MKDLG AKKILGMEI R+R  
Sbjct: 1036 KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRERHS 1095

Query: 24   GRLCLTQK 1
            G+L L+QK
Sbjct: 1096 GKLYLSQK 1103


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  165 bits (418), Expect(2) = 6e-68
 Identities = 111/276 (40%), Positives = 155/276 (56%), Gaps = 12/276 (4%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLK-------PPCSQQVENIQIEEPLQGVEFDVAPQLSPDIS 962
            P  KK+++SR+V F E+ +L        P  SQ+  ++Q+E  +       AP+   +++
Sbjct: 734  PETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGH---APE-KENVA 789

Query: 961  VSVDIPTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHI 782
            ++ D P  ++ D DS+  Q  S+                          SIA  KPK +I
Sbjct: 790  INQDAP--VIEDSDSSIVQQSSKR-------------------------SIAKDKPKRNI 822

Query: 781  RKPKKY--DDMIVAYALP-AEVIEDSI-PLTYREAELSSESNRWRDAMEDEMISLHKNDT 614
            + P++Y  +  IVAYAL  AE IE +  P TY EA +S + NRW  AM DEM SL KN T
Sbjct: 823  KPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHT 882

Query: 613  WELAKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKH 437
            WE  KLPK KK I CK ++ +KEG SP +  R+KARLVAKGY+Q+ G+D+N+ FSP++KH
Sbjct: 883  WEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKH 942

Query: 436  SSIRIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            SSIR                 VKTAFLHG+ +ED+Y
Sbjct: 943  SSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIY 978



 Score =  122 bits (306), Expect(2) = 6e-68
 Identities = 71/128 (55%), Positives = 83/128 (64%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++ +++ RS YD CVYL 
Sbjct: 977  IYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL- 1035

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            K+  G  IYLLLYVDDMLIA+K+   IAKLK QLS+EF MKDLG AKKILGMEI R+R  
Sbjct: 1036 KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRERHS 1095

Query: 24   GRLCLTQK 1
            G+L L+QK
Sbjct: 1096 GKLYLSQK 1103


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  165 bits (418), Expect(2) = 2e-67
 Identities = 112/278 (40%), Positives = 152/278 (54%), Gaps = 14/278 (5%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLK-------PPCSQQVENIQIEEPLQGVEFDVAPQLSPDIS 962
            P  KK+++SR+V F E+ ML        P  SQ+  ++Q+E  +       AP+   D++
Sbjct: 906  PETKKVVISRNVVFHESVMLHDKPSTNVPVESQEKASVQVEHLISSGH---APE-KEDVA 961

Query: 961  VSVDIPTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQG--QDHVQDSIAAHKPKC 788
            ++ D P                             V +D N    Q   + SIA  +PK 
Sbjct: 962  INQDEP-----------------------------VIEDSNSSIVQQSPKRSIAKDRPKR 992

Query: 787  HIRKPKKY--DDMIVAYALP-AEVIEDSI-PLTYREAELSSESNRWRDAMEDEMISLHKN 620
            +I+ P++Y  +  IVAYAL  AE IE +  P TY EA +S + NRW  AM DEM SL KN
Sbjct: 993  NIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKN 1052

Query: 619  DTWELAKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVV 443
             TWEL KLPK KK I CK ++ +KEG S  +  R+KARL+AKGY+Q+ G+D+N+ FSPVV
Sbjct: 1053 HTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVV 1112

Query: 442  KHSSIRIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            KHSSIR                 VKTAFLHG+ +ED+Y
Sbjct: 1113 KHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIY 1150



 Score =  120 bits (301), Expect(2) = 2e-67
 Identities = 71/128 (55%), Positives = 82/128 (64%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++ +++ RS YD CVYL 
Sbjct: 1149 IYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL- 1207

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            K+  G  IYLLLYVDDMLIA+K+   IAKLK QLS+EFEMKDLG AKKILGMEI R R  
Sbjct: 1208 KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHS 1267

Query: 24   GRLCLTQK 1
             +L L+QK
Sbjct: 1268 FKLYLSQK 1275


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  163 bits (412), Expect(2) = 2e-67
 Identities = 112/276 (40%), Positives = 153/276 (55%), Gaps = 12/276 (4%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASMLK-------PPCSQQVENIQIEEPLQGVEFDVAPQLSPDIS 962
            P  KK+++SR+V F E+ +L        P  SQ+  ++Q+E  +       AP+   D++
Sbjct: 441  PETKKVVISRNVVFHESVILHDKPSTNVPVESQEKTSVQVEHLISSGH---APE-KEDVA 496

Query: 961  VSVDIPTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHI 782
            ++ D P  ++ D DS      S     PK                    SIA  KPK +I
Sbjct: 497  INQDAP--VIQDSDS------SIVHQSPKR-------------------SIAKDKPKRNI 529

Query: 781  RKPKKY--DDMIVAYALP-AEVIEDSI-PLTYREAELSSESNRWRDAMEDEMISLHKNDT 614
            + P++Y  +  IVAYAL  AE IE +  P  Y EA +S + NRW   M DEM SL KN T
Sbjct: 530  KPPRRYIEEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESLEKNHT 589

Query: 613  WELAKLPKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKH 437
            WEL KLPK KK+I CK ++ +KEG SP +  R+KARLVAKGY+Q+  +D+N+ FSP+VKH
Sbjct: 590  WELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVKH 649

Query: 436  SSIRIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            SSIR                 VKTAFLHG+ +ED+Y
Sbjct: 650  SSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIY 685



 Score =  122 bits (307), Expect(2) = 2e-67
 Identities = 71/128 (55%), Positives = 83/128 (64%), Gaps = 16/128 (12%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FDSF++ +++ RS YD CVYL 
Sbjct: 684  IYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYL- 742

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
            K+  G  IYLLLYVDDMLIA+K+   I KLK QLS+EFEMKDLG AKKILGMEI R+R  
Sbjct: 743  KVVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 802

Query: 24   GRLCLTQK 1
            G+L L+QK
Sbjct: 803  GKLYLSQK 810


>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
          Length = 1034

 Score =  186 bits (471), Expect(2) = 2e-65
 Identities = 111/215 (51%), Positives = 137/215 (63%), Gaps = 10/215 (4%)
 Frame = -1

Query: 937  MMLDRDSAGDQSVSETDD*PKPEVDTEVP-------DDQNQGQDHVQ--DSIAAHKPKCH 785
            MM + DS  D + S T    + E   + P       D++   Q+ +Q  DSIA  +P+  
Sbjct: 467  MMKNNDSQKDNTTSGTLQQVELEKVNDDPANIEGTNDEEVSTQELLQQHDSIAYRRPRRE 526

Query: 784  IRKPKKYDDMIVAYALPAEVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWEL 605
            IR P ++DDM VAYAL   + +D +P TY +A  +S+S +W+ AM +EM SLHKN TWEL
Sbjct: 527  IRMPARFDDM-VAYALL--IADDDVPSTYTKARSNSDSVKWKQAMNEEMQSLHKNRTWEL 583

Query: 604  AKLPKGKKAIGCK*VYAKKEGSP-KEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSI 428
              LPKGKKAIGCK VYAKKEG P K  VR+KARLVAKGYAQ EG+DYNE FSPVVKHSSI
Sbjct: 584  VTLPKGKKAIGCKWVYAKKEGFPDKNEVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSI 643

Query: 427  RIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLYDT 323
            +I                VKTAFLHGD +E +Y T
Sbjct: 644  QILLALVAQYDLELVQLDVKTAFLHGDLEEKIYMT 678



 Score = 93.6 bits (231), Expect(2) = 2e-65
 Identities = 48/68 (70%), Positives = 56/68 (82%)
 Frame = -2

Query: 204 KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
           KL  G ++YLLLYVDDMLIASK+ + I +LK QL+ EFEMKDLGEAKKILGMEI RDR  
Sbjct: 685 KLQEGFFVYLLLYVDDMLIASKSKVEIERLKTQLNLEFEMKDLGEAKKILGMEICRDRAH 744

Query: 24  GRLCLTQK 1
           GR+ L+QK
Sbjct: 745 GRVSLSQK 752


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  159 bits (402), Expect(2) = 3e-65
 Identities = 106/270 (39%), Positives = 148/270 (54%), Gaps = 10/270 (3%)
 Frame = -1

Query: 1108 KIIMSRDVTFDEASMLKPPCSQQVENIQIEEPLQGVEF-DVAPQLSPDISVSVDIPTAMM 932
            K I+SRDVTFDE++M                  Q  EF D+A     D+  +  +     
Sbjct: 804  KFIISRDVTFDESAMFG----------------QRKEFGDLAGTSKTDLGANQKVE---- 843

Query: 931  LDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHIRKPKKYDDMI 752
             + D+  +  V +T +  +P +      DQN  Q     SIAAH+P+  IR+P +Y D +
Sbjct: 844  FEVDAPMENGVDDTSE-EQPVI------DQNDSQ-----SIAAHRPRREIRRPMRYVDCV 891

Query: 751  -------VAYALP-AEVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWELAKL 596
                   VA+AL  AE I    P +Y+EA  S +S +W  +M+DEM SL KN TWEL  L
Sbjct: 892  SANITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPL 951

Query: 595  PKGKKAIGCK*VYAKKEG-SPKEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSIRIX 419
            P+G K + CK ++  K+G S  E  ++K+RLVAKG++Q EG+DYNE FSPVVKH SIR+ 
Sbjct: 952  PEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVL 1011

Query: 418  XXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
                           VKTAFLHG+ +E++Y
Sbjct: 1012 LAMVSVFNLELDQLDVKTAFLHGNLEEEIY 1041



 Score =  119 bits (299), Expect(2) = 3e-65
 Identities = 67/118 (56%), Positives = 74/118 (62%), Gaps = 16/118 (13%)
 Frame = -2

Query: 336  IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
            IYM QP GF                      PRQ YK FD+F+V  E+ R+ YD CVY  
Sbjct: 1040 IYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQYDSCVYFK 1099

Query: 204  KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDR 31
             LP G +IYLLLYVDDMLIA+KN   I KLK  LS+EFEMKDLG AKKILGMEI RDR
Sbjct: 1100 TLPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAKKILGMEIWRDR 1157


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 530

 Score =  152 bits (385), Expect(2) = 2e-63
 Identities = 102/275 (37%), Positives = 142/275 (51%), Gaps = 14/275 (5%)
 Frame = -1

Query: 1111 KKIIMSRDVTFDEASMLKPPCSQQVENIQIEEPL-----QGVEFDVAPQLSPDISVSVDI 947
            KKI++SRDVTF+E++M      ++VEN+   +       Q VEF+V      +++     
Sbjct: 84   KKIVISRDVTFNESAMFGQ--KEEVENLAGNKSTNKGVHQKVEFEVEDSNKENLN----- 136

Query: 946  PTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHIRKPKK 767
                                           P +Q+        SIA  + +  IRKP +
Sbjct: 137  -------------------------------PVEQSSNVQEEPQSIATRRTRREIRKPTR 165

Query: 766  YDDMI-------VAYAL-PAEVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTW 611
            Y D+        VAYAL   E ++   P +Y+EA  S E+++W  AM++EM SL KN TW
Sbjct: 166  YADVTNVVDTNSVAYALLVGENLDSDEPKSYKEAIQSKEASKWLIAMDEEMQSLKKNQTW 225

Query: 610  ELAKLPKGKKAIGCK*VYAKKEGSP-KEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHS 434
            EL  LP+G K +GCK V  +KEG P  E  RFKARLVAKG++Q EG+DY+E FSPVVKH 
Sbjct: 226  ELVPLPRGVKPVGCKWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGIDYHEVFSPVVKHK 285

Query: 433  SIRIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            +IR+                VK AFLHG+ +E +Y
Sbjct: 286  TIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQVY 320



 Score =  120 bits (301), Expect(2) = 2e-63
 Identities = 66/129 (51%), Positives = 80/129 (62%), Gaps = 16/129 (12%)
 Frame = -2

Query: 339 RIYMTQPTGFRXXXXX----------------PRQ*YKCFDSFIVGKEYTRSPYDPCVYL 208
           ++YM+QP GF                      PRQ YK FD+F++   + R+ +D CVY 
Sbjct: 318 QVYMSQPDGFLEVGKKNHVCLLKKSLYGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYS 377

Query: 207 HKLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRK 28
            KL  G YIYLLLYVDDMLIA+K+   I  LK  LS+EFEMKDLG AKKILGMEI RDR 
Sbjct: 378 RKLSDGSYIYLLLYVDDMLIAAKSKTDIDALKAMLSSEFEMKDLGTAKKILGMEIWRDRN 437

Query: 27  RGRLCLTQK 1
            G L ++QK
Sbjct: 438 AGLLYVSQK 446


>gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1308

 Score =  155 bits (392), Expect(2) = 5e-62
 Identities = 91/197 (46%), Positives = 116/197 (58%), Gaps = 4/197 (2%)
 Frame = -1

Query: 910  DQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHIRKPKKYDDM--IVAYAL 737
            D  +    D  K   + E+P+  + GQ     SIA  +P+  I+ P ++ D   I AY  
Sbjct: 720  DVQIEVESDGMKNSDEEEMPESSSHGQSPGY-SIAKERPRRQIKPPLRFRDEEDISAYVF 778

Query: 736  PAEVIEDSI-PLTYREAELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAIGCK*V 560
             A  +EDS  PLTY EA  S +S RW+ AM++EM SLHKN TW L   PKG+K + CK +
Sbjct: 779  MAAELEDSTEPLTYNEAIASEDSERWQVAMQEEMDSLHKNQTWVLVDKPKGQKIVTCKWI 838

Query: 559  YAKKEGSP-KEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSIRIXXXXXXXXXXXXX 383
            +  KEG P  EG R+KARLVAKG+ Q  G+DYNE FSPVVKHSSIR+             
Sbjct: 839  FKLKEGIPGVEGPRYKARLVAKGFTQRAGIDYNEVFSPVVKHSSIRVILSLTAVMGMELE 898

Query: 382  XXXVKTAFLHGDSDEDL 332
               VKTAFLHG  DE++
Sbjct: 899  QLDVKTAFLHGYLDEEI 915



 Score =  112 bits (281), Expect(2) = 5e-62
 Identities = 57/96 (59%), Positives = 69/96 (71%)
 Frame = -2

Query: 291  PRQ*YKCFDSFIVGKEYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSMAIAKLK 112
            PRQ YK FD ++V   + RS YD CVY  +   G+Y+YLLLYVDDML+A ++S  I   K
Sbjct: 946  PRQWYKRFDEYMVSNSFKRSSYDACVYFKEYCPGKYVYLLLYVDDMLVACQDSEEIRNTK 1005

Query: 111  GQLSAEFEMKDLGEAKKILGMEIERDRKRGRLCLTQ 4
              L AEF+MK+LGEAKKILGMEI RD+ RG L LTQ
Sbjct: 1006 DLLMAEFDMKELGEAKKILGMEITRDKGRGILRLTQ 1041


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  142 bits (357), Expect(2) = 6e-62
 Identities = 96/273 (35%), Positives = 139/273 (50%), Gaps = 9/273 (3%)
 Frame = -1

Query: 1120 PIDKKIIMSRDVTFDEASML---KPPCSQQVENIQIEEPLQGVEFDVAPQLSPDISVSVD 950
            P  +KI  SR+VTF+E  ML   K       +    E+  + VEF+    +     +  +
Sbjct: 343  PESRKIFHSRNVTFNENGMLSSGKDTVVPSTDTGDQEDVREKVEFETEAPI-----LETN 397

Query: 949  IPTAMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHIRKPK 770
            IP +     D    + +S     P           Q +G      S+A   P+   RKP 
Sbjct: 398  IPNSSTTQEDEVTAEQMSPRQHPP-----------QRRGLPQPW-SMAQELPQQRPRKPT 445

Query: 769  KY---DDMIVAYALPA--EVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWEL 605
            +    +   +AYAL    E+ ED  P  Y EA    +S +W  AM++E+ SL KN+TW+L
Sbjct: 446  QRLITESANIAYALTVAQEMGEDGEPKNYSEAISGDDSAKWTAAMQEEVESLLKNETWDL 505

Query: 604  AKLPKGKKAIGCK*VYAKKEGSP-KEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSI 428
              LP+GK+ I CK ++ +KEG P  E  R+KAR V +G+ Q EG+D+NE FSPVV+HSSI
Sbjct: 506  VMLPEGKRVISCKWIFKRKEGIPGVENARYKARFVVRGFDQQEGIDFNEVFSPVVRHSSI 565

Query: 427  RIXXXXXXXXXXXXXXXXVKTAFLHGDSDEDLY 329
            R+                VKTAFLHG+ +E++Y
Sbjct: 566  RVLLALVALYDLELEQLDVKTAFLHGNLEEEIY 598



 Score =  125 bits (315), Expect(2) = 6e-62
 Identities = 62/97 (63%), Positives = 75/97 (77%)
 Frame = -2

Query: 291 PRQ*YKCFDSFIVGKEYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSMAIAKLK 112
           PRQ YK FDSF+ G  Y+RS YD CVY  KL  G  +YLLLYVDDMLIA+++   + KLK
Sbjct: 628 PRQWYKRFDSFMTGHGYSRSSYDNCVYFQKLSDGSLVYLLLYVDDMLIAARDKTLVDKLK 687

Query: 111 GQLSAEFEMKDLGEAKKILGMEIERDRKRGRLCLTQK 1
            QL++EF+MKDLG AKKILGMEI RDR+ G+L L+QK
Sbjct: 688 VQLNSEFDMKDLGPAKKILGMEINRDRQAGKLFLSQK 724


>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
 gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
          Length = 324

 Score =  190 bits (483), Expect(2) = 2e-61
 Identities = 117/267 (43%), Positives = 152/267 (56%), Gaps = 4/267 (1%)
 Frame = -1

Query: 1111 KKIIMSRDVTFDEASMLKPPCSQQVENIQIEEPLQGVEFD---VAPQLSPDISVSVDIPT 941
            KK+I SRDVTFDE++M+        +N   E   + VEF+   + P    D   + D P 
Sbjct: 3    KKVIFSRDVTFDESAMVNKVTEDTKQN---EGASKQVEFEGKFIFPTQEADEETNEDYPL 59

Query: 940  AMMLDRDSAGDQSVSETDD*PKPEVDTEVPDDQNQGQDHVQDSIAAHKPKCHIRKPKKYD 761
                             +  P  E+ T+ P  Q        +SIA  +PK  I KP +  
Sbjct: 60   -----------------EGEPVEEIPTQEPQQQ-------LESIATSRPKRTITKPVR-- 93

Query: 760  DMIVAYALPAEVIEDSIPLTYREAELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKK 581
             +I   A    ++ D +P TY++A  SSE ++WR AM +EM SL++N TW+LA LPKGKK
Sbjct: 94   -LIETVACATSIVADDVPTTYKDAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKK 152

Query: 580  AIGCK*VYAKKEGSPKE-GVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSIRIXXXXXX 404
            AIGCK V+AKKEG P +  VR+KARLVAKGYAQ EG+DYNE FSPVVKHSSIRI      
Sbjct: 153  AIGCKWVFAKKEGFPNQVDVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIMLALVA 212

Query: 403  XXXXXXXXXXVKTAFLHGDSDEDLYDT 323
                      VKTAFLHG+ +E++Y T
Sbjct: 213  QLDLELVQMDVKTAFLHGNLEEEIYMT 239



 Score = 75.5 bits (184), Expect(2) = 2e-61
 Identities = 42/83 (50%), Positives = 47/83 (56%), Gaps = 16/83 (19%)
 Frame = -2

Query: 336 IYMTQPTGFRXXXXX----------------PRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
           IYMTQP GF+                      RQ YK FD F++ + Y RS YD CVYL 
Sbjct: 236 IYMTQPEGFKVAGKENMVCKLEKSLYGLKQSSRQWYKRFDEFMLRQGYKRSKYDHCVYLR 295

Query: 204 KLPGGEYIYLLLYVDDMLIASKN 136
           KL  G +IYLLLYVDDM IASKN
Sbjct: 296 KLKDGSFIYLLLYVDDMFIASKN 318


>ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281003 [Oryza sativa
           Japonica Group]
          Length = 651

 Score =  155 bits (392), Expect(2) = 7e-61
 Identities = 91/186 (48%), Positives = 118/186 (63%), Gaps = 7/186 (3%)
 Frame = -1

Query: 865 DTEVPDDQNQG--QDHVQDSIAAHKPKCHIRKPKKY--DDMIVAYALP-AEVIEDSI-PL 704
           D  V +D +    Q   + SIA  +PK + + P++Y  +  IVAYAL  AE IE +  P 
Sbjct: 319 DAPVIEDSDSSIVQQSPKRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPS 378

Query: 703 TYREAELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SPKEG 527
           TY +A +S + NRW  AM DEM SL KN +WEL KLPK KK I CK ++ +KEG SP + 
Sbjct: 379 TYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDE 438

Query: 526 VRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSIRIXXXXXXXXXXXXXXXXVKTAFLHGD 347
            R+KARLVAKGY+Q+ G+D+N+ FSPVVKHSSIR                 VKTAFLHG+
Sbjct: 439 ARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGE 498

Query: 346 SDEDLY 329
            +ED+Y
Sbjct: 499 LEEDIY 504



 Score =  108 bits (271), Expect(2) = 7e-61
 Identities = 64/120 (53%), Positives = 75/120 (62%), Gaps = 16/120 (13%)
 Frame = -2

Query: 336 IYMTQPTGF----------------RXXXXXPRQ*YKCFDSFIVGKEYTRSPYDPCVYLH 205
           IYM QP GF                      PRQ YK FDSF++ +++ RS YD CVYL 
Sbjct: 503 IYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL- 561

Query: 204 KLPGGEYIYLLLYVDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKR 25
           K+  G  IYLLLYVDDMLIA+K+   IAKLK QLS+EFEMKDLG AKKIL    + DR+R
Sbjct: 562 KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILDFAGDLDRRR 621


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1138

 Score =  157 bits (396), Expect(2) = 3e-60
 Identities = 92/189 (48%), Positives = 117/189 (61%), Gaps = 6/189 (3%)
 Frame = -1

Query: 877  KPEVDTEVPDDQNQG-QDHVQDSIAAHKPKCHIRKPKKY--DDMIVAYALP-AEVIEDSI 710
            KP  +  +   +    Q   + SIA  KPK + R P++Y  +  IVAYAL  AE IE + 
Sbjct: 590  KPSTNVPIESQEKASVQQSPKHSIAKDKPKRNTRPPQRYIEEANIVAYALSVAEEIEGNA 649

Query: 709  -PLTYREAELSSESNRWRDAMEDEMISLHKNDTWELAKLPKGKKAIGCK*VYAKKEG-SP 536
             P TY EA +S + NRW  AM DEM SL KN TW+L KLPK KK I CK ++ +KEG SP
Sbjct: 650  EPSTYSEAIVSDDCNRWITAMHDEMDSLEKNHTWKLVKLPKEKKLIHCKWIFKRKEGMSP 709

Query: 535  KEGVRFKARLVAKGYAQLEGVDYNEAFSPVVKHSSIRIXXXXXXXXXXXXXXXXVKTAFL 356
             +  R+KA LVAKGY+Q+ G+D+N+ FSPVVKHSSIR                 VKTAFL
Sbjct: 710  TDEARYKAMLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELDQMDVKTAFL 769

Query: 355  HGDSDEDLY 329
            HG+ +ED+Y
Sbjct: 770  HGELEEDIY 778



 Score =  105 bits (262), Expect(2) = 3e-60
 Identities = 64/115 (55%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
 Frame = -2

Query: 336  IYMTQPTGFRXXXXXPRQ*YKCFDSFIVGKE---YTRSPYDPCVYLHKLPGGEYIYLLLY 166
            IYM QP GF                 I GKE   + RS YD CVY  K+  G  IYLLLY
Sbjct: 777  IYMEQPEGF----------------VIPGKENLKFRRSNYDSCVY-PKVVDGSAIYLLLY 819

Query: 165  VDDMLIASKNSMAIAKLKGQLSAEFEMKDLGEAKKILGMEIERDRKRGRLCLTQK 1
            VDDMLIA+K+   IAKLK QLS+EFEMKDLG AKKILG+EI ++R  G+L L+QK
Sbjct: 820  VDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGIEITKERHSGKLYLSQK 874