BLASTX nr result

ID: Ophiopogon25_contig00031578 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00031578
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011468150.1| PREDICTED: splicing factor 3A subunit 2 isof...    57   2e-06
dbj|GAY65052.1| hypothetical protein CUMW_238280 [Citrus unshiu]       54   2e-06
gb|AHI90798.1| hydroxyproline-rich glycoprotein family protein, ...    52   3e-06
gb|AHG12687.1| hydroxyproline-rich glycoprotein family protein, ...    52   5e-06
gb|AFD50234.1| hydroxyproline-rich glycoprotein family protein, ...    52   5e-06
gb|PNX55840.1| splicing factor 3A subunit 2-like protein [Trifol...    54   5e-06
ref|XP_006493554.1| PREDICTED: splicing factor 3A subunit 2-like...    54   8e-06
ref|XP_020262448.1| splicing factor 3A subunit 2 [Asparagus offi...    54   1e-05
gb|ERN11374.1| hypothetical protein AMTR_s00176p00038570 [Ambore...    52   1e-05

>ref|XP_011468150.1| PREDICTED: splicing factor 3A subunit 2 isoform X2 [Fragaria vesca
           subsp. vesca]
          Length = 322

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 29/40 (72%)
 Frame = +1

Query: 271 HIDRSDDPHHLHPLIQGKRHQTNLAKRAAREAKDAPAQPQ 390
           H  R     H  P  +GKRHQTNLAKRAAREAKDAPAQPQ
Sbjct: 32  HRSRQRSLLHAQPSRKGKRHQTNLAKRAAREAKDAPAQPQ 71


>dbj|GAY65052.1| hypothetical protein CUMW_238280 [Citrus unshiu]
          Length = 112

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +1

Query: 316 QGKRHQTNLAKRAAREAKDAPAQPQ 390
           QGKRHQTNLAKRAAREAKDAPAQPQ
Sbjct: 72  QGKRHQTNLAKRAAREAKDAPAQPQ 96


>gb|AHI90798.1| hydroxyproline-rich glycoprotein family protein, partial
           [Micromeria hyssopifolia]
          Length = 56

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +1

Query: 316 QGKRHQTNLAKRAAREAKDAPAQPQ 390
           QGKRHQTNLAKRAAREAK+APAQPQ
Sbjct: 21  QGKRHQTNLAKRAAREAKEAPAQPQ 45


>gb|AHG12687.1| hydroxyproline-rich glycoprotein family protein, partial [Origanum
           sp. PP-2014]
          Length = 82

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +1

Query: 316 QGKRHQTNLAKRAAREAKDAPAQPQ 390
           QGKRHQTNLAKRAAREAK+APAQPQ
Sbjct: 21  QGKRHQTNLAKRAAREAKEAPAQPQ 45


>gb|AFD50234.1| hydroxyproline-rich glycoprotein family protein, partial [Mentha
           spicata]
 gb|AFN16168.1| hydroxyproline-rich glycoprotein family protein, partial
           [Micromeria varia]
          Length = 82

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +1

Query: 316 QGKRHQTNLAKRAAREAKDAPAQPQ 390
           QGKRHQTNLAKRAAREAK+APAQPQ
Sbjct: 21  QGKRHQTNLAKRAAREAKEAPAQPQ 45


>gb|PNX55840.1| splicing factor 3A subunit 2-like protein [Trifolium pratense]
          Length = 149

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +1

Query: 316 QGKRHQTNLAKRAAREAKDAPAQPQ 390
           QGKRHQTNLAKRAAREAKDAPAQPQ
Sbjct: 72  QGKRHQTNLAKRAAREAKDAPAQPQ 96


>ref|XP_006493554.1| PREDICTED: splicing factor 3A subunit 2-like [Citrus sinensis]
          Length = 182

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +1

Query: 316 QGKRHQTNLAKRAAREAKDAPAQPQ 390
           QGKRHQTNLAKRAAREAKDAPAQPQ
Sbjct: 72  QGKRHQTNLAKRAAREAKDAPAQPQ 96


>ref|XP_020262448.1| splicing factor 3A subunit 2 [Asparagus officinalis]
          Length = 193

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +1

Query: 316 QGKRHQTNLAKRAAREAKDAPAQPQ 390
           QGKRHQTNLAKRAAREAKDAPAQPQ
Sbjct: 28  QGKRHQTNLAKRAAREAKDAPAQPQ 52


>gb|ERN11374.1| hypothetical protein AMTR_s00176p00038570 [Amborella trichopoda]
          Length = 114

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +1

Query: 316 QGKRHQTNLAKRAAREAKDAPAQPQ 390
           QGKRHQTNLAKRAAREAK+APAQPQ
Sbjct: 72  QGKRHQTNLAKRAAREAKEAPAQPQ 96


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