BLASTX nr result

ID: Ophiopogon25_contig00004886 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00004886
         (539 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241962.1| transcription initiation factor TFIID subuni...    74   4e-13
ref|XP_020099151.1| transcription initiation factor TFIID subuni...    58   4e-07
ref|XP_018685954.1| PREDICTED: transcription initiation factor T...    57   1e-06
ref|XP_020590619.1| transcription initiation factor TFIID subuni...    56   3e-06
ref|XP_020695862.1| transcription initiation factor TFIID subuni...    55   3e-06
ref|XP_009414576.1| PREDICTED: transcription initiation factor T...    55   4e-06
ref|XP_020695860.1| transcription initiation factor TFIID subuni...    55   5e-06
ref|XP_020695861.1| transcription initiation factor TFIID subuni...    55   7e-06

>ref|XP_020241962.1| transcription initiation factor TFIID subunit 7 isoform X1
           [Asparagus officinalis]
 ref|XP_020241963.1| transcription initiation factor TFIID subunit 7 isoform X2
           [Asparagus officinalis]
          Length = 196

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
 Frame = -1

Query: 539 GTVENVETAEVGPIG--RKAAPAPATKPEVVPVEAPATGGEPERSDSDDSMEQEN 381
           GTVEN +  E   IG  +KAA  PA KPEV+PVEAP TGGEPE+SDSDDSM+ EN
Sbjct: 142 GTVENADYNEPASIGDRKKAAAGPAAKPEVIPVEAPPTGGEPEKSDSDDSMDPEN 196


>ref|XP_020099151.1| transcription initiation factor TFIID subunit 7 [Ananas comosus]
          Length = 190

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 35/54 (64%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = -1

Query: 539 GTVENVETA-EVGPIGRKAAPAPATKPEVVPVEAPATGGEPERSDSDDSMEQEN 381
           GTVENV T  E G   RKAAP PA+KP+  P EA    GEPERSDSD+SME EN
Sbjct: 141 GTVENVGTVPEEGANRRKAAPTPASKPDA-PAEA---AGEPERSDSDESMEPEN 190


>ref|XP_018685954.1| PREDICTED: transcription initiation factor TFIID subunit 7-like
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 203

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = -1

Query: 539 GTVENVETA--EVGPIGRKAAPAPATKPEVVPVEAPATGGEPERSDSDDSMEQEN 381
           GTVENVET   E G   RK AP  A KP+ V V++   GGEPERSDSDDS+E E+
Sbjct: 151 GTVENVETVVPEAGSQRRKNAPVAAPKPDEVHVKS--AGGEPERSDSDDSLEPES 203


>ref|XP_020590619.1| transcription initiation factor TFIID subunit 7 isoform X1
           [Phalaenopsis equestris]
 ref|XP_020590620.1| transcription initiation factor TFIID subunit 7 isoform X1
           [Phalaenopsis equestris]
          Length = 192

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/53 (56%), Positives = 33/53 (62%)
 Frame = -1

Query: 539 GTVENVETAEVGPIGRKAAPAPATKPEVVPVEAPATGGEPERSDSDDSMEQEN 381
           GTVE  +        RK A  PATKP+V+P E     GEPERSDSDDSME EN
Sbjct: 141 GTVERSQPDFANGERRKIAQVPATKPDVIPTET-VKDGEPERSDSDDSMEHEN 192


>ref|XP_020695862.1| transcription initiation factor TFIID subunit 7-like isoform X3
           [Dendrobium catenatum]
 ref|XP_020695863.1| transcription initiation factor TFIID subunit 7-like isoform X3
           [Dendrobium catenatum]
          Length = 192

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 29/53 (54%), Positives = 33/53 (62%)
 Frame = -1

Query: 539 GTVENVETAEVGPIGRKAAPAPATKPEVVPVEAPATGGEPERSDSDDSMEQEN 381
           GTV+  +  +     RK A  PA KP+VVP E    GG PERSDSDDSME EN
Sbjct: 141 GTVDRSQADDANVERRKTAQVPAVKPDVVPTET-VGGGGPERSDSDDSMENEN 192


>ref|XP_009414576.1| PREDICTED: transcription initiation factor TFIID subunit 7-like
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 193

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = -1

Query: 539 GTVENVETA--EVGPIGRKAAPAPATKPEVVPVEAPATGGEPERSDSDDSMEQEN 381
           GTVENVET   E G   +K AP  A KP+ V V++   GGEPERSDSDDS+E E+
Sbjct: 141 GTVENVETVVPEAGGQRKKNAPVAAPKPDEVHVKS--AGGEPERSDSDDSLEPES 193


>ref|XP_020695860.1| transcription initiation factor TFIID subunit 7-like isoform X1
           [Dendrobium catenatum]
          Length = 231

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/53 (54%), Positives = 33/53 (62%)
 Frame = -1

Query: 539 GTVENVETAEVGPIGRKAAPAPATKPEVVPVEAPATGGEPERSDSDDSMEQEN 381
           GTV+  +  +     RK A  PA KP+VVP E    GG PERSDSDDSME EN
Sbjct: 180 GTVDRSQADDANVERRKTAQVPAVKPDVVPTET-VGGGGPERSDSDDSMENEN 231


>ref|XP_020695861.1| transcription initiation factor TFIID subunit 7-like isoform X2
           [Dendrobium catenatum]
          Length = 229

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 31/53 (58%), Positives = 34/53 (64%)
 Frame = -1

Query: 539 GTVENVETAEVGPIGRKAAPAPATKPEVVPVEAPATGGEPERSDSDDSMEQEN 381
           GTV+  + A V    RK A  PA KP+VVP E    GG PERSDSDDSME EN
Sbjct: 180 GTVDKADDANVER--RKTAQVPAVKPDVVPTETVGGGG-PERSDSDDSMENEN 229


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